XM_017393041.1

Resource Type: 
Polypeptide
Name: 
XM_017393041.1
Identifier: 
XM_017393041.1-protein
Sequence: 
MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQS
PEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAI
AGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKE
EQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGV
QHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESI
KKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERI
KTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSC
SPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVK
TTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLED
KLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNES
KELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDEL
TRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSL
ATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSSEL
SAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSK
SGVQLGNHQGLN
Sequence Length: 
712
Sequence Checksum: 
fd2f5bb98a84f32fa8381d76081d04f6
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017393041.1, derives from mRNA, XM_017393041.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6L5BDS5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002862.1}))

HSP 1 Score: 1136.32 bits (2938), Expect = 0.000e+0
Identity = 594/713 (83.31%), Postives = 642/713 (90.04%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGN-HQGLN 712
            MEKR+WLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVT+K  V NGEVNDGIKILTEKLSAALVNVGAKEDLVKQHA VAEEAIAGWEKAENEV ++KQQLEAAVQQNLGLEVRVNHLD ALKECVRQLRQAKEEQ+QRIH+AL EKSNEW+TTR +LESELL+LQNQV+EV+D  P+ ID G   KL+S+EKENA LK EL  LSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQ GVRKSL+VN  KSPAASSLSVESLADSQSDNGERIK LD D Y+  GID   GDK CSDSWASALIAELDHFKAEKTS+KNLTS S DIDIMDDFLEMERLAALPE E KTC++ESESVSCQTN+TESSLRDEVKT  QR+AELE  L QIEAEKESI CRANETE MLR +LDT+TQRVAVLEDKLEKIEAEK+EL  +LIAS +SV+ SKAQL ETETRLEQLQKELN MNES++LLEYQLVGME EI TM+KEVDTL LD++KE+N+SA+MV+KC++LE EL R+++E ELHQ KSSD D+KL QEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDT NVPRLRRGES+VPPAVGAEPWKLHSNE+FLP+RDP SELS E PTP++NG  KES  SASSSSSSDASLNH SSGKSK+GFGK FSRSKSGVQL N HQG N
Sbjct:    1 MEKRSWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTTKFAVPNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHANVAEEAIAGWEKAENEVLVIKQQLEAAVQQNLGLEVRVNHLDSALKECVRQLRQAKEEQDQRIHDALAEKSNEWDTTRNKLESELLKLQNQVREVEDKDPVRIDTGAHLKLKSLEKENAALKLELVYLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQVGVRKSLLVNVHKSPAASSLSVESLADSQSDNGERIKALDVDEYKIRGIDATVGDKSCSDSWASALIAELDHFKAEKTSSKNLTSYSLDIDIMDDFLEMERLAALPEAEDKTCDIESESVSCQTNNTESSLRDEVKTRNQRLAELEEKLQQIEAEKESIVCRANETEIMLRVKLDTVTQRVAVLEDKLEKIEAEKAELANALIASNDSVEHSKAQLTETETRLEQLQKELNMMNESRDLLEYQLVGMEAEICTMTKEVDTLQLDIEKERNLSADMVVKCQELEHELIRKSREAELHQEKSSDGDLKLKQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTQNVPRLRRGESAVPPAVGAEPWKLHSNETFLPRRDPGSELSGEIPTPVMNGNTKESSASASSSSSSDASLNHSSSGKSKNGFGKFFSRSKSGVQLENYHQGQN 713    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BWN1 ((Putative Filament-like plant protein isoform 1 {ECO:0000313|EMBL:MPA72997.1}))

HSP 1 Score: 740.725 bits (1911), Expect = 0.000e+0
Identity = 435/711 (61.18%), Postives = 531/711 (74.68%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPS-SELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQG 710
            MEKR WLWK+KSSEKSPG+T+SS SISSHSERYS +QE LK   N  +QSPEVTSK  V++ EVND +K LTEKLSAALVNV AK+DLVKQH KVAEEA+AGWEKAENE+++L+QQLEAAVQ+NL LE RV+HLDGALKECVRQLRQA+EEQEQRIHEA+ EK+ +WE+T+ ELES+LLELQ Q +  K   P  +D  +  KLES+EKEN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRLQA  RKS M+N+  S AASS+ V+ L DSQS++ ER+  ++ +  + S +  N  +  CSDSWASALIAELD F+  K  NKNLT+CS +IDIMDDFLEMERLAALPE ++K   VESE+V+CQ+ + E+ LR E+                                       D M  RVA LE+KLEKIEAEK+EL  +L AS +S++ S+ +L E       LQ+EL A+NESKELLE+QL+GMEVE RTMS +VD+L  +V+KEQ++SAEM +KC++LE+ELTR+TQEVELHQ  SS+ ++K+ QEDLVVAA KLAECQKTIASLGRQLKSLATLEDFL DTP++P      S + P    E WKLHSNE+F+PK D   S++  E   P +NG + ESP S+SSS+ S   LNH++S KS++GFGKLFSRSKS +Q+ N QG
Sbjct:    1 MEKRKWLWKRKSSEKSPGETESSESISSHSERYSDDQEALKASPNHHTQSPEVTSKAVVTSEEVNDRVKGLTEKLSAALVNVSAKDDLVKQHVKVAEEAVAGWEKAENELAVLEQQLEAAVQKNLALEDRVSHLDGALKECVRQLRQAREEQEQRIHEAVVEKTRDWESTKLELESQLLELQTQAEAAKTESPASVDHDLHIKLESLEKENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLQAMARKSSMLNDHNSVAASSVYVDYLTDSQSNSSERLNAVETNTQKVSRLGLNECEPSCSDSWASALIAELDQFRNGKAINKNLTACSVEIDIMDDFLEMERLAALPEFKNKNHCVESEAVACQSTNGENPLRAEL---------------------------------------DAMIHRVAELEEKLEKIEAEKAELENALTASQDSLETSQVKLVE-------LQRELIAVNESKELLEFQLIGMEVEARTMSAKVDSLKAEVEKEQSLSAEMAVKCQELEEELTRKTQEVELHQTASSNGELKIKQEDLVVAAGKLAECQKTIASLGRQLKSLATLEDFLIDTPSIPCFSGDGSLIHPRTSGELWKLHSNETFMPKSDSDPSKIPGENSGPSMNGNDGESPASSSSSTPSAMLLNHVTSAKSRNGFGKLFSRSKSTIQIENQQG 665    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1ACV0 ((filament-like plant protein {ECO:0000313|RefSeq:XP_021284782.1, ECO:0000313|RefSeq:XP_021284783.1}))

HSP 1 Score: 728.783 bits (1880), Expect = 0.000e+0
Identity = 417/752 (55.45%), Postives = 525/752 (69.81%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMN----------------------------------------------ESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSS-ELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQL 705
            MEKR WLWKKKSSE+SPG+T+SSGSISSHSERYS +QE  K   N  +QSPEV+SK + +  +VND IK LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAENEV +LKQ+LEAAVQQN  LE RV+HLDGALKECVRQLRQA+EEQEQ+I+EA+ + + +WETT++ELES+LLELQ++ + VK   P    P + HK+E++EKEN+ LK EL S SEE EIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A   KS +VN+ KSP ASS+ VESL DSQSD+GER+  ++ D ++ SG++ N G+  CSDSWASALIA LD FK EK  N+NL S S +ID+MDDFLEMERLAALPE +S+   VES++ + Q++D +SSL+ E++    R AELE  L                                       EKIE EK+EL  +L  S ES++ S  QL++TET+LE+L++E +  N                                              ESK+LLE QL+ +E E RTMS ++D+L  +V+KE+ +SA++ +KC++LE+EL+R+ QE EL Q  +S+ +VK+ QEDL VAA KLAECQKTIASLG+QLKSLATLEDFL DT ++P   RG S +P A G EPWKLHSNE++ PKRDP S  ++A+   P VN  +  +P  +SSSSSS  S NH SS K+++GF K F+RSK+G+QL
Sbjct:    1 MEKRKWLWKKKSSERSPGETESSGSISSHSERYSDDQEAFKASPNNNAQSPEVSSKASANCEDVNDSIKSLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVVLLKQKLEAAVQQNSALEDRVSHLDGALKECVRQLRQAREEQEQKINEAVAKTTRDWETTKFELESQLLELQDKAEAVKSEPPPHFSPDLWHKIEALEKENSALKLELSSQSEEFEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKARACKSSLVNDHKSPVASSIYVESLTDSQSDSGERLNVVEIDTHKMSGLEANKGEPSCSDSWASALIAGLDQFKNEKVINRNLASSSIEIDLMDDFLEMERLAALPEIKSENQCVESKATAKQSSDADSSLKAELEAMIHRTAELEQKL---------------------------------------EKIELEKAELEIALAKSQESLEASALQLRDTETKLEELEREFHMANEAKQHLEFQLSSMETDAETMSAKIDSLEAKIEKERALSAEVSVNATESKQLLESQLISIEAEARTMSAKIDSLETEVEKERALSAQITVKCQELEEELSRKRQEAELQQTANSNVEVKIKQEDLAVAAGKLAECQKTIASLGQQLKSLATLEDFLIDTTSIPEFSRGGSLIPKA-GGEPWKLHSNETYSPKRDPDSPRVNADHSGPSVNKNDGNTP-PSSSSSSSIVSSNHASSEKNRNGFAKFFTRSKNGIQL 711    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061FP54 ((Filament-like plant protein, putative isoform 1 {ECO:0000313|EMBL:EOY16299.1}))

HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0
Identity = 414/752 (55.05%), Postives = 524/752 (69.68%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMN----------------------------------------------ESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSS-ELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQL 705
            MEKR WLWK+KSSE+SPG+T+SSGS+SSHSERYS +QE  K   N  +QSPEV+SK + +  +VND IK LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAENEV +LKQ+LEAAVQQN  LE RV+HLDGALKECVRQLRQA+EEQEQ+I+EA+ + + +WETT++ELES+ LELQ++ + VK   P    P + HK+E++EKEN+ LK EL S SEE EIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A   KS +VN+ KSPAASS+ VES+ DSQSD+GER+  ++ D ++ SG++ N G+  CSDSWASALIAELD FK EK  ++NL S S +ID+MDDFLEMERLAALPE +S+   +ES++ + Q+ND +SSL+ E++    R AELE  L                                       EKIE EK+EL  +L  S ES++ S  QL++TET+LE+L++E +  N                                              ESK+LLE QL+ +E E RTMS ++D+L  +V+KE+ +SA++ +KC++LE+EL R+ QE EL Q  +S+ +VK+ QEDL VAA KLAECQKTIASLG+QLKSLATLEDFL DT ++P   RG S V  A G EPWKLHSNE++ PKRDP S  ++A+   P VN  +  +P  +SSSSSS  S NH SS K+++GF K F+RSK+G+QL
Sbjct:    1 MEKRKWLWKRKSSERSPGETESSGSLSSHSERYSDDQEAFKASPNNNAQSPEVSSKASANCEDVNDSIKRLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVVLLKQKLEAAVQQNSALEDRVSHLDGALKECVRQLRQAREEQEQKINEAVAKTTRDWETTKFELESQFLELQDKAEAVKSEPPPHFSPDLWHKIEALEKENSALKLELSSQSEEFEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKAIACKSSLVNDHKSPAASSIYVESVTDSQSDSGERLNVVEIDTHKMSGLEANKGEPSCSDSWASALIAELDQFKNEKVISRNLPSSSIEIDLMDDFLEMERLAALPEIKSENQFLESKATARQSNDGDSSLKAELEAMIHRTAELEQKL---------------------------------------EKIELEKAELEIALAKSQESLEASALQLRDTETKLEELEREFHMANEAKQHLESQLSSMETDAETMSSKIDSLKAEIEKEMALSAEISVNATESKQLLESQLISIEAEARTMSAKIDSLETEVEKERALSAQITVKCQELEEELLRKRQEAELQQTANSNVEVKIKQEDLAVAAGKLAECQKTIASLGQQLKSLATLEDFLIDTTSIPEFSRGGSLVSKA-GGEPWKLHSNETYSPKRDPDSPRVNADHSGPSVNKNDGNTP-PSSSSSSSIVSSNHASSEKNRNGFAKFFTRSKNGIQL 711    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BB76 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8538461.1}))

HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0
Identity = 432/753 (57.37%), Postives = 518/753 (68.79%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSG-EQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVK-----------------------------------------LNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSS-ELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQG 710
            MEKR WLWK+KSSEKSPG+T+SS SISSHSERYS  +QE LK   N  +QSPEVTSK  V+ GE+ND +K LTEKLSAALVNV AKEDLVKQHAKVAEEA+AGWEKAEN+V++LKQQLEAAVQ+NL LE RV+HLDGALKECVRQLRQA+EEQEQRIHEA+ +K+ EWE T+ ELES+LLE Q Q    K   P  +D     KLES+E EN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRLQA  RKS MVN+ KS AASS+ VE L DSQSD+ ER+  ++ D  + S  + N  +  CSD WASALIAELD F+  K  N NLT+CS DIDIMDDFLEMERLAALPE ++K   VE E+V+CQ+ + E+ LR                                       ++LD M  RV  LE+KLEKIEAEK+EL  +L  S  S++ S+ QL + E RL +LQ+EL A+N SKELLE+QL+G+EVE RTMS +V+       KEQ++SAEM +KC++LE+ELTR+T+EVELH+   S+ ++K                                         L+QEDL VAA KLAECQKTIASLGRQLKSLATLEDFL DT N+P    GE+ +P   G E WK HSNE+F+P+ D    ++  E   P V G N E   ++SSSSSS  SLNH++S K ++GFGKLFSRSKS +QL N QG
Sbjct:    1 MEKRKWLWKRKSSEKSPGETESSESISSHSERYSDDQQEALKASPNHDTQSPEVTSKAIVTCGEINDSVKGLTEKLSAALVNVSAKEDLVKQHAKVAEEAVAGWEKAENDVAVLKQQLEAAVQKNLALEDRVSHLDGALKECVRQLRQAREEQEQRIHEAVVDKTREWEFTKLELESQLLEFQTQADAAKTESPASVDRDFHIKLESLENENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLQAMARKSSMVNDHKSIAASSVYVEYLTDSQSDSSERLNAVETDAQKVSRSELNECEPSCSDLWASALIAELDQFRNGKAINNNLTACSVDIDIMDDFLEMERLAALPEFKNKNHCVELEAVACQSTNGENPLR---------------------------------------SKLDAMIHRVTELEEKLEKIEAEKAELENALTVSQHSLEASQVQLTDAEMRLVELQRELTAVNASKELLEFQLIGVEVEARTMSAKVE-------KEQSLSAEMAVKCQELEEELTRKTKEVELHKTSGSNGELKIKQVGFPTCIFTLHAYFSMVIVTCRWKNSQPSSSEMMVKLVLSQEDLAVAAGKLAECQKTIASLGRQLKSLATLEDFLIDTANIPGF-SGEALIPRTDG-ELWKFHSNETFIPRSDSDPLKMPRENSGPSVTG-NDEESPASSSSSSSAVSLNHVTSVKVRNGFGKLFSRSKSAIQLENQQG 704    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H0L3 ((Uncharacterized protein {ECO:0000313|EMBL:CCB45485.1}))

HSP 1 Score: 715.687 bits (1846), Expect = 0.000e+0
Identity = 418/732 (57.10%), Postives = 525/732 (71.72%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQH---------------------KLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDP-SSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLF--SRSKSGVQLGNH 708
            MEKR WLWK+KSSEKSPG+T+SSGSISSHSERYS +Q+ LK   N  +QSPEVTSKV  S  EVND +K LTEKLSAAL+NVGAK+DLVKQHAKVAEEA+AGWEKAENEV +LKQQLEAAVQ+NL LE RV+ LDGA+KECVRQLRQA+EEQE++I EA+ +K+ EWE+T++ELES+LLELQ QV   K   P+  DP + H                     +L+++EKEN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A  RKS  +++ +S AASSL +ESL DSQSDNGE++  +D  +++TS  D N  +  CSDSWASALIAELD FK EK  ++NL + S +ID+MDDFLEMERLAALP+ E  +  +ES++V+ QT++ +SSLR          AELE                             TMT R+A LE+KLEK+EAEK+EL  +L  S + ++ SK QL+E E +LE++QKEL+  NESK+ LE QL+ ME E RTMS  VD+L  ++KKE  +SAE+ +KC++LEDEL ++ QE++  QA SS+S+ K+ QE+L +AA KLAECQKTIASLG+QLKSLATLEDFLTD  N+     G+S +  A G E W+LHSN++FLP+R   SS +SAE   P +NG N     S SS S S +S+NH+ S K+  GFG     +RS+SG+QL NH
Sbjct:    1 MEKRKWLWKRKSSEKSPGETESSGSISSHSERYSDDQDGLKSSPNHSTQSPEVTSKVATSGDEVNDNVKSLTEKLSAALLNVGAKDDLVKQHAKVAEEAVAGWEKAENEVVVLKQQLEAAVQENLVLEDRVSRLDGAIKECVRQLRQAREEQEEKISEAVVKKTREWESTKFELESQLLELQTQVDAAKAEPPVPFDPDLCHMLQALEKQNSALKYELLSQSEELQALEKENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKAMARKSSSIHDHRSVAASSLHIESLTDSQSDNGEQLNMVDISLHQTSSFDVNDCEPSCSDSWASALIAELDQFKNEKVVSRNLPASSIEIDLMDDFLEMERLAALPQAEHGSRSLESQAVTNQTSNEDSSLR----------AELE-----------------------------TMTHRMAELEEKLEKMEAEKAELEIALTVSQDCIEASKIQLREAEMKLEEMQKELDFANESKQALESQLIAMEAEARTMSARVDSLEAEIKKEHAMSAEIGVKCQELEDELLKKKQELKFQQAASSNSERKVKQEELAIAAGKLAECQKTIASLGKQLKSLATLEDFLTDAGNLADF-SGKSVISTAAGGETWQLHSNDTFLPRRSADSSNMSAEICGPSINGNNGN---SFSSLSLSASSINHLGSDKTLQGFGNQLPPTRSRSGIQLQNH 689    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RP69 ((Filament-like plant protein {ECO:0000313|EMBL:PSS31811.1}))

HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0
Identity = 406/709 (57.26%), Postives = 495/709 (69.82%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQ 709
            MEKR WLWK+KSSE+SPG+T+SSGS+SSHSERYS +QE LK   N  +QSPEVTSK  V+  E++D +KILTEKLSAALVNV AKEDLVK HAKVAEEA+AGWEKAEN+V++LKQQ EAA+QQ L LE RV+HLDGALKECVRQLRQ +EEQEQ+IHEA+ EK+ EWE+T  EL+ +L + Q Q++ VK   P  IDP +  K ES+EKEN+ LK EL S SEELEIRTIERDLS QAAE ASKQ LESIKKVAKLEAECRRLQA  RKS   N QKS +ASS  VE+L D QSD+GER+  L+ D    S +                       F++EK     +T  S +IDIMDDFLEMERLAALPE E+K+   E  S + Q  + E+ L+ E++    RVAELE+ L++IE                                       AEK EL K+L A  +S + S+ QLK+TE RLE+L+KELNA+NESKEL E+QL+GMEVE RTM+ +V++L ++V+KE  +SAEM +KC++LE+ELTR++QE+EL Q   S+   K+NQEDL VAA KLAECQKTIASLGRQL+SLATLEDFLTDT N+P L  G S +P A   +PWKLHSNE+FLPK   S          LV G N E    +  SSSS  SLNHISS KS++GFGKLFSRSK+G+Q+ N Q
Sbjct:    1 MEKRKWLWKRKSSERSPGETESSGSLSSHSERYSDDQEALKASPNHNTQSPEVTSKTAVNGEEISDSVKILTEKLSAALVNVSAKEDLVKLHAKVAEEAVAGWEKAENDVAVLKQQFEAAIQQKLALEDRVSHLDGALKECVRQLRQGREEQEQKIHEAVVEKTREWESTNVELQRQLFQFQTQLEAVKAEPPTSIDPDLPIKFESLEKENSALKFELLSRSEELEIRTIERDLSAQAAETASKQHLESIKKVAKLEAECRRLQAVARKSSFANGQKSLSASSFYVETLTDCQSDSGERLNALEIDSQNMSRL-----------------------FESEKAITNGITGSSLEIDIMDDFLEMERLAALPEIETKSQCPELVSDANQVVNGENLLKAELEEMSHRVAELEDKLMKIE---------------------------------------AEKGELEKALAAREDSFEASQDQLKQTEMRLEELRKELNAVNESKELFEFQLIGMEVEARTMASKVESLKVEVEKEHRLSAEMAVKCQELENELTRKSQEIELQQTAVSNGKPKINQEDLDVAAVKLAECQKTIASLGRQLQSLATLEDFLTDTANLPGLSGGGSMIPGA--GDPWKLHSNETFLPKNSSS----------LVIG-NAE---KSPPSSSSSVSLNHISSAKSRNGFGKLFSRSKNGIQVENQQ 631    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7WIN4 ((filament-like plant protein isoform X2 {ECO:0000313|RefSeq:XP_009774514.1}))

HSP 1 Score: 696.041 bits (1795), Expect = 0.000e+0
Identity = 400/705 (56.74%), Postives = 509/705 (72.20%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPK--RDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGV 703
            MEKR WLWK+K S+KSPG+T+SSGS+SSHSERYS EQ+ LKE+S+   QSPE+TSK    + E  + ++ LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAE+EV+++KQQL+AAVQQNL LEVRV+HLDGALKECVRQLRQA++EQE+RI EA+ EK NEWE+ +  LE++LL+LQ+QV+  K   P   DP +  +L+ +EKEN  LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKV KLEAECR+LQA  RK+   ++Q+S A SS  VES+ DSQSD+GER+ T+D D  + + ++TN  +  CS+SWASALIAELD FK EK ++K L +CS +ID+MDDFLEMERLAAL E  +KT  + S++V   + + E+ L  E  +  QRVAELE  L +IE                                       AEK+EL  +L    +++ +S   LKE++TRLE+LQKEL+A+NESKELLE+QL GMEVE RTMS  + +L  ++++EQ++S++M  KCR+LE+EL ++ Q+VEL Q   S+ +VK+ QEDL VAADKLAECQKTIASLG+QL+SLATLEDFL DT N+P    G  SV    G E WKLH NE+F PK   DP S++  E  +  +NG   ES  S+S+SS++ A     ++ KSK+GFGKLFSRSKSG+
Sbjct:    1 MEKRKWLWKRKPSDKSPGETESSGSLSSHSERYSDEQDALKEFSDHDKQSPEITSKAATIDDEAKESLRSLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAESEVAVVKQQLDAAVQQNLSLEVRVSHLDGALKECVRQLRQARDEQEKRIQEAVVEK-NEWESEKAALENQLLKLQSQVETCKAETPTSTDPDILVRLDCLEKENTALKIELHSCSEELEIRTIERDLSTQAAESASKQHLESIKKVTKLEAECRKLQATARKASPFSDQRSSAVSSYYVESVTDSQSDSGERLNTVDNDGLKMTKLETNEYEPSCSNSWASALIAELDQFKNEKATHKTLAACSIEIDMMDDFLEMERLAALSETANKTPSITSDAVPHDSPNVENPLAAEYDSISQRVAELEQKLEKIE---------------------------------------AEKAELENALSECQDALKVSSVHLKESQTRLEELQKELDAVNESKELLEFQLFGMEVEARTMSANIGSLKTEIEREQSLSSDMEAKCRELENELQKKDQKVELQQTFGSNGEVKIKQEDLAVAADKLAECQKTIASLGKQLQSLATLEDFLIDTANLP----GGESVVAKAGGELWKLHVNETFTPKCGSDP-SKVEEENASHSMNGNEGESSASSSTSSATQA-----TTAKSKNGFGKLFSRSKSGL 655    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4B9J8 ((filament-like plant protein isoform X2 {ECO:0000313|RefSeq:XP_016485517.1}))

HSP 1 Score: 696.041 bits (1795), Expect = 0.000e+0
Identity = 400/705 (56.74%), Postives = 509/705 (72.20%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPK--RDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGV 703
            MEKR WLWK+K S+KSPG+T+SSGS+SSHSERYS EQ+ LKE+S+   QSPE+TSK    + E  + ++ LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAE+EV+++KQQL+AAVQQNL LEVRV+HLDGALKECVRQLRQA++EQE+RI EA+ EK NEWE+ +  LE++LL+LQ+QV+  K   P   DP +  +L+ +EKEN  LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKV KLEAECR+LQA  RK+   ++Q+S A SS  VES+ DSQSD+GER+ T+D D  + + ++TN  +  CS+SWASALIAELD FK EK ++K L +CS +ID+MDDFLEMERLAAL E  +KT  + S++V   + + E+ L  E  +  QRVAELE  L +IE                                       AEK+EL  +L    +++ +S   LKE++TRLE+LQKEL+A+NESKELLE+QL GMEVE RTMS  + +L  ++++EQ++S++M  KCR+LE+EL ++ Q+VEL Q   S+ +VK+ QEDL VAADKLAECQKTIASLG+QL+SLATLEDFL DT N+P    G  SV    G E WKLH NE+F PK   DP S++  E  +  +NG   ES  S+S+SS++ A     ++ KSK+GFGKLFSRSKSG+
Sbjct:    1 MEKRKWLWKRKPSDKSPGETESSGSLSSHSERYSDEQDALKEFSDHDKQSPEITSKAATIDDEAKESLRSLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAESEVAVVKQQLDAAVQQNLSLEVRVSHLDGALKECVRQLRQARDEQEKRIQEAVVEK-NEWESEKAALENQLLKLQSQVETCKAETPTSTDPDILVRLDCLEKENTALKIELHSCSEELEIRTIERDLSTQAAESASKQHLESIKKVTKLEAECRKLQATARKASPFSDQRSSAVSSYYVESVTDSQSDSGERLNTVDNDGLKMTKLETNEYEPSCSNSWASALIAELDQFKNEKATHKTLAACSIEIDMMDDFLEMERLAALSETANKTPSITSDAVPHDSPNVENPLAAEYDSISQRVAELEQKLEKIE---------------------------------------AEKAELENALSECQDALKVSSVHLKESQTRLEELQKELDAVNESKELLEFQLFGMEVEARTMSANIGSLKTEIEREQSLSSDMEAKCRELENELQKKDQKVELQQTFGSNGEVKIKQEDLAVAADKLAECQKTIASLGKQLQSLATLEDFLIDTANLP----GGESVVAKAGGELWKLHVNETFTPKCGSDP-SKVEEENASHSMNGNEGESSASSSTSSATQA-----TTAKSKNGFGKLFSRSKSGL 655    
BLAST of XM_017393041.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067KCT1 ((Uncharacterized protein {ECO:0000313|EMBL:KDP32803.1}))

HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0
Identity = 395/706 (55.95%), Postives = 515/706 (72.95%), Query Frame = 0
 
Query:    1 MEKRNWLWKKKSSEKSPGDTDSSGSISSHSERYSGEQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRD-PSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQL 705
            MEKR WLWK+KSSE+SPG+T+SSGSISS SER+S EQ+ LK   N  +QSPEVTSK  V + +VND ++ILTEKLSAALVNV AK+DLVKQH+KVAEEA+AGWEKAENEV+ LK+QLEAA+QQN  LE RV+HLDGALKECVRQLRQA+EE E++++EA+T+K+ EWE+ + ELE++LLEL+ + +  K   P  I P + HKLE +EK+NA LK E+ SLSEELE+R IERDLSTQAAE ASKQ L+SIKKVAKLEAECRRL+A   KS  +N+ K+  ASS+ VESL DSQSD+GER+  ++ D ++ S ++ +  +  CSDSWASALIAELD FK EK  N+NL + S +ID+MDDFLEMERLA+LPE ES T + E E V+ Q+ D ESSLR E++    R AELE  L ++E EK  +  +                           KI  E++EL  SL  S E  +  + QL E E +++QL +EL+  NESK+ +E QLV MEVE RTM+ +VD+L  +++KE+ +SAE+ +KCR LE+EL+ + +EVEL ++ SS+ ++K+ QEDL VAA KLAECQKTIASLG+QLKSLATLEDFL DT ++P    G + +P A   EPWKLHS+++  PKRD  SS +++E   P VN  N+     +SSSS+S  S  HI+S K+++GF K FSR+K+G+QL
Sbjct:    1 MEKRKWLWKRKSSERSPGETESSGSISSQSERFSDEQDNLKASPNNETQSPEVTSKTVVRDEDVNDSVRILTEKLSAALVNVSAKDDLVKQHSKVAEEAVAGWEKAENEVAALKKQLEAAIQQNCALEDRVSHLDGALKECVRQLRQAREEHEEKVYEAVTKKTIEWESVKSELENQLLELKTKAEATKSESPPQIVPDLWHKLEYLEKDNASLKLEILSLSEELELRIIERDLSTQAAETASKQHLDSIKKVAKLEAECRRLKAVACKSSSLNDHKTSIASSMYVESLTDSQSDSGERLNAVELDAHKISCLEPSKCEPSCSDSWASALIAELDQFKNEKAVNRNLPASSIEIDLMDDFLEMERLASLPENESGTHQSEPEPVATQSTDVESSLRAELEIMIHRTAELEKQLQKMEGEKVELEEKLE-------------------------KILVERTELEMSLTISREKNEEFQIQLGEAELKMKQLHQELSIANESKQQIESQLVSMEVEARTMASKVDSLEAELEKEKVLSAELAVKCRTLEEELSEKNKEVELQKSASSNGELKIKQEDLAVAAGKLAECQKTIASLGKQLKSLATLEDFLIDTASLPEFTAGGALMPKAT-EEPWKLHSSDTLSPKRDSSSSRIASENSGPSVNK-NEGHSTPSSSSSASSVSSIHINSEKNRNGFAKFFSRNKNGIQL 679    
Match NameStatsDescription
A0A6L5BDS5E-Value: 0.000e+0, PID: 83.31(Uncharacterized protein {ECO:0000313|EMBL:KAF1002... [more]
A0A5B7BWN1E-Value: 0.000e+0, PID: 61.18(Putative Filament-like plant protein isoform 1 {E... [more]
A0A6J1ACV0E-Value: 0.000e+0, PID: 55.45(filament-like plant protein {ECO:0000313|RefSeq:X... [more]
A0A061FP54E-Value: 0.000e+0, PID: 55.05(Filament-like plant protein, putative isoform 1 {... [more]
A0A5J5BB76E-Value: 0.000e+0, PID: 57.37(Uncharacterized protein {ECO:0000313|EMBL:KAA8538... [more]
F6H0L3E-Value: 0.000e+0, PID: 57.10(Uncharacterized protein {ECO:0000313|EMBL:CCB4548... [more]
A0A2R6RP69E-Value: 0.000e+0, PID: 57.26(Filament-like plant protein {ECO:0000313|EMBL:PSS... [more]
A0A1U7WIN4E-Value: 0.000e+0, PID: 56.74(filament-like plant protein isoform X2 {ECO:00003... [more]
A0A1S4B9J8E-Value: 0.000e+0, PID: 56.74(filament-like plant protein isoform X2 {ECO:00003... [more]
A0A067KCT1E-Value: 0.000e+0, PID: 55.95(Uncharacterized protein {ECO:0000313|EMBL:KDP3280... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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