Resource Type:
Polypeptide
Name:
XM_017386490.1
Identifier:
XM_017386490.1-protein
Sequence:
MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANAD
EIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSK
HTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQ
GKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTEDPLKRVSSW
SFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLK
NLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWK
AQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQE
IVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKL
ETNESTKVIIGGDIIGLKSESKSTDNKSDADKTGSKQDGENKAQAKVEVP
DNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFN
GGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGE
DEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMT
HWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKI
LRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQER
EKDLEKKQKSAEGKDTENKEENKEESERVITLRSLNMEDLRQAKNQVAAS
FASEGSVMSELKQWNALYGEGGSRKKEQLSYFL
Sequence Length:
783
Sequence Checksum:
7c2bbfecc609a9e981958bd445fc79ea
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017386490.1, derives from mRNA, XM_017386490.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z8N8 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1166.37 bits (3016), Expect = 0.000e+0
Identity = 593/841 (70.51%), Postives = 679/841 (80.74%), Query Frame = 0
Match: A0A5B6Z8N8 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1166.37 bits (3016), Expect = 0.000e+0
Identity = 593/841 (70.51%), Postives = 679/841 (80.74%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTE---------------------DPLK---------------------------RVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETN-ESTKVIIGGDIIGLKSESKS----TDNKSDADKT--GSKQDGENKAQAKVEVP-DNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKHI LSAL VGVGVG LGL SGQ +SKW+ + + G A++IE EL R +VDGKES VTFD+F YY+SER R+LL SAAYVHL H DVSK+TRNLS AS AILLS +ELY QMLAKAL+H+F+AKLLLLDVTDFS+KMQ KYGS K+E+ K S+S+ LGR+SSLLGSFSI + G DT DP K R+SSW FDEK +QSLYKVL+SVSE +SIILY+RDVE+LLLQS RLY LFDKMLK L G VL+LGS+ML+ DD ++D+++ LF Y I I+PPEDE+ L+SWKAQ++EDMK IQ QDNKNHIAEVLAANDLEC DL S+C D+ V +++I+EIVVSA+++HLMNNK+PEYRNGKL+ISSKSLSHGLS FQE K+ GKD +KLETN ES+K G DIIG + +SKS ++NKS+ +K+ +K+DGEN + EVP DNEFEKRIRPEVIPANEIGVTFADIG+L+E KESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFM+HWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAE+RE ILRTLLAKEKVE LDFKEL TMTEGYSGSDLK LC TAAYRPVREL+QQER KD+++KQ++ EG+ +E+ + KEE E+VITLRSLNMED+RQAKNQVAASFA+EGS+MSELKQWN LYGEGGSRKKEQL+YFL
Sbjct: 1 MEQKHILLSALSVGVGVG--LGLASGQTVSKWTGYNYSAD-----GITAEQIEQELLRFVVDGKESKVTFDEFPYYLSERTRVLLTSAAYVHLKHLDVSKYTRNLSPASRAILLSGPAELYQQMLAKALAHHFEAKLLLLDVTDFSLKMQSKYGSAKKESSFKRSISEVTLGRMSSLLGSFSIFSPGEDTRGTLSRQSSGLDIKSRGMEGSNDPPKLRRNSSTSTDMSSVSSQCSSPNPVSHRRMSSWIFDEKLLLQSLYKVLLSVSENSSIILYLRDVERLLLQSQRLYKLFDKMLKKLSGSVLVLGSRMLDPDDDCGEVDDRLALLFPYHIEIRPPEDETHLISWKAQLQEDMKKIQFQDNKNHIAEVLAANDLECDDLGSVCHTDTIVFSNYIEEIVVSAISYHLMNNKDPEYRNGKLVISSKSLSHGLSIFQEGKSGGKDTIKLETNAESSKDSEGEDIIGSRPDSKSETLTSENKSETEKSVPSAKKDGENPSPKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILRTLLAKEKVEDLDFKELGTMTEGYSGSDLKNLCTTAAYRPVRELMQQERLKDMKRKQRAEEGQTSEDASDTKEEGKEEKVITLRSLNMEDMRQAKNQVAASFAAEGSIMSELKQWNDLYGEGGSRKKEQLTYFL 834
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z5I0 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1159.44 bits (2998), Expect = 0.000e+0
Identity = 596/841 (70.87%), Postives = 677/841 (80.50%), Query Frame = 0
Match: A0A5B6Z5I0 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1159.44 bits (2998), Expect = 0.000e+0
Identity = 596/841 (70.87%), Postives = 677/841 (80.50%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTE---------------------DPLK---------------------------RVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETN-ESTKVIIGGDIIGLKSESKS----TDNKSDADKT--GSKQDGENKAQAKVEVP-DNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKHI LSAL VGVGVG LGL SGQ +SKW+ + + G A++IE EL R +VDGKES VTFD+F YY+SER R+LL SAAYVHL H D+ K+TRNLS AS AILLS +ELY QMLAKAL+H+F+AKLLLLDVTDFS+K+Q KYGS K+E K S+S+ LGR+SSLLG FSIL+ DT DP K R+S WSFDEK F+QSLYKVLVSVSET+ IILY+RDVE+LLLQS RLY LFD+MLK L G VL+LGS+ML+ DD ++DEK+ LF Y I I+PPEDE+ L+SWKAQ+EEDMK IQ QDNKNHIAEVLAANDLEC L SIC +D+ VL+++I+EIVVSA+++HLMNNK+PEYRNGKL+ISSKSLSHGLS FQE K+ GKD +KLETN ES+K G DIIG + +SKS ++NKS+ +K+ +K+DGEN + EVP DNEFEKRIRPEVIPANEIGVTFADIG+L+E KESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESRE ILRTLLAKEKVE LDFKELATMTEGYSGSDLK LCVTAAYRPVRELIQQER KD+E+K+++ EG+ +E+ + KEE E VI LR L+MED+RQAKNQVAASFA+EGSVMSELKQWN LYGEGGSRKK+QL+YFL
Sbjct: 1 MEQKHILLSALSVGVGVG--LGLASGQTVSKWTGYNYSAD-----GITAEQIEQELLRFVVDGKESKVTFDEFPYYLSERTRILLTSAAYVHLKHLDIYKYTRNLSPASRAILLSGPAELYQQMLAKALAHHFEAKLLLLDVTDFSLKVQSKYGSAKKEYSFKRSISEVTLGRMSSLLG-FSILSPREDTRGTLCRQSSGLDIKSRDMEGSNDPPKLRRNASTSSDMSSISSQCSSSNPASHRRMSGWSFDEKLFLQSLYKVLVSVSETSPIILYLRDVERLLLQSQRLYKLFDRMLKKLSGSVLVLGSRMLDPDDDCGEVDEKLALLFPYNIEIRPPEDETHLVSWKAQLEEDMKKIQFQDNKNHIAEVLAANDLECDGLGSICHSDTMVLSNYIEEIVVSAISYHLMNNKDPEYRNGKLVISSKSLSHGLSIFQEGKSGGKDTIKLETNAESSKDSEGEDIIGSRPDSKSETLTSENKSETEKSVPSAKKDGENPSPKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREMILRTLLAKEKVEDLDFKELATMTEGYSGSDLKNLCVTAAYRPVRELIQQERLKDMERKRRAEEGQSSEDASDTKEEGKEEGVIALRPLDMEDMRQAKNQVAASFAAEGSVMSELKQWNDLYGEGGSRKKQQLTYFL 833
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z5N2 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0
Identity = 581/835 (69.58%), Postives = 662/835 (79.28%), Query Frame = 0
Match: A0A5B6Z5N2 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0
Identity = 581/835 (69.58%), Postives = 662/835 (79.28%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTE---------------------DPLK---------------------------RVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETNESTKVIIGGDIIGLKSESKSTDNKSDADKTGSKQDGENKAQAKV-EVP-DNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKHI LSAL VGVGVG LGL SGQ +SKW+ + + G A++IE EL R +VDGKES VTFD+F YY+SER R+LL SAAYVHL H DVSK+TRNLS AS AILLS +ELY QMLAKAL+H+F+AKLLLLDVTDFS+KMQ KYGS K+E+ K S+S+ LGR+SSLLGSFSI + G DT DP K R+SSW FDEK +QSLYKVL+SVSE +SIILY+RDVE+LLLQS RLY LFDKMLK L G VL+LGS+ML+ DD ++D+++ LF Y I I+PPEDE+ L+SWKAQ++EDMK IQ QDNKNHIAEVLAANDLEC DL S+C D+ V +++I+EIVVSA+++HLMNNK+PEYRNGKL+ISSKSLSHGLS FQE K+ GKD +KLETN+ ES + +K+DGEN + +K EVP DNEFEKRIRPEVIPANEIGVTFADIG+L+E KESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFM+HWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAE+RE ILRTLLAKEKVE LDFKEL TMTEGYSGSDLK LC TAAYRPVREL+QQER KD+++KQ++ EG+ +E+ + KEE E+VITLRSLNMED+RQAKNQVAASFA+EGS+MSELKQWN LYGEGGSRKKEQL+YFL
Sbjct: 1 MEQKHILLSALSVGVGVG--LGLASGQTVSKWTGYNYSAD-----GITAEQIEQELLRFVVDGKESKVTFDEFPYYLSERTRVLLTSAAYVHLKHLDVSKYTRNLSPASRAILLSGPAELYQQMLAKALAHHFEAKLLLLDVTDFSLKMQSKYGSAKKESSFKRSISEVTLGRMSSLLGSFSIFSPGEDTRGTLSRQSSGLDIKSRGMEGSNDPPKLRRNSSTSTDMSSVSSQCSSPNPVSHRRMSSWIFDEKLLLQSLYKVLLSVSENSSIILYLRDVERLLLQSQRLYKLFDKMLKKLSGSVLVLGSRMLDPDDDCGEVDDRLALLFPYHIEIRPPEDETHLISWKAQLQEDMKKIQFQDNKNHIAEVLAANDLECDDLGSVCHTDTIVFSNYIEEIVVSAISYHLMNNKDPEYRNGKLVISSKSLSHGLSIFQEGKSGGKDTIKLETND---------------ESSKDSEGEEKSAPSAKKDGENPSPSKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILRTLLAKEKVEDLDFKELGTMTEGYSGSDLKNLCTTAAYRPVRELMQQERLKDMKRKQRAEEGQTSEDASDTKEEGKEEKVITLRSLNMEDMRQAKNQVAASFAAEGSIMSELKQWNDLYGEGGSRKKEQLTYFL 813
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z620 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1142.49 bits (2954), Expect = 0.000e+0
Identity = 580/835 (69.46%), Postives = 662/835 (79.28%), Query Frame = 0
Match: A0A5B6Z620 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1142.49 bits (2954), Expect = 0.000e+0
Identity = 580/835 (69.46%), Postives = 662/835 (79.28%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTE---------------------DPLK---------------------------RVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETNESTKVIIGGDIIGLKSESKSTDNKSDADKTGSKQDGENKAQAKV-EVP-DNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKHI LSAL VGVGVG LGL SGQ +SKW+ + + G A++IE EL R +VDGKES VTFD+F YY+SER R+LL SAAYVHL H DVSK+TRNLS AS AILLS +ELY QMLAKAL+H+F+AKLLLLDVTDFS+KMQ KYGS K+E+ K S+S+ LGR+SSLLGSFSI + G DT DP K R+SSW FDEK +QSLYKVL+SVSE +SIILY+RDVE+LLLQS RLY LFDKMLK L G VL+LGS+ML+ DD ++D+++ LF Y I I+PPEDE+ L+SWKAQ++EDMK IQ QDNKNHIAEVLAANDLEC DL S+C D+ V +++I+EIVVSA+++HLMNNK+PEYRNGKL+ISSKSLSHGLS FQE K+ GKD +KLETN+ ES + +K+DGEN + +K EVP DNEFEKRIRPEVIPANEIGVTFADIG+L+E KESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFM+HWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAE+RE ILRTLLAKEKVE LDFKEL TMTEGYSGSDLK LC TAAYRPVREL+QQER KD+++KQ++ EG+ +E+ + KEE E+VITLRSLNMED+RQAKNQVAASFA+EGS+MSELKQWN LYGEGGSRKK+QL+YFL
Sbjct: 1 MEQKHILLSALSVGVGVG--LGLASGQTVSKWTGYNYSAD-----GITAEQIEQELLRFVVDGKESKVTFDEFPYYLSERTRVLLTSAAYVHLKHLDVSKYTRNLSPASRAILLSGPAELYQQMLAKALAHHFEAKLLLLDVTDFSLKMQSKYGSAKKESSFKRSISEVTLGRMSSLLGSFSIFSPGEDTRGTLSRQSSGLDIKSRGMEGSNDPPKLRRNSSTSTDMSSVSSQCSSPNPVSHRRMSSWIFDEKLLLQSLYKVLLSVSENSSIILYLRDVERLLLQSQRLYKLFDKMLKKLSGSVLVLGSRMLDPDDDCGEVDDRLALLFPYHIEIRPPEDETHLISWKAQLQEDMKKIQFQDNKNHIAEVLAANDLECDDLGSVCHTDTIVFSNYIEEIVVSAISYHLMNNKDPEYRNGKLVISSKSLSHGLSIFQEGKSGGKDTIKLETND---------------ESSKDSEGEEKSAPSAKKDGENPSPSKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILRTLLAKEKVEDLDFKELGTMTEGYSGSDLKNLCTTAAYRPVRELMQQERLKDMKRKQRAEEGQTSEDASDTKEEGKEEKVITLRSLNMEDMRQAKNQVAASFAAEGSIMSELKQWNDLYGEGGSRKKQQLTYFL 813
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1BRP5 ((ATP binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400051401}))
HSP 1 Score: 1140.18 bits (2948), Expect = 0.000e+0
Identity = 580/841 (68.97%), Postives = 670/841 (79.67%), Query Frame = 0
Match: M1BRP5 ((ATP binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400051401}))
HSP 1 Score: 1140.18 bits (2948), Expect = 0.000e+0
Identity = 580/841 (68.97%), Postives = 670/841 (79.67%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAA-------------GRDTED-----------------------------------PLKRVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETNESTKVIIGGDIIGLKSESKS----TDNKSDADKTG--SKQDGENKAQAKVE--VPDNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKH+ LSAL VGVGVG LGL SGQ ++KW++ AA+ G D+IE ELRRL++DGK + +TF+DF YY+SER R+LL SAAYVHLNH DVSKHTRNLS AS AILLS +ELY Q LAKAL+H+F AKLLLLD+TDFS+KMQ KYG K+E+ K S+S++ LGR+SSLLGSFSIL A G D++ P+KRV+SWS DEK F+QSL+KVLVS+SET+ +ILYIRDV++ L QSPR Y LFD+MLK + G VL+LGS+M E +D ++DEK++ LF Y I I PPEDE+ L WK Q+ EDMK IQ QDNKNHIAEVLAANDLEC DL SIC AD+ VL+++I+EIV+SA++ HLMN+K+PEYRNGKLLISS SLSHGL FQ+ K+ +D+LK+E N D IGLK ESKS +++K +A+K+G +K+DGE + +K +PDNEFEKRIRPEVIP++EIGVTFADIG+L+ETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTI+FVDEVDSMLGQRTR GEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLP+AE+REKILRTLLAKEKVE LDFKEL MTEGYSGSDLK LC TAAYRPVRELIQQER+KDLEKK+ + EG+ E + KEE+ ERVITLR LNMED+RQAKNQVAASFASEGSVMSELKQWN LYGEGGSRKK+QLSYFL
Sbjct: 1 MEQKHVLLSALSVGVGVG--LGLASGQAVNKWTN--AAQ------GITPDQIEKELRRLIIDGKLTKITFEDFPYYLSERTRVLLTSAAYVHLNHLDVSKHTRNLSPASRAILLSGPAELYQQTLAKALAHHFDAKLLLLDLTDFSLKMQSKYGIFKKESVFKRSISESTLGRLSSLLGSFSILPARETNGVTYSRQTVGFDSKSRNREGASNSLKHRRTASVSSDISSISSESSASNPAPIKRVNSWSLDEKAFLQSLFKVLVSISETSRVILYIRDVDRHL-QSPRAYKLFDRMLKKISGSVLVLGSRMFEHEDDCEEVDEKLSLLFPYNIEISPPEDETHLTDWKTQLAEDMKMIQFQDNKNHIAEVLAANDLECDDLGSICHADTMVLSNYIEEIVISAISHHLMNSKDPEYRNGKLLISSNSLSHGLGVFQDGKSGCRDSLKMEANAELSKDAAVDDIGLKPESKSENPTSESKGEAEKSGPSTKKDGEISSASKAPEVIPDNEFEKRIRPEVIPSHEIGVTFADIGALDETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIVFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAAENREKILRTLLAKEKVEDLDFKELGVMTEGYSGSDLKNLCTTAAYRPVRELIQQERKKDLEKKRSAEEGQSAEGNSDEKEEAAEERVITLRPLNMEDMRQAKNQVAASFASEGSVMSELKQWNDLYGEGGSRKKQQLSYFL 830
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5TIA3 ((putative cell division cycle ATPase {ECO:0000313|RefSeq:XP_021827138.1}))
HSP 1 Score: 1139.02 bits (2945), Expect = 0.000e+0
Identity = 586/836 (70.10%), Postives = 678/836 (81.10%), Query Frame = 0
Match: A0A6P5TIA3 ((putative cell division cycle ATPase {ECO:0000313|RefSeq:XP_021827138.1}))
HSP 1 Score: 1139.02 bits (2945), Expect = 0.000e+0
Identity = 586/836 (70.10%), Postives = 678/836 (81.10%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTED-----------------------------------------------PLKRVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETN-ESTKVIIGGDIIGLKSESKSTDNKSDADKTGS--KQDGENKAQAKVEV-PDNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEE--SERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKHI+LSAL VGVGVGVGLGL SGQ +SKW + + + A++IE EL R ++DG++S VTF++F YY+ ER RMLL SAAYVHL HSD+SKHTRNLS AS AILLS +ELYHQMLAKAL+HYF++KLLLLD+TDFS+K+Q KYG KRE LK S+S+ + R+SSLLGSFSIL + D++ PLKRV+SW FDEK F+QSLYKVL S+SET SIILYIRDVEKL LQS RLYNLF+KMLK L G VL+LGS+ML+++D +++DE++ LF Y I I PPEDE+ L+SWKAQ+EEDMK IQ DNKNHIAEVLA+NDLEC DL SIC AD+ L+++I+EIVVSA+++HLM NK+PEYRNGKL+ISS SLSHGLS FQE K+ GKD+LKLETN +S K G + +G K+E+ + +NK +A+K+G K+D EN KVEV PDNEFEKRIRPEVIPANEIGVTFADIG+L++ KESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFMTHWDGLLTK GERILVLAATNRPFDLDEAIIRRFERR+MVGLPS E+RE IL+TLL+KEKVE+LDFKELATMTEGYSGSDLK LCVTAAYRPVRELIQQER+KD+EKK++ A+GK TE+ E KEE +R ITLR+LNMED+RQAKNQVAASFASEGSVMSEL+ WN LYGEGGSRKK+QL+YFL
Sbjct: 1 MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSVDE-----VTAEQIEQELMRQVLDGRDSKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGPAELYHQMLAKALAHYFESKLLLLDITDFSIKIQSKYGCAKREPYLKRSISEVTMERMSSLLGSFSILPSSGDSKGTLCRQSSTTDLKSRGAEGPNNSTLQRNASSASDMSSFSSKCAPTSSAPLKRVTSWCFDEKLFLQSLYKVLASISETGSIILYIRDVEKLFLQSRRLYNLFNKMLKRLSGSVLVLGSRMLDAEDDCKEVDERLAGLFPYNIEISPPEDETHLVSWKAQLEEDMKMIQFHDNKNHIAEVLASNDLECDDLGSICHADTMFLSNYIEEIVVSAISYHLMQNKDPEYRNGKLVISSTSLSHGLSIFQEGKSGGKDSLKLETNADSNKETEGEEAVGAKTETAAPENKGEAEKSGPAVKKDSENPPPPKVEVAPDNEFEKRIRPEVIPANEIGVTFADIGALDDIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKTGERILVLAATNRPFDLDEAIIRRFERRVMVGLPSVENREMILKTLLSKEKVENLDFKELATMTEGYSGSDLKNLCVTAAYRPVRELIQQERQKDMEKKKREAQGKSTEDASETKEEEKEDREITLRALNMEDMRQAKNQVAASFASEGSVMSELQHWNDLYGEGGSRKKQQLTYFL 831
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G2X6V7 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1133.24 bits (2930), Expect = 0.000e+0
Identity = 573/825 (69.45%), Postives = 663/825 (80.36%), Query Frame = 0
Match: A0A2G2X6V7 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1133.24 bits (2930), Expect = 0.000e+0
Identity = 573/825 (69.45%), Postives = 663/825 (80.36%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTED------------------------------------PLKRVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETNESTKVIIGGDIIGLKSESKSTD--NKSDADKTGSKQDGENKAQAKVE--VPDNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKH+ LSAL VGVGVG LGL SGQ ++KW+S G D+IE ELRRL+VDGK + +TF+DF YY+SER R+LL SAAYVHLNH DVSKHTRNLS AS AILLS +ELY Q LAKAL+H+F AKLLLLD+TDFS+KMQ KYG K+E+ K S S++ LGR+SSLLGS+S A DT+ LKR++SWS DEK F+Q+L+KVLVS+SET+ +ILYIRDV++ L QS R Y LFD+MLK L G VL+LGS+M E +D ++DEK++ LF Y I+I+PPEDE+ L WK Q+EEDMK IQ QDNKNHIAEVLAANDLEC DL SIC AD+ VL+++I+EIV+SA+++HLM++K+PEYRNGKLLISS SLSHGLS FQ+ K+ +D+LK+E N +K DI GLK E+KS + ++S + +K+DG+ + +K +PDNEFEKRIRPEVIP+NEIGVTFADIG+L+ETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMV LP+ E+REKILRTLLAKEKVE LD+KELA MTEGYSGSDLK LC TAAYRPVRELIQQEREKDLEKK+++ EGK+ E + K E+ ERVI+LR LNMED+RQAKNQVAASFASEGSVMSELKQWN LYGEGGSRKKEQLSYFL
Sbjct: 1 MEQKHVLLSALSVGVGVG--LGLASGQAVNKWTSAAE--------GITPDQIEQELRRLVVDGKHTKITFEDFPYYLSERTRVLLTSAAYVHLNHLDVSKHTRNLSPASRAILLSGPAELYQQTLAKALAHHFDAKLLLLDITDFSLKMQSKYGIFKKESGFKRSTSESTLGRLSSLLGSYSRQPAMFDTKSRNREGASNCIKHRRTASVSSDISSISSDSSSSSPVASLKRINSWSLDEKVFLQTLFKVLVSMSETSRVILYIRDVDRHL-QSARAYKLFDRMLKKLSGSVLVLGSRMFEHEDDCEEVDEKLSLLFPYNIDIRPPEDETHLTDWKTQLEEDMKMIQFQDNKNHIAEVLAANDLECDDLGSICHADTMVLSNYIEEIVISAISYHLMHSKDPEYRNGKLLISSNSLSHGLSVFQDGKSGCRDSLKMEANAESKDTPVDDI-GLKPETKSDNPTSESKGESGPTKKDGDISSASKAPEVIPDNEFEKRIRPEVIPSNEIGVTFADIGALDETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVSLPAVENREKILRTLLAKEKVEDLDYKELAAMTEGYSGSDLKNLCTTAAYRPVRELIQQEREKDLEKKRRAEEGKNAEGHSDEKNEAAEERVISLRPLNMEDMRQAKNQVAASFASEGSVMSELKQWNDLYGEGGSRKKEQLSYFL 813
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4GTV6 ((nuclear valosin-containing protein-like {ECO:0000313|RefSeq:XP_018847323.2}))
HSP 1 Score: 1132.86 bits (2929), Expect = 0.000e+0
Identity = 595/841 (70.75%), Postives = 671/841 (79.79%), Query Frame = 0
Match: A0A2I4GTV6 ((nuclear valosin-containing protein-like {ECO:0000313|RefSeq:XP_018847323.2}))
HSP 1 Score: 1132.86 bits (2929), Expect = 0.000e+0
Identity = 595/841 (70.75%), Postives = 671/841 (79.79%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAAGRDTED------------------------------------------------PLKRVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETN-ESTKVIIGGDIIGLKSESKS----TDNKSDADKT--GSKQDGENKAQAKVEVP-DNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEESE--RVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKH+ LSAL VGVG+GVGLGL SGQ +SKW +G + + A++IE EL R +VDGKES VTFD+F YY+SER R+LL SAAYVHL H D SKHTRNLS AS AILLS +E Y QMLAKAL+H+F++KLLLLDV+DFS+KMQ KYG ++E K S+S+ L R+SSL GSFSIL +T+ PLKR SSW FDEK F+QSLYKVLVS+SET SIILY+RDVE LL+ S RLYNLF+K+LK L G VL+LGS+ML+ +D R++DE++T LF Y I IKPPEDE+ L+SWKAQ+EEDMK IQ QDNKNHIAEVLAANDLEC DL SIC AD+ VL+++I+EIVVSA+++HLMNNK+PEYRNGKL+ISSKSLSHGLS FQE + GKD LK+ETN ES+K G + +G K+ESKS +NK++ +K+ G K+DGEN K EVP DNEFEKRIR EVIPANEIGVTFADIG+L E KESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFM HWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPS ESRE ILRTLLAKEKVE+LDFKELATMTEGYSGSDLK LC+TAAYRPVRELIQQER KD EKK K AEGK +E E KEE E RVITLR L+MED+RQAKNQVAASFASEGS+MSELKQWN LYGEGGSRKK+QL+YFL
Sbjct: 1 MEQKHVLLSALSVGVGLGVGLGLSSGQTVSKW--VGGNWPLDEIS---AEQIEQELMRQVVDGKESKVTFDEFPYYLSERTRVLLTSAAYVHLKHIDFSKHTRNLSPASRAILLSGPAEFYQQMLAKALAHHFESKLLLLDVSDFSLKMQSKYGCARKEPSFKRSISEITLERMSSLFGSFSILPPRGETKGTLQRQSSAMDIKSRAIEGSSNPSKIRRNASAMSDMSSISSQGAPTNPAPLKRTSSWCFDEKLFLQSLYKVLVSMSETGSIILYLRDVEHLLIPSQRLYNLFNKLLKKLSGSVLILGSRMLDPEDGCREVDERLTLLFPYNIEIKPPEDETHLVSWKAQLEEDMKMIQFQDNKNHIAEVLAANDLECDDLGSICHADTMVLSNYIEEIVVSAISYHLMNNKDPEYRNGKLVISSKSLSHGLSIFQEGTSGGKDTLKMETNAESSKETEGEEAVGAKTESKSETPGPENKNETEKSVPGMKKDGENAPAPKPEVPPDNEFEKRIRSEVIPANEIGVTFADIGALNEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMMHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREMILRTLLAKEKVENLDFKELATMTEGYSGSDLKNLCITAAYRPVRELIQQERLKDTEKKHKDAEGKSSEGTSETKEEDEKDRVITLRPLDMEDMRQAKNQVAASFASEGSIMSELKQWNDLYGEGGSRKKQQLTYFL 836
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3CWT0 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1132.47 bits (2928), Expect = 0.000e+0
Identity = 575/838 (68.62%), Postives = 666/838 (79.47%), Query Frame = 0
Match: A0A2G3CWT0 (AAA domain-containing protein {ECO:0000259|SMART:SM00382})
HSP 1 Score: 1132.47 bits (2928), Expect = 0.000e+0
Identity = 575/838 (68.62%), Postives = 666/838 (79.47%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAA-----GRDTEDP--------------------------------------------LKRVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETNESTKVIIGGDIIGLKSESKSTD--NKSDADKTGSKQDGENKAQAKVE--VPDNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKH+ LSAL VGVGVG LGL SGQ ++KW+S G D+IE ELRRL+VDGK + +TF+DF YY+SER R+LL SAAYVHLNH DVSKHTRNLS AS AILLS +ELY Q LAKAL+H+F AKLLLLD+TDFS+KMQ KYG K+E+ K S S++ LGR+SSLLGSFSIL A G + P LKR++SWS DEK F+Q+++KVLVS+SET+ +ILYIRDV++ L QS R Y LFD+MLK L G VL+LGS+M E +D ++DEK++ LF Y I+I+PPEDE+ L WK Q+EEDMK IQ QDNKNHIAEVLAANDLEC DL SIC AD+ VL+++I+EIV+SA+++HLM++K+PEYRNGKLLISS SLSHGLS FQ+ K+ +D+LK+E N +K DI GLK E+KS + ++S + +K+DG+ + +K +PDNEFEKRIRPEVIP+NEIGVTFADIG+L+ETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMV LP+ E+REKILRTLLAKEKVE LD+KELA MTEGYSGSDLK LC TAAYRPVRELIQQEREKDLEKK+++ EGK+ E + K+E+ ERVI+LR LNMED+RQAKNQVAASFASEGSVMSELKQWN LYGEGGSRKKEQLSYFL
Sbjct: 1 MEQKHVLLSALSVGVGVG--LGLASGQAVNKWTSAAE--------GITPDQIEQELRRLVVDGKHTKITFEDFPYYLSERTRVLLTSAAYVHLNHLDVSKHTRNLSPASRAILLSGPAELYQQTLAKALAHHFDAKLLLLDITDFSLKMQSKYGIFKKESGFKRSTSESTLGRLSSLLGSFSILPARENNGGSYSRQPAMFDTKSRNREGASNCIKHRRTASVSSDISSISSDSSSSSPVASLKRINSWSLDEKVFLQTVFKVLVSMSETSRVILYIRDVDRHL-QSARAYKLFDRMLKKLSGSVLVLGSRMFEHEDDCEEVDEKLSLLFPYNIDIRPPEDETHLTDWKTQLEEDMKMIQFQDNKNHIAEVLAANDLECDDLGSICHADTMVLSNYIEEIVISAISYHLMHSKDPEYRNGKLLISSNSLSHGLSVFQDGKSGCRDSLKMEANAESKDTPVDDI-GLKPETKSDNPTSESKGESGPTKKDGDISSASKAPEVIPDNEFEKRIRPEVIPSNEIGVTFADIGALDETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVSLPAVENREKILRTLLAKEKVEDLDYKELAAMTEGYSGSDLKNLCTTAAYRPVRELIQQEREKDLEKKRRAEEGKNAEGHSDKKDEAAEERVISLRPLNMEDMRQAKNQVAASFASEGSVMSELKQWNDLYGEGGSRKKEQLSYFL 826
BLAST of XM_017386490.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8FZ96 ((uncharacterized protein LOC107863184 isoform X1 {ECO:0000313|RefSeq:XP_016564486.1}))
HSP 1 Score: 1130.93 bits (2924), Expect = 0.000e+0
Identity = 576/839 (68.65%), Postives = 667/839 (79.50%), Query Frame = 0
Match: A0A1U8FZ96 ((uncharacterized protein LOC107863184 isoform X1 {ECO:0000313|RefSeq:XP_016564486.1}))
HSP 1 Score: 1130.93 bits (2924), Expect = 0.000e+0
Identity = 576/839 (68.65%), Postives = 667/839 (79.50%), Query Frame = 0
Query: 1 MEQKHIYLSALGVGVGVGVGLGLGSGQGISKWSSIGAARNSSDFAGANADEIELELRRLLVDGKESSVTFDDFTYYISERIRMLLMSAAYVHLNHSDVSKHTRNLSAASSAILLSSVSELYHQMLAKALSHYFKAKLLLLDVTDFSMKMQGKYGSCKRETPLKNSVSDTALGRVSSLLGSFSILAA-----GRDTEDP--------------------------------------------LKRVSSWSFDEKTFVQSLYKVLVSVSETNSIILYIRDVEKLLLQSPRLYNLFDKMLKNLPGPVLLLGSQMLESDDASRDIDEKVTKLFSYTINIKPPEDESALMSWKAQVEEDMKTIQSQDNKNHIAEVLAANDLECYDLDSICQADSKVLNDHIQEIVVSALTFHLMNNKEPEYRNGKLLISSKSLSHGLSFFQEEKNSGKDNLKLETN-ESTKVIIGGDIIGLKSESKSTD--NKSDADKTGSKQDGENKAQAKVE--VPDNEFEKRIRPEVIPANEIGVTFADIGSLEETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIAHDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRTGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAESREKILRTLLAKEKVEHLDFKELATMTEGYSGSDLKVLCVTAAYRPVRELIQQEREKDLEKKQKSAEGKDTENKEENKEES--ERVITLRSLNMEDLRQAKNQVAASFASEGSVMSELKQWNALYGEGGSRKKEQLSYFL 783
MEQKH+ LSAL VGVGVG LGL SGQ ++KW+S G D+IE ELRRL+VDGK + +TF+DF YY+SER R+LL SAAYVHLNH DVSKHTRNLS AS AILLS +ELY Q LAKAL+H+F AKLLLLD+TDFS+KMQ KYG K+E+ K S S++ LGR+SSLLGSFSIL A G + P LKR++SWS DEK F+Q+L+KVLVS+SET+ IILYIRDV++ L QS R Y LFD+MLK L G VL+LGS+M E +D ++DEK++ LF Y I+I+PPEDE+ LM WK Q+EEDMK I+ QDNKNHIAEVLAANDLEC DL SIC AD+ VL+++I+EIV+SA+++HLM++K+PEYRNGKLLISS SLSHGLS FQ+ K+ +D+LK+E N ES + D IG K E+KS + ++S + +K+DG+ + +K +PDNEFEKRIRPEVIP+N+IGVTFADIG+L+ETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIA++AGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR GEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMV LP+ E+REKILRTLLAKEKVE LD+KELA MTEGYSGSDLK LC TAAYRPVRELIQQEREKDLEKK+++ EGK+ E + K+E+ ERVI+LR LNMED+RQAKNQVAASFASEGSVMSELKQWN LYGEGGSRKKEQLSYFL
Sbjct: 1 MEQKHVLLSALSVGVGVG--LGLASGQAVNKWTSAAE--------GITPDQIEQELRRLVVDGKHTKITFEDFPYYLSERTRVLLTSAAYVHLNHLDVSKHTRNLSPASRAILLSGPAELYQQTLAKALAHHFDAKLLLLDITDFSLKMQSKYGIFKKESGFKRSTSESTLGRLSSLLGSFSILPARENNGGSYSRQPAMFDTKSRNREGASNCIKHRRTASVSSDISSISSDSSSSSPVASLKRINSWSLDEKVFLQTLFKVLVSMSETSRIILYIRDVDRHL-QSARAYKLFDRMLKKLSGSVLVLGSRMFEHEDDCEEVDEKLSLLFPYNIDIRPPEDETHLMDWKTQLEEDMKMIKFQDNKNHIAEVLAANDLECDDLGSICHADTMVLSNYIEEIVISAISYHLMHSKDPEYRNGKLLISSNSLSHGLSVFQDGKSGCRDSLKMEANAESMDTPV--DDIGSKPETKSDNPTSESKGESGPTKKDGDISSASKAPEVIPDNEFEKRIRPEVIPSNKIGVTFADIGALDETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVSLPAVENREKILRTLLAKEKVEDLDYKELAAMTEGYSGSDLKNLCTTAAYRPVRELIQQEREKDLEKKRRAEEGKNAEGHSDKKDEAAEERVISLRPLNMEDMRQAKNQVAASFASEGSVMSELKQWNDLYGEGGSRKKEQLSYFL 826
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6Z8N8 | E-Value: 0.000e+0, PID: 70.51 | AAA domain-containing protein {ECO:0000259|SMART:S... [more] |
| A0A5B6Z5I0 | E-Value: 0.000e+0, PID: 70.87 | AAA domain-containing protein {ECO:0000259|SMART:S... [more] |
| A0A5B6Z5N2 | E-Value: 0.000e+0, PID: 69.58 | AAA domain-containing protein {ECO:0000259|SMART:S... [more] |
| A0A5B6Z620 | E-Value: 0.000e+0, PID: 69.46 | AAA domain-containing protein {ECO:0000259|SMART:S... [more] |
| M1BRP5 | E-Value: 0.000e+0, PID: 68.97 | (ATP binding protein {ECO:0000313|EnsemblPlants:PG... [more] |
| A0A6P5TIA3 | E-Value: 0.000e+0, PID: 70.10 | (putative cell division cycle ATPase {ECO:0000313|... [more] |
| A0A2G2X6V7 | E-Value: 0.000e+0, PID: 69.45 | AAA domain-containing protein {ECO:0000259|SMART:S... [more] |
| A0A2I4GTV6 | E-Value: 0.000e+0, PID: 70.75 | (nuclear valosin-containing protein-like {ECO:0000... [more] |
| A0A2G3CWT0 | E-Value: 0.000e+0, PID: 68.62 | AAA domain-containing protein {ECO:0000259|SMART:S... [more] |
| A0A1U8FZ96 | E-Value: 0.000e+0, PID: 68.65 | (uncharacterized protein LOC107863184 isoform X1 {... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |