Resource Type:
Polypeptide
Name:
XM_017386411.1
Identifier:
XM_017386411.1-protein
Sequence:
MATPSSLSTSLLKPDLLFRGSSNSRKLRFVKDSNRAYKSSLRVKIRAVKS
EEAVIEGVGLNGNGSYKYNGNGNGNGSLVKYVNGNGGVGSNGEVPKQKKK
KSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFV
LTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKI
GQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIF
DHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIA
EYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKD
MDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAV
ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREG
LLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERL
AAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFR
FPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVI
IKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESE
RAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGL
QVLIGLLKVKKFDQREMLITGTA
Sequence Length:
723
Sequence Checksum:
20cc42fb5aeb93fe8d37a5eb9322ac81
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017386411.1, derives from mRNA, XM_017386411.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZTJ6 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109})
HSP 1 Score: 1197.19 bits (3096), Expect = 0.000e+0
Identity = 605/769 (78.67%), Postives = 653/769 (84.92%), Query Frame = 0
Match: A0A5B6ZTJ6 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109})
HSP 1 Score: 1197.19 bits (3096), Expect = 0.000e+0
Identity = 605/769 (78.67%), Postives = 653/769 (84.92%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLRFVKDSNRAYKS--------SLRVKIRAVKSEEAVIE-----------GVGLNGNG-----SYKYNG----------------NGNGNGSLVKYVNGNG-GVGSNGEVPKQK-----KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
MAT S S P+L F +RK R + SLR +IRAV+ +E V+E G LNGNG SY YNG NG NGSLVKYVNGNG +G V + K KKK++EEIGQE+AWFK++ Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+F+VWL+NQKFSYRGGMTE KKVQRRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPS+TA++I+EEELG P+ DIF+ F+YEPIAAASLGQVHRAKLKG++VV KVQRPGLKDLFDIDLKNLRVIAEYLQK DPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFKDMDYVKVP I+W+YTTPQVLTMEYVPGIKINRIQALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS+NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERE+AT ELGFKKPL+KEE+IEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELL+FREAGVEVI+KD +K+WDRQS AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAFQRVA VQKTIGSAVAAGSLINLATIL++N IR PATVAY F A+FG QVL G+LKVKKFDQ+E LITGTA
Sbjct: 1 MATASLFSL----PELTFLLPDATRKHRVSLSKLSLSRLNSHPKSNLSLRNRIRAVQKDEIVVEEGGRELISEVNGTELNGNGYSNGKSYGYNGSVERYSNGGVGVIENENGASNGSLVKYVNGNGVALGIEEGVSESKFEEIGKKKTIEEIGQEEAWFKQSREEQIEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLTFIFKVWLNNQKFSYRGGMTEKKKVQRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSDTAVAIVEEELGAPLHDIFERFNYEPIAAASLGQVHRAKLKGQDVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKFDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKDMDYVKVPAIFWDYTTPQVLTMEYVPGIKINRIQALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISRNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKEREMATTELGFKKPLTKEERIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVIVKDLRKRWDRQSSAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGSAVAAGSLINLATILYLNSIRMPATVAYIFFAFFGFQVLFGILKVKKFDQQERLITGTA 765
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9UNF7 ((uncharacterized protein LOC105178999 {ECO:0000313|RefSeq:XP_011100883.1}))
HSP 1 Score: 1196.42 bits (3094), Expect = 0.000e+0
Identity = 610/758 (80.47%), Postives = 661/758 (87.20%), Query Frame = 0
Match: A0A6I9UNF7 ((uncharacterized protein LOC105178999 {ECO:0000313|RefSeq:XP_011100883.1}))
HSP 1 Score: 1196.42 bits (3094), Expect = 0.000e+0
Identity = 610/758 (80.47%), Postives = 661/758 (87.20%), Query Frame = 0
Query: 2 ATPSSLSTSLLKPDLLF---RGSSNSRKLRFVKDSNRAYKSSLRV---KIRAVKSEEAV-------------IEGVGLNGNGSYKYNGNGN-----GNGSLVKYVNGNGGVGSNGEVPKQK------------KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
A+ ++ ST+ P+L+F + KL + N +S++RV +IRAV+ EE+ + G +NGNGS + NG+ GNGSLVKYVNGNG +NG V + +KKS+EEIGQE+AWFK+N Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVL+F+F+ WL+NQKFSYRGGMTE KK QRRKVLAKWLKE+ILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI+EEELGGPV+DIF+ F EPIAAASLGQVHRAKLKG+EVV KVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAE FA NFKDMDYVKVPTI WEYTTPQVLTMEYVPGIKINRI+ALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLEVFYGVYEKD KVL AMVQMGVLVPTGDMTAVRRTAQFFL SFEERLAAQR+ERE+ATAELGFKKPL+KEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELL+FREAGVEVIIKDF+K+WDRQSQAFYNLFRQADRVEKLAQTI+RLEQGDLKLRVRALESERAFQRVA VQ TIGSAVAAGSLINLATIL++N I+ PAT+AYF CAYFGL+VLIG++KVKKFDQRE LITGTA
Sbjct: 3 ASFAASSTTPTLPELIFLSPHSPAKRLKLSLYRPHNLERRSNIRVLGTRIRAVQREESSTVLDERDRELVTKLNG-SVNGNGSVANHTNGSVKVESGNGSLVKYVNGNGN--ANGSVASRSELEVVEVEEVISQKKSIEEIGQEEAWFKKNGEDQVEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLSFIFKAWLNNQKFSYRGGMTEEKKSQRRKVLAKWLKENILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVSIVEEELGGPVNDIFERFDREPIAAASLGQVHRAKLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAEQFADNFKDMDYVKVPTILWEYTTPQVLTMEYVPGIKINRIKALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEVFYGVYEKDAEKVLQAMVQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREMATAELGFKKPLTKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVIIKDFRKRWDRQSQAFYNLFRQADRVEKLAQTIQRLEQGDLKLRVRALESERAFQRVAAVQNTIGSAVAAGSLINLATILYLNSIQMPATIAYFLCAYFGLKVLIGIVKVKKFDQRERLITGTA 757
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A200QT79 ((UbiB domain {ECO:0000313|EMBL:OVA13665.1}))
HSP 1 Score: 1192.56 bits (3084), Expect = 0.000e+0
Identity = 603/759 (79.45%), Postives = 651/759 (85.77%), Query Frame = 0
Match: A0A200QT79 ((UbiB domain {ECO:0000313|EMBL:OVA13665.1}))
HSP 1 Score: 1192.56 bits (3084), Expect = 0.000e+0
Identity = 603/759 (79.45%), Postives = 651/759 (85.77%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLR-----FVKDSNRAYKSSLRVKIRAVKSEEAVI---------EGVGLNGNG--SYKYNG-------------NGNG--NGSLVKYVNGNGG----VGSNGEVPKQK-KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
MAT + STS L P+LLF +LR F ++R+ KS R+++ A + E AV+ GV LNGNG Y YNG NGNG NGSLVKYVNGNG V N K+ +K +VEEIGQE+AWFK + +VSVTPGGRW++FKTYSTIQRTLEIWGFVLTF+F+ WL+NQKFSYRGGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI++EELG PVDDIFD F YEPIAAASLG+VHRA+LK +EVV KVQRPGLKDLFDIDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECA VLYQEIDYT+EAANAELFA+NFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRI+ALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AMVQMGVLVPTGD+TAVRRTAQFFL SFEERLAAQRKERE+AT ELGFKKPL+KEE+ EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP FDITEIAKPYALELL+FREAGVEVI+KDFKK+WDRQSQAFYNLFRQADRVEKLA+ I+RLEQGDLKLRVRALESERAF RVA VQKT+GSAVAAGSLINLATIL++N IR PA Y FCA+F +QVL GLLKVKK DQ+E LITGTA
Sbjct: 1 MATSLAASTSTL-PELLFLRPDTRSRLRIPLSRFQSLNSRSSKSVFRIRLGAAREEGAVVVKEEEREEVNGVYLNGNGRSGYGYNGLNGSSNGSATVILNGNGVSNGSLVKYVNGNGSATKVVEENSASKKEGGRKMNVEEIGQEEAWFKRGGRDKLEVSVTPGGRWNKFKTYSTIQRTLEIWGFVLTFLFKAWLNNQKFSYRGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVSIIQEELGAPVDDIFDRFEYEPIAAASLGKVHRARLKNQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECATVLYQEIDYTQEAANAELFANNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIKALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQAMVQMGVLVPTGDLTAVRRTAQFFLNSFEERLAAQRKEREIATTELGFKKPLTKEERTEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPLFDITEIAKPYALELLRFREAGVEVIVKDFKKRWDRQSQAFYNLFRQADRVEKLAEVIQRLEQGDLKLRVRALESERAFVRVAAVQKTVGSAVAAGSLINLATILYLNSIRVPAIAGYVFCAFFSMQVLFGLLKVKKLDQQERLITGTA 758
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZRU0 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109} (Fragment))
HSP 1 Score: 1187.56 bits (3071), Expect = 0.000e+0
Identity = 596/758 (78.63%), Postives = 650/758 (85.75%), Query Frame = 0
Match: A0A5B6ZRU0 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109} (Fragment))
HSP 1 Score: 1187.56 bits (3071), Expect = 0.000e+0
Identity = 596/758 (78.63%), Postives = 650/758 (85.75%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLRF------VKDSNRAYKSSL--RVKIRAVKSEEAVIE-------------GVGLNGNGSYKYNG--------NGNGNGSLVKYVNGNG------GVGSNGEVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
MAT +SLST P+L F +RKLR + N KS+L R ++RAV+ EE V+E G NG+ NG NG NGSL KYVNGNG G S + + +KKK++EEIGQE+AWFK + Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+F+ WL+N+KFSY+GGMTE KK QRRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPS+TA++I+EEELG P+ DIF+ F+YEPIAAASLGQVHRAKLKG++VV KVQRPGLKDLFDIDLKNLRVIAEYLQK DPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFKDMDYVKVP I+W+YTTPQVLTMEYVPGIKINRIQALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS+NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERE+AT ELGFKKPL+KEE+IEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELL+FREAGVEVI+KD +K+WDRQS AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAF+RVA VQKTIGSAVAAGSLINLATIL +N IR PAT+AY FCA+FG QVL G+LKVKK DQ+E LITGTA
Sbjct: 50 MAT-ASLSTL---PELTFLRPDTTRKLRVSLSRLSLSGINSHPKSNLLLRHRLRAVQKEEIVVEESDSELISEVNGKSYGYNGSAKTYSNGAVGVIESENGASNGSLAKYVNGNGVALEIPGGISESKSEETEKKKTIEEIGQEEAWFKRSGQDQVEVSVVPGGRWSRFKTYSTIQRTLEIWGFVLTFIFKAWLNNKKFSYKGGMTEEKKGQRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSDTAVAIVEEELGAPLHDIFERFNYEPIAAASLGQVHRAKLKGQDVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKFDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKDMDYVKVPAIFWDYTTPQVLTMEYVPGIKINRIQALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISRNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKEREMATTELGFKKPLTKEERIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVIVKDLRKRWDRQSSAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFKRVAAVQKTIGSAVAAGSLINLATILFLNSIRMPATLAYIFCAFFGFQVLFGVLKVKKLDQQERLITGTA 803
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N5GW18 ((AarF domain-containing protein kinase {ECO:0000313|EMBL:KAB2617340.1}))
HSP 1 Score: 1175.23 bits (3039), Expect = 0.000e+0
Identity = 581/717 (81.03%), Postives = 632/717 (88.15%), Query Frame = 0
Match: A0A5N5GW18 ((AarF domain-containing protein kinase {ECO:0000313|EMBL:KAB2617340.1}))
HSP 1 Score: 1175.23 bits (3039), Expect = 0.000e+0
Identity = 581/717 (81.03%), Postives = 632/717 (88.15%), Query Frame = 0
Query: 38 KSSLRVKIRAVKSEEAVIE-------GVGLNGNGS--------YKYNG----------NGNGNGSLVKYVNGNGGVGS--NG----EVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
+ +R +IRA K + V+E GV L GNG+ Y NG NG NGSLVK+VNGNG G E ++ ++K++EEIG+EDAWFK++ + +VSV PGGRWSRFKTYSTIQRTLEIWGFVL F+ + WLDNQKF+YRGGMTE KK RRK LAKWLKE+ILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPS+TAISI+EEELG PV DIFD F YEPIAAASLGQVHRA+LKG+EVV KVQRPGLKDLF+IDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECANVLY+EIDYTKEAANAELFASNFK+MDYVKVP I WEYTTPQVLTMEYVPGIKIN+IQA+DQLG+DR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTA FFL SFEERLAAQRKE+ELATAELGFKKPLSKEE+I KKK+RLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKD + +WDRQS+AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVRALESER+FQRVATVQKT+G+AVAAGSLINLATIL+IN IR PA VAY FCA+FGLQVLIGL+KVKKFD+RE LITGTA
Sbjct: 41 RGGVRSRIRATKEDGLVVEETINKVNGVELGGNGAAASTSGSDYGSNGSVNSYSNGSANGASNGSLVKFVNGNGVAAEVVEGVQVLETKEEGRRKNIEEIGKEDAWFKQSGLPKVEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLKFIIKAWLDNQKFTYRGGMTEEKKTLRRKALAKWLKENILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSDTAISIVEEELGAPVGDIFDRFDYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFNIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECANVLYEEIDYTKEAANAELFASNFKNMDYVKVPMIIWEYTTPQVLTMEYVPGIKINKIQAIDQLGLDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTALFFLNSFEERLAAQRKEKELATAELGFKKPLSKEERIMKKKERLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDLRNRWDRQSRAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRALESERSFQRVATVQKTVGNAVAAGSLINLATILYINSIRVPAIVAYVFCAFFGLQVLIGLIKVKKFDERERLITGTA 757
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3S3P6A1 ((UbiB domain-containing protein {ECO:0000313|EMBL:RWR84048.1}))
HSP 1 Score: 1174.07 bits (3036), Expect = 0.000e+0
Identity = 586/744 (78.76%), Postives = 639/744 (85.89%), Query Frame = 0
Match: A0A3S3P6A1 ((UbiB domain-containing protein {ECO:0000313|EMBL:RWR84048.1}))
HSP 1 Score: 1174.07 bits (3036), Expect = 0.000e+0
Identity = 586/744 (78.76%), Postives = 639/744 (85.89%), Query Frame = 0
Query: 1 MATPSSLSTSL-----LKPDLLFRGSSNSRKLRFVKDSNRAYKSSLRVKIRAVKSEEAVIEGVGLNGNGS-YKY---------------NGNGNGNGSLVKYVNGNGGVGSNGEVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
MA P + +T L P L F+ + S + RF SNR S+ ++R +S V++ NGNGS + Y NGNG NGSLVKYVNGNG EV K+KK+VEEIGQEDAWFK+ + +VSVTPGGRW+RFKTYSTIQRTLEIWGFV+TF+F+ WL+NQKFSY+GGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI++EELG +DDIFD F YEPIAAASLGQVHRAKLKG EVV KVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEA NAELFA NFK DYVKVPTIYW+YTTPQVLTMEYVPGIKINRI+ALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDD NGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERE+ATA LGFKKPLSKEE+ EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA+ELL+FREAGVEVI+KDFKK+W+RQS+AFYNLFRQADRVE+LA+ I+RLEQGDLKLRVRALESERAF+RVA VQKT+G+AVAAGSLINLATI ++N IR PA AY CA+F +Q+L G+LKVKK DQ+E LITGTA
Sbjct: 1 MAAPLAAATQLPFLLPRTPLLRFQFQNRSCR-RFRTGSNRIRISA--AQVREEESSSNVMDDYNWNGNGSGFGYSGSVEASNGSLKGFLNGNGASNGSLVKYVNGNGAAKMPEEV---KRKKTVEEIGQEDAWFKQGGKEKIEVSVTPGGRWNRFKTYSTIQRTLEIWGFVITFIFKAWLNNQKFSYKGGMTEKKKALRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVSIIKEELGASLDDIFDRFDYEPIAAASLGQVHRAKLKGEEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAENAELFAENFKGFDYVKVPTIYWDYTTPQVLTMEYVPGIKINRIRALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDFNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKEREMATAALGFKKPLSKEERNEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYAMELLRFREAGVEVIVKDFKKRWERQSRAFYNLFRQADRVERLAEIIQRLEQGDLKLRVRALESERAFKRVAAVQKTVGNAVAAGSLINLATIFYLNSIRVPAMAAYTLCAFFSIQILFGILKVKKLDQQERLITGTA 738
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: G7LB96 ((ABC transporter-like protein {ECO:0000313|EMBL:AET04576.1}) (Putative cadmium-transporting ATPase {ECO:0000313|EMBL:RHN42985.1}) (3.6.3.46 {ECO:0000313|EMBL:RHN42985.1}))
HSP 1 Score: 1172.53 bits (3032), Expect = 0.000e+0
Identity = 576/703 (81.93%), Postives = 628/703 (89.33%), Query Frame = 0
Match: G7LB96 ((ABC transporter-like protein {ECO:0000313|EMBL:AET04576.1}) (Putative cadmium-transporting ATPase {ECO:0000313|EMBL:RHN42985.1}) (3.6.3.46 {ECO:0000313|EMBL:RHN42985.1}))
HSP 1 Score: 1172.53 bits (3032), Expect = 0.000e+0
Identity = 576/703 (81.93%), Postives = 628/703 (89.33%), Query Frame = 0
Query: 41 LRVKIRAVKSEEAVIE------------GVGLNG-NGSYKYNGNGNGNGSLVKYVNGNGG----VGSNGEVPKQK---KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
L +IRA+K E A++E G +NG NGS + NG GNGSLVKYVNGNG V E K+K +KK +EEIG+EDAWFK+N Q +V+V PGGRWSRFKTYSTIQRTLEIWGFV+ F+F+ WL+ QKFSY+GGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDIL QEYVDQLSELQDQVPPFPSETA++I+EEELG P+ IFD F YEPIAAASLGQVHRA+L+G+EVV KVQRPGLKDLFDIDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFK+MDYVKVP+IYW+YTTPQ+LTMEYVPGIKIN+IQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLE FYGVYEK P+KVLDAM+QMGVLVPTGDMTAVRRTAQFFL SFEERLAAQR+E+E+ AE+GFKKPLSKEE++ KKK+RLAAIGEDLL+IAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKD KK+WDRQSQAFYNLFRQADRVEKLA IERLEQGDLKLRVRALESERAFQR+ATVQKTIG+AV AGSLINLATIL +N IR PAT+AYFFCA FG QVL+G++K+KK D+RE LITGTA
Sbjct: 33 LPTQIRALKEEGALVEERIVSDVKWSGNGTVVNGSNGSVRGYVNGGGNGSLVKYVNGNGVAVEVVEDFVETSKRKEVGRKKRLEEIGKEDAWFKQNGEPQVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVIQFIFKSWLNRQKFSYKGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAMAIVEEELGAPIAGIFDQFDYEPIAAASLGQVHRARLRGQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMDYVKVPSIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEAFYGVYEKSPDKVLDAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREKEMEAAEVGFKKPLSKEEQVMKKKERLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDIKKRWDRQSQAFYNLFRQADRVEKLANVIERLEQGDLKLRVRALESERAFQRIATVQKTIGNAVGAGSLINLATILSLNSIRVPATIAYFFCAIFGFQVLLGIVKIKKLDERERLITGTA 735
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4H1V3 ((protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like {ECO:0000313|RefSeq:XP_018850122.1}))
HSP 1 Score: 1170.22 bits (3026), Expect = 0.000e+0
Identity = 583/754 (77.32%), Postives = 642/754 (85.15%), Query Frame = 0
Match: A0A2I4H1V3 ((protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like {ECO:0000313|RefSeq:XP_018850122.1}))
HSP 1 Score: 1170.22 bits (3026), Expect = 0.000e+0
Identity = 583/754 (77.32%), Postives = 642/754 (85.15%), Query Frame = 0
Query: 7 LSTSLLKPDLLFRGSSNSRKLRFVKDS-----NRAYKSSLRVKIRAVKSEEAVIEGVGL-------NGNG-------------SYKYNGNGN------GNGSLVKYVNGNGG-----VGSNGEVPKQK-KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
++ SL P+L+F ++ K R N + S R +IRAV E ++E NGNG S ++ NG+ NGSLVKYVNGNG V V K+ +K+ +EEIG+EDAWFK + +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+F+ WL+N+KFSYRGG+TE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI+EEELG P+ DIFD F YEPIAAASLGQVHRA+LKG+EVV KVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFK+MDYVKVP+IYWEYTTPQVLTMEYVPGIKIN+IQALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERLAAQRKERELAT E GFKKPLSK+E++ KKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA+ELL+F+EAGVEVI+KDF+K+WDRQS+AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAFQRVA VQ+T+G+AVAAGSLINLATIL+ N IR PAT+AY FCA+FG QVL G++KVKK D+RE L+TGTA
Sbjct: 1 MAASLTLPELIFLSPQSTPKHRLFLSHMSVSRNLRCRPSFRNRIRAVSEEGLLVEERERQLIKELKNGNGAASAATGDTRYGVSTEWYSNGSVGVSERENGSLVKYVNGNGVAAAELVEEEDTVSKEDGRKRRIEEIGKEDAWFKGSGKESIEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLTFIFKAWLNNKKFSYRGGITEEKKALRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAMSIVEEELGAPLSDIFDQFEYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMDYVKVPSIYWEYTTPQVLTMEYVPGIKINKIQALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRKERELATMEPGFKKPLSKDERVMKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYAMELLRFKEAGVEVILKDFRKRWDRQSRAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQRTVGNAVAAGSLINLATILYFNSIRVPATIAYVFCAFFGFQVLFGIIKVKKLDERERLVTGTA 754
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D8YVM3 ((Ubiquinone biosynthesis protein {ECO:0000313|EMBL:TEY22478.1}))
HSP 1 Score: 1166.37 bits (3016), Expect = 0.000e+0
Identity = 587/769 (76.33%), Postives = 645/769 (83.88%), Query Frame = 0
Match: A0A4D8YVM3 ((Ubiquinone biosynthesis protein {ECO:0000313|EMBL:TEY22478.1}))
HSP 1 Score: 1166.37 bits (3016), Expect = 0.000e+0
Identity = 587/769 (76.33%), Postives = 645/769 (83.88%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLRFVKDSNRAYKSSLRV--KIRAVKSEEAVIEGVGLNGNGSYKYNGNGNGNGSLVKYVNGNGGVGS-----------NGEVPKQ---------------------------KKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIK------DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
MAT S S++L P+L+F NS K + S +S+ ++ +IRA++ E++V+E + + K NG+ NGN Y + NG VGS NG + + +KKSVEEIGQE+AWFK+ Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+FRVWL+NQKFSY+GGMTE K+VQRRKVLAKWLKE+ILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA++I+EEELG PV+DIF+ F +EPIAAASLGQVHRA+LKG E+V KVQRPGLKDLFDIDLKNLRVIAEYLQK+DPKSDGAKRDWV+IYDECANVLYQEIDYTKEA+NAE FA+NFKDMDYVKVP+IYWEYTTPQVLTMEYVPGIKINR QALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDD NGGRLIFYDFGMMGSIS+NIREGLLEVFYGVYEKDP KVL AMVQMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERELA ELGFKKPLSKEE EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEV++K DF+K+WDRQS A +NLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAFQRVATVQ TIGSA+AAGSL+NLATILH+N I+ PA +AY CAYF L+VLIGL+KVKKFDQRE LITGTA
Sbjct: 1 MATFSIFSSTL--PELIFLSPHNSTKRLKLFLSRAGPRSNAKILGRIRAIQREDSVLEA--RDRELAAKLNGSVNGN-----YSSRNGSVGSYGNESVKSESENGSLARYVNGNGNGNGSVGSGNAVLEAVEMEEVVSEKKSVEEIGQEEAWFKQGGGDQVEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLTFIFRVWLNNQKFSYKGGMTEQKRVQRRKVLAKWLKENILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVAIVEEELGAPVNDIFERFDHEPIAAASLGQVHRARLKGEELVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVSIYDECANVLYQEIDYTKEASNAEQFATNFKDMDYVKVPSIYWEYTTPQVLTMEYVPGIKINRTQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDFNGGRLIFYDFGMMGSISRNIREGLLEVFYGVYEKDPEKVLQAMVQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKERELAKQELGFKKPLSKEEASEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVVVKASFWNTDFRKRWDRQSSAVFNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFQRVATVQNTIGSAIAAGSLVNLATILHLNSIQMPANIAYIICAYFSLKVLIGLVKVKKFDQRERLITGTA 760
BLAST of XM_017386411.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1BU11 ((uncharacterized protein LOC111005545 {ECO:0000313|RefSeq:XP_022132764.1}))
HSP 1 Score: 1165.98 bits (3015), Expect = 0.000e+0
Identity = 583/761 (76.61%), Postives = 648/761 (85.15%), Query Frame = 0
Match: A0A6J1BU11 ((uncharacterized protein LOC111005545 {ECO:0000313|RefSeq:XP_022132764.1}))
HSP 1 Score: 1165.98 bits (3015), Expect = 0.000e+0
Identity = 583/761 (76.61%), Postives = 648/761 (85.15%), Query Frame = 0
Query: 7 LSTSLLKPDLLF--------RGSSNSRKLRFVKDSNRAYKSSLRVKIRAVKSEEAVIE------------------GVGLNGNGSYKYNGNGNG------------NGSLVKYVNGNG------GVGSNGEVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 723
++TSL P+L+F SS R + + LR K+RA++ + V++ G NGNG Y+YNG NG NGSLVKYVNGNG G E ++ +KK +EEIG+EDAWFK+++ Q +VSV PGGRW+RFKTYSTIQRTLEIWGFV TF+ + WL+NQKF+YRGGMTE KKV RRK+LAKWLKE+ILRLGPTFIKIGQQFSTRVDIL QEYVDQLSELQDQVPPFPSETAISI+EEELGGP+ +IFD F +EPIAAASLGQVHRA+LKG+EVV KVQRP LK+LFDIDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFK +DYVKVP+IYW+YTTPQVLTMEYVPGIKIN+I+ALDQLG+DRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERLAAQR+ERE+ATAELGFKKPL+KEEKI KKK+RLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEV++KDF+K+WDRQS+AFYNLFRQA+RVEKLA+ I+RLEQGDLKLRVRALESERAFQRVATVQK +GSA+AAGSLINL TIL IN IR PAT+AY FCA+FG QVL+GL+KVK+ D+RE LITGTA
Sbjct: 1 MATSLPLPELVFVSPKRLLSPSSSRCSLYRIHLSRSCRFNVVLRTKVRALREDGVVVDERESELLREVNGYGLGGNGAAYNGNGDYRYNGWVNGGVTVVESEKGVSNGSLVKYVNGNGVAATVVGEIQASESKEEGRKKRIEEIGKEDAWFKQSDQQQIEVSVAPGGRWNRFKTYSTIQRTLEIWGFVFTFIIKAWLNNQKFTYRGGMTEEKKVARRKILAKWLKENILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAISIVEEELGGPLANIFDRFDHEPIAAASLGQVHRARLKGQEVVVKVQRPSLKELFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKSLDYVKVPSIYWDYTTPQVLTMEYVPGIKINKIKALDQLGIDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISSNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREMATAELGFKKPLTKEEKIMKKKERLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVVLKDFRKRWDRQSRAFYNLFRQAERVEKLAEIIQRLEQGDLKLRVRALESERAFQRVATVQKMLGSAIAAGSLINLGTILSINSIRMPATIAYIFCAFFGFQVLLGLVKVKRLDERERLITGTA 761
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZTJ6 | E-Value: 0.000e+0, PID: 78.67 | ABC1 domain-containing protein {ECO:0000259|Pfam:P... [more] |
| A0A6I9UNF7 | E-Value: 0.000e+0, PID: 80.47 | (uncharacterized protein LOC105178999 {ECO:0000313... [more] |
| A0A200QT79 | E-Value: 0.000e+0, PID: 79.45 | (UbiB domain {ECO:0000313|EMBL:OVA13665.1})[more] |
| A0A5B6ZRU0 | E-Value: 0.000e+0, PID: 78.63 | ABC1 domain-containing protein {ECO:0000259|Pfam:P... [more] |
| A0A5N5GW18 | E-Value: 0.000e+0, PID: 81.03 | (AarF domain-containing protein kinase {ECO:000031... [more] |
| A0A3S3P6A1 | E-Value: 0.000e+0, PID: 78.76 | (UbiB domain-containing protein {ECO:0000313|EMBL:... [more] |
| G7LB96 | E-Value: 0.000e+0, PID: 81.93 | (ABC transporter-like protein {ECO:0000313|EMBL:AE... [more] |
| A0A2I4H1V3 | E-Value: 0.000e+0, PID: 77.32 | (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chlorop... [more] |
| A0A4D8YVM3 | E-Value: 0.000e+0, PID: 76.33 | (Ubiquinone biosynthesis protein {ECO:0000313|EMBL... [more] |
| A0A6J1BU11 | E-Value: 0.000e+0, PID: 76.61 | (uncharacterized protein LOC111005545 {ECO:0000313... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |