Resource Type:
Polypeptide
Name:
XM_017384698.1
Identifier:
XM_017384698.1-protein
Sequence:
MTATLRRSKPAKKSPATKNAPPPLHHSIQITQPTHPPRAHAKNQRAALNR
PSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITH
REDTILHIVSSTKHTHFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTDK
MVDVLLKRNKELLKIRRGGSLPLMRAVWSGNKDVVEYVYSKTDIAGENWG
LRDKERMLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAA
LDQNIPPFIRKLVNTRVEIVRYIWGEIVKQKHDDILKIITAGGSKKKKAE
GFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVY
KLLYELGAKKMRTLDKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLW
FKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCM
VVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCAS
SASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASF
FILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRS
NKRMI
Sequence Length:
605
Sequence Checksum:
79c29afd9a7349ca3f58bf2e358a55e3
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017384698.1, derives from mRNA, XM_017384698.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1QDQ4 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PWA96112.1}))
HSP 1 Score: 467.233 bits (1201), Expect = 2.902e-155
Identity = 262/597 (43.89%), Postives = 366/597 (61.31%), Query Frame = 0
Match: A0A2U1QDQ4 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PWA96112.1}))
HSP 1 Score: 467.233 bits (1201), Expect = 2.902e-155
Identity = 262/597 (43.89%), Postives = 366/597 (61.31%), Query Frame = 0
Query: 44 QRAA-LNRPSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHTHFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRGGSL-PLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVNT----------------------------RVEIVRYIWGEIVKQKHDDILKIITAGGSKKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGA-KKMRTLDKD--GNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRMI 605
QRA LN P L++ ++DY+ ICVPL A++ GDW AA IL + E+V SIT +T LHI +S + F + LV M+ EDL+L NK G TAL +A ++ + +M ++++ +NK LL I + PL A GN+ VEY+Y ++ +A + W +++ ++ CI LFDI I+ KD + VL LA KP A + P I + +N+ +VEI + + G I D+ +IT G K+ + LF+AA +GN KF++EL+R +P++ W DNN +IFH+AV R E++Y LLYE+G+ K M T+ +D GNN+LHL + ++RL +VSG QMQREL+WF+EV + R + N G+TP+ LFTE H D+V KGE WMK TA QCMVVA LIATI+F AF++PGG N ++G P+F +K IFI FV++DA SL S+ASILMFL+ILT+RY E DFL SLP KLM G +TLF+SI TMM+AFS SFF+LY L W+PI++ AA PVI +A LQY LL+DV +S SR++F+ KRM+
Sbjct: 58 QRAPKLNLPCGDLLAN--RKDYINICVPLYDASINGDWEAASLILTERKELVRYSITENRETALHIAASAHNIKFVEALVGLMEKEDLELQNKSGNTALCLAAAAGNTRMAEIMVNKNKSLLTIPGSNEMMPLYMAALFGNRGTVEYLYDNSNKMADDGWNQQNRGWVVLKCIEADLFDITLKIL----KDRPELAQAEGVLGVLARKPYAFNDKEPHLIWRFINSILGVHVKEKETEAMQLLKIIWKNIMLMPKVEIDKLLRGPIDPPIKDEKGNVITKDG-KRTYSSRVLFVAAEMGNTKFVVELIRQYPDLIWKV-NDNNQSIFHIAVSCRHESIYNLLYEIGSMKDMITVLRDPKGNNLLHLVGKRAEKTRLEDVSGVTFQMQRELIWFEEVEAMIPPSYRERKNAAGQTPRELFTESHKDLVSKGEDWMKGTANQCMVVAALIATIVFGVAFSIPGGYNQNSGFPMFVRKEIFIAFVISDAISLIFSAASILMFLSILTSRYAEQDFLESLPQKLMIGLATLFLSIMTMMIAFSFSFFVLYHNKLIWVPIVICVVAAVPVILYAKLQYPLLVDVYRSIYSSRYIFKPKKRML 646
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4V6RY04 ((Uncharacterized protein {ECO:0000313|EMBL:THF95046.1}))
HSP 1 Score: 463.766 bits (1192), Expect = 1.726e-154
Identity = 262/593 (44.18%), Postives = 361/593 (60.88%), Query Frame = 0
Match: A0A4V6RY04 ((Uncharacterized protein {ECO:0000313|EMBL:THF95046.1}))
HSP 1 Score: 463.766 bits (1192), Expect = 1.726e-154
Identity = 262/593 (44.18%), Postives = 361/593 (60.88%), Query Frame = 0
Query: 51 PSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHTHFAKKLVNKMQVEDLKLLNKEGLTALLIAVSS-TDKMVDVLLKRNKELLKIRRG-GSLPLMRAVWSGNKDVVEYVYSKTDIAGENWGLRDKERMLDYCIAVGLFDIAFNIIN-----ICKKDGTLMVIGAEVLRYLACKPAALDQ------------NIPPF---IRKLVNTR-------------VEIVRYIWGEIVKQKHDDILKIITAGGSKKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGA-KKMRTL--DKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRMI 605
PS LS E ++ Y+ IC+PL AAL+GDW AA ++ +P V+ SIT +T LHI ++ K HF ++LV M EDL+L N G TAL A ++ T ++ +V++ +N+ L IR G PL A G+ D+V Y+Y KT E+ D+ +L+ C++ L+D+A +I+ +DG G L LA KP+A N P K+ + R E+VR +W ++KQ +I +I + LF+AA GN KF+IEL+ +P++ W N +IFHVAV++R ++ +LYE+G+ K + T D+D NN+LHLAA P ++LN VSGAALQMQREL+WFKEV + + N +GKTPQ LFTE+H ++VEKGE WMK+TA+Q MVVATLIAT+MFAAAFT+PGGN+ + G P+FRK + F++F ++DA +L SS SILMFL+ILT+RY ENDFL SLP+KLM G + LF+SI TMMVAF A+FFI++ W+PI VA FA P+I FA LQY LL DVI S SR LF+ K M+
Sbjct: 28 PSCDLLSREARDQYLAICLPLYQAALKGDWKAANGVIEIFPTVIRSSITKGWETALHIAAAAKRIHFVEELVGLMNPEDLELQNSNGNTALCFAAAAGTVRIAEVMINKNERLPMIRGSHGMTPLYMAALLGHSDMVWYLYQKTK--SEDLSDEDRIGILNTCVSTDLYDVALDILKHHPQLAVARDGN----GETALHVLARKPSAFTSGSQLWNLHLKPSNTGPIDWGCSKICSNRKVGHDKSLKQAQAFELVRLLWKMMIKQDDSEISDLI-------RSPSRLLFVAAEHGNTKFLIELIEAYPDLIWKV-NSQNQSIFHVAVLHRHAGIFNILYEIGSIKDLITAYRDEDRNNMLHLAAKIAPPNQLNIVSGAALQMQRELVWFKEVEKIMQPSYVEKKNSKGKTPQALFTEEHKNLVEKGEAWMKNTASQSMVVATLIATVMFAAAFTVPGGNDNNTGIPMFRKDSSFMVFAISDAIALVTSSTSILMFLSILTSRYAENDFLESLPFKLMIGLTALFVSITTMMVAFGATFFIVFDRYAVWVPIAVALFACVPIILFATLQYPLLADVIHSTYGSRLLFQPRKHML 606
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103XBI3 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:KVH87673.1}))
HSP 1 Score: 460.685 bits (1184), Expect = 5.257e-153
Identity = 260/582 (44.67%), Postives = 367/582 (63.06%), Query Frame = 0
Match: A0A103XBI3 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:KVH87673.1}))
HSP 1 Score: 460.685 bits (1184), Expect = 5.257e-153
Identity = 260/582 (44.67%), Postives = 367/582 (63.06%), Query Frame = 0
Query: 56 LSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHT----HFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRGGSL-PLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNIIN----ICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVNTR--------VEIVRYIWGEIV---KQKHDDILK-----IITAGGSKKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKKMRTL-----DKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRMI 605
L + +EDY+KI VPL A+++G W AA+ IL + PE++ +IT +T LHI +S + T F + LVN M DL+L NK TAL +A ++ + K +++K+N+ +L I + PL A D+V+Y+Y + ++G+ W ++ +L C+ +FD+A NI++ + K LM E+L LA K A + P F+ +++ + ++++R IW +I K + DDI++ + GG K LF+AA++GN +FI+EL+R +P+I W D TIFH+AV R +Y LLYE+G+ M+ L DK NN+LHL A R NVSG ALQMQRELLWFKEV + R++ NK+G+ P LFT++H +V +GE WMK+TA+QCMVVATLI+TI+FAAAFTLPGG N + G P FR+K I+FV++DA SL SS S+LMFL+ILT+RY E DFL SLP KLM G +TLF+SI TMMVAFSASFF+LY ++LKW+PI+VA AA PVI FA+LQ+RLL DV S SR+LF+ KR++
Sbjct: 45 LIEGSREDYIKIGVPLYEASIKGHWKAAKAILDQKPELIRFAITENYETPLHIAASAESTKCVEEFVENLVNLMDKNDLELQNKTCNTALSLAAAAGNVKTAKIMVKKNRAVLDIPGSNRMMPLYMAALFAKSDMVKYLYENSKKMSGDYWTPENRGWVLQKCVEADIFDVALNIVSDLPELTAKKRLLM----EILSVLAQKTRAFKRIKPNFMSRIIKSSHVEKESDALQLLRVIWQKIAIMPKNEIDDIIRGPPGEVRVPGGRIKGYPSRVLFLAAKMGNTRFILELIRSYPDIIWKV-DDKGQTIFHIAVKRRHAKIYNLLYEIGS--MKDLITPLKDKKDNNMLHLVAKSAKPKRFQNVSGVALQMQRELLWFKEVEQMIPPNYRQRKNKDGEIPHDLFTKKHERLVAQGEEWMKNTASQCMVVATLISTIVFAAAFTLPGGYNQNTGVPFFRQKPALIVFVISDAISLIFSSTSVLMFLSILTSRYAERDFLESLPKKLMFGLATLFLSIFTMMVAFSASFFVLYTKNLKWVPIIVAGLAAMPVILFAILQFRLLGDVFYSTYRSRYLFKPKKRVL 619
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7LBX1 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4079732.1}))
HSP 1 Score: 457.218 bits (1175), Expect = 8.200e-152
Identity = 251/578 (43.43%), Postives = 357/578 (61.76%), Query Frame = 0
Match: A0A6S7LBX1 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4079732.1}))
HSP 1 Score: 457.218 bits (1175), Expect = 8.200e-152
Identity = 251/578 (43.43%), Postives = 357/578 (61.76%), Query Frame = 0
Query: 51 PSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHTHFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRG-GSLPLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAAL----DQNIPPFIRKLVNTRV----------EIVRYIWGEIVKQKHDDILKIITAGGS----KKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKK---MRTLDKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRM 604
PS +LSD+R+ D+ +ICV L A+++GDW AE I++ PE++ SIT R +T LH+ + + T F LVN M+VE L L K G TAL +A ++ + KM +++ +NK LL IR G +PL A + GN D+V Y+Y K++ + G W K+ +L C+ LFD A I+ ++ + + +L LA KP A NI I+ + +V +++R IW +V++ ++ I+ G+ + + LF+AA +GN F++EL+ +P++ W +N +IFH+AV +R E +YKLLYE+G+ K R D D NN+LHL ++RL +VSG A QMQREL WFKEV + + R++ N +G TP LFT+ H D+V KGE WMK TA+QCMVVA LIATI+FA AFT+PGG N +G P+FRK +FI FV+ DA SL SS SIL+FL+ILT+RY + DFL SLP KL+ G TLF+SI TMMVAFS SFF+LY E L + I ++ FA P+IS+A L Y LL+D S + SRHLF+ +R+
Sbjct: 31 PSPEFLSDDRRIDFNEICVRLCKASIKGDWKTAEIIIQLTPELLYSSITERCETALHVAALGESTTFVNNLVNMMEVEHLLLQTKTGDTALCLAAAAGNVKMAKIMVAKNKNLLTIRGSEGLVPLCVAAFYGNADMVRYLYKKSNRMEGSEWKASTKQWLLLKCVEFDLFDAALKIL----ENHSDLAQNGTILGVLAQKPYAFYEPQTHNIWRIIKSSICLKVGADVGESQALQVLRMIWTRVVERPKSEVDNILRGPGTVINGRVTYSSHILFVAAEMGNTDFVLELISKYPDLIWK-KNENKQSIFHIAVSHRNEGIYKLLYEIGSMKDIITRLTDTDRNNMLHLVGKNRVKNRLEDVSGVAFQMQRELQWFKEVESMIPPFYRKEKNNDGLTPLELFTKSHKDLVSKGEKWMKGTASQCMVVAALIATIVFAVAFTIPGGYNQSDGFPMFRKNGVFIAFVIVDAISLILSSTSILVFLSILTSRYAQQDFLKSLPKKLLIGLGTLFLSIMTMMVAFSISFFLLYEEKLITVAIPISVFAFIPIISYATLHYHLLMDSFHSTISSRHLFKPQRRL 603
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6LF92 ((Uncharacterized protein {ECO:0000313|EMBL:PLY86009.1}))
HSP 1 Score: 455.292 bits (1170), Expect = 3.930e-151
Identity = 250/577 (43.33%), Postives = 356/577 (61.70%), Query Frame = 0
Match: A0A2J6LF92 ((Uncharacterized protein {ECO:0000313|EMBL:PLY86009.1}))
HSP 1 Score: 455.292 bits (1170), Expect = 3.930e-151
Identity = 250/577 (43.33%), Postives = 356/577 (61.70%), Query Frame = 0
Query: 51 PSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHTHFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRG-GSLPLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAAL----DQNIPPFIRKLVNTRV----------EIVRYIWGEIVKQKHDDILKIITAGGS----KKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKK---MRTLDKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKR 603
PS +LSD+R+ D+ +ICV L A+++GDW AE I++ PE++ SIT R +T LH+ + + T F LVN M+VE L L K G TAL +A ++ + KM +++ +NK LL IR G +PL A + GN D+V Y+Y K++ + G W K+ +L C+ LFD A I+ ++ + + +L LA KP A NI ++ + +V +++R IW +V++ ++ I+ G+ + + LF+AA +GN F++EL+ +P++ W +N +IFH+AV +R E +YKLLYE+G+ K R D D NN+LHL ++RL +VSG A QMQREL WFKEV + + R++ N +G TP LFT+ H D+V KGE WMK TA+QCMVVA LIATI+FA AFT+PGG N +G P+FRK +FI FV+ DA SL SS SIL+FL+ILT+RY + DFL SLP KL+ G TLF+SI TMMVAFS SFF+LY E L + I ++ FA P+IS+A L Y LL+D S + SRHLF+ +R
Sbjct: 31 PSPEFLSDDRRIDFNEICVRLCKASIKGDWKTAEIIIQLTPELLYSSITERCETALHVAALGESTTFVNNLVNMMEVEHLLLQTKTGDTALCLAAAAGNVKMAKIMVAKNKNLLTIRGSEGLVPLCVAAFYGNADMVRYLYKKSNRMEGSEWKASTKQWLLLKCVEFDLFDAALKIL----ENHSDLAQNGTILGVLAQKPYAFYEPQTHNIWRIVKSSICLKVGADVGESQAMQVLRKIWTRVVERPKSEVDNILRGPGTVINGRVTYSSHILFVAAEMGNTDFVLELISKYPDLIWK-KNENKQSIFHIAVSHRNEGIYKLLYEIGSMKDIITRFTDTDRNNMLHLVGKNRVKNRLEDVSGVAFQMQRELQWFKEVESMIPPFYRKEKNNDGLTPLELFTKSHKDLVSKGEEWMKGTASQCMVVAALIATIVFAVAFTIPGGYNQSDGFPMFRKNGVFIAFVIVDAISLILSSTSILVFLSILTSRYAQQDFLKSLPKKLLIGLGTLFLSIMTMMVAFSISFFLLYEEKLITVAIPISVFAFIPIISYATLHYHLLMDSFHSTISSRHLFKPQRR 602
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251UR07 ((Putative ankyrin repeat-containing domain, PGG domain protein {ECO:0000313|EMBL:OTG25473.1}))
HSP 1 Score: 456.833 bits (1174), Expect = 2.801e-150
Identity = 255/584 (43.66%), Postives = 357/584 (61.13%), Query Frame = 0
Match: A0A251UR07 ((Putative ankyrin repeat-containing domain, PGG domain protein {ECO:0000313|EMBL:OTG25473.1}))
HSP 1 Score: 456.833 bits (1174), Expect = 2.801e-150
Identity = 255/584 (43.66%), Postives = 357/584 (61.13%), Query Frame = 0
Query: 61 KEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHT----HFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRGG-SLPLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNIIN----ICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVNTRVEI-----------------VRYIWGEIVKQKHDDILKIITAGGSKKKKAEG--------FLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKK---MRTLDKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRMI 605
+E+Y+++ VPL AA++GDW AA+ L K P ++ +IT +T+LH+ +S + T F K LVN M+ +DL+L NK TAL +A ++ + + ++K+N L +I ++PL A D+V ++Y ++ + G+ W ++ +L C+ +FD+A I+N +C K G L+ +VL LA KP A + P + +++N+ E+ +R IW +I K DI II G EG LF+AA+ GN FIIEL+RL+P+I W D TIFH+AV RQ YKLLYE+GA K D+ NN+LH+ A Q+R NVSG A QMQ ELLWF+EV + R + NK+GKTPQ LFT+ HAD+++ G WMK+TA+QCMVVATLIATI+FAAAFTLPGG N + G P FRK+ IIFV+ADA SL SS S+L+FL+ILT+RY E DFL SLP KL+ G +TLF+SI TMM+AFSASFF+LY + ++W+PI + A PVI + LQ+ L DV KSA +R+LF+ NKR++
Sbjct: 137 REEYIEVGVPLYEAAIKGDWKAAKPFLDKQPNLICFAITENYETLLHVAASAESTKAVEEFVKNLVNMMEKKDLELQNKNYNTALHLAAAAGNIETARTMIKKNPALTEIPGNNRTMPLYMAALFAKPDMVRHLYGISNKMGGDYWSTDNRGWVLQKCVEGDIFDVAIQIVNDCPELCAKKGPLLT---DVLLALAQKPKAFKRTKAPAVFRIINSVFELFHVKLWSIEKEREALQLLRIIWRKIAKMSKTDIDDIIRGTGVTHTTKEGTTIKHPSRVLFLAAKKGNTPFIIELIRLYPDIIWK-QDDKKKTIFHLAVKRRQVKTYKLLYEIGAMKDLITPIKDEKDNNMLHMVAKSVKQNRFQNVSGVAFQMQSELLWFQEVEKMIPPNYRERKNKDGKTPQDLFTKTHADLLKDGGEWMKNTASQCMVVATLIATIVFAAAFTLPGGYNDNTGLPFFRKEPCLIIFVIADAVSLICSSTSVLIFLSILTSRYAERDFLESLPRKLVNGIATLFLSIVTMMIAFSASFFVLYDKKVEWVPITITGLAGIPVILYVTLQHGLFRDVFKSAYQTRYLFKRNKRVL 716
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1LXA8 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PWA53656.1}))
HSP 1 Score: 450.284 bits (1157), Expect = 1.069e-148
Identity = 266/631 (42.16%), Postives = 375/631 (59.43%), Query Frame = 0
Match: A0A2U1LXA8 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PWA53656.1}))
HSP 1 Score: 450.284 bits (1157), Expect = 1.069e-148
Identity = 266/631 (42.16%), Postives = 375/631 (59.43%), Query Frame = 0
Query: 19 NAPPPLHHSIQITQP--THPPRAHAKNQRAAL---NRPSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYP--EVVNMSITHREDTILHIVSSTKHTH----FAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRGGS-------LPLMRAVWSGNKDVVEYVYSKTDIAGENWGLRDKER--MLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVN-----------------TRVEIVRYIWGEIVKQKHDDILKIITAGGSKKKKAEG-------FLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKKMRTL-----DKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFR 599
N PL Q QP + +HA + L N P+ L R E Y++I VPL A+++GDW AAE I KY E+V SIT +T LH+ +STK + F + LV M EDL L N TAL +A + + K V ++++N+ L I GGS +PL A GN +VV+Y+Y K++ ++ G + R L+ C+ +FDIA ++ + G A +L +A KP A + +++ +++++ IW +I K+ +I I+ ++++ G LF+AA LGN KF++EL+R +P++ W DNN +IFH+AV +R E +Y LLYE+G+ M+ L D DGNN+LHLAA + RL +VSGAAL+MQRELLWFKEV + + R + NK+G TP+ LFTE+H ++ KGE WMK TA+QCMVVATLIATI+FAAAFT+PGG N +NG P+F +K F++FVVADA SL SSASIL FL+ILT+RY E DF+ SLP KLM G STLF+SI TMM+ F SFF+LY +KWIPI + FA PV+ + +LQY LL+DVI++ +++LF+
Sbjct: 13 NEEKPLSLDQQQQQPEMNNAVDSHASSSLTPLRGPNLPNPTLLRGSR-EVYLEIAVPLYKASVKGDWEAAEDIFEKYQGVELVRYSITENGETPLHVAASTKSSKKVEKFVENLVKLMTKEDLALENTNYNTALYLAATRGNIKTVKTMMEKNESLRAIPGGGSEQKLPTLMPLYPAALFGNYEVVKYLYEKSNDLCDDDGWKPVTRSWFLEKCVEGDMFDIALKVVVKYPELGN----EARILSMMAQKPEAFQEEKSNITERIIKIGFSVIGLKAGPLEKEPKALQLLKIIWNDIAKRPKKEIDDIMRG---QREQINGRMAYPSRILFVAAELGNTKFVVELIRQYPDLIWKV-NDNNQSIFHIAVKHRHEGIYNLLYEIGS--MKDLVTPIKDNDGNNMLHLAAKSTQKKRLEDVSGAALKMQRELLWFKEVESIMPPTYRLKKNKDGLTPRELFTEEHQHLMIKGEEWMKSTASQCMVVATLIATIVFAAAFTVPGGYNQNNGIPMFNRKLTFVVFVVADAISLFLSSASILTFLSILTSRYAERDFVRSLPMKLMLGLSTLFLSITTMMITFGVSFFVLYHNEMKWIPISIGVFAIMPVVLYVVLQYHLLIDVIRATYGAKYLFK 632
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103UY46 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:KVH43966.1}))
HSP 1 Score: 451.825 bits (1161), Expect = 1.072e-148
Identity = 271/664 (40.81%), Postives = 373/664 (56.17%), Query Frame = 0
Match: A0A103UY46 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:KVH43966.1}))
HSP 1 Score: 451.825 bits (1161), Expect = 1.072e-148
Identity = 271/664 (40.81%), Postives = 373/664 (56.17%), Query Frame = 0
Query: 29 QITQPTHPPRAHAKNQR--AALNRPSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHT----HFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRGGSL-PLMRAVWSGNKDVVEYVYSKTDIAGENWGLRDKERMLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVNT-----------------RVEIVRYIWGEIVK-------------------------QKHDDILKIIT--------------------------------AGGSKKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKKMRTL-----DKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRMI 605
+I P P+ + Q A L P +Y+ R E+Y+K+ +PL A++RGDW AA+ IL + E+V SIT +T LH+ +S K T F + LV+ M+ EDL+L N TAL +A ++ + KMV +++K+NK LL I + PL A G+ D+V+Y+Y + + G+ W +++ +L C+ LFDIA I+N C + + VL LA KP A + I + + ++++R IW I K QK D L+++ G +K+K + LF+AA +GN KF++EL+R +P++ W DNN +IFH+AV +R E +Y LLYE+G+ M+ L D + NN+LHL RL +VSG ALQMQRELLWFKEV + R + NKE TP LFT+ H D+V +GE WMK TA+QCMVVATLIATI+F+AAFT+PGG N D+G P F +K F++FVVADA SL +SSAS+LMFL+ILT+RY E DFL SLP KLM G +TLF+SI M VAFS SFF+LY L WIPI++ AA PV+ FA LQY LL DVI S SR+LFR K ++
Sbjct: 24 EINLPVVSPQLNLPRQDLLAVLTLPR-YYVKGPR-ENYIKVGIPLYEASIRGDWKAAKAILDEDKELVRSSITENHETALHVAASAKRTKRVEEFVENLVDMMKDEDLELQNSSYNTALCLAAAAGNVKMVKIMVKKNKNLLTIPGSQKMMPLYMAALFGDHDMVKYLYDNSKLYGDGWTPQNRGWLLLKCVESDLFDIALRILNDCPELASY----GSVLGVLARKPDAFIETKSNIIWGKIRSIFAVVGLKVGVPEKESEALQLLRIIWKTIAKKPKNVIDDIIRGPADSSKQGEKPASQKEDQTLQLLKLISDNIVKMPVEIHNLFNGPAATTSKVTRTPLMGNTKQKHSSRILFVAAEMGNTKFVVELIRQYPDLIWKV-NDNNQSIFHIAVKHRHEGIYNLLYEIGS--MKDLITPLKDHNDNNMLHLVGKSAKTKRLQDVSGVALQMQRELLWFKEVEAMIPPSYRERRNKEDLTPHELFTKDHKDLVSEGEKWMKGTASQCMVVATLIATIVFSAAFTVPGGYNQDDGIPFFYRKITFMVFVVADAISLFSSSASVLMFLSILTSRYAERDFLESLPKKLMLGLTTLFLSITAMTVAFSVSFFVLYHNDLIWIPIVIGLLAAMPVLLFAWLQYPLLADVIHSTYGSRYLFRPKKLIL 678
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1M139 ((Ankyrin repeat-containing domain, PGG domain protein {ECO:0000313|EMBL:PWA54969.1}))
HSP 1 Score: 451.825 bits (1161), Expect = 1.728e-148
Identity = 270/640 (42.19%), Postives = 372/640 (58.13%), Query Frame = 0
Match: A0A2U1M139 ((Ankyrin repeat-containing domain, PGG domain protein {ECO:0000313|EMBL:PWA54969.1}))
HSP 1 Score: 451.825 bits (1161), Expect = 1.728e-148
Identity = 270/640 (42.19%), Postives = 372/640 (58.13%), Query Frame = 0
Query: 51 PSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHTH----FAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRGGSL-PLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNIINICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVN-----------------TRVEIVRYIWGEIVKQ----------------KHDD------------ILKII--------------TAGGS------------KKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGAKKMRTL-----DKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGG-NNGDNGH----PIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNK 602
PSS+ L + +E+Y+++ +PL A+++ DW AA +IL K P+++ SIT +T LH+ +S K T F + LV++M+ EDL+L N TAL +A ++ + +MV++++K+N L+ I + PL A G+ DVV+Y+Y K+ + + W +++ +L C+ LFDIA I+ +D + VL LA KP A FI++ +N ++++R IW I K+ K DD +LK+I TAG S KK + LF+AA +GN KFI+EL+RL+P++ W DNN +IFH+AV +R E +Y LLYE+G+ M+ L D++ NN+LHL + RL +VSG ALQMQRELLWFKEV + R + NK+G TP LFT++H D+V KGE WMK TA+ CMVVA LIATI+FAAAFT+PGG + G G PIF K F++FVVADA SL +SSASILMFL+ILT+RY E DFL SLP KLM G +TLF+SI TM VAFS SFF+LY WIPIL++ FA PV+ FA LQY LL DV +S SR+LFR K
Sbjct: 47 PSSYLLQEGHREEYIELGIPLYEASIKADWGAAIKILDKKPDLIRSSITENGETALHVAASAKRTKRVVVFVQNLVDRMEKEDLELKNNSSNTALCLAAAAGNVEMVEIMVKKNPVLVIIPGSQQMMPLYMAALFGDHDVVKYLYGKSQQLRDDGWNAQNRAWLLQKCVEGDLFDIALQIV----EDRPELASNGSVLGILAKKPDAFSGESSNFIKRTINWVLAFVGPKVGHPKKDTEALQLLRIIWKNIAKKSKKEIDDILRGPVDPVKKDDRLPYGKDDQHLHLLKVIAEHVTKIPAEIQKMTAGPSGKMSRAPSMANTKKTYSSRMLFVAAEMGNTKFIVELIRLYPDLIWKV-NDNNQSIFHIAVKHRNEGIYNLLYEIGS--MKDLITPLRDENDNNMLHLVGKIAKRKRLQDVSGVALQMQRELLWFKEVEAMIPPSYRERKNKDGLTPHELFTKEHKDLVAKGEEWMKGTASHCMVVAALIATIVFAAAFTVPGGYSQGGPGQTLGIPIFHSKATFMVFVVADAISLFSSSASILMFLSILTSRYAERDFLQSLPKKLMLGLTTLFLSITTMTVAFSVSFFVLYDNGFIWIPILISLFAVMPVLLFARLQYPLLEDVRRSTYGSRYLFRPKK 679
BLAST of XM_017384698.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6LFT1 (PGG domain-containing protein {ECO:0000259|Pfam:PF13962})
HSP 1 Score: 448.358 bits (1152), Expect = 6.832e-148
Identity = 257/590 (43.56%), Postives = 353/590 (59.83%), Query Frame = 0
Match: A0A2J6LFT1 (PGG domain-containing protein {ECO:0000259|Pfam:PF13962})
HSP 1 Score: 448.358 bits (1152), Expect = 6.832e-148
Identity = 257/590 (43.56%), Postives = 353/590 (59.83%), Query Frame = 0
Query: 48 LNRPSSFYLSDERKEDYMKICVPLQIAALRGDWHAAERILRKYPEVVNMSITHREDTILHIVSSTKHTHFAKKLVNKMQVEDLKLLNKEGLTALLIAVSSTD-KMVDVLLKRNKELLKIRRG-GSLPLMRAVWSGNKDVVEYVYSKTD-IAGENWGLRDKERMLDYCIAVGLFDIAFNII----NICKKDGTLMVIGAEVLRYLACKPAALDQNIPPFIRKLVNT-------RVEIVRYIW-----------GEIVKQKHDDILK----IITAGGSKKKKAEGFLFIAARLGNYKFIIELLRLFPEIAWHTAGDNNYTIFHVAVINRQENVYKLLYELGA-KKMRTL--DKDGNNILHLAAIKPPQSRLNNVSGAALQMQRELLWFKEVSTRVHVIDRRQLNKEGKTPQVLFTEQHADMVEKGEIWMKHTAAQCMVVATLIATIMFAAAFTLPGGNNGDNGHPIFRKKTIFIIFVVADATSLCASSASILMFLAILTARYTENDFLVSLPWKLMAGFSTLFISIATMMVAFSASFFILYAESLKWIPILVATFAAAPVISFAMLQYRLLLDVIKSALMSRHLFRSNKRMI 605
L+ P LS +EDY+ CVPL A+ GDW AA+ IL K E+V SITH DT LHI ++ +HT F + LV M +DL+L N G TA+ +A S+ + +M+ ++ NK L I G +PL A GN D V Y+Y +D + G+ W R++ +L CI LFDIA I+ + G L+ + + + KP + KL +T ++++VR IW E+++ HD ++K ++ K+ + LF+A +GN F+IEL+ +PE+ W DNN +IFHVAV +RQE +Y LLY++G+ K M T D +GNN+LHL + ++ L NVSG A QMQRELLWFKEV + R + N G TP LFTE H +V KGE W+K TA QCMVVA LIAT++F AF++PGG + D G P+F +K I+I FV++DA SL +SSASILMFL++LT+RY E DFL LP +LM G +TLF+SI TMMVAFS SFF+LY L W+PI +A AA PVI FA LQY LL+D+ S SR++F+ K M+
Sbjct: 59 LSHPCQDLLSG--REDYINTCVPLYQASFNGDWEAAKIILNKRSELVRYSITHNFDTALHIATAAQHTKFVEALVELMDAKDLELQNIHGNTAICLAASAGNVEMIRTMVHWNKRLPTIPGAQGMMPLYMAALVGNHDSVNYLYDDSDKMTGDFWMHRNRVWVLIKCIEADLFDIALKIVVDRPEVAPNVGVLLALAQKRHAFDDMKPNIFQGIVKSIEVKLGDTEARREAMKMKLVRLIWKNIMRMPKKFVDELLRGPHDTMMKNGKAVLVMKDGKRMYSSRILFVAVEMGNTNFVIELISQYPELIWEL-NDNNQSIFHVAVSHRQERIYNLLYDIGSMKDMITPLKDPEGNNMLHLVGKEAEKNLLQNVSGVAFQMQRELLWFKEVEAMILPSLREKRNAAGLTPHELFTENHKQLVSKGEEWIKGTANQCMVVAALIATMVFGVAFSIPGGYHQDTGLPMFIRKEIYIAFVISDAISLFSSSASILMFLSMLTSRYAEQDFLEVLPKQLMIGLATLFLSIMTMMVAFSFSFFVLYHNMLIWVPISIAVVAAIPVILFAKLQYPLLMDIYGSIYGSRYIFKPKKHML 645
| Match Name | Stats | Description |
|---|---|---|
| A0A2U1QDQ4 | E-Value: 2.902e-155, PID: 43.89 | (Ankyrin repeat-containing protein {ECO:0000313|EM... [more] |
| A0A4V6RY04 | E-Value: 1.726e-154, PID: 44.18 | (Uncharacterized protein {ECO:0000313|EMBL:THF9504... [more] |
| A0A103XBI3 | E-Value: 5.257e-153, PID: 44.67 | (Ankyrin repeat-containing protein {ECO:0000313|EM... [more] |
| A0A6S7LBX1 | E-Value: 8.200e-152, PID: 43.43 | (Uncharacterized protein {ECO:0000313|EMBL:CAB4079... [more] |
| A0A2J6LF92 | E-Value: 3.930e-151, PID: 43.33 | (Uncharacterized protein {ECO:0000313|EMBL:PLY8600... [more] |
| A0A251UR07 | E-Value: 2.801e-150, PID: 43.66 | (Putative ankyrin repeat-containing domain, PGG do... [more] |
| A0A2U1LXA8 | E-Value: 1.069e-148, PID: 42.16 | (Ankyrin repeat-containing protein {ECO:0000313|EM... [more] |
| A0A103UY46 | E-Value: 1.072e-148, PID: 40.81 | (Ankyrin repeat-containing protein {ECO:0000313|EM... [more] |
| A0A2U1M139 | E-Value: 1.728e-148, PID: 42.19 | (Ankyrin repeat-containing domain, PGG domain prot... [more] |
| A0A2J6LFT1 | E-Value: 6.832e-148, PID: 43.56 | PGG domain-containing protein {ECO:0000259|Pfam:PF... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |