XM_017388236.1

Resource Type: 
Polypeptide
Name: 
XM_017388236.1
Identifier: 
XM_017388236.1-protein
Sequence: 
MTTLSHCALFFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVMQQRHQ
LSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSNIICWR
FGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRP
GAKFSGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLG
HFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWG
EGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVF
ENVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPVWVPE
PESKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVH
DSGPLDDVEMPPQLTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVL
VRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARG
GVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYE
YMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHR
DIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYF
RLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQD
NIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLE
RALLACFAAPALSHSSTNSSS
Sequence Length: 
771
Sequence Checksum: 
7a30dad2e293b8b77678e66a9d615533
View location in JBrowse: 
DCARv2_Chr4:22198723..22201038-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017388236.1, derives from mRNA, XM_017388236.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IUH1 ((Serinethreonine-protein kinase-like protein ccr4 {ECO:0000313|EMBL:OIT04240.1}))

HSP 1 Score: 796.579 bits (2056), Expect = 0.000e+0
Identity = 426/806 (52.85%), Postives = 538/806 (66.75%), Query Frame = 0
 
Query:    2 TTLSHCALFFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVMQQRHQ------LSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSN----IICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRPGAKF-SGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFE--NVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPV--------------WVPEPESKHGGVN--WTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDVEMPPQLTSPKEAAR-------APVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSSS 771
            T L    +F  F +SF P+S  SL T SIS++   N  +IC+++           L+C +F   ++      I     VSFSG+VGG+G++CGL    S+    ++CWRF      +  KRIY GP++ +L SG   ICG++     LECWQW +F        S  LAVG DFVCGL+  G+IQC G+   V   +  GNYS +A+G  H CAIS    + CWG N+VG+ P G FK LALGD RSC +R++G VVCWGE GF LP  L    FE +EA   +FCG+ T +Y L+CWG+++F++N +VF    V+ G C   CPC   P    FCG+GLM+C  C    +  NP  V                P   S+  G +  W+ +NVA LVVGC+G+   + +L +L F+Y K  RG  RVHDSG LD+   PPQ  S     +        PVL+KRLSQ+ S+ NGG+LE+FS  VL++ T +FSDEHKIGSGSFGSVY A L+DGREVAIKRA+ +         GG  Y    RQ++ + AF+NELE LSRLNHKNLVRLLG+CED NE  LI+EYMNNG+LHDHLH  +++  MSWP RI+VALDAARGI+YLH YA PP+IHRDIKSSNILLD+TW AKVSDFGLSLMGPQ++ +HLS+ AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSGYKAIH NE R+PRNVVD++VPYIVQD IH VLD ++PPPTP EIE++AY+GYLA DC  L  +DRPTM+ +VN+LERAL AC A P  S S+T+ SS
Sbjct:    8 THLFFSLVFLCFLISFSPIS--SLSTVSISKT--SNQTLICALISSSSSFPQQSSLNCTSFPQGIQ------IPLNPSVSFSGIVGGNGFLCGLTSSYSSSTSIMVCWRFSNNGTNLSYKRIYLGPLITNLDSGNSHICGIVNN--RLECWQWHEFNSSNRSLMSSNLAVGEDFVCGLLEFGEIQCLGSFRNVTDAIPSGNYSEIASGSQHVCAISKNNSLICWG-NMVGEKPIGQFKSLALGDNRSCALRINGTVVCWGETGFSLPSSLSEEFFETLEAKQDIFCGIVTSNYSLFCWGNDIFNSNPVVFNGVQVVPGPCTTSCPCVPLPNYETFCGEGLMICTHCVWQESGVNPPIVNGSGPAPPPLPPQPMPPSTPSQTSGRSDPWSRRNVAFLVVGCIGSLMMLSVLVILFFKYCK-IRGC-RVHDSGRLDEAGSPPQQGSQTSGVQDQQGTPQPPVLKKRLSQLISIGNGGHLEEFSLQVLLQVTKNFSDEHKIGSGSFGSVYHARLEDGREVAIKRAEASA---SSSYAGGTKY----RQEDKDNAFLNELEFLSRLNHKNLVRLLGYCEDNNERVLIFEYMNNGTLHDHLHRLESSPLMSWPGRIKVALDAARGIEYLHEYAVPPVIHRDIKSSNILLDATWNAKVSDFGLSLMGPQDDETHLSMRAAGTVGYMDPEYYRLQQLTTKSDVYSFGVMLLELLSGYKAIHKNENRVPRNVVDFVVPYIVQDEIHRVLDHRVPPPTPFEIESVAYVGYLAADCTTLEGRDRPTMTQVVNTLERALKACLATPIFSRSNTDDSS 791
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6ULW9 ((serine/threonine-protein kinase-like protein CCR4 {ECO:0000313|RefSeq:XP_027091331.1}))

HSP 1 Score: 795.423 bits (2053), Expect = 0.000e+0
Identity = 412/783 (52.62%), Postives = 533/783 (68.07%), Query Frame = 0
 
Query:   10 FFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVM---QQRHQLSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSN---IICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRPG-AKFSGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIR-VDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWG-DEVFDANGLVFENVMAGVCRRECPCGASPGAGRFCGQGLMVCKPC--------DPVPTV--ENPVPVW-VPEPESKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFR-YKKGTRGSHRVHDSGPLDDVEMPPQLTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKR-QDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSS 770
            FF   L FL       P  ++S S   N  ++C+++   +Q+  L+C +F   +  R           SFS +VGG+G++C L    S+   + CWRF      +  KRIY GP++++L +G   ICG++   + LECW W++F     +  +  +AV  +FVCGL+  G+IQC G+ + V   V  G ++ VAAG  H CAIS+ G ++CWGD + G  P G FK LAL + RSC +R  +G V CWGE  F LP  L+ TSF ++EA G +FCGV T +Y L+CWG DE+ D+   VF +V+ G CR++CPC   P  G +C QG ++C+PC        +P P +   +P P+  VP   +K     W  K VA LVVGC+G+ S    L VLCF  YK     + RVHDSGP+DD    PQ +S ++A   P LEK+LS + S+ NG  LE+FS  VL+RATN+FS++HKIG+GSFGSVY  TL DG EVAIKRA+++ C S   A G      TKR Q++ +YAF++ELE LSRLNH+NLVRLLG+ EDCNE  L+YEY++NG+L DH+H  + +  MSW  RI+VALDAARGIQYLH YA PPIIHRDIKSSNILLD+TWTAKVSDFGLSLMGP +++S+LS+ AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSG KAIH N+  +PRNVVD++VPYIVQD IH VLD ++PPPTP EIEA+AY+GYLA DCV L  +DRPTM++IVNSLERAL AC A P LS SST SS
Sbjct:    8 FFTLVLCFLSSLPFICPLSTVSISQAGNQTLVCALIPSSKQQSHLNCTSFPEGIPIRVSPSF-----TSFSAIVGGNGFLCALRSSSSSTSIVFCWRFSSNVTNMAHKRIYDGPILEELDAGNSHICGLVSRTKRLECWHWKEFNSTSNSLITSSVAVAENFVCGLLRSGKIQCLGSFANVIDHVPAGIFTVVAAGFRHACAISLTGTLECWGD-MAGVKPSGQFKSLALAENRSCALRRPNGTVACWGENNFDLPIYLQQTSFISLEAKGNIFCGVATSNYSLFCWGNDEILDSKSTVFNSVIPGPCRKQCPCELLPNYGSYCSQGQVICQPCSIFLSSDKNPAPELAPSSPSPLLPVPRMNTKSSS-QWNKKLVAFLVVGCIGSLS---FLIVLCFLFYKHCKNKASRVHDSGPMDDPARAPQ-SSQQQAP--PALEKKLSHLISLGNGNRLEEFSLEVLLRATNNFSEKHKIGTGSFGSVYMGTLDDGLEVAIKRAEISSCSSYHHAGG------TKRSQEDKDYAFLHELEFLSRLNHRNLVRLLGYSEDCNERVLVYEYLDNGTLFDHIHKLENSPLMSWAARIKVALDAARGIQYLHEYAVPPIIHRDIKSSNILLDATWTAKVSDFGLSLMGPPDDVSYLSMSAAGTVGYMDPEYYRLQQLTTKSDVYSFGVVLLELLSGCKAIHKNKNEVPRNVVDFVVPYIVQDEIHRVLDQRMPPPTPFEIEAVAYVGYLAADCVRLEGRDRPTMTEIVNSLERALAACLATPRLSRSSTGSS 771
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2KUM7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 794.653 bits (2051), Expect = 0.000e+0
Identity = 422/784 (53.83%), Postives = 527/784 (67.22%), Query Frame = 0
 
Query:    1 MTTLSHCALFFLFSLSF---LPLSLVSLPTFSISRSPHDNSIVICSVMQQRHQ----LSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSNI-ICWRFGGGDGVVVSKRIYSGPV-VDDLASGRERICGVLGGGRSLECWQWRKFK--RPGAKFS-GGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFENVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPVWVPEPESKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDV-EMPPQLTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSSS 771
            M   SH  LFF+  LSF   +P  + SL T +IS +   N  +IC++++  HQ    L+C +F   ++      I      SFSG+V G G++CGL    S+I +CWRF     +   KRIY GP  + DL +G  RICG++ G   LECW W++F+  RP    +   +AVG +FVCGL  +G I C GN + V GG  RGNYS V+AG  H CAIS    + CWG+ +VG+ P+G F  LALG+ RSC +  +  VVCWGE  F LP  L+GT F  IEA   VFCGV   +Y LYCWG+EV D+  +VF+ V+ G C  +C CG    +   CGQG+ +CKPC+         P   P P+S H    W  K VA LVVGCVG+ + +++     ++Y K  RG  RVHDSG LD+    P  + SP +    PVLEKRLS + S+ NG  +E F   +L+ ATN+FS++HKIG+GSFGSVYRATL DGREVAIKRA+++               + KR+++N+ AF+NELE LSRLNHKNLVRLLGFCED NE  L+YEYM NG+L+DHLH  Q    MSW  RI+VALDAARGI+YLHVYA PPIIHRDIKSSNILLD TW AKVSDFGLSLM P +  SHLSL  AGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLE+LSGYKAIH NE  +PRNVVD++VPYI QD IH VLDPK+PPPTP EIEA+AY+GYLA DCV L  +DRP+M++IVN+L+RAL AC   P LS SST SS+
Sbjct:    1 MANNSHLLLFFIICLSFFSCIPF-VHSLSTVAISETA--NQTLICALIKPPHQQAFVLNCTSFPQGIQ------IPVNPNTSFSGIVAGYGFLCGLISPSSSIMVCWRFSTNGTITSYKRIYGGPAAIKDLDAGNSRICGLVNGTDQLECWPWQRFRDFRPSRDHNFSSVAVGENFVCGLSAIGNITCVGNNANVVGGEPRGNYSVVSAGFRHACAISENNSLDCWGE-MVGEKPQGKFISLALGENRSCALWHNETVVCWGENNFSLPERLQGTYFVTIEAKRSVFCGVVKANYSLYCWGNEVLDSKLMVFDKVVPGPCNSKCSCGILDLSSAICGQGVYICKPCEG--ETSPSPPPLAPPPQSSHHTSGWNKKMVAFLVVGCVGSSALILVCCFFLYKYCKD-RGCRRVHDSGRLDEPGTTPENVPSPHQQQAPPVLEKRLSHLVSLGNGVPMEQFPLQMLLEATNNFSEDHKIGTGSFGSVYRATLDDGREVAIKRAEISTSTPY----------VNKREEDNDNAFINELEALSRLNHKNLVRLLGFCEDSNERVLVYEYMKNGTLNDHLHKLQGTPLMSWAARIKVALDAARGIEYLHVYAVPPIIHRDIKSSNILLDDTWNAKVSDFGLSLMAPVDEESHLSLLGAGTVGYMDPEYYRLQQLTTKSDVYSFGVVLLEMLSGYKAIHRNENGVPRNVVDFVVPYIAQDEIHRVLDPKVPPPTPFEIEAVAYVGYLAMDCVNLEGRDRPSMTEIVNNLKRALDACLTHPKLSRSSTESST 761
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4B8P3 ((serine/threonine-protein kinase-like protein CCR4 {ECO:0000313|RefSeq:XP_016485244.1}))

HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0
Identity = 420/798 (52.63%), Postives = 531/798 (66.54%), Query Frame = 0
 
Query:    9 LFFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVMQQRHQ-----LSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSN----IICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRPGAKF-SGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFE--NVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPV----------------WVPEPESKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDVEMPPQ-------LTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSSS 771
            LFF   L FL          +++ S   N  ++C+++          L+C +F   ++      I     VSFSG+VGG+G++CGL    S+    ++CWRF      +  KRIY GP++ +L SG   ICG++     LECWQW +F        +  LAVG DFVCGL+  GQIQC G+   V   +  GNYS +A+G  H CAIS    ++CWG N+VG+ P G FK LALGD RSC ++++G VVCWGE GF LP  L    FE +EA   +FCG+ T +Y L+CWG+++F++N  VF    V+ G C   CPC   P    FCGQGLMVC+ CD   +  NP  V                  P   S   G+ W+ +NV  LVVGCVG+   + +L +L F+Y K  RG  RVHDSG LD+   PPQ       +   ++  + P LEKRLSQ+ S+ NGG+LE+FS  VL++ TN+FSDEHKIGSGSFGSVY ATL+DGREVAIKRA+ +   +     GG  Y    RQ++ + AF+NELE LSRLNHKNLVRLLG+CED NE  LI+EYMNNG+LHDHLH  +++  MSW  RI+VALDAARGI+YLH YA P +IHRDIKSSNILLD+TW AKVSDFGLSLMGPQ++ +HLS+ AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSGYKAIH NE R+PRNVVD++VPYIVQD IH VLD ++PPPTP EIE++AY+GYLA DC  L  +DRPTM+ +VN LERAL AC A P LS S+T+ SS
Sbjct:   10 LFFSLVLCFLISLSPISSLSTVAISKTSNQTLVCALISSSSFPQQSSLNCTSFPQGIQ------IPLNPSVSFSGIVGGNGFLCGLTSSYSSSTSIMVCWRFSHNGTNLSYKRIYLGPLITNLDSGNSHICGIVNN--RLECWQWHEFNSSNTSLITSNLAVGEDFVCGLLASGQIQCLGSFRNVTDTIPSGNYSEIASGSQHACAISKNNSLECWG-NMVGEKPIGQFKSLALGDNRSCALKINGTVVCWGETGFGLPSSLSEERFETLEAKQDIFCGIVTANYSLFCWGNDIFNSNPAVFNGVQVVPGPCTTSCPCARLPNYETFCGQGLMVCQHCDRPESGVNPPIVNGSGPSPPPPLPPQPTPTPSQTSGRSGL-WSRRNVTFLVVGCVGSLMMLSVLVILFFKYCK-IRGC-RVHDSGRLDEAGSPPQQGSQTSRVQDQQDTPQPPALEKRLSQLISIGNGGHLEEFSLQVLLQVTNNFSDEHKIGSGSFGSVYHATLEDGREVAIKRAEAS---ASSSYAGGTKY----RQEDKDNAFLNELEFLSRLNHKNLVRLLGYCEDNNERVLIFEYMNNGTLHDHLHRLESSPLMSWAGRIKVALDAARGIEYLHEYAVPAVIHRDIKSSNILLDATWNAKVSDFGLSLMGPQDDETHLSMRAAGTVGYMDPEYYRLQQLTTKSDVYSFGVMLLELLSGYKAIHKNENRVPRNVVDFVVPYIVQDEIHRVLDRRVPPPTPFEIESVAYVGYLAADCTTLEGRDRPTMTQVVNMLERALQACLATPILSRSNTDDSS 788
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2BHB8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 790.03 bits (2039), Expect = 0.000e+0
Identity = 417/789 (52.85%), Postives = 538/789 (68.19%), Query Frame = 0
 
Query:    8 ALFFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVMQ-----QRHQLSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSNI-ICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRPGAKF-SGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFE--NVMAGVCRRECPCGASPGAGRFCGQGLMVCKPC-----DPVPTVEN-----PVPVWVPEPESKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDVEMPPQL---TSPKEAARAP---VLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSSS 771
            +L F+FSLSF P+S +S    SI+ S   N  ++C+++      Q+  L+C +F   ++      I     VSF+G+VGG+G++CGL    ++I +CWRF      +  KR+Y GP++ +L SG   +CG++ G   L+CWQWR+F        +  LAVG DFVCGL+ L QIQC G+   V   V  GNYS +AAG  + CAIS+ G + CWG N+VG+ P   FK LALGD R CG++VDG+VVCWGE GF LP  L   SFE +EA   +FCG+ T +Y L+CWG+E+F++N +V++   V+ G C   CPC       RFCGQ LM+C  C        P++ N     P P+    P+       W+T+NV  LVVGCVG+   + +L +L  +Y K TRG  RVHDSG LD+   PPQ    TS  +    P   +LEKR S++ SM NGG+LE+FS  +L++ TN+FS+EHKIG+GSFGSVY ATL DGREVAIKRA+ +       A          RQ++ + AF+NELE LSRLNHKNLV L G+CED NE  L++EYMNNG+LHDHLH  +T++ +SW  RI+VALDAARGI+YLH YA P +IHRDIKSSNILLD+   AKVSDFGLSLMGPQE+ SHLSL AAGTVGY+DPEY+RLQQLTTKSDVYSFGV++LELLSGYKAIH NE  +PRNVVD++VPYIVQD IH VLD ++PPPTP EIEA++Y+GYLA DC  L  +DRPTM++IVN+LERAL AC   P  S S+T+SS+
Sbjct:   13 SLIFIFSLSFQPISSLS----SIAISKTSNQTLVCALISSSLYPQQSSLNCTSFPQGIQ------IPLNPSVSFTGIVGGNGFLCGLTSSSNSIMVCWRFSDNGTDLNYKRVYIGPLLTNLDSGNSHVCGIVNGTNRLQCWQWREFSSSNNSLITSNLAVGEDFVCGLLPLRQIQCLGSYRNVTDAVPVGNYSEIAAGSQYACAISMNGSLDCWG-NMVGEKPVDQFKSLALGDNRGCGLKVDGKVVCWGENGFSLPSYLSDISFETLEAKQDIFCGIETSNYSLFCWGNEIFNSNPVVYDGVQVVPGPCTTSCPCAPLGNYARFCGQELMICDHCVWPGFGQNPSIVNGSGPSPAPL---SPQPTPAPSQWSTRNVVFLVVGCVGSLMMLSVLVILFLKYCK-TRGC-RVHDSGRLDEAGTPPQQGSQTSQVQDQLGPQPSILEKRPSKLLSMGNGGHLEEFSLQLLLQVTNNFSEEHKIGTGSFGSVYHATLDDGREVAIKRAEAS-------ASSSYAGGSKYRQEDKDSAFLNELEFLSRLNHKNLVTLYGYCEDNNERVLVFEYMNNGTLHDHLHKLETSSLISWTARIKVALDAARGIEYLHEYAVPAVIHRDIKSSNILLDTNGNAKVSDFGLSLMGPQEDESHLSLRAAGTVGYMDPEYYRLQQLTTKSDVYSFGVMMLELLSGYKAIHKNENGVPRNVVDFVVPYIVQDEIHRVLDGRVPPPTPFEIEAVSYVGYLAADCTTLEGRDRPTMTEIVNNLERALQACLTTPNFSRSNTDSST 778
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834ZQT6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8411984.1}))

HSP 1 Score: 784.637 bits (2025), Expect = 0.000e+0
Identity = 421/768 (54.82%), Postives = 531/768 (69.14%), Query Frame = 0
 
Query:   20 LSLVSLPTFSISRSPHDNSIVICSVMQQRHQ---LSCKTFAH--QVEDRKYDEIGEFEGVSFSGVVGGDGYVCGL-DEDRSNIICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICG-VLGGGRS-LECWQWRKFKRPGAKFSGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFENVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPVWVPE-PESKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDVEMPPQ--LTS-----PKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSSS 771
            +S  SLPT SIS +   N+ +IC+++   ++   L+C +F+   Q+ +   +        S S +  G+G++C L     S++ C RF G   V   KRIY GP +++L SG   +CG ++G G S LECWQW  F     +   G+AVG +FVCG++  G+I+CFGN   +      GN+S VAAG  H CAISV GR+ CWG   VG+ P+G F  LALG+ RSC +R D +VVCWGE  F LP GL+ T F +IEA G VFCG+ T ++ L+CWG+E+F++N +VFE V+ G CR +CPC   P +G +C QG  +C+PC+      NP     PE PE+ +GG     K VA LVVG VGT S  I++    FRY KG RG  RVHDSG L+   + P+  LT+       +  +AP LEKRLSQM SM   GNLE+FS   L++AT +FS EHKIGSGSFGSVYRATLQDGREVAIKRA+L+   S  G         TKRQ++ E AF++EL  LSR+NHKNLVRLLGFCE+ NE  L+YE M NG+LH+HLH  Q++  MSWP R QVALDAARGI+YLH YA P IIHRDIKSSNILLD+ W+AKVSDFGLSL+GP++  SH+SL AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSGY+AIH NE  +PRNVVD++VPYIV D IH VLDPK+P PTP EIEA+ Y+G+LA DCV L  +DRP+M++IVN LERAL AC A P LS S+T SSS
Sbjct:   16 VSTSSLPTVSISET--SNNTLICALIPSANRQSFLNCTSFSSGIQIPNTSLN-------ASISSIAAGNGFLCILRSPPSSSLHCSRFSGNGTVSRFKRIYPGPALNELESGNSHVCGTIVGNGVSRLECWQWEGFNSTVRRNLSGIAVGEEFVCGVLEFGKIECFGNNRDIIDNTPDGNFSVVAAGFHHACAISVDGRLHCWGQT-VGEKPEGEFTSLALGNNRSCAVRDDEKVVCWGENEFNLPEGLQETDFISIEAKGRVFCGILTYNFSLFCWGNEIFESNAMVFEKVLPGPCRTDCPCKFLPDSGTYCSQG-YICRPCEREVASGNP-----PESPENSNGG---DEKRVAFLVVGIVGTASLAIVICFFLFRYCKG-RGC-RVHDSGRLEQTGVSPEPGLTARPAHETHDPVQAPSLEKRLSQMVSM---GNLEEFSLQELLQATGNFSLEHKIGSGSFGSVYRATLQDGREVAIKRAELSTSSSYAGN--------TKRQEDKEDAFISELAFLSRVNHKNLVRLLGFCEEGNENVLVYELMTNGTLHEHLHKLQSSPLMSWPARFQVALDAARGIEYLHTYAVPSIIHRDIKSSNILLDAMWSAKVSDFGLSLLGPEDEESHISLRAAGTVGYMDPEYYRLQQLTTKSDVYSFGVVLLELLSGYRAIHKNENGVPRNVVDFVVPYIVADEIHRVLDPKVPAPTPFEIEAVTYVGFLALDCVSLEGRDRPSMTEIVNRLERALAACGAPPLLSRSTTGSSS 751
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068V6S6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 784.637 bits (2025), Expect = 0.000e+0
Identity = 408/777 (52.51%), Postives = 525/777 (67.57%), Query Frame = 0
 
Query:   10 FFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVM---QQRHQLSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSN---IICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRP-GAKFSGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRV-DGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWG-DEVFDANGLVFENVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPVWVPEPE-----SKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFR-YKKGTRGSHRVHDSGPLDDVEMPPQLTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKR-QDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSS 770
            FF   L FL       P  ++S S   N  ++C+++   +Q+  L+C +F   +  R    +      SFS +VGG+G++C L    S+   + CWRF      +  KRIY GP++++L +G   ICG++   + LECWQW++F     +  +  +AV  +FVCGL+  G+IQC G+ + V   V  G ++ VAAG  H CAIS+ G ++CWG  + G  P G FK LAL + RSC +R  +G V CWGE  F LP  L+ TSF ++EA G VFCGV T +Y L+CWG DE+ D+   VF +V+ G CR++CPC   P  G +C QG ++C+PC    + +   P            +      W  K VA LVVGC+G+ S    L VLCF  YK     + RVHDSGP+DD    PQ +S ++A   P LEK+LS + SM NG  LE+FS  VL+RATN+FS++HKIG+GSFGSVY  TL DG EVAIKRA+++ C S   A G      TKR Q++ +YAF++ELE LSRLNH+NLVRLLG+ EDCNE  L+YEY++NG+L DH+H  + +  MSW  RI+VALDAARGIQYLH YA PPIIHRDIKSSNILLD+TWTAKVSDFGLSLMGP +++S+LS+ AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSG KAIH N+   PRNVVD++VPYIVQD IH VLD ++PPPTP EIEA+AY+GYLA DCV L  +DRPTM++IVNSLERAL AC A P LS SST SS
Sbjct:    8 FFTLVLCFLSSLPFICPLSTVSISQAGNQTLVCALIPSSKQQSHLNCTSFPEGIPIRVGPSL-----TSFSAIVGGNGFLCALRSSSSSTSIVFCWRFSSNVTNMAHKRIYVGPILEELDAGNSHICGLVSRTKRLECWQWKEFNSTRNSLITSSVAVAENFVCGLLKSGKIQCLGSFANVTDHVPAGIFTVVAAGFRHACAISLTGTLECWG-GMAGVKPSGQFKSLALAENRSCALRRPNGTVACWGENNFDLPIYLQQTSFISLEAKGNVFCGVATSNYSLFCWGNDEILDSKATVFNSVIPGPCRKQCPCELLPNYGSYCSQGQVICQPCSIFLSSDKNPPSSPSPLLPVPRMNTKSSSQWNKKLVAFLVVGCIGSLS---FLIVLCFLFYKHCKNKASRVHDSGPMDDPARAPQ-SSQQQAP--PGLEKKLSHLISMGNGNRLEEFSLEVLLRATNNFSEKHKIGTGSFGSVYMGTLDDGLEVAIKRAEISSCSSYHHAGG------TKRSQEDKDYAFLHELEFLSRLNHRNLVRLLGYSEDCNERVLVYEYLDNGTLFDHIHKLENSPLMSWAARIKVALDAARGIQYLHEYAVPPIIHRDIKSSNILLDATWTAKVSDFGLSLMGPPDDVSYLSMSAAGTVGYMDPEYYRLQQLTTKSDVYSFGVVLLELLSGCKAIHKNKNDEPRNVVDFVVPYIVQDEIHRVLDQRMPPPTPFEIEAVAYVGYLAADCVRLEGRDRPTMTEIVNSLERALAACLATPRLSRSSTGSS 766
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8GFM1 ((serine/threonine-protein kinase-like protein CCR4 {ECO:0000313|RefSeq:XP_016570107.1}))

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 418/794 (52.64%), Postives = 533/794 (67.13%), Query Frame = 0
 
Query:    5 SHCALFFLF-SLSFLPLSLVSLPTFSISRSPHDNSIVICSVMQQRHQ-----LSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGL-DEDRSNIICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRPGAKF-SGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFE--NVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPV----------WVPEPESKHGGVN--WTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDVEMPPQLTSPKEAAR------APVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSS 770
            +H   F +F SL F P+S  SL T +ISR+   N  ++C+++          L+C +F   ++      I     V FSG+VGG G++CGL   D + ++CWRF      +  KRIY GP++ +L SG  +ICG++ G   L+CWQW +F        +  LAVG DFVCGL+ LGQIQC G+   V   V  GNYS +AAG  + CAIS  G + CWG  +VG+ P   FK LALGD RSC +R++G VVCWGE GF LP  L   SFE +EA   +FCG+ T ++ L+CWG+++F++N  VF    V+ G C   CPC   P  GRFCGQ LM+C+ C P    ENP  V          +     S+  G +  W T+NVA LVVGCVG+   + +L +L  +Y K  RG  RVHDSG LD+   PPQ  S     +       PVLEKRL+Q+ SM NGG+L++FS  VL++ TN+FS+EHKIG+GSFGSVY ATL+DGREVAIKRA+ +       A          RQ++ + AF+NELE LSRLNHKNLVRLLG+CED NE  L++EYMNNG+LHDHLH  + +   SW  RI+VAL+AARG++YLH YA P +IHRDIKSSNILLD+   AKVSDFGLSL+GPQ++ +HLSL AAGTVGY+DPEY+RLQQLTTKSDVYSFGV +LELLSGYKAIH NE  +PRNVVD++VPYIVQD IH VLD ++PPPTP EIEA++Y+GYLA DC  L  +DRPTM++IVN+LERA LAC A P  S S+T+SS
Sbjct:    8 THLFFFLVFISLCFPPIS--SLSTLAISRT--SNHTLVCALISSSSFPRESSLNCTSFPQGIQ------IPLNPSVPFSGMVGGIGFLCGLTSSDPTVMVCWRFSNNGTDLTYKRIYVGPLLTNLDSGNSQICGIVNGTNRLQCWQWHEFSSSNRSLITSNLAVGQDFVCGLLRLGQIQCLGSFRDVIDAVPSGNYSEIAAGSQYACAISRNGSLACWG-KMVGEKPIDRFKSLALGDTRSCALRINGTVVCWGENGFTLPSSLSDASFETLEAKQDIFCGIVTSNFSLFCWGNDIFNSNPAVFNGVEVVPGPCTTSCPCSRLPNYGRFCGQELMICQHCVP-EFGENPPIVSGSGPSPPPLFPQPTPSQWTGSSDPWNTRNVAFLVVGCVGSFMILSVLVILFLKYCK-IRGC-RVHDSGRLDEAGTPPQQGSQTSQVQDQVGPQLPVLEKRLNQLISMGNGGHLQEFSLLVLLQVTNNFSEEHKIGTGSFGSVYHATLEDGREVAIKRAEAS-------ASSSYAGGSKYRQEDKDSAFLNELEFLSRLNHKNLVRLLGYCEDNNERVLVFEYMNNGTLHDHLHRLENSPLTSWTARIKVALNAARGVEYLHEYAVPTVIHRDIKSSNILLDTNGNAKVSDFGLSLLGPQDDETHLSLRAAGTVGYMDPEYYRLQQLTTKSDVYSFGVTMLELLSGYKAIHKNENGVPRNVVDFVVPYIVQDEIHRVLDRRVPPPTPFEIEAVSYVGYLAADCTTLEGRDRPTMTEIVNNLERAFLACLATPNFSRSNTDSS 780
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6UUE5 ((serine/threonine-protein kinase-like protein CCR4 {ECO:0000313|RefSeq:XP_027093986.1}))

HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0
Identity = 408/777 (52.51%), Postives = 525/777 (67.57%), Query Frame = 0
 
Query:   10 FFLFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVM---QQRHQLSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSN---IICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRSLECWQWRKFKRP-GAKFSGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRV-DGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWG-DEVFDANGLVFENVMAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPVWVPEPE-----SKHGGVNWTTKNVALLVVGCVGTCSSVILLFVLCFR-YKKGTRGSHRVHDSGPLDDVEMPPQLTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKR-QDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSS 770
            FF   L FL       P  ++S S   N  ++C+++   +Q+  L+C +F   +  R    +      SFS +VGG+G++C L    S+   + CWRF      +  KRIY GP++++L +G   ICG++   + LECWQW++F     +  +  +AV  +FVCGL+  G+IQC G+ + V   V  G ++ VAAG  H CAIS+ G ++CWG  + G  P G FK LAL + RSC +R  +G V CWGE  F LP  L+ TSF ++EA G VFCGV T +Y L+CWG DE+ D+   VF +V+ G CR++CPC   P  G +C QG ++C+PC    + +   P            +      W  K VA LVVGC+G+ S  I   VLCF  YK     + RVHDSGP+DD    PQ +S ++A   P LEK+LS + SM NG  LE+FS  VL+RATN+FS++HKIG+GSFGSVY  TL DG EVAIKRA+++ C S   A G      TKR Q++ +YAF++ELE LSRLNH+NLVRLLG+ EDCNE  L+YEY++NG+L DH+H  + +  MSW  RI+VALDAARGIQYLH YA PPIIHRDIKSSNILLD+TWTAKVSDFGLSLMGP +++S+LS+ AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSG KAIH N+   PRNVVD++VPYIVQD IH VLD ++PPPTP EIEA+AY+GYLA DCV L  +DRPTM++IVNSLERAL AC A P LS SST SS
Sbjct:    8 FFTLVLCFLSSLPFICPLSTVSISQAGNQTLVCALIPSSKQQSHLNCTSFPEGIPIRVGPSL-----TSFSAIVGGNGFLCALRSSSSSTSIVFCWRFSSNVTNMAHKRIYVGPILEELDAGNSHICGLVSRTKRLECWQWKEFNSTRNSLITSSVAVAENFVCGLLKSGKIQCLGSFANVTDHVPAGIFTVVAAGFRHACAISLTGTLECWG-GMAGVKPSGQFKSLALAENRSCALRRPNGTVACWGENNFDLPIYLQQTSFISLEAKGNVFCGVATSNYSLFCWGNDEILDSKSTVFNSVIPGPCRKQCPCELLPNYGSYCSQGQVICQPCSIFLSSDKNPPSSPSPLLPVPRMNTKSSSQWNKKLVAFLVVGCIGSLSFSI---VLCFLFYKHCKNKASRVHDSGPMDDPARAPQ-SSQQQAP--PGLEKKLSHLISMGNGNRLEEFSLEVLLRATNNFSEKHKIGTGSFGSVYMGTLDDGLEVAIKRAEISSCSSYHHAGG------TKRSQEDKDYAFLHELEFLSRLNHRNLVRLLGYSEDCNERVLVYEYLDNGTLFDHIHKLENSPLMSWAARIKVALDAARGIQYLHEYAVPPIIHRDIKSSNILLDATWTAKVSDFGLSLMGPPDDVSYLSMSAAGTVGYMDPEYYRLQQLTTKSDVYSFGVVLLELLSGCKAIHKNKNDEPRNVVDFVVPYIVQDEIHRVLDQRMPPPTPFEIEAVAYVGYLAADCVRLEGRDRPTMTEIVNSLERALAACLATPRLSRSSTGSS 766
[Close]
BLAST of XM_017388236.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VZP1 ((serine/threonine-protein kinase-like protein CCR4 {ECO:0000313|RefSeq:XP_009771838.1}))

HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0
Identity = 417/800 (52.12%), Postives = 533/800 (66.62%), Query Frame = 0
 
Query:    9 LFF-LFSLSFLPLSLVSLPTFSISRSPHDNSIVICSVMQQRHQ-----LSCKTFAHQVEDRKYDEIGEFEGVSFSGVVGGDGYVCGLDEDRSN----IICWRFGGGDGVVVSKRIYSGPVVDDLASGRERICGVLGGGRS-LECWQWRKFKRPG-AKFSGGLAVGGDFVCGLVGLGQIQCFGNLSGVGGGVFRGNYSSVAAGLGHFCAISVRGRIKCWGDNLVGDPPKGLFKGLALGDGRSCGIRVDGRVVCWGEGGFRLPWGLEGTSFEAIEANGGVFCGVGTKDYGLYCWGDEVFDANGLVFENV--MAGVCRRECPCGASPGAGRFCGQGLMVCKPCDPVPTVENPVPV--------------WVPEPESKHGGVN--WTTKNVALLVVGCVGTCSSVILLFVLCFRYKKGTRGSHRVHDSGPLDDVEMPPQ-------LTSPKEAARAPVLEKRLSQMFSMENGGNLEDFSFSVLVRATNSFSDEHKIGSGSFGSVYRATLQDGREVAIKRAQLTKCPSLDGARGGVNYNITKRQDENEYAFVNELECLSRLNHKNLVRLLGFCEDCNEYALIYEYMNNGSLHDHLHNPQTNATMSWPTRIQVALDAARGIQYLHVYADPPIIHRDIKSSNILLDSTWTAKVSDFGLSLMGPQENMSHLSLHAAGTVGYIDPEYFRLQQLTTKSDVYSFGVLLLELLSGYKAIHLNEERMPRNVVDYMVPYIVQDNIHHVLDPKLPPPTPLEIEAIAYIGYLATDCVMLGSQDRPTMSDIVNSLERALLACFAAPALSHSSTNSSS 771
            LFF L  L FL          +++ S   N  +IC+++          L+C +F   ++      I     V FSG+VGG+G++CGL    S+    ++CWRF      +  K IY GP++ +L SG   ICG++ G  + LECWQW +F     +  +  LAVG DFVCGL+  GQIQC G+   V   +  GNYS +A+G  H CAIS    + CWG N+VG+ P G FK LALGD RSC +R++G+VVCWGE GF LP  L G  FE +EA   +FCG+ T +Y L+CWG+++F++N  VF  V  + G C   CPC   P    FCG+GLM+C+ C    +  NP  V                    S+  G +  W+ +NVA LVVGCVG+   + +L +L F+Y K  RG  RVHDSG LD+   PPQ       +   +   + PVLEKRLSQ+ S+ NGG+LE+FS  VL++ TN+FSDEHKIGSGSFG+VY ATL+DGREVAIKRA+ +   +     GG  Y    RQ++ + AF+NELE LSRLNHKNLV+LLG+CED NE  LI+EYMNNG+LHDHLH  +++  MSW  RI+VALDAARGI+YLH YA P +IHRDIKSSNILLD TW AKVSDFGLSLMGPQ++ +HLS+ AAGTVGY+DPEY+RLQQLTTKSDVYSFGV+LLELLSGYKAIH NE ++PRNVVD++VPYIVQD IH VLD ++PPPTP EIE++AY+GYLA DC  L  +DRPTM+ +VN+LERAL AC A P  S S+T+ SS
Sbjct:   10 LFFSLVLLCFLISLSPISSLSTVAISKTSNQTLICALISSSSFPQQSSLNCTSFPEGIQ------IPLNPSVYFSGIVGGNGFLCGLTSSYSSSTSIMVCWRFLNNGTNLSYKSIYLGPLITNLDSGNSHICGIVNGTNNRLECWQWHEFNSSNRSLMTSNLAVGEDFVCGLLTFGQIQCLGSFRNVTDAIPSGNYSEIASGSQHVCAISKNNSLVCWG-NMVGEKPIGQFKSLALGDNRSCALRINGKVVCWGETGFSLPSSLSGEFFETLEAKQDIFCGIVTSNYSLFCWGNDIFNSNPAVFNGVGVVPGPCTTSCPCVPLPNYESFCGRGLMICQHCVGQDSSVNPPIVNGSGPSLPPLPPQPMPSPTPSQTSGRSDPWSRRNVAFLVVGCVGSLMMLSVLVILFFKYCK-IRGC-RVHDSGRLDEAGSPPQQGSQTSRVQDQQGTPQPPVLEKRLSQLISIGNGGHLEEFSLQVLLQVTNNFSDEHKIGSGSFGAVYHATLEDGREVAIKRAEAS---ASSSYAGGTKY----RQEDKDNAFLNELEFLSRLNHKNLVKLLGYCEDNNERVLIFEYMNNGTLHDHLHGLESSPLMSWVGRIKVALDAARGIEYLHEYAVPTVIHRDIKSSNILLDVTWNAKVSDFGLSLMGPQDDETHLSMRAAGTVGYMDPEYYRLQQLTTKSDVYSFGVMLLELLSGYKAIHKNENKVPRNVVDFVVPYIVQDEIHRVLDRRVPPPTPFEIESVAYVGYLAADCTTLEGRDRPTMTQVVNTLERALKACLATPIFSRSNTDDSS 793
Match NameStatsDescription
A0A1J6IUH1E-Value: 0.000e+0, PID: 52.85(Serinethreonine-protein kinase-like protein ccr4 ... [more]
A0A6P6ULW9E-Value: 0.000e+0, PID: 52.62(serine/threonine-protein kinase-like protein CCR4... [more]
A0A7N2KUM7E-Value: 0.000e+0, PID: 53.83Protein kinase domain-containing protein {ECO:0000... [more]
A0A1S4B8P3E-Value: 0.000e+0, PID: 52.63(serine/threonine-protein kinase-like protein CCR4... [more]
A0A6N2BHB8E-Value: 0.000e+0, PID: 52.85Protein kinase domain-containing protein {ECO:0000... [more]
A0A834ZQT6E-Value: 0.000e+0, PID: 54.82(Uncharacterized protein {ECO:0000313|EMBL:KAF8411... [more]
A0A068V6S6E-Value: 0.000e+0, PID: 52.51Protein kinase domain-containing protein {ECO:0000... [more]
A0A1U8GFM1E-Value: 0.000e+0, PID: 52.64(serine/threonine-protein kinase-like protein CCR4... [more]
A0A6P6UUE5E-Value: 0.000e+0, PID: 52.51(serine/threonine-protein kinase-like protein CCR4... [more]
A0A1U7VZP1E-Value: 0.000e+0, PID: 52.13(serine/threonine-protein kinase-like protein CCR4... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.