XM_017386115.1

Resource Type: 
Polypeptide
Name: 
XM_017386115.1
Identifier: 
XM_017386115.1-protein
Sequence: 
MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSE
LESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIR
DPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDAL
RHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSR
NKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTT
LRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARW
YRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKA
KDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVD
NSLDEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSG
NVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS
GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHMLSPCTGGAQPVS
CVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQN
LEEELFQISAESYSTASTDSNTSDSDDDSAEFCTPQVDASFIDEPLDKSV
DEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKEPYS
SELLQDMFCNVQQEGDCRKNKNCKRISRRRVVSLVDRDAADDEGVPLPET
LDASRVDVVDITKRLISLDSDIHTCENAGLTSHSEPSGNILSETKSGYLG
SDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSE
QKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR
Sequence Length: 
893
Sequence Checksum: 
9cf16e0573b6111e55f4cd660a79d1be
View location in JBrowse: 
DCARv2_Chr3:38150600..38158294-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017386115.1, derives from mRNA, XM_017386115.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BDX5 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8541365.1}))

HSP 1 Score: 940.643 bits (2430), Expect = 0.000e+0
Identity = 531/926 (57.34%), Postives = 652/926 (70.41%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS------GRQYYDPISDVSTTLSMRHVDVEGIPFVEG--------SNSSPRHMLSPCTGGAQPVSCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEF--CTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHL-LDSDARQISGITEDKEPYSSELLQ-----DMFCNVQQEGDCRKNKNCKRISRRRVVSLVDRDAADDEGVP---LPETLDASRVDVVDITKR--LISLDS-----DIHTCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRYLESLVKFVDK AG LI+GT+ LKLNPVGLHYVQSRLEAL+ELESLL GAPVDYLRAY+SDLGDHRA+EQLRRILRLLTSLKVVSVLP   RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CH+STDALRHVFASRIAEIK+SPQWNRL+ VSCACNGL+LMDESLQLLPVV+TLDLSRNKFT+VDNLRKC  LKHLDLGFNHLRTIAS +E+SC++VKLVLRNNALTTL GIENL SLEGLDLSYNI+SNFSELEIL+GL  LKSLWLEGNPLCCARWYR+QVFSFFP P +++LD+K++ + EFW+RQIIIA R  RPASFGFY  AKD+   E  I+TK KK+SRLA IE EEQS ++C D ESV C+ EI  K +N++ DE+ EIV L+NRIE+MK+E S LWL+E KEW+N   +  ++ A     +++P + N  +   +++ LG+SS+YV+DS H S  +SS   LE D  F+        QY+D + + ++   M H  V  +P VE          + S    LS       P S        +  + +V  L  ID+IMES SS+AC  SPP Y+EDILHRR NLEEE  Q+SAESYS AS+DSNTS S+++  EF    PQVD S I+E  +KSVD    +V  S +  Y K+++  + T NG     +S   Q+ G     + + ++        ++   V+QE D  + K CKR  +RRV+SL++    DD+  P   L   L   R DV D   +     +DS     + +TC+NA + S       ILS TKS  L  DD I ++ NSNVA+  VQETCRQYV C+         +E E+ +L SS+ KLY+LLI   +DGS T+L L+GCHKIEDV+EVLVGLGL +VR
Sbjct:    1 MAIVTGDRYLESLVKFVDKQAGQLIEGTLVLKLNPVGLHYVQSRLEALNELESLLTGAPVDYLRAYVSDLGDHRAIEQLRRILRLLTSLKVVSVLPQPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHDSTDALRHVFASRIAEIKNSPQWNRLSFVSCACNGLVLMDESLQLLPVVDTLDLSRNKFTKVDNLRKCNKLKHLDLGFNHLRTIASFSEVSCQIVKLVLRNNALTTLHGIENLKSLEGLDLSYNIISNFSELEILAGLPSLKSLWLEGNPLCCARWYRSQVFSFFPRPDKVKLDEKQICKSEFWERQIIIASRQKRPASFGFYSPAKDDTEFEGTIDTKRKKLSRLALIECEEQSTNICLDQESVSCDIEIQSKEENAISDEEGEIVGLMNRIEVMKKEHSVLWLQEFKEWMNQASEDVMNRA-----ILNPSKENYLKDKIKHKHLGESSRYVSDSVHASGDESSTNILESDNSFADAAGSNSHQYFDRLGEATSKFFMGHTSVNSVPMVERMDPEQENLKSYSNEEFLSKKARNLNPESFAAAGGCRMDARNSVTSLTVIDDIMESHSSSACPGSPPRYEEDILHRRHNLEEEFLQLSAESYSVASSDSNTSYSEEECTEFGPLIPQVDWSLIEEFSEKSVDGHS-SVLLSEDTYYDKKHEGSEVTQNGFCAERNSGTLQLVGPDCSLQLWGNDFPAGGGDGEIAHFVKQEADWLEKKRCKRKPKRRVISLLEEYNMDDKTEPSQRLNGDLHICR-DVEDEQGKQDYHGIDSQKSIDEKYTCKNA-IASTLTNGSRILSRTKSSCLRIDDVIEDYLNSNVAEFGVQETCRQYVLCNCIFEQKPGYREREVALLLSSKHKLYVLLIDATHDGSGTSLRLMGCHKIEDVREVLVGLGLQVVR 918
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HYG8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5957883.1}))

HSP 1 Score: 937.947 bits (2423), Expect = 0.000e+0
Identity = 515/933 (55.20%), Postives = 645/933 (69.13%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECD-------PGFSGRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHM--------LSPCTGGAQPVSCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEF--CTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKEP-YSSELLQDMFCNVQ----------QEGDCRKNKNCKRISRRRVVSLV----DRDAADDEGVPLPETLDASRVDVVDITKRLISLDSDIHTC-------ENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRYLESLVKFV+K AG LI+GT+ LKLNPVGLHYVQSRLEAL+ELE LL GAPVDYLRAY+SDLGDHRALEQLRRILRLLTSLKVVSVLP   RDPTRLSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRHVFASRIAEIKDSPQWNRL+ VSCACNGL+LMDESLQLL VVETLDLSRNKF +VDNLRKC  LKHLDLGFNHL TIAS +++SC++ +LVLRNNALTTLRGIENL SLEGLDLSYN++SNFSELEILSGL  L++LW EGNPLCCARWYRAQVFSFF  P ++ LD+K++   EFWKRQIIIA R  RPAS+GFY  AK    LE  INT+ KK SRLA IESEEQ+  + SD ESV CENE   K DN + D + EIV L+NRIE MK+ERS+LWL+E K+W+N D ++  D  +Y+  +++P++ +     ++++ LG+SS+YV++S   S  +S+   LE D        GF+  QY+  IS+ ++  S+ H     +P V   +     M        LS   G + P +  V E + +  K +     AID+I ES++ +    SPPHYQEDILHRR NLEEE  Q+SAESYS AS+DSNTS  +DD  EF   +P  D S I+E  ++       ++ +  +  Y K  +V + T NG +LLDS A+   G+ +  EP + S+L ++ F + +          QEG+  + K CKR  +RR++ L     + D   +  + L   LD  R+D ++  +R   L   +          + A  TS +     ILS  +S    ++DFI N+FNSNVAD  V ETCR+Y+RC+  I      +E E+ VL SSE+KLY+L+I    DGS T+L  +GCHKIEDV+EVLV LGL ++R
Sbjct:    1 MAVVTGDRYLESLVKFVEKQAGALIEGTLVLKLNPVGLHYVQSRLEALNELEGLLAGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPTPARDPTRLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKLICHNSTDALRHVFASRIAEIKDSPQWNRLSFVSCACNGLVLMDESLQLLSVVETLDLSRNKFAKVDNLRKCTRLKHLDLGFNHLSTIASFSKVSCQIGRLVLRNNALTTLRGIENLKSLEGLDLSYNVISNFSELEILSGLPSLQNLWFEGNPLCCARWYRAQVFSFFLDPDKLTLDEKKICTREFWKRQIIIASRQKRPASYGFYSPAKSGTELEGSINTERKKHSRLACIESEEQTLYIGSDRESVSCENETQSKEDNVISDGEAEIVGLMNRIEFMKKERSALWLQEFKDWLNQDSENFTDSTKYNVTILNPNKEHDLLQKTKHRHLGESSRYVSESFQASGDESTTNILESDSSFADVSSGFNVHQYFGQISEAASKFSLGHNSGNSVPGVGRMDIKQEQMKSYSNDGCLSVRAGNSHPDALAVTEGERMDAKISTATTNAIDDIFESRAPSVSPVSPPHYQEDILHRRHNLEEEFLQLSAESYSVASSDSNTSCGEDDLTEFGPFSPVGDQSLIEEFSERGGHP---SICHPEDRYYDKGNEVSQLTQNGVYLLDSYAKLAPGVLKLTEPDHISKLWKNNFPSCEHDDGIAHCGNQEGEWLEKKICKRKPKRRLLFLSKLNNNTDGKMEPSLKLNGDLDV-RIDSMEYERRRQILCGSVQQSIDKKQIWDIAITTSLANDGVRILSGLQSSSARAEDFIENYFNSNVADLGVHETCRKYMRCNCIIELKSGYEETEVAVLLSSERKLYVLVIDVANDGSGTSLRQMGCHKIEDVREVLVSLGLQLLR 929
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834GAF4 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7125006.1}))

HSP 1 Score: 922.154 bits (2382), Expect = 0.000e+0
Identity = 517/943 (54.83%), Postives = 639/943 (67.76%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFV-------EGSNSSP----------RHMLSP-CTGGAQPVSCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEFCTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKR----YDVPKPTHNGNHLLDSDARQISGITEDKEPYSSELLQDMFCNVQ----------QEGDCRKNKNCKRISRRRVVSLV-DRDAADDEGVP---LPETLDASRVDVVDITKRLISLDSDIHTCENAGLT------SHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRYLESLVKFV+K AG LIDG + LKLNPVGLHYVQSR EAL+ELE LL GAPVDYLRAY+SDLGDHRALEQLRRILRLLTSLKVVSVLP   RDPT +SL PF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRH+FASRIAEIKDS  WNRL+ VSCACNGL+LMDESLQLLPVVETLDLSRNKF +VD LR+C  LKHLDLGFNHLRTI SL+E+SC++VKLVLRNNA++TLRGIENL SLEGLDLSYN++SNFSELEILSGL  L+SLWLEGNPL CARWYRA VFSFF  P +++LD+KR+   EFWK QIIIA R  RPASFGFY  AKD+  LE  INTK KK SRLA+IE EEQ+  + SD +SV CENE   K +N + DE+ EIV L+NRIE MK+ERS+LWL E K+W++ + ++  D A+Y+ ++ +P++ + P+  +R +  G+SS+YV+DS   S  +SS   LE D  F+        RQY+D I++ ++  SM H     +  V       E  N+ P           + L P   GGA+ +      N+ +T      P  AI +IMES+S + C  SPPHYQ+DILHRR  LEEE  Q+SAESYS AS+DS+TS S+DD  +F       SFI E     ++EF     +     +++R    ++V     NG HL  S A Q SGI   +  +S +LL+D   N +          QE D  + KNC+R  +RR +  V ++++ D  G P   L   +D     V D  +R I   S +H+ +    +      S S     I S + S  L ++DF  N FNS + D  V ETCR+YV+C+  I       E E+VVL SSE KLY+LLI+   DGS  +L L+GCHKIEDV+EVLVGLGL I+R
Sbjct:    1 MAVVTGDRYLESLVKFVEKQAGPLIDGALVLKLNPVGLHYVQSRFEALAELEGLLAGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPAPARDPTPVSLWPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHIFASRIAEIKDSLHWNRLSFVSCACNGLVLMDESLQLLPVVETLDLSRNKFAKVDYLRRCTRLKHLDLGFNHLRTIVSLSEVSCQIVKLVLRNNAISTLRGIENLKSLEGLDLSYNLISNFSELEILSGLQSLQSLWLEGNPLSCARWYRAHVFSFFRHPDKVELDEKRICTREFWKSQIIIASRQKRPASFGFYSPAKDDTELEGTINTKRKKHSRLASIECEEQAMQIGSDQDSVSCENETLSKEENDISDEETEIVGLMNRIEYMKKERSALWLLEFKDWLDQESENFTDKAKYNASISNPEREHNPKLRTRQRHHGESSRYVSDSFQASGDESSTNILESDSSFADNYSVLHARQYFDRINEAASKFSMEHTSRNSVSAVGKMDLKQEQMNTYPNDSCFAIGAGNYCLDPLAIGGAEKIDA----NNKIT------PKNAIVDIMESRSPSICPGSPPHYQQDILHRRNYLEEEFLQLSAESYSVASSDSDTSLSEDDFTKF------GSFIPEGDQSKIEEFSDRSGHLSRHQFEERHNMGHEVSPLMQNGVHLSASYAEQASGILASE--HSPQLLRDNIQNSECDDAIVHCGKQEADWLERKNCRRKPKRRFILPVEEKNSVDGSGHPSLKLDGDVDNGTNRVEDERRREIH-GSVLHSIDKKKTSDIGIPASRSHNGVRIFSGSDSVSLVAEDFFGNLFNSTIGDLGVHETCREYVQCNCIIEQKSGFGEAEVVVLLSSELKLYVLLINAANDGSGISLKLMGCHKIEDVREVLVGLGLQILR 924
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4E0W0 ((Uncharacterized protein {ECO:0000313|EMBL:THG08845.1}))

HSP 1 Score: 916.761 bits (2368), Expect = 0.000e+0
Identity = 513/947 (54.17%), Postives = 642/947 (67.79%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNE--------------LSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECD-------PGFSGRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHM--------LSPCTGGAQPVSCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEF--CTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKEP-YSSELLQDMFCNVQ----------QEGDCRKNKNCKRISRRRVVSLV----DRDAADDEGVPLPETLDASRVDVVDITKRLISLDSDI-------HTCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRYLESLVKFV+K AG LI+GT+ LKLNPVGLHYVQSRLEAL+ELE LL GAPVDYLRAY+SDLGDHRALEQLRRILRLLTSLKVVSVLP   RDPTRLSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRHVFASRIAEIKDSPQWNRL+ VSCACNGL+LMDESLQLLPVVETLDLSRNKF +VDNLRKC  LKHLDLGFNHL TIAS ++              +SC++ +LVLRNNALTTLRGIENL SLEGLDLSYN++SNFSELE LSGL  L++LWLEGNPLCCARWYRAQ FSFF  P ++ LD+K++   EFWKRQIIIA R  RPAS+GFY  AK    LE  INT+ KK SRLA IESEEQ+  + SD ESV CENE   K DN + D + EIV L+NRIE MK+ERS+LWL E K+W+N D ++  D  +Y+  +++P++ +     ++++ LG+SS+YV++S   S  +S+   LE D        GF+  QY+  IS+ ++  S+ H     +P V   +     M        LS   G + P +  V E + +  K +      ID+I ES++ +    SPPHYQEDILHRR NLEEE  Q+SAESYS AS+DSNTS  +DD  EF   +P  D S I+E  ++       ++ +  +  Y K  +V + T NG +LLDS A+   G+ +  EP + S+L ++ F + +          QEG+  + K CKR  +RR++ L     + D   +  + L   LD   +D ++  +R   L   +          + A  TS +     ILS  +S  + ++DFI N+FNSNVAD  V ETCR+Y+RC+  I      +E E+ VL SSE+KLY+L+I    DGS T+L  +GCHKIEDV EVLV LGL ++R
Sbjct:    1 MAVVTGDRYLESLVKFVEKQAGALIEGTLVLKLNPVGLHYVQSRLEALNELEGLLAGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPTPARDPTRLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKLICHNSTDALRHVFASRIAEIKDSPQWNRLSFVSCACNGLVLMDESLQLLPVVETLDLSRNKFAKVDNLRKCTRLKHLDLGFNHLSTIASFSKVRVIATMISFLSIAVSCQIGRLVLRNNALTTLRGIENLKSLEGLDLSYNVISNFSELETLSGLPSLQNLWLEGNPLCCARWYRAQAFSFFLDPDKLTLDEKKICTREFWKRQIIIASRQKRPASYGFYSPAKSGTELEGSINTERKKHSRLACIESEEQTLYIGSDQESVSCENETQSKEDNVISDGEAEIVGLMNRIEFMKKERSALWLREFKDWLNQDSENFTDSTKYNVTILNPNKEHDLLQKTKHRHLGESSRYVSESFQASGDESTTNILESDSSFADVSSGFNVHQYFGQISEAASKFSLGHNSGNSVPGVGRMDIKQEQMKSYSNDGCLSVRAGNSHPDALAVTEGERMDAKISTATTNTIDDIFESRAPSVSPVSPPHYQEDILHRRHNLEEEFLQLSAESYSVASSDSNTSCGEDDLTEFGPFSPVGDQSLIEEFSERGGHP---SICHPEDRYYDKGNEVSQLTQNGVYLLDSYAKLAPGVLKLTEPDHISKLWKNNFPSCEHDDGIAHCGNQEGEWLEKKICKRKPKRRLLFLSKLNNNTDGKMEPSLKLNGDLDVC-IDSMEYERRRQILCGSVQQSIDKKQIWDIAITTSLANDGVRILSGLQSSSVRAEDFIENYFNSNVADLGVHETCRKYMRCNCIIELKSGYEETEVAVLLSSERKLYVLVIDVANDGSGTSLRQMGCHKIEDV-EVLVSLGLQLLR 942
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PTW3 ((Serine/threonine-protein kinase 11-interacting protein {ECO:0000313|EMBL:PSR96515.1}))

HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0
Identity = 510/931 (54.78%), Postives = 633/931 (67.99%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHMLSPCTGGAQPVSC-------VVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEF--CTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKE-----------PYSSELLQDMFCNVQQEGDCRKNKNCKRISRRRVVSLV-DRDAADDEGVP---LPETLDASRVDVVDITKR---LISLDSDI---HTCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRY+ESLVKFV+K  G LI+GT+ LKLNPVGLHY QSRLEALSEL+ LL    VDYLRAY+SDLGDHR LEQLRRILRLLTSLKVVSVLP   RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRH+FASRIAEIKDSPQWNRL+ VSCACNGL+LMDESLQLLPVVETLDLSRNKF +VDN+RKCI LKHLDLGFNHLRTI+S +E+S R+VKLVLRNNALTTLRG+ENL SLEGLDLSYN++SNFSELEIL+GL  L++LWLEGNPLCC+RWYR QVFSFF  P ++ LD+K++S  EFWK QIIIA R  RPASFGFY  AK    LE PINTK KK SRLA IESEE +    SD ESV CENE   K +N + DE+ EIV L+N+IEL+K+ERS+LWL E K+W+N +P+   D ++Y  ++++PD+    +  +  + LG+SS+YV+DS   S  +SS+  LE D  F+         QY D I++ ++  S  H  V  +P  E  N     M S  + G  P           V  ++    K +    + ID+I+ES   + C  SPPHYQEDILHRR NL EE  Q+SAESYS AS+DS+TS S+ D  +F     + D S I+E   +S  E         +  Y K +++ + T N  +L DS  +Q SG+ +  E           P+S    + + C  +Q  D  +NKNCKR  +RR++ L  D +  + +  P       LD     V D   R     S+   I    T +NA  +S S     ILS++ S  LG++D + N+FNSNVAD  V ETCR+Y+RC+  I  N   +E E+ VL SSEQKLY+LLI +  DGS  +L L+GCH+I+DV+E+ VGLGL I+R
Sbjct:    1 MAVVTGDRYIESLVKFVEKQTGQLIEGTLVLKLNPVGLHYAQSRLEALSELDGLL---AVDYLRAYVSDLGDHRTLEQLRRILRLLTSLKVVSVLPSPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHIFASRIAEIKDSPQWNRLSFVSCACNGLILMDESLQLLPVVETLDLSRNKFAKVDNIRKCIRLKHLDLGFNHLRTISSFSEVSGRIVKLVLRNNALTTLRGVENLKSLEGLDLSYNVISNFSELEILAGLPSLQNLWLEGNPLCCSRWYREQVFSFFLHPDKLTLDEKKISTREFWKSQIIIASRQKRPASFGFYSPAKGGTELEGPINTKRKKHSRLACIESEEHTMHTSSDQESVSCENETQSKEENVISDEEAEIVGLMNKIELLKKERSALWLLEFKDWLNQEPEKFADRSKYDASMLNPDKEQYLKHKTSGRHLGESSRYVSDSFQASGDESSMNMLESDSSFADISSGLNSHQYLDRITEEASKFSTGHTTVNYVPVAERMNLKQGQMKSFSSEGCLPFRAGNYRDPSAVNGDERTDAKISNARNSTIDDIVESNIPSVCPGSPPHYQEDILHRRHNLVEEFLQLSAESYSVASSDSHTSSSEVDFTKFGPVILEGDQSLIEEFSGRSGHE---------DRHYNKGHEISQLTQNCVYLSDSYTKQASGVLKLSELDHSQSWHCKVPHSDYDAEIVHCG-KQVADWLENKNCKRKPKRRLIPLSEDNNIINGKSKPSLNFNGDLDNCINGVEDEQGRKNICGSIQQSIDRKQTFDNAISSSLSSNGVRILSQSHSS-LGAEDLVENYFNSNVADLQVHETCRKYMRCNCIIDQNSRYEETEVAVLLSSEQKLYVLLIDSTNDGSGISLKLMGCHEIDDVREIFVGLGLQILR 917
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AR36 ((Uncharacterized protein {ECO:0000313|EMBL:MPA58455.1}) (Fragment))

HSP 1 Score: 900.968 bits (2327), Expect = 0.000e+0
Identity = 499/855 (58.36%), Postives = 606/855 (70.88%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHM--------LSPCTGGAQPVSCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEFCT--PQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKEPYSSELLQ-------------DMFCNVQQEGDCRKNKNCKRISRRRVVSLVDRDAADDEGVP---LPETLDASRVDVVDITKRL---ISLDSDI---HTCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVAD 815
            M +VTGDRYLESLVKFV+K AG LI+GT+ LKLNPVGLHYVQSRLEAL ELESLL GAPVDYLRAY+SDLGDHRA+EQLRRILRLLTSLKVVSVLPP  RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRHVFASRIAEIK+SPQWNRL+ VSCACNGL+LMDESLQLLPVVETLDLSRNKFT+VDNLRKC  LKHLDLGFNHLRTIAS +E+SC++VKLVLRNNALTTL GIENL SLEGLDLSYNI+SNFSELEIL+GL+ LKSLWLEGNPLCCARWYRAQVFSFFP P +++LD+K++   EFWKRQI+IA RH RPASFGFY   KD+A  E  I+TK KK+SRLA IESEEQ   +CSD ESV C+NEI  K +N++ DE+ EIV L+NRIE+MK+ERS LWL+E KEW+N   +  ++  +YSG +++P++    +  ++++ LG+SS+YV+DS H S  +SS   LE D  F+         QY+D + + ++     H D   +P VE  N    H+        LS     + P S        +  + +V  L  ID+IMES S + CL SPP Y+EDILHRR NLEEE  Q+SAESYS AS+DSNTS S+DD  EF +  PQVD S I+E  +KS+D     +S   +  Y K++   + T NG       A Q SG  +  EP  S  LQ             ++   V+QE D  + K CKR +++RV+SL++    + +  P   L   LD  R    +  K++   I     I   +TC++A  TS +   G ILS TKS  L  DDFI N+FNSNVA+
Sbjct:    1 MAVVTGDRYLESLVKFVEKQAGPLIEGTLVLKLNPVGLHYVQSRLEALKELESLLTGAPVDYLRAYVSDLGDHRAIEQLRRILRLLTSLKVVSVLPPPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHVFASRIAEIKNSPQWNRLSFVSCACNGLVLMDESLQLLPVVETLDLSRNKFTKVDNLRKCTKLKHLDLGFNHLRTIASFSEVSCQIVKLVLRNNALTTLHGIENLKSLEGLDLSYNIISNFSELEILAGLSSLKSLWLEGNPLCCARWYRAQVFSFFPHPDKLKLDEKQICTREFWKRQIVIASRHKRPASFGFYSPVKDDAEFEGTIDTKRKKLSRLALIESEEQRTYICSDQESVSCDNEIQSKEENAISDEEGEIVGLMNRIEVMKKERSVLWLQEFKEWMNQASEDFLNSNKYSGTILNPNKEIFLKDKTKHKHLGESSRYVSDSVHASGDESSTNILESDNSFADMAIGSNAHQYFDRVGEAASKFVTGHTDANSVPVVERMNHEQEHLKSYSNEEVLSKKARNSNPESFAALGGYRIDARNSVISLTVIDDIMESHSPSVCLGSPPRYEEDILHRRHNLEEEFLQLSAESYSVASSDSNTSYSEDDCTEFGSLIPQVDWSLIEEFSEKSMDRHSSVLSE--DTYYDKKHGGSEVTQNG-----LCAEQNSGTLKLVEPDRS--LQSWGNDFPAGGGDGEIAHFVKQEADWLEKKKCKRKTKKRVISLLEEFNMNGKTEPSQRLNGDLDICRYVKDEQGKQVYHGIDFQKSIDEKNTCKSAIATSLTN-GGRILSRTKSSSLAIDDFIENYFNSNVAE 845
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P314 ((Serine/threonine-protein kinase 11-interacting protein {ECO:0000313|EMBL:PSR84675.1}))

HSP 1 Score: 900.582 bits (2326), Expect = 0.000e+0
Identity = 512/929 (55.11%), Postives = 631/929 (67.92%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNS-LDEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHMLSPCTGGAQPV-------SCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEFCTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKE-----------PYSSELLQDMFCNVQQEGDCRKNKNCKRISRRRVVSLVDR----DAADDEGVPLPETLDASRVDVVDITKRLISLDSDIH------TCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRY+ESLVKFVDK AG LI+GT+ LKLNPVGLHY QSRLEALSEL+ LL    VDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLP   RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRHVFASRIAEIKDSPQWNRL+ VSC CNGL+LMDESLQLLPVVETLDLSRNKFT+VDN+RKC  LKHLDLGFNHLRTI+S +E+SC++VKLVLRNNALTTLRGIENL SLEGLDLSYN++SNFSELEIL+G+  L++LWLEGNPLCCARWYR QVFSFF  P +++LD+K++S  EFWK QIIIA R  RPASFGFY  AK    L+  INTK KK SRLA IE EE +    SD ESV CENE   K +N  LDE+ EIV L+ +IEL+K+ERS+ WL+E K+W++ +P++  D ++Y  ++++PD     +++ R+  LG+SS+ V+DS   S  +SS   LE D  F+        RQY D I+  ++  S  H+ V  +P VE  N     M S    G  P        S  +   + +  K        ID+I+ES + + C  SPPHYQEDILHRRQNL EE  Q+SAESYS AS+DS+TS S+DD  +F    ++        D+S+ E     S   +  YKK ++V + T NG +L DS  +Q SG+ +  E           P S +  + + C  +Q  D  +NKNCKR  +RR++ L +     +   +  +     LD     V D  +R I   S  H      T +NA  +S S     ILS + S  L ++D   N+FNSNVAD  V ETCR+Y+RC+  I  N   +E E+ V  SSEQKLY+LLI    DGS  +L LIGCH I+DV+E+ VGLGL ++R
Sbjct:    1 MAVVTGDRYIESLVKFVDKQAGQLIEGTLVLKLNPVGLHYAQSRLEALSELDGLL---AVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPSPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHVFASRIAEIKDSPQWNRLSFVSCVCNGLVLMDESLQLLPVVETLDLSRNKFTKVDNIRKCTKLKHLDLGFNHLRTISSFSEVSCQIVKLVLRNNALTTLRGIENLTSLEGLDLSYNVISNFSELEILAGVPSLQNLWLEGNPLCCARWYREQVFSFFLHPDKLKLDEKKISTREFWKSQIIIASRQKRPASFGFYSPAKGGTELKGTINTKRKKHSRLACIEGEEHTMHTSSDQESVSCENETQSKEENVILDEEAEIVGLMEKIELLKKERSAQWLQEFKDWLDQEPENFADRSKYDASILNPDNEQYLKTSGRH--LGESSRCVSDSFQASGDESSTNILESDSSFADISSGLNSRQYLDRITQAASKFSTGHITVNAVPAVEKMNLKQGQMKSFSNEGCLPFRARNYLDSSAINGGERMDAKIGNARNNTIDDIVESNTPSVCPGSPPHYQEDILHRRQNLVEEFLQLSAESYSVASSDSHTSSSEDDFTKFGPLILEG-------DQSLIEEFSESSSHEDRHYKKGHEVSQLTQNGVYLSDSYTKQASGVLKLSELDHSQSWHCQVPSSDDDTEIVHCG-KQVADWSENKNCKRKPKRRLIPLSEDNRIINGKIEPSLNFNGDLDNCMNSVEDELERKILCGSIQHSIDEKQTLDNAISSSLSSNGVKILSRSHSS-LSAEDLFKNYFNSNVADLQVHETCRKYMRCNCIIDQNSRHEEIEVAVFLSSEQKLYVLLIDGTNDGSGISLKLIGCHDIDDVREISVGLGLQLLR 915
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DCF7 ((Outer arm dynein light chain 1 protein {ECO:0000313|EMBL:GFS32316.1}))

HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0
Identity = 510/931 (54.78%), Postives = 631/931 (67.78%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNS-LDEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHMLSPCTGGAQPVSC-------VVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEFCTPQV---DASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKE-----------PYSSELLQDMFCNVQQEGDCRKNKNCKRISRRRVVSLVDR----DAADDEGVPLPETLDASRVDVVDITKRLISLDSDIH------TCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIV 892
            M +VTGDRY+ESLVKFVDK AG LI+GT+ LKLNPVGLHY QSRLEALSEL+ LL    VDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLP   RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRHVFASRIAEIKDSPQWNRL+ VSC CNGL+LMDESLQLLPVVETLDLSRNKF +VDN+RKC  LKHLDLGFNHLRTI+S +E+SC++VKLVLRNNALTTLRGIENL SLEGLDLSYN++SNFSELEIL+G+  L++LWLEGNPLCCARWYR QVFSFF  P +++LD+K++S  EFWK QIIIA R  RPASFGFY  AK    L+  INTK KK SRLA IE EE +    SD ESV CENE   K +N  LDE+ EIV L+ +IEL+K+ERS+ WL+E K+W++ +P++  D ++Y  ++++PD     +  +  + LG+SS+YV+DS   S  +SS   LE D  F+        RQY D I++ ++T S   + V  +P VE  N     M S    G  P           +   + +  K        ID+I+ES + + C  SPPHYQEDILHRRQNL EE  Q+SAESYS AS+DS+TS S+DD  +F  P +   D S I+E  ++S  E         +  Y K ++V + T NG +L DS  +Q SG+ +  E           P S +  + + C  +Q  D  +NKNCKR  +RR++ L +     +   +  +     LD     + D  +R I   S  H      T +NA  +S S     ILS++ S   G++D   N+FNSNVAD  V ETCR+Y+RC+  I  N   +E E+ V  SSEQKLY+LLI    DGS  +L LIGCH I+DV+E+ VGLGL ++
Sbjct:    1 MAVVTGDRYIESLVKFVDKQAGQLIEGTLVLKLNPVGLHYAQSRLEALSELDGLL---AVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPSPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHVFASRIAEIKDSPQWNRLSFVSCVCNGLVLMDESLQLLPVVETLDLSRNKFAKVDNIRKCTKLKHLDLGFNHLRTISSFSEVSCQIVKLVLRNNALTTLRGIENLTSLEGLDLSYNVISNFSELEILAGVPSLQNLWLEGNPLCCARWYREQVFSFFLHPDKLKLDEKKISTREFWKSQIIIASRQKRPASFGFYSPAKVGTELKGTINTKRKKHSRLACIEGEEHTMHTSSDQESVSCENETQSKEENVILDEEAEIVGLMEKIELLKKERSARWLQEFKDWLDQEPENFADRSKYDASILNPDNEQYLKHKTSARHLGESSRYVSDSFQASGDESSTNILESDSSFADISSGLNSRQYLDRITEAASTFSTVLITVNAVPAVEKMNLKQGQMKSFSNEGCLPFRARNYLDPSAINGGERMDAKIGNARNNTIDDIVESNTPSVCPGSPPHYQEDILHRRQNLVEEFLQLSAESYSVASSDSHTSSSEDDFTKF-GPLILEGDQSLIEEFSERSSHE---------DRHYNKGHEVSQLTQNGVYLSDSYTKQASGVLKLSELDHSQSWHCQVPSSDDDTEIVHCG-KQVADWSENKNCKRKPKRRLIPLSEDNRIINGRIEPSLNFNGDLDNCMNSMEDEQERKILCGSIQHSIDKKQTLDNAISSSLSSNGVKILSQSHSSP-GAEDLFKNYFNSNVADLQVHETCRKYMRCNCIIDQNSRHEEIEVAVFLSSEQKLYVLLIDGTNDGSGISLKLIGCHDIDDVREISVGLGLQLL 916
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AQ03 ((Uncharacterized protein {ECO:0000313|EMBL:MPA58454.1}) (Fragment))

HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0
Identity = 498/853 (58.38%), Postives = 604/853 (70.81%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHM--------LSPCTGGAQPVSCVVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEFCT--PQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKEPYSSELLQ-------------DMFCNVQQEGDCRKNKNCKRISRRRVVSLVDRDAADDEGVP---LPETLDASRVDVVDITKRL---ISLDSDI---HTCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNV 813
            M +VTGDRYLESLVKFV+K AG LI+GT+ LKLNPVGLHYVQSRLEAL ELESLL GAPVDYLRAY+SDLGDHRA+EQLRRILRLLTSLKVVSVLPP  RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRHVFASRIAEIK+SPQWNRL+ VSCACNGL+LMDESLQLLPVVETLDLSRNKFT+VDNLRKC  LKHLDLGFNHLRTIAS +E+SC++VKLVLRNNALTTL GIENL SLEGLDLSYNI+SNFSELEIL+GL+ LKSLWLEGNPLCCARWYRAQVFSFFP P +++LD+K++   EFWKRQI+IA RH RPASFGFY   KD+A  E  I+TK KK+SRLA IESEEQ   +CSD ESV C+NEI  K +N++ DE+ EIV L+NRIE+MK+ERS LWL+E KEW+N   +  ++  +YSG +++P++    +  ++++ LG+SS+YV+DS H S  +SS   LE D  F+         QY+D + + ++     H D   +P VE  N    H+        LS     + P S        +  + +V  L  ID+IMES S + CL SPP Y+EDILHRR NLEEE  Q+SAESYS AS+DSNTS S+DD  EF +  PQVD S I+E  +KS+D     +  S +  Y K++   + T NG       A Q SG  +  EP  S  LQ             ++   V+QE D  + K CKR +++RV+SL++    + +  P   L   LD  R    +  K++   I     I   +TC++A  TS +   G ILS TKS  L  DDFI N+FNSNV
Sbjct:    1 MAVVTGDRYLESLVKFVEKQAGPLIEGTLVLKLNPVGLHYVQSRLEALKELESLLTGAPVDYLRAYVSDLGDHRAIEQLRRILRLLTSLKVVSVLPPPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHVFASRIAEIKNSPQWNRLSFVSCACNGLVLMDESLQLLPVVETLDLSRNKFTKVDNLRKCTKLKHLDLGFNHLRTIASFSEVSCQIVKLVLRNNALTTLHGIENLKSLEGLDLSYNIISNFSELEILAGLSSLKSLWLEGNPLCCARWYRAQVFSFFPHPDKLKLDEKQICTREFWKRQIVIASRHKRPASFGFYSPVKDDAEFEGTIDTKRKKLSRLALIESEEQRTYICSDQESVSCDNEIQSKEENAISDEEGEIVGLMNRIEVMKKERSVLWLQEFKEWMNQASEDFLNSNKYSGTILNPNKEIFLKDKTKHKHLGESSRYVSDSVHASGDESSTNILESDNSFADMAIGSNAHQYFDRVGEAASKFVTGHTDANSVPVVERMNHEQEHLKSYSNEEVLSKKARNSNPESFAALGGYRIDARNSVISLTVIDDIMESHSPSVCLGSPPRYEEDILHRRHNLEEEFLQLSAESYSVASSDSNTSYSEDDCTEFGSLIPQVDWSLIEEFSEKSMDRHSSVL--SEDTYYDKKHGGSEVTQNG-----LCAEQNSGTLKLVEPDRS--LQSWGNDFPAGGGDGEIAHFVKQEADWLEKKKCKRKTKKRVISLLEEFNMNGKTEPSQRLNGDLDICRYVKDEQGKQVYHGIDFQKSIDEKNTCKSAIATSLTN-GGRILSRTKSSSLAIDDFIENYFNSNV 843
[Close]
BLAST of XM_017386115.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GNL7 ((Outer arm dynein light chain 1 protein {ECO:0000313|EMBL:GFZ12304.1}))

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 508/933 (54.45%), Postives = 629/933 (67.42%), Query Frame = 0
 
Query:    1 MPLVTGDRYLESLVKFVDKLAGNLIDGTVTLKLNPVGLHYVQSRLEALSELESLLHGAPVDYLRAYISDLGDHRALEQLRRILRLLTSLKVVSVLPPNIRDPTRLSLLPFERLKVLELRGCDLTTSAARGLLELRHTLEKFVCHNSTDALRHVFASRIAEIKDSPQWNRLNSVSCACNGLLLMDESLQLLPVVETLDLSRNKFTRVDNLRKCINLKHLDLGFNHLRTIASLNELSCRVVKLVLRNNALTTLRGIENLLSLEGLDLSYNILSNFSELEILSGLTHLKSLWLEGNPLCCARWYRAQVFSFFPGPYEMQLDDKRMSREEFWKRQIIIARRHSRPASFGFYFKAKDNAGLEVPINTKPKKISRLANIESEEQSPSVCSDLESVECENEIPGKVDNSL-DEKDEIVDLINRIELMKRERSSLWLEELKEWINHDPKSSIDGAQYSGNVVDPDQINCPESNSRYQQLGKSSKYVADSAHVSSIDSSVYALECDPGFS-------GRQYYDPISDVSTTLSMRHVDVEGIPFVEGSNSSPRHMLSPCTGGAQPVSC-------VVQENDGVTMKRTVRPLAAIDEIMESQSSTACLSSPPHYQEDILHRRQNLEEELFQISAESYSTASTDSNTSDSDDDSAEF--CTPQVDASFIDEPLDKSVDEFDFTVSYSGEPSYKKRYDVPKPTHNGNHLLDSDARQISGITEDKEPYSSELLQDMFCNV-------------QQEGDCRKNKNCKRISRRRVVSLV-DRDAADDEGVP---LPETLDASRVDVVDITKR---LISLDSDI---HTCENAGLTSHSEPSGNILSETKSGYLGSDDFIVNHFNSNVADSLVQETCRQYVRCSSFIGTNGDCKECELVVLRSSEQKLYMLLISNEYDGSETTLSLIGCHKIEDVKEVLVGLGLHIVR 893
            M +VTGDRY+ESLVKFV+K  G LI+GT+ LKLNPVGLHY QSRLEALSEL+ LL    VDYLRAY+SDLGDHR LEQLRRILRLLTSLKVVSVLP   RDPT LSLLPF RLKVLELRGCDL+TSAARGLLELRHTLEK +CHNSTDALRH+FASRIAEIKDSPQWNRL+ VSCACNGL+LMDESLQLLPVVETLDLSRNKF +VDN+RKC  LKHLDLGFNHLRTI+S +E+S R+VKLVLRNNALTTLRG+ENL SLEGLDLSYN++SNFSELEIL+GL  L++LWLEGNPLCCARWYR QVFSFF  P +++LD+K++S  EFWK QIIIA R  RPASFGFY  AK    LE  INTK KK SRLA IESEE +    SD ESV CENE   K +N + DE+ EIV L+N+IEL+K+ERS+LWL E K+W+N +P+   D ++Y  ++++PD+    +  +  + LG+SS+YV+DS   S  +SS+  LE D  F+         QY D I++ ++  S  H  V  +P  E  N     M S    G  P           V  ++    K +    + ID+I+ES + + C  SPPHYQEDILHRR NL EE  Q+SAESYS AS+DS+TS S+ D  +F     + D S I+E   +S  E         +  Y K +++ + T N  +L DS  +Q SG+ +  E   S   Q   C V             +Q  D  ++KNCKR  +RR++ L  D +  + +  P       LD     V D   R     S+   I    T +NA  +S S     ILS++ +  LG++D + N+FNSNVAD  V ETCR+Y+RC+  I  N   +E E+ VL SSEQKLY+LLI +  DGS  +L L+GCH+I DV+E+ VGLGL I+R
Sbjct:  202 MAVVTGDRYIESLVKFVEKQTGQLIEGTLVLKLNPVGLHYAQSRLEALSELDGLL---AVDYLRAYVSDLGDHRTLEQLRRILRLLTSLKVVSVLPSPARDPTPLSLLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHIFASRIAEIKDSPQWNRLSFVSCACNGLILMDESLQLLPVVETLDLSRNKFAKVDNIRKCTRLKHLDLGFNHLRTISSFSEVSGRIVKLVLRNNALTTLRGVENLKSLEGLDLSYNVISNFSELEILAGLPSLQNLWLEGNPLCCARWYREQVFSFFLHPDKLKLDEKKISTREFWKSQIIIASRQKRPASFGFYSPAKGGTELEGTINTKRKKHSRLAFIESEEHTMHASSDQESVSCENETQSKEENVISDEEAEIVGLMNKIELLKKERSALWLLEFKDWLNQEPEKFADRSKYDASMLNPDKEQYLKHKTSGRHLGESSRYVSDSFQASGDESSMNMLESDSSFADISSGLNSHQYLDRITEEASKFSTGHTTVNYVPVAERVNLKQGQMKSLSNEGCLPFRAGNYRDPSAVNGDERTGAKISNARNSTIDDIVESNTPSVCPGSPPHYQEDILHRRHNLVEEFLQLSAESYSVASSDSHTSSSEVDFTKFGPVILEGDQSLIEEFSGRSGHE---------DRHYNKGHEISQLTQNCVYLSDSYTKQTSGVLKLSELDHS---QSWHCKVPCSDYDAEIVHCGKQLADWLESKNCKRKPKRRLIPLSEDNNIINGKSKPSLNFNGDLDNCINGVEDEQGRKNICGSIQQSIDRKQTFDNAISSSLSSNGVRILSQSHAS-LGAEDLVENYFNSNVADLQVHETCRKYMRCNCIIDQNSRYEETEVAVLLSSEQKLYVLLIDSTNDGSGISLKLMGCHEIYDVREIFVGLGLQILR 1118
Match NameStatsDescription
A0A5J5BDX5E-Value: 0.000e+0, PID: 57.34(Uncharacterized protein {ECO:0000313|EMBL:KAA8541... [more]
A0A7J7HYG8E-Value: 0.000e+0, PID: 55.20(Uncharacterized protein {ECO:0000313|EMBL:KAF5957... [more]
A0A834GAF4E-Value: 0.000e+0, PID: 54.83(Uncharacterized protein {ECO:0000313|EMBL:KAF7125... [more]
A0A4S4E0W0E-Value: 0.000e+0, PID: 54.17(Uncharacterized protein {ECO:0000313|EMBL:THG0884... [more]
A0A2R6PTW3E-Value: 0.000e+0, PID: 54.78(Serine/threonine-protein kinase 11-interacting pr... [more]
A0A5B7AR36E-Value: 0.000e+0, PID: 58.36(Uncharacterized protein {ECO:0000313|EMBL:MPA5845... [more]
A0A2R6P314E-Value: 0.000e+0, PID: 55.11(Serine/threonine-protein kinase 11-interacting pr... [more]
A0A7J0DCF7E-Value: 0.000e+0, PID: 54.78(Outer arm dynein light chain 1 protein {ECO:00003... [more]
A0A5B7AQ03E-Value: 0.000e+0, PID: 58.38(Uncharacterized protein {ECO:0000313|EMBL:MPA5845... [more]
A0A7J0GNL7E-Value: 0.000e+0, PID: 54.45(Outer arm dynein light chain 1 protein {ECO:00003... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.