Resource Type:
Polypeptide
Name:
XM_017392291.1
Identifier:
XM_017392291.1-protein
Sequence:
MQFSGFEIAFRRYLTKFQVVEALSVACVDSSAVGVGKLVSKLVCRSLHSN
VAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCI
KRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIP
FKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIAL
EVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVC
ILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLL
SPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIE
DNSTQSAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSL
HMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLF
ALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRK
AGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFN
AFQKQAEKYITSETAATAALLPESVSVESVFMTKIYSPVNLIKKRLVRYG
LINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIV
SDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSE
AQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYS
LHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSID
FGAWR
Sequence Length:
805
Sequence Checksum:
ccb396bcf7409a6097f2a37fd3666a95
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017392291.1, derives from mRNA, XM_017392291.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AKB0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8531080.1}))
HSP 1 Score: 1122.84 bits (2903), Expect = 0.000e+0
Identity = 539/807 (66.79%), Postives = 653/807 (80.92%), Query Frame = 0
Match: A0A5J5AKB0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8531080.1}))
HSP 1 Score: 1122.84 bits (2903), Expect = 0.000e+0
Identity = 539/807 (66.79%), Postives = 653/807 (80.92%), Query Frame = 0
Query: 1 MQFSGFEIAFRRYLTKFQVVEALSVACVDSSA-VGVGKLVSKLVCRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQSAESK-SNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESVSV-ESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAW 804
M F G R L K ++ + + V SS VG+G+ + +L+ S++S + AI++D++ K LAKNLA L+ ESSN +E+KPKTRME+KR EL IK+RVKEQY++GK+ +LM VIANPKTL DAYN IRV+SNVDL L+ D IPF+ MAEELS G F V AN FSIST+G +K VLVLPNLKLK++QEAIRI LEVV+KP+FSK SHGCRSGRGH SALKYI KE+SNPDWWFTLLV+K DVCIL+KLI+TME KIED YAIIRSMFDA VLN+ FGGFPKGHGLPQEG+LSP+L+NIYLDLFD E YR+SMRYE+F G H +Q S S LRSWFRRQI+ N+ Q A + S +R+H CR MDEIF AISG KE A AF EI+S++ NSLH+DV++ ++ PCNG GV+FLGT+++R ++ESPA+R VHKL++K++LFA QK+ESWD+GTVRIGKKW+AHGLKKVKESEIKHLAD S+L+QIS FRK GMETDHWYK+LLKIWMQ +N + S E +LSKYIAEPALP+EL DSF FQK AE+YI+SETA+T ALLP S S ESV +T++ +PVN+IKKRL+RYGL N+ G T H LILQDN QIIDWF G+ SRW RW+SECDN S++KLI+SD VRKSCIRTLAAKYRIHE++IEK FDSELSR+PST+EI + + + +++ N+DE+LMYGI GLC+LSL RMVSQSR C CFV+GC AAAP VYSLH+MERQKFPGW+TGF+TCIHPSLN+RRIGLCKQH++DLYLGHISL SIDFGAW
Sbjct: 1 MWFVGLHGVCRGNLLKCTTLQRMDLVGVYSSVLVGIGRSIERLLGCSVYSTLEAISNDSDKDVGKVTLAKNLANLVEESSNLDEKKPKTRMELKRLLELRIKKRVKEQYMNGKFQDLMAKVIANPKTLLDAYNCIRVNSNVDLALDGDNIPFESMAEELSSGNFHVNANIFSISTKGAEKNVLVLPNLKLKIIQEAIRIVLEVVYKPHFSKISHGCRSGRGHSSALKYICKEISNPDWWFTLLVNKKLDVCILAKLISTMENKIEDPNFYAIIRSMFDAQVLNVEFGGFPKGHGLPQEGVLSPVLINIYLDLFDREFYRISMRYEAFDTGFHAEQDGSHSTLRSWFRRQIKGNNVQDAGGENSGVRVHTCRFMDEIFFAISGSKEVALAFKSEIQSYMQNSLHLDVDDRT-EILPCNGRHGVRFLGTLIRRRVRESPAVRAVHKLKEKIKLFASQKQESWDAGTVRIGKKWLAHGLKKVKESEIKHLADSSSILSQISTFRKGGMETDHWYKLLLKIWMQGMNVRFADSEEFILSKYIAEPALPQELRDSFYEFQKHAEEYISSETASTLALLPTSTSSNESVTVTEVIAPVNIIKKRLLRYGLTNAKGFPHTSHLLILQDNIQIIDWFSGIVSRWLRWYSECDNLSEIKLIISDQVRKSCIRTLAAKYRIHETEIEKLFDSELSRIPSTQEIEQEAASETLDSEGLNHDESLMYGICNSGLCLLSLARMVSQSRPCNCFVVGCMAAAPSVYSLHVMERQKFPGWRTGFSTCIHPSLNKRRIGLCKQHLKDLYLGHISLQSIDFGAW 806
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6YUB0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA35484.1}))
HSP 1 Score: 1088.56 bits (2814), Expect = 0.000e+0
Identity = 530/807 (65.68%), Postives = 651/807 (80.67%), Query Frame = 0
Match: A0A5B6YUB0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA35484.1}))
HSP 1 Score: 1088.56 bits (2814), Expect = 0.000e+0
Identity = 530/807 (65.68%), Postives = 651/807 (80.67%), Query Frame = 0
Query: 1 MQFSGFEIAFRRYLTKFQVVEALSVACVDSSAVGVGKLVSKLVCRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQSAESK-SNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESVSV-ESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAWR 805
M F G + L K ++ ++++ V SS+V +G +L+ S++S + AI++D++ K LAKNLA L+ ESSN +E+KPKTRME+KR FEL IK+RVKEQ+++GK+ +LM VIANPKTL DAYN IRV+SNVDL L+ D IPF+ MAEELS G F V AN FSIST+G KEVLVLPNLKLKVVQEAIRI LEVV+KP+FSK SHGCRSGRGH SALKYI KE+SNPDWWFTLLV K D CIL+KLI+TME KIED YAIIRSMFDA VLN+ FGGFPKGHGLPQEG+LSP+L+NIYLDLFD E+YR+SMRYE+F G +Q S S LRSWFRRQ++ ++ + A + S +R+H CR MDEIF AISG +E A AF EI+S++ N LH+DV++ ++ PCNG GV+FLGT+++R ++ESPA+R VHKL++K+ LFA QK ESWD+GTVRIGKKW+AHGLKKVKESEIKHLAD S+L+QIS FRKAGMETDHWYK+LLKIWMQ +N K S E +LSKYIAEPALP+EL DSF FQK+AE+YI+SETA+T ALLP S S ESV +T++ +PVN+IKKRL+RYGL N+ G T H LILQDN QII+WF G+ SRW RW+SECDN S++KLI+SD VRKSCIRTLAAKYRIHE++IEK+FDSELSR+PST+EI ++ + + +++ +YDE+ MYGI Y GLC+LSL RMVSQSR C CFVMGC A AP VY+L +MERQKFPGW+TGF++CIHPSLN+RRIGLCKQH++ LYLGHISL SIDFGAW+
Sbjct: 1 MWFVGLHGVCKGNLLKCTILRSMNLVGVCSSSV-IGIPFERLLGHSVYSTLEAISNDSDKDVGKITLAKNLASLVEESSNLDEKKPKTRMELKRSFELRIKKRVKEQFMNGKFQDLMKEVIANPKTLLDAYNCIRVNSNVDLALDGDNIPFETMAEELSSGNFHVNANIFSISTKGAKKEVLVLPNLKLKVVQEAIRIVLEVVYKPHFSKISHGCRSGRGHSSALKYICKEISNPDWWFTLLVKKKIDACILAKLISTMENKIEDPNFYAIIRSMFDAQVLNVEFGGFPKGHGLPQEGVLSPVLINIYLDLFDRELYRMSMRYEAFNTGFLAEQDGSHSTLRSWFRRQMKGSNVEDAGGENSGVRVHSCRFMDEIFFAISGSEEVALAFKSEIQSYMQNYLHLDVDDQT-EILPCNGPHGVRFLGTLIRRRVRESPAVRAVHKLKEKLTLFASQKRESWDAGTVRIGKKWLAHGLKKVKESEIKHLADSSSILSQISSFRKAGMETDHWYKLLLKIWMQGMNVKFADSEEFILSKYIAEPALPQELRDSFYEFQKRAEEYISSETASTLALLPTSTSSNESVTITEVIAPVNIIKKRLLRYGLTNAKGFPHTSHFLILQDNIQIIEWFSGIVSRWLRWYSECDNLSEIKLIISDQVRKSCIRTLAAKYRIHETEIEKRFDSELSRIPSTQEIEQEVASETLDSEALDYDESSMYGICYSGLCLLSLARMVSQSRPCNCFVMGCMAVAPSVYTLLVMERQKFPGWRTGFSSCIHPSLNKRRIGLCKQHLKGLYLGHISLQSIDFGAWK 805
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RDJ7 ((DNA endonuclease {ECO:0000313|EMBL:PSS26621.1}))
HSP 1 Score: 1055.43 bits (2728), Expect = 0.000e+0
Identity = 523/811 (64.49%), Postives = 639/811 (78.79%), Query Frame = 0
Match: A0A2R6RDJ7 ((DNA endonuclease {ECO:0000313|EMBL:PSS26621.1}))
HSP 1 Score: 1055.43 bits (2728), Expect = 0.000e+0
Identity = 523/811 (64.49%), Postives = 639/811 (78.79%), Query Frame = 0
Query: 1 MQFSGFEIAFRRYLTKFQVVEALSVACVDSSAVGVGKLVSK--LVCRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHR-SDSKLRSWFRRQIEDNSTQ-SAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESVS---VESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAW 804
M F+ F R K+ +++ ++ +SS+V + + + + C S S VA +D ++ V K LAK+LA L+ ESS +ERKPKTR+E+KR EL IK+RVKEQY++GK+ LM V+ANPKTL DAY+ IRV+SNVDL E D IPF+ +AEELS G FDVGAN FSISTRG KEVLVLPN+KLKVVQEAIRI LEVV+KP+FSK SHG R GRGH+SALKYI KE+SNPDWWFTLL++K D CIL KLI+TME +IED LY +IRSMFDA VLNL FGGFPKGHGLPQEG+LSPILMNIYLDLFD E+YR+SM+YE+ G H +Q S SKLRSWFRRQ++ N+ + + SN+RIHCCR MDEIF AISG ++ A AF EI+S+L +SLH+ V+N ++ PCNG V+FLGT+V RS++ESPA+R VHKL++KV+LFA QK+ESWD+GTVRIGKKW+AHGLKKVKESEIKHLAD S+L+QIS +RKAGMETDHWYKVLLK+WMQDVNAK S E +LS+YIAEPALP+EL DSF FQK+AE+YI+SETA+T A LP S S ESV T+I +PV +I++RL+RYGL N+ G T LILQD+ QIIDWF G+ SRW RW+S C NF ++KL++ +RKSCIRTLAAKYRI E+ IEKQFDSELSR+PST+E+ ++ N + ++Q YD+ LMYGISY G C+LSL RMVSQSR C CFV+GC AAAPCVY+L +MERQK PGWKTGF++CIHPSLNRRRIGLCKQH++DLYLG ISL SIDFGAW
Sbjct: 1 MWFAAFGSVCARKWMKWSILQRMNHVVFNSSSVVIIRRPMEWFVPCSSYSSQVAVSSDSDKDV-RKVTLAKDLACLVDESSKLDERKPKTRVELKRLLELRIKKRVKEQYINGKFQALMHKVVANPKTLQDAYDCIRVNSNVDLASERDCIPFESLAEELSCGNFDVGANVFSISTRGAQKEVLVLPNVKLKVVQEAIRIGLEVVYKPHFSKISHGSRIGRGHISALKYICKEISNPDWWFTLLINKKLDSCILDKLISTMEVRIEDPNLYTLIRSMFDAQVLNLEFGGFPKGHGLPQEGVLSPILMNIYLDLFDRELYRMSMKYETLDMGFHNEQEDGSHSKLRSWFRRQMKGNNIEDNCVENSNVRIHCCRFMDEIFFAISGSRDLAFAFKSEIQSYLEDSLHLGVDNP-EEILPCNGPHAVRFLGTLVTRSVRESPAVRAVHKLKEKVKLFASQKQESWDAGTVRIGKKWLAHGLKKVKESEIKHLADSNSLLSQISSYRKAGMETDHWYKVLLKVWMQDVNAKFANSDEFILSRYIAEPALPQELRDSFYEFQKRAEQYISSETASTIAFLPSSRSSSYTESVTTTEIIAPVKIIEQRLLRYGLTNAKGIPCTSRMLILQDSIQIIDWFTGIVSRWLRWYSLCQNFGEIKLVICSQLRKSCIRTLAAKYRIDETVIEKQFDSELSRIPSTQELELEVPNETLDSQASEYDDGLMYGISYSGSCLLSLARMVSQSRPCNCFVIGCMAAAPCVYTLLVMERQKPPGWKTGFSSCIHPSLNRRRIGLCKQHLQDLYLGRISLQSIDFGAW 809
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7HW71 ((Uncharacterized protein {ECO:0000313|EMBL:TXG60392.1}))
HSP 1 Score: 1055.43 bits (2728), Expect = 0.000e+0
Identity = 503/786 (63.99%), Postives = 629/786 (80.03%), Query Frame = 0
Match: A0A5C7HW71 ((Uncharacterized protein {ECO:0000313|EMBL:TXG60392.1}))
HSP 1 Score: 1055.43 bits (2728), Expect = 0.000e+0
Identity = 503/786 (63.99%), Postives = 629/786 (80.03%), Query Frame = 0
Query: 29 DSSAVGVGKLVSKLVCRSL-------HSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNS-TQSAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESV-SVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAWR 805
+ + V V L LV R + +S +AA +D N+ K LAKNLA+L+ ES+N +E +PK+RME KR EL IK+RVKEQYV+GK+ NLM VIA+P+TL D+YNSIR++SNVD+ + D++ F MAEEL GKFDV ANTFSIST+G KEV+VLPNLKLKVVQEAIRI LE+V++P+FSK SHGCRSGRGH +ALKYI KE+SNPDWWFTLL+++ D C+L+ +I+ ME KIED +LY II+ MFDA VL+L FGGFPKGHGLPQEG+LSPILMNIYLDLFD E YRLSMRYE+ H S SKLRSWFRRQ++DN E + R+HCCR MDE+F A+SG KEAA AF ++ ++L N LH++V+N D+ PC G G+ FLGT+++RS+KES A+++VHKL+DKV+LFAL K+E+W++GT RIGKKW+AHGLKKVKESEIK+LAD S L+QIS FRKAGM+TDHWYK+LL +WMQDV AK+ +S E +LSKY+AEPALP+EL +SF FQK+AE+Y++SETAAT ALLP S S +SV +T+I +PVN IKKRL+RYGL S G+ RT LILQD+ QIIDWF G+ RW RW+SEC NFS++KLI+S+ VRKSCIRTLAAKYRIHE++IEK+FD ELSR+PST+EI +++ +S++Q + DE L+YGISY GLC+LSL R+ SQSR C CFVMGC+AAAP VY+LH+MERQKFPGWKTGF++CIHPSLN+RRIGLCKQH+ +LYLGHISL SIDFGAW+
Sbjct: 22 NENPVPVHSLFKTLVGRPVERRQAFSYSTLAADDDVNDKGTRKMTLAKNLAFLVEESTNLDEERPKSRMEFKRSLELRIKKRVKEQYVNGKFQNLMAKVIAHPETLQDSYNSIRLNSNVDITVNDDSVSFATMAEELYSGKFDVNANTFSISTKGARKEVIVLPNLKLKVVQEAIRIILELVYRPHFSKISHGCRSGRGHSTALKYISKEISNPDWWFTLLLNQKLDSCVLANMISAMEDKIEDPSLYGIIQGMFDAQVLHLEFGGFPKGHGLPQEGVLSPILMNIYLDLFDREFYRLSMRYEALSPDFHIGGDGSHSKLRSWFRRQLKDNDLNHRVEENISTRLHCCRFMDEMFFAVSGTKEAALAFKSDVVNYLQNVLHLNVDNQT-DILPCVGPHGICFLGTLIRRSVKESSAVKSVHKLKDKVKLFALDKQEAWNAGTFRIGKKWLAHGLKKVKESEIKNLADSNSTLSQISSFRKAGMQTDHWYKLLLNVWMQDVKAKAVLSEEFLLSKYVAEPALPQELRESFYEFQKRAEEYVSSETAATLALLPNSCSSAKSVTITEIVAPVNDIKKRLLRYGLTTSEGYPRTSSLLILQDSIQIIDWFSGIVRRWLRWYSECKNFSEIKLIISNEVRKSCIRTLAAKYRIHENEIEKRFDVELSRIPSTQEIEHEMAYETSDSQAFDNDEGLLYGISYSGLCLLSLARVASQSRPCNCFVMGCSAAAPGVYTLHVMERQKFPGWKTGFSSCIHPSLNKRRIGLCKQHLENLYLGHISLQSIDFGAWK 806
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EXW7 ((Intron maturase, type II family protein {ECO:0000313|EMBL:GFY91294.1}))
HSP 1 Score: 1049.65 bits (2713), Expect = 0.000e+0
Identity = 516/766 (67.36%), Postives = 621/766 (81.07%), Query Frame = 0
Match: A0A7J0EXW7 ((Intron maturase, type II family protein {ECO:0000313|EMBL:GFY91294.1}))
HSP 1 Score: 1049.65 bits (2713), Expect = 0.000e+0
Identity = 516/766 (67.36%), Postives = 621/766 (81.07%), Query Frame = 0
Query: 44 CRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHR-SDSKLRSWFRRQIEDNSTQ-SAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLP---ESVSVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAW 804
C S S VA +D ++ V K+ LAK+LA L+ ESS +ERKPKTR+E+KR EL IK+RVKEQY++GK+ +LM V+ANPKTL DAY+ IRV+SNVDL E D IPF+ +AEELS G FDVGAN FSISTRG KEVLVLPN+KLKVVQEAIRI LEVV+KP+FSK SHG R GRGH+SALKYI KE+SNPDWWFTLL++K D CIL KLI+TME +IED LYA+IRSMFDA VLNL FGGFPKGHGLPQEG+LSPILMNIYLDLFD E+YR+SM+YE+ G H +Q S SKLRSWFRRQ++ N+ + + SN+RIHCCR MDEIF AISG ++ A AF EI+S+L +SLH+ V+N ++ PCNG V+FLGT+V RS++ESPA+R VHKL++KV+LFA QK+ESWD+GTVRIGKKW+AHGLKKVKESEIKHLAD S+L+QIS +RKAGMETDHWYKVLLK+WMQDVNAK S E +LS+YIAEPALP+EL DSF FQK+AE+YI+SETA+T A LP S ESV T+I +PV +I++RL+RYGL N+ G T LILQD+ QIIDWF G+ SRW RW+S+C NF ++KL++ VRKSCIRTLAAKYRI E+ IEKQFDSELSR+PST+E+ ++ N + ++Q YD+ LMYGISY G C+LSL RMVSQSR C CFV+GC AAAPCVY+L +MERQK PGWKTGF++CIHPSLNRRRIGLCKQH++DLYLG ISL SIDFGAW
Sbjct: 7 CSSYSSQVAVSSDSDKDV-RKATLAKDLACLVDESSKLDERKPKTRVELKRLLELRIKKRVKEQYINGKFQDLMHKVVANPKTLQDAYDCIRVNSNVDLASERDCIPFESLAEELSCGNFDVGANVFSISTRGAQKEVLVLPNVKLKVVQEAIRIGLEVVYKPHFSKISHGSRIGRGHISALKYICKEISNPDWWFTLLINKKLDSCILDKLISTMEVRIEDPNLYALIRSMFDAQVLNLEFGGFPKGHGLPQEGVLSPILMNIYLDLFDRELYRMSMKYETLDMGFHNEQEDGSHSKLRSWFRRQMKGNNIEDNCVENSNIRIHCCRFMDEIFFAISGSRDLAFAFKSEIQSYLEDSLHLGVDNP-EEILPCNGPHAVRFLGTLVTRSVRESPAVRAVHKLKEKVKLFASQKQESWDAGTVRIGKKWLAHGLKKVKESEIKHLADSNSLLSQISGYRKAGMETDHWYKVLLKVWMQDVNAKFANSDEFILSRYIAEPALPQELRDSFYEFQKRAEQYISSETASTIAFLPSSSSSSYTESVTTTEIIAPVKIIEQRLLRYGLTNAKGIPCTSRMLILQDSIQIIDWFTGIVSRWLRWYSQCQNFGEIKLVICSQVRKSCIRTLAAKYRIDETVIEKQFDSELSRIPSTQELELEVPNETLDSQASEYDDGLMYGISYSGSCLLSLARMVSQSRPCNCFVIGCMAAAPCVYTLLVMERQKPPGWKTGFSSCIHPSLNRRRIGLCKQHLQDLYLGRISLQSIDFGAW 770
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4F7E7 ((nuclear intron maturase 4, mitochondrial {ECO:0000313|RefSeq:XP_018827568.1, ECO:0000313|RefSeq:XP_018827569.1}))
HSP 1 Score: 1044.65 bits (2700), Expect = 0.000e+0
Identity = 496/759 (65.35%), Postives = 609/759 (80.24%), Query Frame = 0
Match: A0A2I4F7E7 ((nuclear intron maturase 4, mitochondrial {ECO:0000313|RefSeq:XP_018827568.1, ECO:0000313|RefSeq:XP_018827569.1}))
HSP 1 Score: 1044.65 bits (2700), Expect = 0.000e+0
Identity = 496/759 (65.35%), Postives = 609/759 (80.24%), Query Frame = 0
Query: 48 HSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQ-SAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPE-SVSVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAW 804
+S+ A+NDD+ A K LA NLA ++ ESS +ERKPK+RME+KR+ EL IK+RVKEQY+DGK+ +LM VIANP TL DAYN IR++SNVD+ + D F MAEEL G FDV NTFSIST+G +KE LVLP L+LK+VQEAIRI LEV++KPYFSK SHGCRSGRGH SALKYI KE+SNPDWWFT+ ++K D C+L+KLI+ ME KIED +LYAII SMFDA VLNL FGGFPKGHGLPQEG+LS IL+NIYLDLFD E YRLSM+YE+ H ++ S S LRSWFRRQ++DN +E+ +R+H CR MDEIF AISG +E A +F EI ++L NSLH+D++N ++ PC G + ++FLG +V+RS+KESPA++ VHKL++KV LFALQK+E+WD+GT+RIGKKW+ HGLKKVKESEIKHLAD SVL QISH RKAGMETDHWYK LLKIWMQD AK+ S E +LSKY+AEP+LP+EL DSF FQ+ AE+Y+++ETA+T AL+P S S +S T+I +PVN IKKRL+RYGL ++G+ RT LILQDN QIIDWF G+ RW RW+SECDN ++VKL++SD +RKSCIRTLAAKYRIHE++IEK+FDSELSR+PST+EI ++ S Q + DEALMYGISY GLC+LSL RMV++SR C CFVMGC + AP VY+LH+MERQKFPGWKTGF++CIHPSLNRRRIGLCKQH++DLYLG+ISL SIDFGAW
Sbjct: 49 YSSATAVNDDSNKGAGKMTLAMNLACVVEESSCVDERKPKSRMELKRYCELRIKKRVKEQYMDGKFQDLMTKVIANPDTLQDAYNCIRLNSNVDISINNDRFDFSSMAEELCSGSFDVKVNTFSISTKGANKETLVLPTLRLKIVQEAIRIILEVIYKPYFSKISHGCRSGRGHSSALKYISKEISNPDWWFTVHINKKLDACVLAKLISIMEGKIEDPSLYAIIHSMFDAQVLNLEFGGFPKGHGLPQEGVLSAILINIYLDLFDREFYRLSMKYEALDPSIHSNRDGSYSMLRSWFRRQLKDNDLNCQSENNIGIRVHSCRFMDEIFFAISGSEEVALSFKSEILNYLRNSLHLDIDNQ-TELLPCEGPQEIRFLGYLVRRSIKESPAVKAVHKLKEKVELFALQKQEAWDAGTIRIGKKWLGHGLKKVKESEIKHLADSNSVLGQISHLRKAGMETDHWYKHLLKIWMQDAKAKAAKSEEIILSKYVAEPSLPQELKDSFYEFQRCAEEYVSAETASTLALMPNYSSSCDSETTTEIIAPVNAIKKRLLRYGLATNDGYPRTTTLLILQDNIQIIDWFSGVVRRWLRWWSECDNVNEVKLLISDQLRKSCIRTLAAKYRIHENEIEKRFDSELSRIPSTQEIEQEMAYEKSNNQVFDNDEALMYGISYSGLCLLSLARMVTESRPCNCFVMGCPSPAPSVYTLHVMERQKFPGWKTGFSSCIHPSLNRRRIGLCKQHLKDLYLGNISLQSIDFGAW 806
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6QI75 ((Uncharacterized protein {ECO:0000313|EMBL:KAE7998349.1}))
HSP 1 Score: 1044.65 bits (2700), Expect = 0.000e+0
Identity = 498/807 (61.71%), Postives = 633/807 (78.44%), Query Frame = 0
Match: A0A5N6QI75 ((Uncharacterized protein {ECO:0000313|EMBL:KAE7998349.1}))
HSP 1 Score: 1044.65 bits (2700), Expect = 0.000e+0
Identity = 498/807 (61.71%), Postives = 633/807 (78.44%), Query Frame = 0
Query: 1 MQFSGFEIAFRRYLTKFQVVEALSVA-CVDSSAVGVGKLVSKLVCRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQSAESKS-NMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESVSVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAWR 805
M+ G + L K +++++++ + S + +GK ++L R+ +S+ A + + K LAKNLA L+ ESS +ERKP++RME+KR+FEL IK++VKEQY++GK+ +LM VIANP TL DAYN IR++SNVD+ L D F+ MAEEL G FDV ANTF +ST+G KE LVLPNLKLK+VQEAIRI LEVV+KP+F K SHGCRSGRGH +ALKYIRKE+ NPDWWFT +++ D C+L K+I TME KIED +LYAIIRSMFDAHVLNL FGGFPKGHGLPQEG+LSPIL+NIYLDLFD E YRLSM+YE+ G +Q S SKLR+WFRRQ + N K+ ++R+H CR MDEIF A+SG KE A +F +I ++L NSL +D++N V P G +G++FLG +V++S++ESPA++ VHKL++KV LFALQK+E+W++GT+RIGKKW+ HGLKKVKESEIKHLAD SVL+QIS FRKAGMETDHWYK+LLKIWMQDV AK+ S E +LSKY+AEP+LP+EL DSF FQ++ E+Y++SETA+T ALLP S +S +T+I +PV++IKKRL+RYGL G+ RT L+LQDN+QII WF GL RW RW S+CDNF VKL++SD VRKSCIRTLAAKYRIHE++IEK+FDS+LSR+PST+EI ++ N +S+ Q + DEALMYGISY GLC+LSL R+V+QSR C CFVMGC + AP VY+LH+MERQKFPGWKTGF++CIHPSLN+RRIGLCKQH++DLYLGHI+L SIDFGAW+
Sbjct: 1 MRLLGLSSVCKANLLKRAILQSVNLTRFISSLSTNIGKSAARLHSRTYYSSAAETYVNTDKGTGKRTLAKNLACLVEESSCVDERKPRSRMELKRYFELRIKKKVKEQYMNGKFQDLMAKVIANPDTLQDAYNCIRLNSNVDISLNNDRASFESMAEELCCGSFDVIANTFCVSTKGARKETLVLPNLKLKIVQEAIRIVLEVVYKPHFCKISHGCRSGRGHSTALKYIRKEICNPDWWFTFYINRKLDACVLDKIIATMEDKIEDPSLYAIIRSMFDAHVLNLEFGGFPKGHGLPQEGVLSPILINIYLDLFDHEFYRLSMKYEALDPGFLSNQDGSHSKLRTWFRRQRKGNDLNCKNEKNVSIRVHSCRFMDEIFCAVSGSKEVALSFESDILNYLQNSLLLDIDNQ-TGVLPNEGPQGIRFLGYLVRKSVRESPAMKAVHKLKEKVNLFALQKQEAWNAGTIRIGKKWLGHGLKKVKESEIKHLADCNSVLSQISCFRKAGMETDHWYKLLLKIWMQDVKAKAAKSEEIILSKYVAEPSLPQELTDSFYEFQRRTEEYVSSETASTLALLPNLSSKKSDSVTEIIAPVDVIKKRLLRYGLATYEGYPRTTSLLVLQDNDQIISWFSGLVRRWLRWCSQCDNFGDVKLLISDQVRKSCIRTLAAKYRIHENEIEKRFDSQLSRIPSTQEIEQEMENETSDTQSFDNDEALMYGISYSGLCLLSLARVVTQSRPCNCFVMGCPSPAPSVYTLHVMERQKFPGWKTGFSSCIHPSLNKRRIGLCKQHLKDLYLGHIALQSIDFGAWK 806
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A1VCS5 ((Group II intron-encoded protein LtrA {ECO:0000313|EMBL:KAB1210553.1}))
HSP 1 Score: 1042.34 bits (2694), Expect = 0.000e+0
Identity = 503/787 (63.91%), Postives = 620/787 (78.78%), Query Frame = 0
Match: A0A6A1VCS5 ((Group II intron-encoded protein LtrA {ECO:0000313|EMBL:KAB1210553.1}))
HSP 1 Score: 1042.34 bits (2694), Expect = 0.000e+0
Identity = 503/787 (63.91%), Postives = 620/787 (78.78%), Query Frame = 0
Query: 21 EALSVACVDSSAVGVGKLVSKLV-CRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQ-SAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESVSVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAWR 805
++++V ++ + GK +L+ C + S AA + N+ V K LA+NLA L+ ESS +ER+PK+RME+KR FEL IK+RVKEQY DGK+ +LM VIANP TL DAYN IR++SNV L L D F +AEEL G FDV AN+ SIST+G KE LVLPNLKLKVVQEAIRIALEVV+KP+FSK SHGCRSGRGH SAL+YI KE+S PDWWFT ++K D C+L+KLI+ ME KIED LYA IRSMFDA VLNL FGGFPKGHGLPQEG+LSPIL+NIYLDLFD E YRLSM+YE+ G H DQ R S LRSWFRRQ++ N+ +E + ++R+H CR MDEIF A+SG KE A +F EI +L +SL++DVNN +V PC G +G++FLG +V+RS++ESPAI+ VHKL++K+ LFALQK+E+WD+GT RIGKKW+ HGL+KVKESEIKHLAD SVLNQ S FRK GMETDHWYK+LLKIWMQDV AK+ S E +LSKY+AEP+LP+EL DSF FQ+ A++Y++SETA+T ALLP S + +T+I +PVN IKKRL+RYGL S G+ RT LILQD+ QIIDWF G+ RW RW+SEC+NFS+VK ++SD +RKSCIRTLAAKYRIHE++IEKQFDSELS +PST+E+ ++ N S++Q DEALMYGIS GLC+LSL RMV+QSR C CFVMGC + AP VY+LH+MERQKFPGWKTGF++CIHPSLN+RRIGLCKQH++DLYLG+ISL SIDFGAW+
Sbjct: 76 DSMTVEVTEAKSEYPGKSAERLLYCPAFSSAAAAKDGANKGVG-KMNLAENLACLVEESSFVDEREPKSRMELKRSFELHIKKRVKEQYTDGKFLDLMAKVIANPDTLQDAYNCIRLNSNVHLSLNDDRTSFSSVAEELCGGSFDVAANSVSISTKGTTKETLVLPNLKLKVVQEAIRIALEVVYKPHFSKISHGCRSGRGHSSALRYISKEISYPDWWFTFHINKKLDACVLAKLISIMEDKIEDPGLYAFIRSMFDAQVLNLEFGGFPKGHGLPQEGVLSPILINIYLDLFDREFYRLSMKYEALDPGFHTDQDRPYSSLRSWFRRQLKGNTLSCRSEKEVSIRVHSCRFMDEIFFAVSGSKEVALSFKSEILCYLQDSLYLDVNNQ-PEVSPCEGPQGIRFLGYLVRRSVRESPAIKAVHKLKEKIELFALQKQEAWDAGTTRIGKKWLGHGLRKVKESEIKHLADSNSVLNQGS-FRKVGMETDHWYKLLLKIWMQDVKAKAAKSEEIILSKYVAEPSLPKELRDSFYEFQRHAKEYVSSETASTLALLPNFSSSKPDTITEIIAPVNAIKKRLLRYGLATSEGYPRTTSLLILQDSIQIIDWFSGVVRRWLRWYSECNNFSEVKFLISDQLRKSCIRTLAAKYRIHENEIEKQFDSELSGIPSTQEMEQEMANEKSDSQANENDEALMYGISCSGLCLLSLARMVTQSRPCTCFVMGCPSPAPSVYTLHVMERQKFPGWKTGFSSCIHPSLNQRRIGLCKQHLKDLYLGYISLQSIDFGAWK 859
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2MSG6 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL10p043434:mrna}))
HSP 1 Score: 1041.57 bits (2692), Expect = 0.000e+0
Identity = 508/789 (64.39%), Postives = 630/789 (79.85%), Query Frame = 0
Match: A0A7N2MSG6 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL10p043434:mrna}))
HSP 1 Score: 1041.57 bits (2692), Expect = 0.000e+0
Identity = 508/789 (64.39%), Postives = 630/789 (79.85%), Query Frame = 0
Query: 19 VVEALSVACVDSS-AVGVGKLVSKLVCRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQ-SAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESVSVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAWR 805
++++++VA V SS + +GK +L +S+ A N D + K LA+ LA L+ ESS NERKPK+RME+KR FEL IK+RVKEQY++ K+ +LM VIANP+TL DAYN IR++SNVD L+ D PF+ +AEEL G FDV ANTFSIST+G KE LVLPNLKLKVVQEAIRI LEVV+KP+FSK SHGCRSGRGH SALKYI KE+S DWWFTL ++K D CIL+KL + ME KIED +L+AII SMFD+ VLNL FGGFPKGHGLPQEG+LSPIL+NIYLDLFD E YRLSM+YE+ H DQ S SKLRSWFRRQ++ N +E ++R+HCCR MDEIF A+SG K+ A F EI ++L NSLH+DV+N ++ PC G +G++FLG +V+R ++ESPA++ +HKL++KV LF+LQKEE+W++GTVRIGKKW+ HGLKKVKESEIKHLAD SVL+Q+S FRKAGMETDHWYK+LLKIWMQDV AK+ S E +LSKY+AEP+LP+EL DSF FQ++A++Y++SET++T ALLP S S +S +T+I +PVN IKKRL+RYGL G+ART LILQDN QIIDWF G+ RW RW+ ECDNFS+VKL++SD +RKSCIRTLAAKYRI+E+ IEK+FDSELSR+PSTEEI ++ N +S+ Q + D+ALMYGISY GL +LSL R+VS+SR C CFVMGC + APCVY+LH+MERQKFPGWKTGF++CIHPSLNRRRIGLCKQH++DLYLG ISL SIDFGAW+
Sbjct: 15 ILQSMNVAEVISSFSTIIGKSAGRLQSCVEYSSSTAANKDTDREIGKMTLAEKLACLVEESSCVNERKPKSRMELKRSFELRIKKRVKEQYMNQKFQDLMAKVIANPETLQDAYNCIRLNSNVDTSLDYDRTPFESIAEELCSGSFDVNANTFSISTKGARKETLVLPNLKLKVVQEAIRIVLEVVYKPHFSKISHGCRSGRGHSSALKYISKEISRTDWWFTLCINKKLDACILAKLKSIMEDKIEDPSLHAIIWSMFDSQVLNLEFGGFPKGHGLPQEGVLSPILINIYLDLFDREFYRLSMKYEALNPCFHTDQDESYSKLRSWFRRQLKGNDLNCKSEENVSLRVHCCRFMDEIFFAVSGSKDVALGFKSEILNYLQNSLHLDVDNE-TEILPCEGPQGIRFLGYLVRRRVRESPAVKAIHKLKEKVELFSLQKEEAWNAGTVRIGKKWLGHGLKKVKESEIKHLADSKSVLSQVSCFRKAGMETDHWYKLLLKIWMQDVRAKAAKSEEIILSKYVAEPSLPQELKDSFYEFQRRAKEYVSSETSSTLALLPNSSSNKSDTITEIIAPVNAIKKRLLRYGLATYEGYARTTSLLILQDNTQIIDWFSGIVCRWLRWYCECDNFSEVKLLISDQLRKSCIRTLAAKYRIYENDIEKRFDSELSRIPSTEEIEQEMANETSDTQAFDNDKALMYGISYSGLSLLSLARVVSESRPCNCFVMGCPSPAPCVYTLHVMERQKFPGWKTGFSSCIHPSLNRRRIGLCKQHLKDLYLGQISLQSIDFGAWK 802
BLAST of XM_017392291.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4L213 ((Uncharacterized protein {ECO:0000313|EMBL:KAE9449811.1}) (Fragment))
HSP 1 Score: 1039.25 bits (2686), Expect = 0.000e+0
Identity = 503/772 (65.16%), Postives = 612/772 (79.27%), Query Frame = 0
Match: A0A6A4L213 ((Uncharacterized protein {ECO:0000313|EMBL:KAE9449811.1}) (Fragment))
HSP 1 Score: 1039.25 bits (2686), Expect = 0.000e+0
Identity = 503/772 (65.16%), Postives = 612/772 (79.27%), Query Frame = 0
Query: 36 GKLVSKLVCRSLHSNVAAINDDNESVASKSALAKNLAYLLAESSNRNERKPKTRMEMKRHFELCIKRRVKEQYVDGKYHNLMVNVIANPKTLFDAYNSIRVSSNVDLELECDTIPFKEMAEELSRGKFDVGANTFSISTRGPDKEVLVLPNLKLKVVQEAIRIALEVVFKPYFSKTSHGCRSGRGHLSALKYIRKEVSNPDWWFTLLVHKHFDVCILSKLITTMETKIEDSTLYAIIRSMFDAHVLNLNFGGFPKGHGLPQEGLLSPILMNIYLDLFDSEVYRLSMRYESFCAGTHCDQHRSDSKLRSWFRRQIEDNSTQ-SAESKSNMRIHCCRVMDEIFIAISGPKEAASAFMFEIKSFLHNSLHMDVNNNCMDVYPCNGTRGVQFLGTMVKRSMKESPAIRTVHKLRDKVRLFALQKEESWDSGTVRIGKKWVAHGLKKVKESEIKHLADPCSVLNQISHFRKAGMETDHWYKVLLKIWMQDVNAKSEVSVESVLSKYIAEPALPRELVDSFNAFQKQAEKYITSETAATAALLPESV-SVESVFMTKIYSPVNLIKKRLVRYGLINSNGHARTCHALILQDNEQIIDWFCGLASRWDRWFSECDNFSKVKLIVSDLVRKSCIRTLAAKYRIHESQIEKQFDSELSRLPSTEEIGNDILNGSSEAQQPNYDEALMYGISYGGLCVLSLTRMVSQSRTCCCFVMGCTAAAPCVYSLHIMERQKFPGWKTGFATCIHPSLNRRRIGLCKQHVRDLYLGHISLSSIDFGAWR 805
G+ V S S + A + + K+ LAK+LA+L+ ESSN +E KPKTR+E+KR EL IK+RVKEQY+DGK+ +LM V+ANP+TL DAY+SIRV+SNVDL L D IPF+ +AEELS G F+V ANTFSIST+G +EVLVLPN+KLKVVQEAIRI LEVV++P+FSK SHGCRSGRGHLSALKYI KE+SNPDWWFTLL+ K D +L KLI+TME KIED +L+AII+SMFD VLNL FGGFPKGHGLPQEG+LSPILMN+YLDLFD E YR+SM+YE+ G +Q S SKLRSWFRRQ++D + S +R+HCCR MDE+F A+SG ++ A AF E++++L SL + V+ ++ PCN + G++FLGT+V RS+KE PA+R VHKL++KV+LFA QK ESWD+GT+RIGKKW+AHGLKKVKESEIKHLAD S+L+QIS FRKAGMETDHWYK+LLK+WMQD NAK S E +LSK IAEP+LP+EL DSF FQK AE+YI+SETA+ ALLP+S S ESV MT+I +PVN IKKRL+RYGLINS G T LILQD+ QI+DWF GL RW RW+ EC NF+ VKLI+ D VRKSCIRTLAAKYRIHE++IE +FDSELSR+PST E+ +++ N S++Q MYGISY GLC+LSL RMVSQSR C CFVMGC A APCVY++H+MERQK+PGWKTGF +CIHPSLNRRRIGLCKQH++D+YLG ISL SIDFGAW+
Sbjct: 46 GRAVEGFPTHSTFSTLEAFSSVTDKDVGKATLAKDLAFLVDESSNLDETKPKTRVELKRLLELRIKKRVKEQYIDGKFQDLMYKVVANPETLRDAYDSIRVNSNVDLALGGDCIPFEALAEELSCGYFNVNANTFSISTKGAQREVLVLPNVKLKVVQEAIRIVLEVVYRPHFSKISHGCRSGRGHLSALKYISKEISNPDWWFTLLISKKLDTYVLDKLISTMEVKIEDPSLFAIIKSMFDYQVLNLEFGGFPKGHGLPQEGVLSPILMNLYLDLFDREFYRISMKYETLDMGFDNEQDGSHSKLRSWFRRQMKDIIIEHDGVETSRIRVHCCRFMDEMFFAVSGSEDVALAFKSEMQTYLEGSLLLGVDKQA-EILPCNDSHGMRFLGTLVTRSVKECPAVRAVHKLKEKVQLFASQKLESWDAGTLRIGKKWLAHGLKKVKESEIKHLADNESLLSQISTFRKAGMETDHWYKLLLKVWMQDANAKFIDSEEFILSKCIAEPSLPQELRDSFYEFQKHAEEYISSETASLIALLPDSCSSTESVTMTEIIAPVNSIKKRLLRYGLINSKGFPCTSRMLILQDSNQIVDWFQGLVLRWFRWYGECQNFNDVKLIICDEVRKSCIRTLAAKYRIHETEIEMKFDSELSRIPSTPELEHELANEKSDSQASE----CMYGISYSGLCLLSLARMVSQSRPCNCFVMGCMAVAPCVYTIHVMERQKYPGWKTGFPSCIHPSLNRRRIGLCKQHLKDMYLGSISLQSIDFGAWK 812
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5AKB0 | E-Value: 0.000e+0, PID: 66.79 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8531... [more] |
| A0A5B6YUB0 | E-Value: 0.000e+0, PID: 65.68 | (Uncharacterized protein {ECO:0000313|EMBL:MPA3548... [more] |
| A0A2R6RDJ7 | E-Value: 0.000e+0, PID: 64.49 | (DNA endonuclease {ECO:0000313|EMBL:PSS26621.1})[more] |
| A0A5C7HW71 | E-Value: 0.000e+0, PID: 63.99 | (Uncharacterized protein {ECO:0000313|EMBL:TXG6039... [more] |
| A0A7J0EXW7 | E-Value: 0.000e+0, PID: 67.36 | (Intron maturase, type II family protein {ECO:0000... [more] |
| A0A2I4F7E7 | E-Value: 0.000e+0, PID: 65.35 | (nuclear intron maturase 4, mitochondrial {ECO:000... [more] |
| A0A5N6QI75 | E-Value: 0.000e+0, PID: 61.71 | (Uncharacterized protein {ECO:0000313|EMBL:KAE7998... [more] |
| A0A6A1VCS5 | E-Value: 0.000e+0, PID: 63.91 | (Group II intron-encoded protein LtrA {ECO:0000313... [more] |
| A0A7N2MSG6 | E-Value: 0.000e+0, PID: 64.39 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A6A4L213 | E-Value: 0.000e+0, PID: 65.16 | (Uncharacterized protein {ECO:0000313|EMBL:KAE9449... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |