Resource Type:
Polypeptide
Name:
XM_017387377.1
Identifier:
XM_017387377.1-protein
Sequence:
MESSSSPLKSNPTAEEETSSRRIQRLSLHLNPPPSENSAMEMATCAARAK
LNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMK
QLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWG
GSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDP
LTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGV
HAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNL
LNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAV
TIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLL
VEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGY
AAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVT
WNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAA
VRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDAS
SRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVR
NITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGFQ
Sequence Length:
690
Sequence Checksum:
608e0a15b953aa7ded46ac14632eb694
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017387377.1, derives from mRNA, XM_017387377.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q9SDY4 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1378.62 bits (3567), Expect = 0.000e+0
Identity = 654/686 (95.34%), Postives = 670/686 (97.67%), Query Frame = 0
Match: Q9SDY4 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1378.62 bits (3567), Expect = 0.000e+0
Identity = 654/686 (95.34%), Postives = 670/686 (97.67%), Query Frame = 0
Query: 7 PLKSNPTAE--EETSSRRIQRLSLHLNPPPSENSAMEMATCAARAKLNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGFQ 690
PL SNPTAE ++T++RRIQRLSLHLNP ++N+ +EM TCAARAKLNVNTTQL+L MRGKHRD+QEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIK FKYVV+DPFVYFAI EAAGSVDVSFGIKLGVQYSLWGGSV+NLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQT+ATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDA G+SDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILK+AVTIATRYSLFRQQFGPPKQAEISILDYQS QHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVT YTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFI AVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEY Q VGFQ
Sbjct: 8 PLHSNPTAENDDQTTARRIQRLSLHLNPTLTDNTTIEMVTCAARAKLNVNTTQLTLFMRGKHRDLQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKPFKYVVDDPFVYFAIGEAAGSVDVSFGIKLGVQYSLWGGSVLNLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTVATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDARGYSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKVAVTIATRYSLFRQQFGPPKQAEISILDYQSHQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTGYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFIKAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYRQHVGFQ 693
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BY08 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1221.45 bits (3159), Expect = 0.000e+0
Identity = 572/684 (83.63%), Postives = 624/684 (91.23%), Query Frame = 0
Match: A0A5J5BY08 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1221.45 bits (3159), Expect = 0.000e+0
Identity = 572/684 (83.63%), Postives = 624/684 (91.23%), Query Frame = 0
Query: 11 NPTAEEETS--SRRIQRLSLHLNPPPSE---NSAMEMATCAARAKLNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
NPTAE+E +RRIQRLSLHLNP P+ S ++M +CAARAKLNV+T LS MRGKHRDIQE+V+E+F SRPDLQTP+EIS + HRELCM+QLL LVREAGI+ F+YV EDP YFAIAEA GSVD+S GIK+GVQYSLWGG+V+NLGTKKH DKY++ IDN+EYPGCFAMTELHHGSNVQGLQT+ATFDPLTDEF+IDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHD G SDMGVHAFIVPIRD++TH+ LPG+EI DCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+RDG YTS LP+INKRFAA LGELVGGRVGLAYSSVG++KIAVTIA RYSL RQQFGPPKQ EISILDYQS QHKLMPMLASTYAFHFATL LVEKYSEMKK+HDE++V DVHALSAGLKAYVTSYT+KSLSICRE+CGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVA DLLKQYKEKF+GGTL VTWNYLRESMN+YLSQPNP+T+RWEGEDHLRDPKFQLDAFRYRTSRLLQS AVRL+KHSKNLG FGAWNRCLNHLLTLAESHIESVIL FI AV++CPDA + AALKLVCDLYA+DRIW DIGTYRNVDY+APNKAKAIHKLTEYLSFQVRNI RELVDAFD+PD+V RAPIG Q+ EAY +Y Q VGF
Sbjct: 8 NPTAEDEDQPITRRIQRLSLHLNPAPNRCLPRSDLQMLSCAARAKLNVSTQHLSDYMRGKHRDIQERVFEYFNSRPDLQTPVEISKDDHRELCMRQLLGLVREAGIRPFRYVAEDPSKYFAIAEAVGSVDMSLGIKMGVQYSLWGGTVLNLGTKKHTDKYYEGIDNMEYPGCFAMTELHHGSNVQGLQTVATFDPLTDEFIIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDTKGVSDMGVHAFIVPIRDLKTHQMLPGIEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSILPSINKRFAAMLGELVGGRVGLAYSSVGVIKIAVTIAIRYSLLRQQFGPPKQPEISILDYQSHQHKLMPMLASTYAFHFATLHLVEKYSEMKKSHDEQVVGDVHALSAGLKAYVTSYTAKSLSICRESCGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAMDLLKQYKEKFQGGTLAVTWNYLRESMNSYLSQPNPVTTRWEGEDHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKNLGSFGAWNRCLNHLLTLAESHIESVILSKFIEAVQSCPDAGACAALKLVCDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIARELVDAFDLPDYVTRAPIGMQSTAEAYLQYTQFVGF 691
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BD48 ((Putative acyl-coenzyme A oxidase 2, peroxisomal-like {ECO:0000313|EMBL:MPA66779.1}) (1.3.3.6 {ECO:0000313|EMBL:MPA66779.1}) (Fragment))
HSP 1 Score: 1216.83 bits (3147), Expect = 0.000e+0
Identity = 573/689 (83.16%), Postives = 628/689 (91.15%), Query Frame = 0
Match: A0A5B7BD48 ((Putative acyl-coenzyme A oxidase 2, peroxisomal-like {ECO:0000313|EMBL:MPA66779.1}) (1.3.3.6 {ECO:0000313|EMBL:MPA66779.1}) (Fragment))
HSP 1 Score: 1216.83 bits (3147), Expect = 0.000e+0
Identity = 573/689 (83.16%), Postives = 628/689 (91.15%), Query Frame = 0
Query: 9 KSNPTAEE--ETSSRRIQRLSLHLNPPPSEN---SAMEMATCAARAKLNVNTTQLSLLMRG---KHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
K N TAE+ + +RR+QRLSLHLNP P+ S +++ +CAARAKLNV+T LS MRG KHRDIQE+V+E+F SRPDLQTP+EIS + +RELCMKQLL LVREAGI+ KYVVEDP Y AI EA GSVD+S GIK+GVQYSLWGG+V+NLGTKKHRDKYF+ IDN++YPGCFAMTELHHGSNVQGLQT+ATFDPLTDEF+IDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHD G SDMGVHAFIVPIRD++THETLPG+EI DCGHKVGLNGVDNGAL+F SVRIPRDNLLNRFGDV+RDG YTSSLP++NKRFAA LGELVGGRVGLAYSSVG+LKIAVTIA RYSL RQQFGPPKQ EISILDYQS QHKLMPMLASTYAFHFATL LVEKYSEMKK+HDE++V DVHALSAGLKAYVTSYT+KSLSICRE+CGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKF+GGTLTVTWNYLRESMN+YLSQPNP+TSRWEG+DHLRDPKFQLDAFRYRTSRLLQS AVRL+KHSKNLG FGAWNRCLNHLLTLAESHIESVIL FI AV++CPD S+RAALKL+CDLYA+DRIWNDIGTYRNVDY+APNKAKAIHKLTEYLSFQVRNI RELVDAF++PD+V RAPIG Q+ EAY +Y Q VGF
Sbjct: 30 KPNQTAEDGDQPIARRVQRLSLHLNPTPNHRLPLSDLQLLSCAARAKLNVSTEDLSDYMRGNLGKHRDIQERVFEYFNSRPDLQTPVEISKDDYRELCMKQLLGLVREAGIRPLKYVVEDPSKYLAIGEAVGSVDMSLGIKMGVQYSLWGGTVLNLGTKKHRDKYFEGIDNMDYPGCFAMTELHHGSNVQGLQTVATFDPLTDEFIIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDTKGVSDMGVHAFIVPIRDLKTHETLPGIEIHDCGHKVGLNGVDNGALRFHSVRIPRDNLLNRFGDVSRDGKYTSSLPSVNKRFAAMLGELVGGRVGLAYSSVGVLKIAVTIAIRYSLLRQQFGPPKQPEISILDYQSHQHKLMPMLASTYAFHFATLHLVEKYSEMKKSHDEQVVGDVHALSAGLKAYVTSYTAKSLSICRESCGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFQGGTLTVTWNYLRESMNSYLSQPNPVTSRWEGKDHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKNLGSFGAWNRCLNHLLTLAESHIESVILSKFIEAVQSCPDESARAALKLLCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIARELVDAFNLPDYVTRAPIGMQSTAEAYLQYTQCVGF 718
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9UHM9 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1215.29 bits (3143), Expect = 0.000e+0
Identity = 568/694 (81.84%), Postives = 626/694 (90.20%), Query Frame = 0
Match: A0A6I9UHM9 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1215.29 bits (3143), Expect = 0.000e+0
Identity = 568/694 (81.84%), Postives = 626/694 (90.20%), Query Frame = 0
Query: 4 SSSPLKSNPTAEEETSS--------RRIQRLSLHLNPPPSENSAMEMATCAARAKLNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
S P SN TAEE+ S RR++RL LHLNPPP + +E+A CA RAK +VNT QLS MRGK+RD+Q+KVY++F SRP+LQTP+EIS ++HRELCM+QL+ LVREAGI+ F+YVVE+P YFAI EA GSVD+S GIK+GVQYSLWGGSV+NLGTKKHRDKYF+ IDNVEYPGCFAMTELHHGSNVQGLQT+ATFDP+ DEF+IDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHD G +DMGVHAFIVPIRDM+TH+ LPGVEI DCGHKVGLNGVDNGAL+FRSVRIPRD+LLNRFGDV+RDG YTSSLP+INKRFAATLGELVGGRVGLAYSSVG+LKIAV IA RYSL RQQFGPPK EISILDYQSQQHKLMPMLASTYAFHFATL L++KYSEMKKTHDE+LV DVHALSA LK+YVTSYT+KSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVA LLKQYKEKF+GGTLTVTWNYLRESMN+YLSQPNP+T+RWEGEDHLRDPKFQLDAFRYRTSRLLQS AVRL+KHSK LG FGAWNRCLNHLLTLAESHIESVIL FI+AV++CPD SSRAALKL+CDLYA+DRIWNDIGTYRNVDY+APNKAKAIHKLTEYL FQV+NI+RELVDAFD+PD+V RAPIG Q EAY++Y Q GF
Sbjct: 3 SHEPKTSNSTAEEDGCSNWDRAVVARRVERLFLHLNPPPEFSDGVELARCAGRAKSDVNTEQLSKYMRGKYRDVQQKVYDYFNSRPELQTPLEISKDEHRELCMRQLMGLVREAGIRPFRYVVEEPAKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVLNLGTKKHRDKYFEGIDNVEYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDTKGVADMGVHAFIVPIRDMKTHKPLPGVEIHDCGHKVGLNGVDNGALRFRSVRIPRDDLLNRFGDVSRDGKYTSSLPSINKRFAATLGELVGGRVGLAYSSVGVLKIAVIIAVRYSLLRQQFGPPKAPEISILDYQSQQHKLMPMLASTYAFHFATLDLIDKYSEMKKTHDEQLVGDVHALSAVLKSYVTSYTAKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGYLLKQYKEKFQGGTLTVTWNYLRESMNSYLSQPNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIDAVRSCPDPSSRAALKLLCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLCFQVKNISRELVDAFDLPDYVTRAPIGMQAAEEAYAQYTQFAGF 696
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A830CUX2 ((Acyl-coenzyme a oxidase 2 peroxisomal {ECO:0000313|EMBL:GFQ00005.1}))
HSP 1 Score: 1211.44 bits (3133), Expect = 0.000e+0
Identity = 563/689 (81.71%), Postives = 628/689 (91.15%), Query Frame = 0
Match: A0A830CUX2 ((Acyl-coenzyme a oxidase 2 peroxisomal {ECO:0000313|EMBL:GFQ00005.1}))
HSP 1 Score: 1211.44 bits (3133), Expect = 0.000e+0
Identity = 563/689 (81.71%), Postives = 628/689 (91.15%), Query Frame = 0
Query: 10 SNPTAEEETSS--------RRIQRLSLHLNPPPSENSAMEMATCAARAKLNV-NTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
SNP AE + S RRIQRLSLHL+PPP + A+ M CAARA++++ NT QLS MRGK+RD+Q+ VY++F SRP+LQTP+EIS + HR+LCM+QL+ LVREAGIK F+Y+VEDP YFAI EA GSVD+S GIK+GVQYSLWGGSV+NLGTKKHRDKYFD IDN+EYPGCFAMTELHHGSNVQGLQT+ATFDP+ DEF+I+TPNDGAIKWWIGNAAVHGKFATVFAKL+LPTHDA G SDMGVHAFIVPIRDM+TH+TLPGVEI DCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+RDG YTS+LP+I+KRFAATLGELVGGRVGLAYSSVG+LKIAV IA RYSL RQQFGPPK+AEISILDYQSQQHKLMPMLASTYAFHFATL LV+ YSEMKKTHDE+LV DVHALSAGLKAYVTSYT+KSLS+CREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVA LLKQY+EKF+GGTLTVTWNYLR+SMN+YLSQPNP+T+RWEGEDHLRDPKFQLDAFRYRTSRLLQS AVRL+KH+K LGGFGAWNRCLNHLLTLAESHIE+VIL FI+AV++CPDA SRAALKLVCDLYA+DRIWNDIGTYRNVDY+APNKAKAIHKL+EYLSFQV+NI +ELVDAFD+PD+V RAPIG Q +AY++Y Q GF
Sbjct: 16 SNPAAEIDQFSTPYRAIVARRIQRLSLHLSPPPEFSGAVAMVPCAARARIDMKNTEQLSAYMRGKYRDVQQMVYDYFNSRPELQTPLEISKDDHRDLCMRQLMGLVREAGIKPFRYIVEDPAKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVLNLGTKKHRDKYFDGIDNMEYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLILPTHDAKGVSDMGVHAFIVPIRDMKTHKTLPGVEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSTLPSISKRFAATLGELVGGRVGLAYSSVGVLKIAVIIAVRYSLLRQQFGPPKKAEISILDYQSQQHKLMPMLASTYAFHFATLHLVDIYSEMKKTHDEQLVGDVHALSAGLKAYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGYLLKQYQEKFQGGTLTVTWNYLRDSMNSYLSQPNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHTKTLGGFGAWNRCLNHLLTLAESHIETVILAKFIDAVRSCPDAKSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLSEYLSFQVKNIAKELVDAFDLPDYVTRAPIGMQAAEDAYTQYTQFAGF 704
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I7I7 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1211.05 bits (3132), Expect = 0.000e+0
Identity = 568/686 (82.80%), Postives = 624/686 (90.96%), Query Frame = 0
Match: A0A7J7I7I7 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1211.05 bits (3132), Expect = 0.000e+0
Identity = 568/686 (82.80%), Postives = 624/686 (90.96%), Query Frame = 0
Query: 11 NPTAEEETS--SRRIQRLSLHLNPPPSE-----NSAMEMATCAARAKLNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
N TAE++ SRRIQRLSLHLNPPP A+E+ CA+R KL+V+T QLS MRGKHRDIQE+V+E+F SRPDLQTP+EIS + HRELCM+QLL LVREAGI+ F+YV +DP YFAIAEA GSVD+SFGIK+GVQYSLWG SV+NLGTKKH+DKYF+ IDN++Y GCFAMTELHHGSNVQGLQT+ATFDPLTDEF+I+T NDGAIKWWIGNAAVHGKFATVFAKLML T+D G SDMGVHAFIVPIRD++TH+TLPGVEI DCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+R+G YTSSL TINKRFAA LGELVGGRVGLAYSS G+LKI++TIA RYSL RQQFGPP+Q EISILDYQS QHKLMPMLASTYAFHFATL L+EKYSEMKK+HDE++VADVHALSAGLKAYVTSYT+KSLSICRE+CGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKF+GGTL VTWNYLRESMN+YLSQPNP+T+RWEGEDHLRDP FQLDAFRYRTSRLLQS AVRL+KHSKNLGGFGAWNRCLNHLLTLAESHIESVIL FI AV++CPD +SRAALKLVCDLYA+DRIWNDIGTYRNVDY+APNKAKAIHKLTEYL FQVRNI RELVDAFD+PDHV RAPIGKQ+ E YS+Y Q VGF
Sbjct: 22 NQTAEDDDQPISRRIQRLSLHLNPPPIHPDRQVADALELQLCASRTKLSVSTQQLSDYMRGKHRDIQERVFEYFNSRPDLQTPVEISKDDHRELCMRQLLGLVREAGIRPFRYVADDPSKYFAIAEAVGSVDMSFGIKMGVQYSLWGASVLNLGTKKHKDKYFEGIDNLDYLGCFAMTELHHGSNVQGLQTIATFDPLTDEFIINTSNDGAIKWWIGNAAVHGKFATVFAKLMLTTNDTKGVSDMGVHAFIVPIRDLKTHQTLPGVEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSREGKYTSSLSTINKRFAALLGELVGGRVGLAYSSNGVLKISITIAVRYSLLRQQFGPPRQPEISILDYQSHQHKLMPMLASTYAFHFATLHLLEKYSEMKKSHDEQVVADVHALSAGLKAYVTSYTAKSLSICRESCGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFEGGTLAVTWNYLRESMNSYLSQPNPVTARWEGEDHLRDPNFQLDAFRYRTSRLLQSVAVRLRKHSKNLGGFGAWNRCLNHLLTLAESHIESVILAKFIEAVQSCPDPTSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLCFQVRNIARELVDAFDLPDHVTRAPIGKQSTAEVYSQYTQIVGF 707
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A222YRX3 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1211.05 bits (3132), Expect = 0.000e+0
Identity = 568/686 (82.80%), Postives = 624/686 (90.96%), Query Frame = 0
Match: A0A222YRX3 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1211.05 bits (3132), Expect = 0.000e+0
Identity = 568/686 (82.80%), Postives = 624/686 (90.96%), Query Frame = 0
Query: 11 NPTAEEETS--SRRIQRLSLHLNPPPSE-----NSAMEMATCAARAKLNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
N TAE++ SRRIQRLSLHLNPPP A+E+ CA+R KL+V+T QLS MRGKHRDIQE+V+E+F SRPDLQTP+EIS + HRELCM+QLL LVREAGI+ F+YV +DP YFAIAEA GSVD+SFGIK+GVQYSLWG SV+NLGTKKH+DKYF+ IDN++Y GCFAMTELHHGSNVQGLQT+ATFDPLTDEF+I+T NDGAIKWWIGNAAVHGKFATVFAKLML T+D G SDMGVHAFIVPIRD++TH+TLPGVEI DCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+R+G YTSSL TINKRFAA LGELVGGRVGLAYSS G+LKI++TIA RYSL RQQFGPP+Q EISILDYQS QHKLMPMLASTYAFHFATL L+EKYSEMKK+HDE++VADVHALSAGLKAYVTSYT+KSLSICRE+CGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKF+GGTL VTWNYLRESMN+YLSQPNP+T+RWEGEDHLRDP FQLDAFRYRTSRLLQS AVRL+KHSKNLGGFGAWNRCLNHLLTLAESHIESVIL FI AV++CPD +SRAALKLVCDLYA+DRIWNDIGTYRNVDY+APNKAKAIHKLTEYL FQVRNI RELVDAFD+PDHV RAPIGKQ+ E YS+Y Q VGF
Sbjct: 22 NQTAEDDDQPISRRIQRLSLHLNPPPIHPDRQVADALELQACASRTKLSVSTQQLSDYMRGKHRDIQERVFEYFNSRPDLQTPVEISKDDHRELCMRQLLGLVREAGIRPFRYVADDPSKYFAIAEAVGSVDMSFGIKMGVQYSLWGASVLNLGTKKHKDKYFEGIDNLDYLGCFAMTELHHGSNVQGLQTIATFDPLTDEFIINTSNDGAIKWWIGNAAVHGKFATVFAKLMLTTNDTKGVSDMGVHAFIVPIRDLKTHQTLPGVEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSREGKYTSSLSTINKRFAALLGELVGGRVGLAYSSNGVLKISITIAVRYSLLRQQFGPPRQPEISILDYQSHQHKLMPMLASTYAFHFATLHLLEKYSEMKKSHDEQVVADVHALSAGLKAYVTSYTAKSLSICRESCGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFEGGTLAVTWNYLRESMNSYLSQPNPVTARWEGEDHLRDPNFQLDAFRYRTSRLLQSVAVRLRKHSKNLGGFGAWNRCLNHLLTLAESHIESVILAKFIEAVQSCPDPTSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLCFQVRNIARELVDAFDLPDHVTRAPIGKQSTAEVYSQYTQIVGF 707
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4GNC3 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 567/686 (82.65%), Postives = 616/686 (89.80%), Query Frame = 0
Match: A0A2I4GNC3 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 567/686 (82.65%), Postives = 616/686 (89.80%), Query Frame = 0
Query: 8 LKSNPTAEEETS--SRRIQRLSLHLNPPPSENSAMEM--ATCAARAKLNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
L N T +EE RRIQRLSLHL P P + +++ TCAAR KLNV+ LS MRGKHRDIQEKV+ FF +RP+LQTP+EIS + HRELCM+QLLALVREAG++ FKYV ++P YFAI EA GSVD+S GIK+GVQYSLWGGSV+NLGTKKH+ KY+D IDN+EYPGCFAMTELHHGSNVQGLQT+ATFDP+TDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHD G SDMGVHAF+VPIRD++TH+TLPG+EI DCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+RDG YTSSLPTINKRFAATLGELVGGRVGLAYSSVG+LKIA TIA RYSL RQQFGPPKQ E+SILDYQSQQHKLMPMLASTYAFHFATL LVE YSEMKK+HDE+LV DVHALSAGLKAYVTSYT+KSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKF+GGTL VTWNYLRESMN YLSQPNP+T+RWE EDHLRDPKFQLDAFRYRTSRLLQS AVRL KH+K LG FGAWNRCLNHLLTLAESHIESVIL FI +VK+CPDASSRAALKLVCDLYA+DRIW DIGTYRNVDY+APNKAKAIHKL EYLSFQVRNI EL+DAFD+PDHV RAPI Q+ +AYS+Y Q VGF
Sbjct: 6 LNRNWTEDEENQPIGRRIQRLSLHLTPVPRQLGDLQLRTLTCAARTKLNVDAKSLSFFMRGKHRDIQEKVFYFFNARPELQTPVEISKDDHRELCMRQLLALVREAGVRPFKYVTDEPSKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVLNLGTKKHKVKYYDGIDNMEYPGCFAMTELHHGSNVQGLQTVATFDPITDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDTKGVSDMGVHAFVVPIRDLKTHQTLPGIEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAFHFATLHLVEIYSEMKKSHDEQLVGDVHALSAGLKAYVTSYTAKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFQGGTLAVTWNYLRESMNTYLSQPNPVTARWESEDHLRDPKFQLDAFRYRTSRLLQSVAVRLNKHTKTLGNFGAWNRCLNHLLTLAESHIESVILAKFIESVKSCPDASSRAALKLVCDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLAEYLSFQVRNIAGELIDAFDLPDHVTRAPIAMQS--DAYSQYTQYVGF 689
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A178UA38 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 564/689 (81.86%), Postives = 623/689 (90.42%), Query Frame = 0
Match: A0A178UA38 (Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168})
HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 564/689 (81.86%), Postives = 623/689 (90.42%), Query Frame = 0
Query: 9 KSNPTAEEET----SSRRIQRLSLHLNP---PPSENSAMEMATCAARAK-LNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
+ NP EEE+ ++RRIQRLSLHL+P P ++ TC+AR+K L+VN LSL MRGKH DIQEK+++FF SRPDLQTPIEIS + HRELCM QL+ LVREAG++ F+YV +DP YFAI EA GSVD+S GIK+GVQYSLWGGSVINLGTKKHRDKYFD IDN++Y GCFAMTELHHGSNVQGLQT ATFDPL DEFVIDTPNDGAIKWWIGNAAVHGKFATVFA+L+LPTHD+ G SDMGVHAFIVPIRDM+TH+TLPGVEIQDCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+RDGTYTSSLPTINKRF ATLGELVGGRVGLAY+SVG+LKI+ TIA RYSL RQQFGPPKQ E+SILDYQSQQHKLMPMLASTYA+HFAT+ LVEKYSEMKKTHDE+LVADVHALSAGLK+YVTSYT+K+LS+CREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLK+YKEKF+GGTLTVTW+YLRESMN YLSQPNP+T+RWEGEDHLRDPKFQLDAFRYRTSRLLQ+ A RLQKHSK LGGFGAWNRCLNHLLTLAESHIE+VIL FI AVKNCPD S++AALKL CDLYA+DRIW DIGTYRNVDY+APNKAKAIHKLTEYLSFQVRN+ +ELVDAF++PDHV RAPI Q+ +AYS+Y Q VGF
Sbjct: 6 EKNPMTEEESDGLIAARRIQRLSLHLSPSLTPSPSLPLVQTETCSARSKKLDVNGEALSLYMRGKHIDIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRYVADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPTHDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGTYTSSLPTINKRFGATLGELVGGRVGLAYASVGVLKISATIAIRYSLLRQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAYHFATVYLVEKYSEMKKTHDEQLVADVHALSAGLKSYVTSYTAKALSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKRYKEKFQGGTLTVTWSYLRESMNTYLSQPNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIETVILAKFIEAVKNCPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELVDAFELPDHVTRAPIAMQS--DAYSQYTQVVGF 692
BLAST of XM_017387377.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: O65201 (Acyl-coenzyme A oxidase 2, peroxisomal (AOX 2) (1.3.3.6) (Long-chain acyl-CoA oxidase) (AtCX2) (Precursor))
HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 564/689 (81.86%), Postives = 623/689 (90.42%), Query Frame = 0
Match: O65201 (Acyl-coenzyme A oxidase 2, peroxisomal (AOX 2) (1.3.3.6) (Long-chain acyl-CoA oxidase) (AtCX2) (Precursor))
HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 564/689 (81.86%), Postives = 623/689 (90.42%), Query Frame = 0
Query: 9 KSNPTAEEET----SSRRIQRLSLHLNP---PPSENSAMEMATCAARAK-LNVNTTQLSLLMRGKHRDIQEKVYEFFRSRPDLQTPIEISTEKHRELCMKQLLALVREAGIKAFKYVVEDPFVYFAIAEAAGSVDVSFGIKLGVQYSLWGGSVINLGTKKHRDKYFDAIDNVEYPGCFAMTELHHGSNVQGLQTLATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDANGFSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVDNGALKFRSVRIPRDNLLNRFGDVARDGTYTSSLPTINKRFAATLGELVGGRVGLAYSSVGILKIAVTIATRYSLFRQQFGPPKQAEISILDYQSQQHKLMPMLASTYAFHFATLLLVEKYSEMKKTHDEELVADVHALSAGLKAYVTSYTSKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYKEKFKGGTLTVTWNYLRESMNAYLSQPNPLTSRWEGEDHLRDPKFQLDAFRYRTSRLLQSAAVRLQKHSKNLGGFGAWNRCLNHLLTLAESHIESVILETFINAVKNCPDASSRAALKLVCDLYAMDRIWNDIGTYRNVDYMAPNKAKAIHKLTEYLSFQVRNITRELVDAFDMPDHVIRAPIGKQTPVEAYSEYIQQVGF 689
+ NP EEE+ ++RRIQRLSLHL+P P ++ TC+AR+K L+VN LSL MRGKH DIQEK+++FF SRPDLQTPIEIS + HRELCM QL+ LVREAG++ F+YV +DP YFAI EA GSVD+S GIK+GVQYSLWGGSVINLGTKKHRDKYFD IDN++Y GCFAMTELHHGSNVQGLQT ATFDPL DEFVIDTPNDGAIKWWIGNAAVHGKFATVFA+L+LPTHD+ G SDMGVHAFIVPIRDM+TH+TLPGVEIQDCGHKVGLNGVDNGAL+FRSVRIPRDNLLNRFGDV+RDGTYTSSLPTINKRF ATLGELVGGRVGLAY+SVG+LKI+ TIA RYSL RQQFGPPKQ E+SILDYQSQQHKLMPMLASTYA+HFAT+ LVEKYSEMKKTHDE+LVADVHALSAGLK+YVTSYT+K+LS+CREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLK+YKEKF+GGTLTVTW+YLRESMN YLSQPNP+T+RWEGEDHLRDPKFQLDAFRYRTSRLLQ+ A RLQKHSK LGGFGAWNRCLNHLLTLAESHIE+VIL FI AVKNCPD S++AALKL CDLYA+DRIW DIGTYRNVDY+APNKAKAIHKLTEYLSFQVRN+ +ELVDAF++PDHV RAPI Q+ +AYS+Y Q VGF
Sbjct: 6 EKNPMTEEESDGLIAARRIQRLSLHLSPSLTPSPSLPLVQTETCSARSKKLDVNGEALSLYMRGKHIDIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRYVADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPTHDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGTYTSSLPTINKRFGATLGELVGGRVGLAYASVGVLKISATIAIRYSLLRQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAYHFATVYLVEKYSEMKKTHDEQLVADVHALSAGLKSYVTSYTAKALSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKRYKEKFQGGTLTVTWSYLRESMNTYLSQPNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIETVILAKFIEAVKNCPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELVDAFELPDHVTRAPIAMQS--DAYSQYTQVVGF 692
| Match Name | Stats | Description |
|---|---|---|
| Q9SDY4 | E-Value: 0.000e+0, PID: 95.34 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| A0A5J5BY08 | E-Value: 0.000e+0, PID: 83.63 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| A0A5B7BD48 | E-Value: 0.000e+0, PID: 83.16 | (Putative acyl-coenzyme A oxidase 2, peroxisomal-l... [more] |
| A0A6I9UHM9 | E-Value: 0.000e+0, PID: 81.84 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| A0A830CUX2 | E-Value: 0.000e+0, PID: 81.71 | (Acyl-coenzyme a oxidase 2 peroxisomal {ECO:000031... [more] |
| A0A7J7I7I7 | E-Value: 0.000e+0, PID: 82.80 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| A0A222YRX3 | E-Value: 0.000e+0, PID: 82.80 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| A0A2I4GNC3 | E-Value: 0.000e+0, PID: 82.65 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| A0A178UA38 | E-Value: 0.000e+0, PID: 81.86 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR00... [more] |
| O65201 | E-Value: 0.000e+0, PID: 81.86 | Acyl-coenzyme A oxidase 2, peroxisomal (AOX 2) (1.... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |