Resource Type:
Polypeptide
Name:
XM_017383695.1
Identifier:
XM_017383695.1-protein
Sequence:
METYHRRRLRSAPCSESNNNQMMKRQEAHTFLDSSQSPTLRRQLLQTNED
QGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYP
SIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDN
NYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKF
INRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEER
EYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQSNKKSRRNKCKKMIVGS
SINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGL
LDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQD
PYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSNFKEEL
KKVRREMDEQFTKKIQEEIWSLQVQSSAPWKSDFESALVQVNKQEKQLTD
ISDTITGMKDQMGTLSSMVELASKTTDCCAEKERNHAALERCHALALKES
ASTGEKTAAEEKAAKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEV
EDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKT
ARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDGAFSTAATKR
HNVSTCV
Sequence Length:
707
Sequence Checksum:
a099503014038995119e9f760775ab9f
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017383695.1, derives from mRNA, XM_017383695.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EMR0 ((Uncharacterized protein {ECO:0000313|EMBL:THG17949.1}))
HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0
Identity = 363/735 (49.39%), Postives = 488/735 (66.39%), Query Frame = 0
Match: A0A4S4EMR0 ((Uncharacterized protein {ECO:0000313|EMBL:THG17949.1}))
HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0
Identity = 363/735 (49.39%), Postives = 488/735 (66.39%), Query Frame = 0
Query: 23 MKRQEAHTFLDSSQSPTLRRQLLQTNE-----DQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWL-IKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRET--QSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSA--------------PWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMV-----ELASK----TTDCCAEKERNHAALERCHALALKESA-------STGEKTAAEEKAAKLQKLKSGFRICKPQGTFLWPNMGASN-----------GSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPY--HHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDT---DGAFSTAATKR 700
+KRQE +D +Q+P L R +L T++ I + EVG VYE+DH LP RTPVQLK IRVVMV+EKTELNVSVR+PSI SL Y S N+ + ++YP LDE FVMGT LA KVL R+I +QEF + FWL I NS + + ++++ T +S+LK NGM+RWG+RRQV+FI + + +PQSS+S V+G+KE E E +E+ + E ++E+ +D E E T+E K+ KR +R AKKVKRE Q NK +N CK++ ++ + +RWSA+RYKLAE+NLLEVMKSKGA+F SPILRP+LR EARKRIGDTGLLDHLLKH+AGK+APGG +RFRRRHNA+G MEYWLESADLV +R+EAGVQDPYWTPPPGW GDCP+QDP+CA EL+ LK+E K++RDME++VS EEL K+RREM E + K EE ++ V + + P+KSD +S+ + + K ++QL IS+ ++ +++++ L S V +L S T+CC EKE+ E A + E+TAAE+KAAK+Q+LKSGFRICKPQGTFLWPNM ++N SS +V +VEDL +V TPPSVSSSTA APPQLP+ HHHH P+SP++P+ ERRAVTVTV + + + ++T ++ +K++++L+NLND P T DG T +T++
Sbjct: 3 LKRQEQG--VDGAQTPPLARHVLPTSDCTIPSHSNIETQEIEVGSVYEIDHTKLPPRTPVQLKCIRVVMVSEKTELNVSVRFPSIESLQRYFS-NR--TREMYPELDERFVMGTTLAEKVLFRKIPSQEFAEKKQSNEFWLEICNSV--SGFGDVISRKSGT-CVSELKCNGMIRWGVRRQVRFIGKHRE----NPQSSSSIVRGAKEANEEEEEEEAEVEEEEEEEDDKEAVTEETNEIGKR--KRSSRLVR----NAKKVKREKRRQINKPKTKNSCKQIAVLKNPQDRWSADRYKLAERNLLEVMKSKGAVFGSPILRPELRAEARKRIGDTGLLDHLLKHMAGKVAPGGSDRFRRRHNAEGAMEYWLESADLVDIRREAGVQDPYWTPPPGWKQGDCPTQDPICAMELKQLKKETTKLERDMEEMVSKKQMDEELAKLRREMLELLSIKQNEESQAIVVSNPSATSQNLDLDTSLLVPFKSDLDSSFITLEKYKEQLMVISEYVSRIEEEIKKLKSKVGEEETKLDSSALMVATECCTEKEKKKVGENGKQQEVGTEGADNQSKTNTAAERTAAEQKAAKIQRLKSGFRICKPQGTFLWPNMASNNNKNSNANTSMLSSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPFHRHHHHHPSSPVKPLAERRAVTVTV--SAIGNPNVSTTTTTTTTTTSTITNKTSSTLLNLNDFPTTNPGDGFCGTPSTRQ 717
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I456 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5959813.1}))
HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0
Identity = 363/737 (49.25%), Postives = 489/737 (66.35%), Query Frame = 0
Match: A0A7J7I456 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5959813.1}))
HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0
Identity = 363/737 (49.25%), Postives = 489/737 (66.35%), Query Frame = 0
Query: 23 MKRQEAHTFLDSSQSPTLRRQLLQTNEDQGI-------GEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWL-IKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRET--QSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSA--------------PWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMV-----ELASK----TTDCCAEKERNHAALERCHALALKESA-------STGEKTAAEEKAAKLQKLKSGFRICKPQGTFLWPNMGASN-----------GSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPY--HHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDT---DGAFSTAATKR 700
+KRQE +D +Q+P L R +L T+ D I ++ EVG VYE+DH LP RTPVQLK IRVVMV+EKTELNVSVR+PSI SL Y S N+ + ++YP LDE FVMGT LA KVL R+I +QEF + FWL I NS + + ++++ T +S+LK NGM+RWG+RRQV+FI + + +PQSS+S V+G+KE E E +E+ + E ++E+ +D E E T+E K+ KR +R AKKVKRE Q NK +N CK++ ++ + +RWSA+RYKLAE+NLLEVMKSKGA+F SPILRP+LR EARKRIGDTGLLDHLLKH+AGK+APGG +RFRRRHNA+G MEYWLESADLV +R+EAGVQDPYWTPPPGW GDCP+QDP+CA EL+ LK+E K++RDME++VS +EL K+RREM E + K EE ++ V + + P+KSD +S+ + + K ++QL IS+ ++ +++++ L S V +L S T+CC EKE+ E A + E+TAAE+KAAK+Q+LKSGFRICKPQGTFLWPNM ++N SS +V +VEDL +V TPPSVSSSTA APPQLP+ HHHH P+SP++P+ ERRAVTVTV + + + ++T ++ +K++++L+NLND P T DG T +T++
Sbjct: 3 LKRQEQG--VDGAQTPPLARHVLPTS-DCTIPSHSNIETQEQIEVGSVYEIDHTKLPPRTPVQLKCIRVVMVSEKTELNVSVRFPSIESLQRYFS-NR--TREMYPELDERFVMGTTLAEKVLFRKIPSQEFAEKKQSNEFWLEICNSV--SGFGDVISRKSGT-CVSELKCNGMIRWGVRRQVRFIGKHRE----NPQSSSSIVRGAKEANEEEEEEEAEVEEEEEEEDDKEAVTEETNEIGKR--KRSSRLVR----NAKKVKREKRRQINKPKTKNSCKQIAVLKNPQDRWSADRYKLAERNLLEVMKSKGAVFGSPILRPELRAEARKRIGDTGLLDHLLKHMAGKVAPGGSDRFRRRHNAEGAMEYWLESADLVDIRREAGVQDPYWTPPPGWKQGDCPTQDPICAMELKQLKKETTKLERDMEEMVSKKQMDDELAKLRREMLELLSIKQNEESQAIVVSNPSATSQNLDLDTSLLVPFKSDLDSSFITLEKYKEQLMVISEYVSRIEEEIKKLKSKVGEEETKLDSSALMVATECCTEKEKKKVGENGKQQEVGTEGADNQSKTNTAAERTAAEQKAAKIQRLKSGFRICKPQGTFLWPNMASNNNKNSNANTSMLSSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPFHRHHHHHPSSPVKPLAERRAVTVTV--SAIGNPNVSTTTTTTTTTTSTITNKTSSTLLNLNDFPTTNPGDGFCGTPSTRQ 718
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PLV5 ((Protein DYAD like {ECO:0000313|EMBL:PSR93315.1}))
HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0
Identity = 353/730 (48.36%), Postives = 470/730 (64.38%), Query Frame = 0
Match: A0A2R6PLV5 ((Protein DYAD like {ECO:0000313|EMBL:PSR93315.1}))
HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0
Identity = 353/730 (48.36%), Postives = 470/730 (64.38%), Query Frame = 0
Query: 14 CSESNNNQMMKRQEAHTFLDSSQSPTLRRQLLQTNE---DQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQS----NKKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFT---KKIQEEIWSLQVQSS-----------APWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVELASK-------TTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKA---------------AKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDGAFSTAAT 698
C ES + + QE D +Q+P L R L T++ ++ E+G VYE+DH LP RTPVQL S RVVMV+EKTE+NVSV +PSI+SL Y S + +++YP LDE FVMGT LA KVL R++ +QEF + + + FWL+ ++P I NK P +S++K NGMVRWG+RRQVKFI + D+ PQSS+S V G ++ E ED ++E +E+ E+ E E T+E ++ KRK Y R KAKK K E + NK +N CK++++ +S RWSAERYKLAEKNLL+VMK+KGA+ +PILRP+LR EARK+IGDTGLLDHLLKH+AGK+APGG ERF+RRHNA+G MEYWLESADLV +R+EAGVQDPYWTPPPGW GDC +QDP+CAKELR LKEE K++RD+E++VS +EE+ K+RREM+E +K Q+E ++ V + P +SD +S++V + K E+QL IS ++ +++++G L S VE ++ +T CAEK++ + + K+ + G + K AK+Q+LKSGFRICKPQGTFLWPN ++ SS +V +VEDL +V TPPSVSSSTA APPQLPYHHH P SP+RP+ ERRAV VTV T N+ S+T + +KS T+ INLND P TDG FS A +
Sbjct: 71 CGES---KYLNMQEQDNVDDGAQTPPLARHALPTSDCTLQSDETQEDIELGSVYEIDHTKLPRRTPVQLGSTRVVMVSEKTEVNVSVIFPSIQSLQRYFS---DTISEMYPELDERFVMGTKLAEKVLYRKVPSQEFAEKKHSDEFWLVISNPNRGFGDVISNK--AGPCLSEIKCNGMVRWGVRRQVKFIGKHIDND---PQSSSSIVIGEEKAKCEERKEDGQEEEPEEEEENEEAVTEETNETNQTG-KRKRYRPRL-VPKAKKAKLEIEKRRKMNKNMAKNNCKQIVLKNSQIRWSAERYKLAEKNLLDVMKAKGAVHGNPILRPELRSEARKQIGDTGLLDHLLKHMAGKVAPGGTERFQRRHNAEGAMEYWLESADLVDIRREAGVQDPYWTPPPGWELGDCLTQDPICAKELRQLKEETKKLERDVEEMVSKKQMEEEIAKLRREMEESLDSLPRKQQKESQAIVVSNPCVTSQELDLDMVPLESDLDSSMVTLEKYEEQLMAISKYMSRIEEEIGKLKSKVEQETRSGSALMESTGWCAEKKKKEVEEKDGLVVQKKDVGTEGGGGGDQRKTNTTEKAEEEKAAEKAAKIQRLKSGFRICKPQGTFLWPN--SNTLSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPYHHH--PASPVRPLAERRAVKVTVSTIGNNNFS------STTTTTTTTDNKSTTTFINLNDFP-TDG-FSGAPS 775
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GWK7 ((Similar to SWITCH1 {ECO:0000313|EMBL:GFZ15172.1}))
HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 336/679 (49.48%), Postives = 438/679 (64.51%), Query Frame = 0
Match: A0A7J0GWK7 ((Similar to SWITCH1 {ECO:0000313|EMBL:GFZ15172.1}))
HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 336/679 (49.48%), Postives = 438/679 (64.51%), Query Frame = 0
Query: 55 EKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLS--LNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQS----NKKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSS-----------APWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVE--------LASKTTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKA-----------AKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDGAFST 695
++ E+G VYE+DH LP RTPVQL S RVVMV+EKTE+NVSVR+PSI+SL Y S + + + LDE FVMGT LA KVL R++ +QEF + + + FWL+ ++P I NK P +S++K NGMVRWG+RRQVKFI + D+ +PQSS+S V G + E ED ++E +E+ E E+ E E+ + KRK Y R T KAKK K E + NK +N C ++++ + RWSAERYKLAEKNLL+VMK+KGA+ +PILRP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERF+RRHNA+G MEYWLESADLV VR+EAGVQDPYWTPPPGW GDC +QDP+CAKELR LKEE K++RD E++VS +EE+ K+RREM+E K Q+E ++ + + AP +SD +S++V + K E+QL IS ++ +++++G L S VE L T C ++++ + + K+ S G + K AK+Q+LKSGFRICKPQGTFLWPN ++ SS +V +VEDL +V TPPSVSSSTA APPQLPYHHH P SP+RP+ ERRAV VTV T + ST + +KS T+ INLND P TDG T
Sbjct: 13 QEDIELGSVYEIDHTKLPRRTPVQLGSTRVVMVSEKTEVNVSVRFPSIQSLQRYFSDTIRERRTQK----LDETFVMGTKLAEKVLYRKVPSQEFAEKKHSDEFWLVISNPTRGFGDVISNK--AGPCLSEIKCNGMVRWGVRRQVKFIGKHIDN---NPQSSSSIVIGEERAKCEERKEDGQEEEPEEEEE--EDNEEAVTEETNQTGKRKRYRPRLVT-KAKKAKFEIEKRRKMNKNMAKNNCNQIVLKNPQIRWSAERYKLAEKNLLDVMKAKGAVHGNPILRPELRSEARKRIGDTGLLDHLLKHMAGKVAPGGTERFQRRHNAEGAMEYWLESADLVDVRREAGVQDPYWTPPPGWELGDCLTQDPICAKELRQLKEETKKLERDAEEMVSKKQMEEEIAKLRREMEESLPWKQQKESQAIVISNPCVTSQELDLDMAPLESDLDSSMVTLEKYEEQLMAISKYMSRIEEEIGKLKSKVEQETRSGSALMESTGWCAEKEKKEVEEKDEGLVVQKKDVGSEGGDGGDQRKTNTTEKAAEEKAAKIQRLKSGFRICKPQGTFLWPN--SNTLSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPYHHH--PASPVRPLAERRAVKVTVSTV--------GNNNLSTTTTTTTDNKSTTTFINLNDFP-TDGFSGT 666
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EDF6 ((Similar to SWITCH1 {ECO:0000313|EMBL:GFY84382.1}))
HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0
Identity = 340/694 (48.99%), Postives = 454/694 (65.42%), Query Frame = 0
Match: A0A7J0EDF6 ((Similar to SWITCH1 {ECO:0000313|EMBL:GFY84382.1}))
HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0
Identity = 340/694 (48.99%), Postives = 454/694 (65.42%), Query Frame = 0
Query: 26 QEAHTFLDSSQSPTLRRQLLQTNE---DQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQSNKK----SRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSAPWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVE--------LASKTTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKA-----------AKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYS-STAIVASPKSKSNTSLINLNDIPDTD 690
QE D +Q+P L RQ L T++ ++ E+G VYE+DH LP RTPVQL+S RVV+V+EKTE+NVSVR+PSI+SL +Y S + ++YP LDE FVMGT LA KVL R++ +QEF + + + FWL+ ++ I NK T L ++K +GMVRWG+RRQVKFI + D+ +PQ S+SFV+ ++EK + E E++ E +D++ E EE T K+ KRK Y R KAKK K E + ++ +N CK++++ + RWSAERYKLAEKNLLEVMK+KGA+ +PILRP+LR EARK IGDTGLLDHLLKH+AGK APGG ERFRRRHNA+G MEYWLESADLV +R EAGVQDPYWTPPPGW GDC +QDP+CAKELR LKE+ K++RD+E++VS +EE+ K+RREM+E F++ Q+E ++ P +SD +S+LV++ K E+QL I+ + +++++G L S VE L T C ++++ + A+ KE + G+ + K AK+Q+LKSGFRICKPQGTFLWPN SS +V +VEDL +V TPPSVSSSTA AP QLPYHHH P SP++P+ ERRAV VTV T + N +S +T + +S T+LINLND P TD
Sbjct: 2 QEQGNVDDGAQTPPLARQALPTSDCTLQSDETQEDIELGSVYEIDHTKLPLRTPVQLRSTRVVIVSEKTEVNVSVRFPSIQSLQSYFS---DTIREMYPELDERFVMGTKLAEKVLYRKVPSQEFVEKKHSDEFWLVISNSNRGFGDVISNKAGTCLL--EIKCDGMVRWGVRRQVKFIGKHVDN---NPQPSSSFVR-AEEKAKCEEHEEDGQEEEDDNEEAVTEETNET----KQTGKRKRYSPRL-VPKAKKAKLEIEKRRQINKNKTKNNCKQIVLKNPQIRWSAERYKLAEKNLLEVMKAKGAVHGNPILRPELRSEARKLIGDTGLLDHLLKHMAGKAAPGGTERFRRRHNAEGAMEYWLESADLVNIRSEAGVQDPYWTPPPGWELGDCLTQDPICAKELRQLKEKTKKLERDVEEMVSKKQMEEEIAKLRREMEEVFSRNQQKESQAIVDLDMVPLESDLDSSLVKLEKYEEQLMAITKYVNRIEEEIGKLKSKVEQETRSGSALMESTGWCAEKEKKEVEEKDGGLAVQKKEGGTEGDGGGDQRKTNTTEKAAEEKAAKIQRLKSGFRICKPQGTFLWPNRNTL--SSQVVVQVEDLLVVPTPPSVSSSTASAPSQLPYHHH--PASPVKPLAERRAVKVTVST-------VGNTNFSTTTTTTTTTTDESTTTLINLNDFPTTD 670
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LTY5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7148515.1}))
HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 322/664 (48.49%), Postives = 421/664 (63.40%), Query Frame = 0
Match: A0A834LTY5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7148515.1}))
HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 322/664 (48.49%), Postives = 421/664 (63.40%), Query Frame = 0
Query: 58 FEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFW-LIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQSN-KKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSAPWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMV--ELASK-----TTDCCAEKERNHAALERCHA------------------LALKESASTGEKTAAEEKAA-KLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG 691
E+G VYE+DH LP RTPVQL+S RVV+V+EKTELN+SVR+PS +SL YLS T++ P LDE FVMGT LA KVL RQ+ ++EF + + FW LI NS I NK + +S+LK NGM RWG+R QVKF+ R +++ + + ++E+ E+DE K++ KRK C K KK K E QS K+R+ CK+ I RWSAERYK+AEKNLLEVMK+KGA++KSPILRP+LRLEARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G EYWLESADLV +R+EAGVQDPYWTPPPGW GDCPSQDP+CAKE++ LKEE +K++RD+E++VS +EE+ K+RRE++E+ +KK Q+E Q + P + ++ + K +++ +S ++ +++++G L S V E+ S + + C EKE+ A +A KE+ STG A EEKAA K+Q+ KSGFRICKPQGTFLWPNM SS +V EDL MV TPPSVSSS A APPQLPYHHH+ P P++P+ ERRA+ VTV + I + +S+T + +K+ TSL+NLND P G
Sbjct: 45 IELGSVYEIDHSKLPPRTPVQLRSTRVVVVSEKTELNISVRFPSTQSLQRYLS---EGITEMCPELDERFVMGTKLAEKVLFRQVRSREFTEKKNSKDFWQLISNSDCGIGDFVISNKAGSC--LSELKCNGMPRWGVRHQVKFVYRHTETNEDELEENEE----AEEENNGETDESRKND------------------------KRK-RCSSRLVPKGKKAKLENQSQINKTRKKNCKQ------IGRWSAERYKVAEKNLLEVMKAKGAVYKSPILRPELRLEARKRIGDTGLLDHLLKHMAGKVAPGGAERFRRRHNAEGVTEYWLESADLVDIRREAGVQDPYWTPPPGWKTGDCPSQDPICAKEMKELKEETSKLERDLEELVSKKQMEEEIAKLRREIEEELSKKQQQE-----SQETVPL-----NPMITLEKYMEEVMGVSGYVSRIEEEIGKLKSKVREEIKSDSALMVSAESCDEKEKKKVGKPLVVAQQKEAVGTEGRGDQGKTNIAEKEAESTG---AGEEKAAKKIQRPKSGFRICKPQGTFLWPNM----ASSQVVVHAEDLLMVPTPPSVSSSNASAPPQLPYHHHYRPY-PVKPLAERRALKVTVSS-------IGDTNFSTTMTTTAGTNKTTTSLMNLNDFPSHPG 643
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7FLA0 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g093370.2.1}))
HSP 1 Score: 527.709 bits (1358), Expect = 3.530e-175
Identity = 330/724 (45.58%), Postives = 445/724 (61.46%), Query Frame = 0
Match: A0A3Q7FLA0 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g093370.2.1}))
HSP 1 Score: 527.709 bits (1358), Expect = 3.530e-175
Identity = 330/724 (45.58%), Postives = 445/724 (61.46%), Query Frame = 0
Query: 23 MKRQEAHTFLDSSQS-PTLRRQLLQTNEDQGIGEK-HFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGS---KEKLEHESDEDNKDENDDEDNEDGEEE---------------REYTDEDDKKAVKRKPYCLRENTRKAKKVKR---ETQSNKKSRRNKCKKMIV-GSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSNFKE---ELKKVRREMDEQFTKKIQEEIWSLQVQSSA-PWKSDFESALVQVN-----KQEKQLTDISDTITGMKDQMGTL----SSMVELASKTTDCCAEKERNHA---ALERCHALALKESASTGEKT-----AAEEKAAKLQKLKSGFRICKPQGTFLWPNM----GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPY---HHHHPPTSPIRPVPERRAVTVTVKT--ARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG 691
+ R E FL +S++ TL+R ++ + +G K + E+G +YE+DH+ LP RTPVQLKSIRV MV+E T LNV+VR+PS+ SL Y S S+ ++YP DE FVMGT LA KVL RQ+ + EF + + FWL+ ++ G+ K T SQLK NGMV WGIRRQVKF+ R +S+ + +SS+SFV+G K ++ +S+ED+++E+++E++E G E E E + +KRK Y LR T K K R + Q NK +++NKC+++ V +RWS ERYK AEKNL+EVMK+KGA+ +PILRP+LR EARK IGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW GD P+Q P+CA+E R LK E +KRD ED+ + K+ E+ K++R+++E KK Q+E +++ A P + L+ N K E++ ++ + + TL E+ K + +EK A A ER + + + +A K AAE KAAK+Q+LKSGFR+CKPQG+FLWPNM N S +V +VEDL MV TPPSVSSST +APP LP+ H++ SP++PVPERRAVTVTV T + T + DN ST T+LINLND+P G
Sbjct: 23 LGRHENQPFLPTSENHSTLKRH----DDHESLGAKMNIEIGSIYEIDHIFLPPRTPVQLKSIRVAMVSETTALNVAVRFPSLESLQTYFS---NSTREMYPAFDEKFVMGTALANKVLLRQVPSLEFAEKKHLHSFWLMNSTS-----LGVLPKSGTC--FSQLKVNGMVTWGIRRQVKFLGRHEESNNT--KSSSSFVQGDDVPKVEVPAKSEEDDEEEDEEEEDEVGAESLKQEDDEETEENYEEEEAVTEKTNRNLKRKRYSLRATTEKQAKKSRIEIQRQKNKVAKKNKCRQLTVYKDPKDRWSTERYKSAEKNLMEVMKAKGAIATNPILRPELRAEARKSIGDTGLLDHLLKHMAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWELGDSPTQHPVCAQEFRQLKNEIFVLKRDWEDMAISKKQLEVEVGKLKRKIEELELKKKQQETKAIETSRKAIPSMEKCKKQLMIANSDFMAKMEEKFLNLVSKLEEKDKVITTLMLSAEQFAEVKRKEVEQGSEKHGVQAVDVATERSNDQSKELTAINPRKAKNAPPAAEGKAAKIQRLKSGFRLCKPQGSFLWPNMVRKNSGCNLSPQVVVQVEDLHMVQTPPSVSSSTTIAPPSLLPFSNNFHNNNLASPVKPVPERRAVTVTVSTISSETCYEAGDNMMNYSTG-------NKTTTLINLNDVPHNVG 723
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2BEC5 ((Uncharacterized protein {ECO:0000313|EMBL:TMW92408.1}))
HSP 1 Score: 524.628 bits (1350), Expect = 7.007e-174
Identity = 335/728 (46.02%), Postives = 445/728 (61.13%), Query Frame = 0
Match: A0A6N2BEC5 ((Uncharacterized protein {ECO:0000313|EMBL:TMW92408.1}))
HSP 1 Score: 524.628 bits (1350), Expect = 7.007e-174
Identity = 335/728 (46.02%), Postives = 445/728 (61.13%), Query Frame = 0
Query: 23 MKRQEAHTFLDSSQS-PTLRRQLLQTNEDQGIGEK-HFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGS---KEKLEHES----------------DEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRK-AKKVKRETQ--SNKKSRRNKCKKMIV-GSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSNFKE---ELKKVRREMDEQFTKKIQEEIWSLQVQSSA-PWKSDFESALVQVNK------QEKQLTDIS------DTITGMKDQMGTLSSMVELASKTTDCCAEKERNHA---ALERCHALALKESASTGEKT----AAEEKAAKLQKLKSGFRICKPQGTFLWPNM----GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPY---HHHHPPTSPIRPVPERRAVTVTVKT--ARTNDQQIDN-HGYSSTAIVASPKSKSNTSLINLNDIPDTDG 691
+ R E L +S++ TL+R ++ + +G K + E+G +YE+DH+ LP RTPVQLKSIRV MV+E T LNV+VR+PS+ SL Y S S+ ++YP DE FVMGT LA KVL RQ+ + EF + + FWL+ ++ G+ K T SQLK NGMV WGIRRQVKF+ R +S+ + +SS+SFV+G K ++ +S ++ + DDE+ E+ EE E E + +KRK Y LR T K AKK + E Q NK +++NKC+++ V +RWS ERYK AEKNL+EVMK+KGA+ +PILRP+LR EARK IGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DP+W PPPGW GD P+Q P+CA+E R LK E +KRD ED+ + K+ E+ K++R+++E KK Q+E +++ A P + L+ N +EK L +S IT + M + E+ K + +EK A A+ER + + + +A K AAE KAAK+Q+LKSGFR+CKPQG+FLWPNM N S +V +VEDL MV TPPSVSSSTA+APP LPY H++ SP++PVPERRAVTVTV T + T + DN YSS T+LINLND+P G
Sbjct: 22 LGRHENQPLLPTSENHSTLKRH----DDHESLGAKMNIEIGSIYEIDHIFLPPRTPVQLKSIRVAMVSETTALNVAVRFPSLESLHTYFS---NSTREMYPAFDEKFVMGTALANKVLLRQVPSLEFAEKKHLHSFWLMNSTS-----LGVLPKSGTC--FSQLKVNGMVTWGIRRQVKFLGRHEESNNT--KSSSSFVQGDDIPKVEVPAKSEEEDEEEEDEEEEDEVGAESLKQEDDEETEENYEEEEAVTEKTNRNLKRKRYSLRATTEKQAKKTRIEIQRQKNKVAKKNKCRQLTVYKDPKDRWSTERYKSAEKNLMEVMKAKGAIATNPILRPELRAEARKSIGDTGLLDHLLKHMAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPFWIPPPGWELGDSPTQHPVCAQEFRHLKNEIFVLKRDWEDMAISKKQLEVEVGKLKRKIEELELKKKQQETKAIETSRKAIPSMEKCKKQLMIANSDFMAKMEEKFLNLVSKLEEKDKVITAL---MLSAEQFSEVKRKEVEQGSEKHGVQAVDVAMERSNDQSKELTAINPRKAKNAPAAEGKAAKIQRLKSGFRLCKPQGSFLWPNMVRKSSGCNLSPQVVVQVEDLHMVQTPPSVSSSTAIAPPPLLPYSNNFHNNNLASPVKPVPERRAVTVTVSTISSETCYEAGDNMMNYSS--------GNKTTTLINLNDVPHNVG 722
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VUD6 ((protein DYAD-like isoform X1 {ECO:0000313|RefSeq:XP_009768556.1}))
HSP 1 Score: 524.242 bits (1349), Expect = 1.359e-173
Identity = 338/768 (44.01%), Postives = 463/768 (60.29%), Query Frame = 0
Match: A0A1U7VUD6 ((protein DYAD-like isoform X1 {ECO:0000313|RefSeq:XP_009768556.1}))
HSP 1 Score: 524.242 bits (1349), Expect = 1.359e-173
Identity = 338/768 (44.01%), Postives = 463/768 (60.29%), Query Frame = 0
Query: 1 METYHRRRLRSAPCSESNNNQMMKRQEAHTFLDSSQS----------PTLRRQLLQTNEDQGI---GEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNS---PEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSK-EKL---EHESDEDNKDENDDEDNEDGEEEREY------------TDEDDKKAVKRKPYCLRENTRKAKKVKRET--QSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSN---FKEELKKVRREMDE-QFTKKIQEEIWSLQVQSSAPWK-----SDF-----ESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVELASKTTDCCAEKERNHAALERCHALALKE----SASTGEKT--AAEEKAAKLQKLKSGFRICKPQGTFLWPNM------GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPYHHHHP---PTSPIRPVPERRAVTVTVKTARTNDQ-QIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG-AFSTAATKRH 701
METY+R+R + A + + + +++ + + PT R L+ N D I + + E+G +YE+DH+ LP RTPVQLKSIRV MV+E+T LNV+VRYPS++SL Y S +K ++YP DE FVMGT LA KVL RQ+ +QEF + + FWL+ + PAA GI +SQLK NGMV WGIRRQVKF+ R D S ++ +SS+SFV+G + KL E +ED +D++++ED DGE ++ E K +KRK Y R T K K + NK ++NKC+ + + +RWSAERY+LAEKNL+EVMK+KGA +PI+RP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW GD P Q P+C +E + LK+E +KRD E++ S+ +EE+ +++R ++E +F KK + I + + + SDF E L V+K E++ IS + +++ + + + EK+R+ A ++ + E +A+ +KT AEEKAAK+Q+LKSGFRICKPQG+FLWPNM N S+ ++ VED+ MV TPPSVSSSTA+A P LPY+ H+ P SP++PVPERRAVTVTV T + + + ++ YS+ S T+LINLND+P + G F A T R
Sbjct: 4 METYYRKRSKKAIQANLEMDYLKGQKQGSVACADTPALARHDNQPLLPTSDRCTLKRNADHEILQNAKMNIEMGSIYEIDHMYLPPRTPVQLKSIRVAMVSERTVLNVAVRYPSMQSLQTYFSNSK---REMYPAFDEKFVMGTALASKVLLRQVPSQEFAEKKHLHSFWLVNYTTLGAVPAAKNGI--------CLSQLKVNGMVTWGIRRQVKFMGRHEDQS-NNTKSSSSFVQGEEIPKLKTPEKSEEEDEEDDDEEEDEIDGESVKQEDEEAEEDDDEEAVTEKTNKNLKRKRYSFRATTVKKKAKTTRGPEKKNKIKKKNKCRVLSVYKDPKDRWSAERYELAEKNLMEVMKAKGATANNPIIRPELRAEARKRIGDTGLLDHLLKHLAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWKLGDSPIQHPICTQEFKHLKDEIFVLKRDWEEMASSKEQLEEEVGRLKRRIEELEFKKKQSQAIETAKTMEKYKKQLMMTTSDFMAKMEEKCLSLVSKLEEKEKSISTLMLSTEEKKKQVEPEKQGVQEVV-TVGEKKRSKVADDQSKEVIAVEPKLKAATKAQKTTPTAEEKAAKIQRLKSGFRICKPQGSFLWPNMVRNNKNNGGNMSNQVMVLVEDVHMVPTPPSVSSSTAIAAPSLLPYYQHNKQQQPVSPVKPVPERRAVTVTVSTISSETRYEAGDNNYST--------SNKTTTLINLNDVPFSAGEGFQQAPTSRQ 750
BLAST of XM_017383695.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VKP1 ((protein DYAD-like isoform X2 {ECO:0000313|RefSeq:XP_009768557.1}))
HSP 1 Score: 523.857 bits (1348), Expect = 2.336e-173
Identity = 340/776 (43.81%), Postives = 465/776 (59.92%), Query Frame = 0
Match: A0A1U7VKP1 ((protein DYAD-like isoform X2 {ECO:0000313|RefSeq:XP_009768557.1}))
HSP 1 Score: 523.857 bits (1348), Expect = 2.336e-173
Identity = 340/776 (43.81%), Postives = 465/776 (59.92%), Query Frame = 0
Query: 1 METYHRRRLR------------------SAPCSESNNNQMMKRQEAHTFLDSSQSPTLRR---QLLQTNEDQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNS---PEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSK-EKL---EHESDEDNKDENDDEDNEDGEEEREY------------TDEDDKKAVKRKPYCLRENTRKAKKVKRET--QSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSN---FKEELKKVRREMDE-QFTKKIQEEIWSLQVQSSAPWK-----SDF-----ESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVELASKTTDCCAEKERNHAALERCHALALKE----SASTGEKT--AAEEKAAKLQKLKSGFRICKPQGTFLWPNM------GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPYHHHHP---PTSPIRPVPERRAVTVTVKTARTNDQ-QIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG-AFSTAATKRH 701
METY+R+R + S C+++ + R + L +S TL+R ++LQ + + E+G +YE+DH+ LP RTPVQLKSIRV MV+E+T LNV+VRYPS++SL Y S +K ++YP DE FVMGT LA KVL RQ+ +QEF + + FWL+ + PAA GI +SQLK NGMV WGIRRQVKF+ R D S ++ +SS+SFV+G + KL E +ED +D++++ED DGE ++ E K +KRK Y R T K K + NK ++NKC+ + + +RWSAERY+LAEKNL+EVMK+KGA +PI+RP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW GD P Q P+C +E + LK+E +KRD E++ S+ +EE+ +++R ++E +F KK + I + + + SDF E L V+K E++ IS + +++ + + + EK+R+ A ++ + E +A+ +KT AEEKAAK+Q+LKSGFRICKPQG+FLWPNM N S+ ++ VED+ MV TPPSVSSSTA+A P LPY+ H+ P SP++PVPERRAVTVTV T + + + ++ YS+ S T+LINLND+P + G F A T R
Sbjct: 4 METYYRKRSKKAIQANLEMDYLKGQKQGSVACADT---PALARHDNQPLLPTSDRCTLKRNDHEILQN------AKMNIEMGSIYEIDHMYLPPRTPVQLKSIRVAMVSERTVLNVAVRYPSMQSLQTYFSNSK---REMYPAFDEKFVMGTALASKVLLRQVPSQEFAEKKHLHSFWLVNYTTLGAVPAAKNGI--------CLSQLKVNGMVTWGIRRQVKFMGRHEDQS-NNTKSSSSFVQGEEIPKLKTPEKSEEEDEEDDDEEEDEIDGESVKQEDEEAEEDDDEEAVTEKTNKNLKRKRYSFRATTVKKKAKTTRGPEKKNKIKKKNKCRVLSVYKDPKDRWSAERYELAEKNLMEVMKAKGATANNPIIRPELRAEARKRIGDTGLLDHLLKHLAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWKLGDSPIQHPICTQEFKHLKDEIFVLKRDWEEMASSKEQLEEEVGRLKRRIEELEFKKKQSQAIETAKTMEKYKKQLMMTTSDFMAKMEEKCLSLVSKLEEKEKSISTLMLSTEEKKKQVEPEKQGVQEVV-TVGEKKRSKVADDQSKEVIAVEPKLKAATKAQKTTPTAEEKAAKIQRLKSGFRICKPQGSFLWPNMVRNNKNNGGNMSNQVMVLVEDVHMVPTPPSVSSSTAIAAPSLLPYYQHNKQQQPVSPVKPVPERRAVTVTVSTISSETRYEAGDNNYST--------SNKTTTLINLNDVPFSAGEGFQQAPTSRQ 749
| Match Name | Stats | Description |
|---|---|---|
| A0A4S4EMR0 | E-Value: 0.000e+0, PID: 49.39 | (Uncharacterized protein {ECO:0000313|EMBL:THG1794... [more] |
| A0A7J7I456 | E-Value: 0.000e+0, PID: 49.25 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5959... [more] |
| A0A2R6PLV5 | E-Value: 0.000e+0, PID: 48.36 | (Protein DYAD like {ECO:0000313|EMBL:PSR93315.1})[more] |
| A0A7J0GWK7 | E-Value: 0.000e+0, PID: 49.48 | (Similar to SWITCH1 {ECO:0000313|EMBL:GFZ15172.1})[more] |
| A0A7J0EDF6 | E-Value: 0.000e+0, PID: 48.99 | (Similar to SWITCH1 {ECO:0000313|EMBL:GFY84382.1})[more] |
| A0A834LTY5 | E-Value: 0.000e+0, PID: 48.49 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7148... [more] |
| A0A3Q7FLA0 | E-Value: 3.530e-175, PID: 45.58 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A6N2BEC5 | E-Value: 7.007e-174, PID: 46.02 | (Uncharacterized protein {ECO:0000313|EMBL:TMW9240... [more] |
| A0A1U7VUD6 | E-Value: 1.359e-173, PID: 44.01 | (protein DYAD-like isoform X1 {ECO:0000313|RefSeq:... [more] |
| A0A1U7VKP1 | E-Value: 2.336e-173, PID: 43.81 | (protein DYAD-like isoform X2 {ECO:0000313|RefSeq:... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |