Resource Type:
Polypeptide
Name:
XM_017386753.1
Identifier:
XM_017386753.1-protein
Sequence:
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFE
ELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELE
RKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSK
IQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPF
IEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAK
ITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTG
LTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVA
FNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVE
TVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLK
TECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTG
SWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVT
FGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQS
LACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESE
PEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFL
PNPIIIKKRIESLIEREFLERDKEDRKLYRYLA
Sequence Length:
733
Sequence Checksum:
de5224baf9565b49e351674b5a714a58
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017386753.1, derives from mRNA, XM_017386753.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XFR5 ((cullin-3A-like isoform X1 {ECO:0000313|RefSeq:XP_009785295.1}))
HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0
Identity = 661/733 (90.18%), Postives = 696/733 (94.95%), Query Frame = 0
Match: A0A1U7XFR5 ((cullin-3A-like isoform X1 {ECO:0000313|RefSeq:XP_009785295.1}))
HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0
Identity = 661/733 (90.18%), Postives = 696/733 (94.95%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+TSHLKEIAKS+EAAQG FLEEL RKW +HNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRD+IIHSSKIQ RLQ TLLELVQ ER+GEVINRGLMRN+ KML D+G VYQEDFEKPF+EVSADFYR ESQQ+I+CCDCG+YLKKAEKRLNEEIERVSHYLD K+E+KITNVVEKEMIESHM RLVHMENSGLV M+VDDK++DLGRMY+LFRRV TGL L+RDVMTSHIRE GKQLVTDPERLKDPVDFVQRLLDEKDKHDKIIS AFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGV+EEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGF+AA+G E+ADGP+L VQVLTTGSWPTQS T CNLPPEILGVC+KFK YYLGTH+GRRLSWQTNMG ADLK TFGKGQKHELNVSTYQMCILMLFNNAD+ SYKEIEQATEIP DLKRCLQSLAC KG+NVLRKEPMSKDI EDD F+FNDKF+SKFYKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQL SRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTSHLKEIAKSIEAAQGGLFLEELNRKWAEHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDHIIHSSKIQKRLQDTLLELVQHERTGEVINRGLMRNVIKMLMDLGSSVYQEDFEKPFLEVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVSHYLDAKSESKITNVVEKEMIESHMHRLVHMENSGLVNMIVDDKYEDLGRMYNLFRRVPTGLALIRDVMTSHIREIGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHAAVGAEIADGPSLTVQVLTTGSWPTQSVTTCNLPPEILGVCDKFKTYYLGTHTGRRLSWQTNMGTADLKATFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQATEIPASDLKRCLQSLACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLNSRFLPNPVVIKKRIESLIEREFLERDKTDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3XUT4 ((cullin-3A-like {ECO:0000313|RefSeq:XP_016443630.1}))
HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0
Identity = 661/733 (90.18%), Postives = 696/733 (94.95%), Query Frame = 0
Match: A0A1S3XUT4 ((cullin-3A-like {ECO:0000313|RefSeq:XP_016443630.1}))
HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0
Identity = 661/733 (90.18%), Postives = 696/733 (94.95%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+TSHLKEIAKS+EAAQG FLEEL RKW +HNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRD+IIHSSKIQ RLQ TLLELVQ ER+GEVINRGLMRN+ KML D+G VYQEDFEKPF+EVSADFYR ESQQ+I+CCDCG+YLKKAEKRLNEEIERVSHYLD K+E+KITNVVEKEMIESHM RLVHMENSGLV M+VDDK++DLGRMY+LFRRV TGL L+RDVMTSHIRE GKQLVTDPERLKDPVDFVQRLLDEKDKHDKIIS AFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGV+EEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGF+AA+G E+ADGP+L VQVLTTGSWPTQS T CNLPPEILGVC+KFK YYLGTH+GRRLSWQTNMG ADLK TFGKGQKHELNVSTYQMCILMLFNNAD+ SYKEIEQATEIP DLKRCLQSLAC KG+NVLRKEPMSKDI EDD F+FNDKF+SKFYKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQL SRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTSHLKEIAKSIEAAQGGLFLEELNRKWAEHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDHIIHSSKIQKRLQDTLLELVQHERTGEVINRGLMRNVIKMLMDLGSSVYQEDFEKPFLEVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVSHYLDAKSESKITNVVEKEMIESHMHRLVHMENSGLVNMIVDDKYEDLGRMYNLFRRVPTGLALIRDVMTSHIREIGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHAAVGAEIADGPSLTVQVLTTGSWPTQSVTTCNLPPEILGVCDKFKTYYLGTHTGRRLSWQTNMGTADLKATFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQATEIPASDLKRCLQSLACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLNSRFLPNPVVIKKRIESLIEREFLERDKTDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J1EH37 ((Cullin 3 {ECO:0000313|EMBL:BAW00390.1}))
HSP 1 Score: 1393.25 bits (3605), Expect = 0.000e+0
Identity = 661/733 (90.18%), Postives = 696/733 (94.95%), Query Frame = 0
Match: A0A1J1EH37 ((Cullin 3 {ECO:0000313|EMBL:BAW00390.1}))
HSP 1 Score: 1393.25 bits (3605), Expect = 0.000e+0
Identity = 661/733 (90.18%), Postives = 696/733 (94.95%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLVAT+TSHLKEIAKSVEAAQG FLEEL RKW +HNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRD+IIHSSKIQ RLQ TLLELVQ+ER+GEVINRGLMRN+ KML D+G VYQEDFEKPF+EVSADFYR ESQQ+I+CCDCG+YLKKAEKRLNEEIERVSHYLD K+E KITNVVEKEMIESHMQRLV M+NSGLV M+VDDK+DDLGRMY+LFRRV TGL L+RDVMTSHIRE GKQLVTDPERLKDPVDFVQRLLDEKDKHDKIIS AFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGV+EEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGF++A+G E+ADGP+L VQVLTTGSWPTQS CNLPPEILGVC+KFK YYLGTH+GRRLSWQTNMG ADLK TFGKGQKHELNVSTYQMCILMLFNNAD+ SY+EIEQATEIP DLKRCLQSLAC KG+NVLRKEPMSKDI EDD F+FNDKF+SKFYKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQLQSRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVATMTSHLKEIAKSVEAAQGGLFLEELNRKWAEHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDHIIHSSKIQKRLQDTLLELVQQERTGEVINRGLMRNVIKMLMDLGSSVYQEDFEKPFLEVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVSHYLDTKSEPKITNVVEKEMIESHMQRLVQMDNSGLVNMIVDDKYDDLGRMYNLFRRVPTGLPLIRDVMTSHIREIGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEMVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHSAVGAEIADGPSLTVQVLTTGSWPTQSVATCNLPPEILGVCDKFKTYYLGTHTGRRLSWQTNMGTADLKATFGKGQKHELNVSTYQMCILMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKTDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IZ92 ((Cullin-3a {ECO:0000313|EMBL:OIT05856.1}))
HSP 1 Score: 1391.33 bits (3600), Expect = 0.000e+0
Identity = 659/733 (89.90%), Postives = 694/733 (94.68%), Query Frame = 0
Match: A0A1J6IZ92 ((Cullin-3a {ECO:0000313|EMBL:OIT05856.1}))
HSP 1 Score: 1391.33 bits (3600), Expect = 0.000e+0
Identity = 659/733 (89.90%), Postives = 694/733 (94.68%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+TSHLKEIAKS+EAAQG FLEEL RKW +HNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRD+IIHSSKIQ RLQ TLLELVQ ER+GEVINRGLMRN+ KML D+G VYQEDFEKPF+EVSADFYR ESQQ+I+CCDCG+YLKKAEKRLNEEIERVSHYLD K+E+KITNVVEKEMIESHM RLVHMENSGLV M+VDDK++DLGRMY+LFRRV TGL L+RDVMTSHIRE GKQLVTDPERLKDPVDFVQRLLDEKDKHDKIIS A NNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGV+EEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTM GF+AA+G E+ADGP+L VQVLTTGSWPTQS T CNLPPEILGVC+KFK YYLGTH+GRRLSWQTNMG ADLK TFGKGQKHELNVSTYQMCILMLFNNAD+ SYKEIEQATEIP DLKRCLQSLAC KG+NVLRKEPMSKDI EDD F+FNDKF+SKFYKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQL SRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTSHLKEIAKSIEAAQGGLFLEELNRKWAEHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDHIIHSSKIQKRLQDTLLELVQHERTGEVINRGLMRNVIKMLMDLGSSVYQEDFEKPFLEVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVSHYLDAKSESKITNVVEKEMIESHMHRLVHMENSGLVNMIVDDKYEDLGRMYNLFRRVPTGLALIRDVMTSHIRETGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISSALNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHGFHAAVGAEIADGPSLTVQVLTTGSWPTQSVTTCNLPPEILGVCDKFKTYYLGTHTGRRLSWQTNMGTADLKATFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQATEIPASDLKRCLQSLACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLNSRFLPNPVVIKKRIESLIEREFLERDKTDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I0T3 (CULLIN_2 domain-containing protein {ECO:0000259|PROSITE:PS50069})
HSP 1 Score: 1385.93 bits (3586), Expect = 0.000e+0
Identity = 653/733 (89.09%), Postives = 695/733 (94.82%), Query Frame = 0
Match: A0A7J7I0T3 (CULLIN_2 domain-containing protein {ECO:0000259|PROSITE:PS50069})
HSP 1 Score: 1385.93 bits (3586), Expect = 0.000e+0
Identity = 653/733 (89.09%), Postives = 695/733 (94.82%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+TSHLKEIA+S+EAAQG FLEEL RKW DHNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRDNIIHSSKIQ RLQ TLLELVQRER+GEVINRGLMRNI KML D+G VYQEDFEKPF+EVS+DFYRGESQQ+I+CCDCG+YLKKAE+RLNEEIERVSHYLD+K+EAKITNVVEKEMIESHM RLVH+ENSGLV M+VDDK++DLGRMY+LFRRV GL+++RDVMTSHIR+ GKQLVTDPERLKDPVDFVQRLLD KDKHD+IIS+AF+NDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFY++MG E+ D PTL VQVLTTGSWPTQSS CNLP EILG+CEKF+ YYLGTH+GRRLSWQTNMG+ADLK TFGKGQKHELNVSTYQMCILMLFN+ADQ SYKEIEQATEIP DLKR LQSLAC KG+NVLRKEPMSK++ EDD F FNDKFTSK YKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQLQSRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTSHLKEIARSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDNIIHSSKIQPRLQDTLLELVQRERTGEVINRGLMRNIIKMLMDLGSSVYQEDFEKPFLEVSSDFYRGESQQFIECCDCGDYLKKAERRLNEEIERVSHYLDVKSEAKITNVVEKEMIESHMNRLVHLENSGLVNMIVDDKYEDLGRMYNLFRRVSNGLSIIRDVMTSHIRDTGKQLVTDPERLKDPVDFVQRLLDVKDKHDRIISLAFSNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYSSMGAEIGDYPTLTVQVLTTGSWPTQSSATCNLPSEILGICEKFRTYYLGTHTGRRLSWQTNMGSADLKATFGKGQKHELNVSTYQMCILMLFNSADQLSYKEIEQATEIPASDLKRSLQSLACVKGKNVLRKEPMSKEVAEDDAFLFNDKFTSKLYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AMZ5 ((Putative cullin-3A-like isoform X1 {ECO:0000313|EMBL:MPA56433.1}))
HSP 1 Score: 1385.93 bits (3586), Expect = 0.000e+0
Identity = 655/733 (89.36%), Postives = 693/733 (94.54%), Query Frame = 0
Match: A0A5B7AMZ5 ((Putative cullin-3A-like isoform X1 {ECO:0000313|EMBL:MPA56433.1}))
HSP 1 Score: 1385.93 bits (3586), Expect = 0.000e+0
Identity = 655/733 (89.36%), Postives = 693/733 (94.54%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MS QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYS LV+T+TSHLKE+AKS+EAAQG FLEEL RKWTDHNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRDN+IHSSKIQTRLQ TLLELVQRER+GEVINRGLMRNI KML D+G VYQEDFEKPF+EVSADFYRGESQQ+I+CCDCG+YLKKAE+RLNEEIERVSHYLD K+EAKITNVVEKEMIE+H+ RLVHMENSGLV MLVDDK++DLGRMYSLFRRV GL+++RDVMTSHIR+ GKQLVTDPERLKDPVDFVQRLLDEKDKHDKIIS+AFNNDK FQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEED+E VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFY +MG E+ D PTL VQVLTTGSWPTQSS CNLP +ILGVC+KF+ YYLGTH+GRRL+WQTNMG ADLK TFGK +KHELNVSTYQMCILMLFN+AD SYKEIEQATEIP DLKRCLQSLAC KG+NVLRKEPMSKDI EDD FFFNDKFTSKFYKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQLQSRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSTQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSELVSTMTSHLKEMAKSIEAAQGGLFLEELNRKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDNVIHSSKIQTRLQDTLLELVQRERTGEVINRGLMRNIIKMLMDLGSSVYQEDFEKPFLEVSADFYRGESQQFIECCDCGDYLKKAERRLNEEIERVSHYLDAKSEAKITNVVEKEMIENHVYRLVHMENSGLVNMLVDDKYEDLGRMYSLFRRVPNGLSIIRDVMTSHIRDTGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISLAFNNDKAFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDIEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYTSMGAEIVDSPTLAVQVLTTGSWPTQSSATCNLPRDILGVCDKFRMYYLGTHTGRRLTWQTNMGTADLKATFGKDRKHELNVSTYQMCILMLFNSADGMSYKEIEQATEIPASDLKRCLQSLACVKGKNVLRKEPMSKDIAEDDAFFFNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EGB2 ((Cullin 3 {ECO:0000313|EMBL:GFY84939.1}))
HSP 1 Score: 1375.92 bits (3560), Expect = 0.000e+0
Identity = 651/733 (88.81%), Postives = 694/733 (94.68%), Query Frame = 0
Match: A0A7J0EGB2 ((Cullin 3 {ECO:0000313|EMBL:GFY84939.1}))
HSP 1 Score: 1375.92 bits (3560), Expect = 0.000e+0
Identity = 651/733 (88.81%), Postives = 694/733 (94.68%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVL+K+GEKLYSGLV+T+TSHLKEIAKS+EAAQG FLEEL RKW +HNKALQMIRDILMYMDRTFIPS+HKTPV+ELGL+LWRDNIIHSSKIQ+RLQ TLLELVQRER+GEVI+RGLMRNI KML D+G VY+ DFEK F++VSADFYRGESQQ+I+CCDCG+YLKKAE+RLNEEIERVSHYLD K+EAKITNVVEKEMIESHMQRLVHMENSGLV M+VDDK++DLGRMYSL RRV GL+LVRDVMTSHIRE GKQLVTDPERLKDPVDFVQRLLDEKDKHDKI+S+AF NDKTFQNALNSSFEYFINLNPRSPEF+SLFVDDKLRKGLKGVSEEDVE VLDKVMMLFRYLQEKDV+EKYYKQHLAKRLLSGKTVS+DAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYA+MG E+AD PTL VQVLTTGSWPTQSST CNLPPEILG+CE+F+ YYLGTH+GRRLSWQT MG ADLK TFGKGQKHELNVSTYQMCILMLFNNAD+ SYKEIEQATEIP DLKR LQSLAC KG+NVLRKEPMSK++ EDD FFFNDKF SK YKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQLQSRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLYKFGEKLYSGLVSTVTSHLKEIAKSIEAAQGGLFLEELSRKWAEHNKALQMIRDILMYMDRTFIPSSHKTPVHELGLSLWRDNIIHSSKIQSRLQDTLLELVQRERTGEVIDRGLMRNIIKMLMDLGSSVYKVDFEKLFLDVSADFYRGESQQFIECCDCGDYLKKAERRLNEEIERVSHYLDAKSEAKITNVVEKEMIESHMQRLVHMENSGLVNMIVDDKYEDLGRMYSLLRRVPNGLSLVRDVMTSHIRETGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIVSLAFTNDKTFQNALNSSFEYFINLNPRSPEFMSLFVDDKLRKGLKGVSEEDVEIVLDKVMMLFRYLQEKDVYEKYYKQHLAKRLLSGKTVSEDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYASMGPEIADYPTLTVQVLTTGSWPTQSSTTCNLPPEILGICERFRTYYLGTHTGRRLSWQTTMGTADLKATFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQATEIPVSDLKRSLQSLACVKGKNVLRKEPMSKEVAEDDSFFFNDKFMSKLYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RYQ4 ((Cullin-3A like {ECO:0000313|EMBL:PSS35151.1}))
HSP 1 Score: 1375.53 bits (3559), Expect = 0.000e+0
Identity = 650/733 (88.68%), Postives = 693/733 (94.54%), Query Frame = 0
Match: A0A2R6RYQ4 ((Cullin-3A like {ECO:0000313|EMBL:PSS35151.1}))
HSP 1 Score: 1375.53 bits (3559), Expect = 0.000e+0
Identity = 650/733 (88.68%), Postives = 693/733 (94.54%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+TSHLKEIAKS+EAAQG FLEEL RKW +HNKALQMIRDILMYMDRTFIPS+HKTPV+ELGLNLWRDNIIHSSKIQ+RLQ TLLELVQRER+GEVI+RGLMRNI KML D+G VYQ DFEKPF++VSADFYRGESQQ+I+CCDCG YLKKAE+RLNEEIERVS YLD K+EAKITNVVEKEMIE+HMQ LVHMENSGLV M+VDDK++DLGRMYSL RRV GL+LVRDVMTSHIRE GKQLVTDPER+KDPVDFVQRLLDEKDKHDKIIS+AF NDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEED+E VLDKVMMLFRYL+EKDV+EKYYKQHLAKRLLSG+TVS+DAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYA+MG E+AD PTL VQVLTTGSWPTQSST CNLPPEILG+CE+F+ YYLGTHSGRRLSWQTNMG +DLK TFGKGQKHELNVSTYQMCILMLFN+AD+ SYKEIEQATEIP DLKR LQSLAC KG+NVLRKEPMSK++ EDD FFFNDKF SK YKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIV EVTKQLQSRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTVTSHLKEIAKSIEAAQGSLFLEELSRKWAEHNKALQMIRDILMYMDRTFIPSSHKTPVHELGLNLWRDNIIHSSKIQSRLQDTLLELVQRERTGEVIDRGLMRNIIKMLMDLGSSVYQVDFEKPFLDVSADFYRGESQQFIECCDCGYYLKKAERRLNEEIERVSQYLDAKSEAKITNVVEKEMIENHMQSLVHMENSGLVNMIVDDKYEDLGRMYSLLRRVPNGLSLVRDVMTSHIRETGKQLVTDPERIKDPVDFVQRLLDEKDKHDKIISLAFTNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDIEIVLDKVMMLFRYLEEKDVYEKYYKQHLAKRLLSGQTVSEDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYASMGPEIADYPTLTVQVLTTGSWPTQSSTTCNLPPEILGICERFRTYYLGTHSGRRLSWQTNMGTSDLKATFGKGQKHELNVSTYQMCILMLFNSADRLSYKEIEQATEIPVSDLKRSLQSLACVKGKNVLRKEPMSKEVAEDDSFFFNDKFMSKLYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103YHC6 ((Cullin homology {ECO:0000313|EMBL:KVI09114.1}))
HSP 1 Score: 1374.76 bits (3557), Expect = 0.000e+0
Identity = 652/733 (88.95%), Postives = 693/733 (94.54%), Query Frame = 0
Match: A0A103YHC6 ((Cullin homology {ECO:0000313|EMBL:KVI09114.1}))
HSP 1 Score: 1374.76 bits (3557), Expect = 0.000e+0
Identity = 652/733 (88.95%), Postives = 693/733 (94.54%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MS+QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+T HLKEIA SVEA+QGP FLEEL RKW +HNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRDNIIHSS IQ RL+ TLLE+VQRER GEVINRGLMRNI KML D+G VYQEDFEKPF+EVSA+FY+GESQQ+I+CCDCG+YLKKAEKRLNEEIERVSHYLD K+E KITNVVEKEMIES M RLVHMENSGLV M+VDDK++DLGRMY+LFRRV GL L+RDVMTSHIRE GKQLVTDPERLKDPVDFVQRLLDEKDKHDKII++AFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS K+VSDDAERSLI+KLKTECGYQFTSKLEGMFTDMKTSQDTMQGFY AMG LADGPTL V VLTTGSWPTQSST CNLPPEIL VC+KF+ YYLGTH+GRRL+WQTNMG+ADLK TFG+GQKHELNVSTYQMC+LMLFNNAD+ SYKEIEQA EIPT +LKRCLQSLACAKG+NVLRKEPMSKDI E+D FFFNDKF+SKFYKVKIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIV EVTKQLQSRFLPNP++IKKRIESLIEREFLERD+EDRKLYRYLA
Sbjct: 1 MSSQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEIATSVEASQGPLFLEELNRKWMEHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDNIIHSSNIQIRLKDTLLEIVQRERGGEVINRGLMRNIVKMLMDLGPSVYQEDFEKPFLEVSANFYQGESQQFIECCDCGDYLKKAEKRLNEEIERVSHYLDAKSEVKITNVVEKEMIESQMSRLVHMENSGLVNMIVDDKYEDLGRMYNLFRRVPNGLFLIRDVMTSHIREMGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIINLAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSSKSVSDDAERSLILKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYEAMGPVLADGPTLSVHVLTTGSWPTQSSTACNLPPEILSVCDKFRAYYLGTHNGRRLTWQTNMGSADLKATFGRGQKHELNVSTYQMCVLMLFNNADRLSYKEIEQAVEIPTMELKRCLQSLACAKGKNVLRKEPMSKDISEEDDFFFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDREDRKLYRYLA 733
BLAST of XM_017386753.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8FQA2 ((Cullin-3 {ECO:0000313|EMBL:PHT91868.1}))
HSP 1 Score: 1372.84 bits (3552), Expect = 0.000e+0
Identity = 647/733 (88.27%), Postives = 693/733 (94.54%), Query Frame = 0
Match: A0A1U8FQA2 ((Cullin-3 {ECO:0000313|EMBL:PHT91868.1}))
HSP 1 Score: 1372.84 bits (3552), Expect = 0.000e+0
Identity = 647/733 (88.27%), Postives = 693/733 (94.54%), Query Frame = 0
Query: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGEKLYSGLVATLTSHLKEIAKSVEAAQGPSFLEELERKWTDHNKALQMIRDILMYMDRTFIPSTHKTPVNELGLNLWRDNIIHSSKIQTRLQSTLLELVQRERSGEVINRGLMRNITKMLADVGYVVYQEDFEKPFIEVSADFYRGESQQYIDCCDCGEYLKKAEKRLNEEIERVSHYLDLKTEAKITNVVEKEMIESHMQRLVHMENSGLVKMLVDDKFDDLGRMYSLFRRVQTGLTLVRDVMTSHIREAGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISVAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYAAMGGELADGPTLVVQVLTTGSWPTQSSTPCNLPPEILGVCEKFKNYYLGTHSGRRLSWQTNMGNADLKVTFGKGQKHELNVSTYQMCILMLFNNADQQSYKEIEQATEIPTPDLKRCLQSLACAKGRNVLRKEPMSKDIGEDDIFFFNDKFTSKFYKVKIGTVVAQKESEPEKLETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPIIIKKRIESLIEREFLERDKEDRKLYRYLA 733
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK+GEKLYSGLV+T+TSHLKEIAK +EA+QG FLEEL RKW +HNKALQMIRDILMYMDRTFIPSTHKTPV+ELGLNLWRD+IIH SKI RLQ TLLEL+Q ER+GEVINRGLMRN+ KML D+G VYQEDFEKPF++VSADFYR ESQQ+I+CCDCG+YLKKAEKRLNEEIERVSHYLD ++E K+TNVVEKEMIESHM RLVHM+NSGLV M+V+DK++DLGRMY+LFRRV TGL L+RDVMTSHIRE GKQLVTDPE+LKDPVDFVQRLLDEKDKHDKIIS AFNNDKTFQNALNSSFEYFINLNPRSPE+ISLFVDDKLRKGLKGV+EEDVE VLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGF+AA+G E+A+GP+L VQVLTTGSWPTQS T CNLP EILGVCEKFK YYLGTH+GRRLSWQTNMG AD+K TFGKGQKHELNVSTYQMCILMLFNNAD+ SY+EIEQATEIP DLKRCLQSLAC KG+NVLRKEPMSKDI EDD F+FNDKF+SKFYK+KIGTVVAQKESEPEK ETRQRVEEDRKPQIEAAIVRIMK+RRVLDHNNIVTEVTKQLQSRFLPNP++IKKRIESLIEREFLERDK DRKLYRYLA
Sbjct: 1 MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTSHLKEIAKFIEASQGGLFLEELNRKWAEHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDHIIHCSKIHKRLQDTLLELIQLERTGEVINRGLMRNVIKMLMDLGSSVYQEDFEKPFLDVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVSHYLDTRSEPKLTNVVEKEMIESHMHRLVHMDNSGLVNMIVNDKYEDLGRMYNLFRRVSTGLALIRDVMTSHIREIGKQLVTDPEKLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNALNSSFEYFINLNPRSPEYISLFVDDKLRKGLKGVTEEDVELVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHAAVGAEIAEGPSLTVQVLTTGSWPTQSVTTCNLPSEILGVCEKFKTYYLGTHTGRRLSWQTNMGTADVKATFGKGQKHELNVSTYQMCILMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKLKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKIDRKLYRYLA 733
| Match Name | Stats | Description |
|---|---|---|
| A0A1U7XFR5 | E-Value: 0.000e+0, PID: 90.18 | (cullin-3A-like isoform X1 {ECO:0000313|RefSeq:XP_... [more] |
| A0A1S3XUT4 | E-Value: 0.000e+0, PID: 90.18 | (cullin-3A-like {ECO:0000313|RefSeq:XP_016443630.1... [more] |
| A0A1J1EH37 | E-Value: 0.000e+0, PID: 90.18 | (Cullin 3 {ECO:0000313|EMBL:BAW00390.1})[more] |
| A0A1J6IZ92 | E-Value: 0.000e+0, PID: 89.90 | (Cullin-3a {ECO:0000313|EMBL:OIT05856.1})[more] |
| A0A7J7I0T3 | E-Value: 0.000e+0, PID: 89.09 | CULLIN_2 domain-containing protein {ECO:0000259|PR... [more] |
| A0A5B7AMZ5 | E-Value: 0.000e+0, PID: 89.36 | (Putative cullin-3A-like isoform X1 {ECO:0000313|E... [more] |
| A0A7J0EGB2 | E-Value: 0.000e+0, PID: 88.81 | (Cullin 3 {ECO:0000313|EMBL:GFY84939.1})[more] |
| A0A2R6RYQ4 | E-Value: 0.000e+0, PID: 88.68 | (Cullin-3A like {ECO:0000313|EMBL:PSS35151.1})[more] |
| A0A103YHC6 | E-Value: 0.000e+0, PID: 88.95 | (Cullin homology {ECO:0000313|EMBL:KVI09114.1})[more] |
| A0A1U8FQA2 | E-Value: 0.000e+0, PID: 88.27 | (Cullin-3 {ECO:0000313|EMBL:PHT91868.1})[more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |