XM_017397068.1

Resource Type: 
Polypeptide
Name: 
XM_017397068.1
Identifier: 
XM_017397068.1-protein
Sequence: 
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKK
EIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKI
CEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFE
AEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPD
QVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTIPPG
LVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQD
STSDVPKTPSSKSTAVGASAPTPPTGSHTTGIPNNTAHILPGMSTASAIQ
SGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGL
RGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADER
LAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS
PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFLQRLQQVQQGQSTMLG
MPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVT
SASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSA
AESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPG
QPLQSNQSSGSLGVIGRRSVSDLGAIGGPSLNSAGMHDQLYNLQMLESAY
YKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYG
TDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATD
DYEQGTYVYFDFHISDESQHGWCQRIKTEFRFEYNYLEDELIV
Sequence Length: 
893
Sequence Checksum: 
179ccad75f3ad16e541308f62878749c
View location in JBrowse: 
DCARv2_Chr5:8451872..8469315+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017397068.1, derives from mRNA, XM_017397068.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZL60 ((Putative CCR4-NOT transcription complex subunit 3 isoform X1 {ECO:0000313|EMBL:MPA45100.1}))

HSP 1 Score: 1365.13 bits (3532), Expect = 0.000e+0
Identity = 692/906 (76.38%), Postives = 773/906 (85.32%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKSTAVGASAPTPPTGSHTT-GIPNNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGLRGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFL-QRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAIG----GPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQIDSFEAE+EGL+VKKGKTRPPRLTHLE SITRHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDY+ERNQEDFEEF+DVDELY SLPL+KVESLEDLVT  PPGLVKGVGATSA+LS+K SLT S AQL           +S+ EQV+ET  QDS SD V +TP SK++A+G+SAP+ P GSH T    N +AH L G S AS+I  G +  +G+LE + A VSS+P++IS S KEEE    PGRKSSPAL+ETGLRG+ RG LS+ LST+ P +SGST+P+NGA GA+  ASE+AKRN++GADERL  +G+VQPL SPLSNR++L  AAK+ DGI+  E+GN GE A ++ R+FS    PG QWRPGSSFQNQNE GQ RGRTEIAPDQREK+L +  Q  QQGQS +LGMPPLAG NHKQFSSQQ N  LQQFNSQS + SPQVGLG+GVQ  S++T TS SLQQQPN ++ QQ +Q   +ST  KD++V H KVD+LQ Q  +SDDS AES+P +G+ KNLMNE D+KASY+LDTP GV+GSSTE   + RD DLSPGQPLQSNQ SGSLGVIGRRSVSDLGAIG    G +++S GMHDQLYNLQMLE+AYYKLP PKDSERAKSYTPRHPA+TP SYPQVQAPIVNNPAFWERLG DNYGTDTLFFAFY QQNTYQQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ TD++EQGTYVYFDFHI+ DE QHGWCQRIKTEF FEYNYLEDELIV
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYMERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTTGPPGLVKGVGATSAVLSMKTSLTASPAQLSG---------TSIPEQVQETASQDSNSDIVSRTPPSKNSAIGSSAPSTPAGSHATPSTLNASAHNLSGASPASSILLGSASVRGVLENSGAAVSSSPINISSSAKEEEIANFPGRKSSPALAETGLRGIARGGLSNQLSTSIPLNSGSTVPSNGALGAVPSASEMAKRNILGADERLGSSGMVQPLVSPLSNRMILPQAAKSNDGISSDESGNAGETAVMAGRVFSASVVPGTQWRPGSSFQNQNEAGQFRGRTEIAPDQREKYLQRFQQVQQQGQSNLLGMPPLAGGNHKQFSSQQQNPHLQQFNSQSLSGSPQVGLGLGVQTASLNTATSTSLQQQPN-SIHQQSTQQALISTGPKDAEVSHTKVDDLQQQQTLSDDSTAESAPNSGLGKNLMNEADLKASYSLDTPAGVSGSSTEPTPVLRDADLSPGQPLQSNQPSGSLGVIGRRSVSDLGAIGDNLSGSAVSSGGMHDQLYNLQMLEAAYYKLPHPKDSERAKSYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGVDNYGTDTLFFAFYNQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYFDFHIANDEMQHGWCQRIKTEFTFEYNYLEDELIV 896
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZLK5 ((Putative CCR4-NOT transcription complex subunit 3 isoform X1 {ECO:0000313|EMBL:MPA45099.1}))

HSP 1 Score: 1360.9 bits (3521), Expect = 0.000e+0
Identity = 690/906 (76.16%), Postives = 772/906 (85.21%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKSTAVGASAPTPPTGSHTT-GIPNNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGLRGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFL-QRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAIG----GPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQIDSFEAE+EGL+VKKGKTRPPRLTHLE SITRHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDY+ERNQEDFEEF+DVDELY SLPL+KVESLEDLVT  PPGLVKGVGATSA+LS+K SLT S AQL           +S+ EQV+ET  QDS SD V +TP SK++A+G+SAP+ P GSH T    N +AH L G S AS+I  G +  +G+LE + A VSS+P++IS S KEEE    PGRKSSPAL+ETGLRG+ RG LS+ LST+ P +SGST+P+NGA GA+  ASE+AKRN++GADERL  +G+VQPL SPLSNR++L  AAK+ DGI+  E+GN GE A ++ R+FS    PG QWRPGSSFQNQNE GQ RGRTEIAPDQREK+L +  Q  QQGQS +LGMPPLAG NHKQFSSQQ N  LQQFNSQS + SPQVGLG+GVQ  S++T TS SLQQQPN ++ QQ +Q   +ST  KD++V H KVD+LQ Q  +SDDS AES+P +G+ KNLMNE D+KASY+LDTP GV+GSSTE   + RD DLSPGQPLQSNQ SGSLGVIGRRSVSDLGAIG    G +++S GMHDQLYNLQMLE+AYYKLP PKDSERAKSYTPRHPA+TP SYPQVQAPIVNNPAFWERLG DNYGTDTLFFAFY QQNTYQQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ TD++EQGTYVYFDFHI+ DE QHGWCQRIKTEF FEY +LEDELIV
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYMERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTTGPPGLVKGVGATSAVLSMKTSLTASPAQLSG---------TSIPEQVQETASQDSNSDIVSRTPPSKNSAIGSSAPSTPAGSHATPSTLNASAHNLSGASPASSILLGSASVRGVLENSGAAVSSSPINISSSAKEEEIANFPGRKSSPALAETGLRGIARGGLSNQLSTSIPLNSGSTVPSNGALGAVPSASEMAKRNILGADERLGSSGMVQPLVSPLSNRMILPQAAKSNDGISSDESGNAGETAVMAGRVFSASVVPGTQWRPGSSFQNQNEAGQFRGRTEIAPDQREKYLQRFQQVQQQGQSNLLGMPPLAGGNHKQFSSQQQNPHLQQFNSQSLSGSPQVGLGLGVQTASLNTATSTSLQQQPN-SIHQQSTQQALISTGPKDAEVSHTKVDDLQQQQTLSDDSTAESAPNSGLGKNLMNEADLKASYSLDTPAGVSGSSTEPTPVLRDADLSPGQPLQSNQPSGSLGVIGRRSVSDLGAIGDNLSGSAVSSGGMHDQLYNLQMLEAAYYKLPHPKDSERAKSYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGVDNYGTDTLFFAFYNQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYFDFHIANDEMQHGWCQRIKTEFTFEYQFLEDELIV 896
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZKD7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8519055.1}))

HSP 1 Score: 1293.1 bits (3345), Expect = 0.000e+0
Identity = 673/905 (74.36%), Postives = 757/905 (83.65%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLV-TIPPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSDV-PKTPSSKSTAVGASAPTPPTGSHTTGIPNNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGLRGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFLQRL-QQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAIG----GPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHI-SDESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQIDSFEAE+EGL+VKKGKTRPPRLTHLE SITRHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDY+ERNQEDFE+F+DVDELY SLPL+KVESLEDLV T+PPGLVKGV ATSA+LS+K +LT S AQLP          +S+ EQVEE   QDS SD+ P+TP  K++A+G+ AP+ P    T G  N +A+ L G STASAI  G +  +G+LE A A VSS+ ++IS + KEEE    PG KSSPAL+ETGLR +GRG LS+  ST+ P + GS +P+NGA GA+   SE+AKRN++GA+ERL  +GIVQPL SPLSNR++L  AAKA DG+N  E+GN GEAA ++ R+F+    PG QWRPGSSF NQNEVGQ RGRTEIAPDQREK+L RL Q  QQGQS +LGMPPLAG NHKQFSSQQ N  LQQFNSQS + SPQVGLG+GVQ   ++T TS    QQPN  LQQ  +Q   + T  KD++V H K +++Q Q  +SDD A ES+P +GV KNLMNE D+KASY LDT  G++GSST+   +PRD DLSPGQPL SNQ SGSLGVIGRRS+SDLGAIG    G +++S GMHDQLYNLQMLESAYYKLP PKDSERAKSY PRHPA+TP SYPQVQAPIVNNPAFWERLGADNYGTDTLFF+FYYQQNTYQQYLAAKELKKQSWR+H+KY+TWFQRHEEPK+ TD++EQGTYVYFDFHI SDE QHGWCQRIKTEF FEY YLEDEL+V
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYMERNQEDFEDFSDVDELYNSLPLDKVESLEDLVTTVPPGLVKGVVATSAVLSMKTTLTASPAQLPG---------TSIPEQVEEAASQDSNSDILPRTP-PKNSAIGSPAPSTP----TPGTLNASANNLSGASTASAILLGSASVRGVLENAGAAVSSSTINISNAAKEEEIANFPGHKSSPALAETGLRSLGRGGLSNQPSTSIPLNPGSAVPSNGALGAVPSVSEMAKRNILGAEERLGSSGIVQPLVSPLSNRMILPQAAKASDGVNSDESGNAGEAAIMASRVFAASVVPGTQWRPGSSFPNQNEVGQFRGRTEIAPDQREKYLHRLQQVQQQGQSNLLGMPPLAGGNHKQFSSQQQNQHLQQFNSQSLSGSPQVGLGLGVQTAGLNTATST---QQPNSILQQS-TQQALIPTGPKDAEVSHTKAEDMQQQRTLSDDLATESAPNSGVGKNLMNEADLKASYTLDTSPGISGSSTDPTPLPRDADLSPGQPLHSNQPSGSLGVIGRRSISDLGAIGDNLSGSAVSSGGMHDQLYNLQMLESAYYKLPHPKDSERAKSYIPRHPAVTPPSYPQVQAPIVNNPAFWERLGADNYGTDTLFFSFYYQQNTYQQYLAAKELKKQSWRYHRKYDTWFQRHEEPKVTTDEFEQGTYVYFDFHIASDEMQHGWCQRIKTEFTFEYKYLEDELVV 887
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GPA7 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5941276.1}))

HSP 1 Score: 1285.01 bits (3324), Expect = 0.000e+0
Identity = 660/890 (74.16%), Postives = 745/890 (83.71%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKSTAVGASAPTPPTGSHTT-GIPNNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGLRGVGRGSLSSPLSTANPP----SSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFSP----GMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFL-QRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAI----GGPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQ-NTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGW 872
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMD+RKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQIDSFEAE+EGL+VKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQE F+EF+DVDELY +LPL+KVESLEDLV I PPGL KGVG TSA+LS+K SLT   AQ PA +TS+ Q  +S+ EQVEET  QDS SD V +TP +K++ +G+S+PT P GSH T G+ N + H L   S A  I  GPS  +G+LE A A  SS+ +++S+S KEEE    PGRKSSPAL+ETGLRG+ RG     L+T  PP    SSGS IP+NGA GA+  ASE+ KRN++G DERL  +G+VQPL SPLSNR+++  AAKA DG    + GN+GEAA ++ R+FSP    G+QWRPGSSFQNQ+EVGQ RGRTEIAPDQREKFL +  Q  QQGQS +LGMPPL G NHKQFS+QQ NSLLQQFNSQ S   PQVGLG+GVQAP ++TV S+S QQQPN ++ QQ +Q   +ST   D++VGHAK++E Q Q N+SDDS  E  P +G+  NL+N+ D+KASY +DTP G +GS TE+AQ+PRD+DLSPGQPLQSNQ+SGSLGVIGRRSVSDLG I    GG S NS GMHDQLYN QMLE+AYYKLPQPKDSERAKSY PRHPA TP SYPQ QAPIVNNPAFWERLGA++YGTDTLFFAFYYQQ NTYQQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ TD+YEQGTYVYFDFHI+ DE QHGW
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDSRKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEVFDEFSDVDELYNTLPLDKVESLEDLVAIVPPGLAKGVGTTSAVLSVKTSLTAPPAQQPATVTSSVQQGTSIQEQVEETASQDSISDQVARTP-TKNSPIGSSSPTTPVGSHATPGMVNASTHNLSIASAAPVILPGPSSVRGVLENAGAAASSSSLNLSISAKEEESASFPGRKSSPALAETGLRGIARGG----LTTLPPPSVTHSSGSAIPSNGALGAVPSASEMTKRNILGTDERLGSSGMVQPLVSPLSNRMIMPQAAKANDGAGSADGGNIGEAAVMAGRVFSPSVVSGIQWRPGSSFQNQSEVGQFRGRTEIAPDQREKFLQRFQQVQQQGQSNLLGMPPLGGGNHKQFSAQQQNSLLQQFNSQGSPVLPQVGLGLGVQAPGLNTVASSS-QQQPN-SIHQQSAQQALISTGPNDAEVGHAKLEETQQQQNLSDDSTTEPVPSSGLGMNLINDGDLKASYPVDTPAGASGSLTESAQVPRDIDLSPGQPLQSNQTSGSLGVIGRRSVSDLGTIGDNLGGSSTNSGGMHDQLYNFQMLEAAYYKLPQPKDSERAKSYNPRHPAATPPSYPQSQAPIVNNPAFWERLGAESYGTDTLFFAFYYQQANTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVTTDEYEQGTYVYFDFHITNDEMQHGW 883
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7TI48 ((Uncharacterized protein {ECO:0000313|EMBL:CBI29924.3}))

HSP 1 Score: 1275.38 bits (3299), Expect = 0.000e+0
Identity = 671/907 (73.98%), Postives = 763/907 (84.12%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSDV-PKTPSSKSTAVGASAPTPPTGSHTTGIP-NNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGL-RGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFL-QRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAIG----GPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLN VV ELESQIDSFEAE+EGL+VKKGKTRPPRLTHLE SI RHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQEDFEEF+DVD+LY SLPL+KVESLEDLVTI  PGLVKG  A    LSLK SLT +  Q+PA +TS  Q S+S+ EQ EET  QDS S++ P+TP +K++ +G+SA + PTGSH T IP N +AH L   S A  I    +  +G+LE A   +SS PV++S S KEEE    PGR+SSPAL ETGL RG+GRG  SS  ST+ P SSG TIP+NG  GA+  A++++KR+ +GADERL G G+VQPL SPLSNR++L   AK  DG  + ++ ++GEAA I+ R+FS    PGMQWRPGSSFQNQNE GQ RGRTEI  DQ+EKFL +  Q  QQ QST+LGMPPL+G NHKQFS+QQ N LLQQFNSQSS+ SPQVGLG+GVQAP ++TVTSA++QQQP  ++ QQ +Q   +ST  KD+DVGH K ++ Q Q NVSDDS  ES+P + + KNLMNEDD+KA YA+DT  GV+GS TE +Q+PRD DLSPGQP+QSNQ SGSLGVIGRRS+SDLGAIG    G ++NS GMHDQLYNLQMLE+A+YKLPQPKDSERA++YTPRHPA+TP SYPQVQAPIVNNPAFWERLG D +GTDTLFFAFYYQQNTYQQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ATD++EQGTYVYFDFHI+ D+ QHGWCQRIKTEF FEYNYLEDELIV
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNTVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSIARHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDDLYNSLPLDKVESLEDLVTIGAPGLVKGAPA----LSLKNSLTPT--QIPATVTSPLQQSTSIQEQSEETASQDSNSEIGPRTPPAKNSVIGSSASSTPTGSHATPIPLNVSAHNL-SASPAPTILPSSTSVRGVLENAGTAISS-PVNVSSSAKEEEIASFPGRRSSPALVETGLVRGIGRGVPSSQPSTSVPLSSGITIPSNGGLGAVPSANDMSKRSTLGADERLGGGGMVQPLVSPLSNRMILPQTAKTNDGTGLADSSSVGEAAVIAGRVFSPSVVPGMQWRPGSSFQNQNESGQFRGRTEITLDQKEKFLQRLQQVQQQTQSTILGMPPLSGGNHKQFSAQQQNPLLQQFNSQSSSVSPQVGLGVGVQAPGLNTVTSAAIQQQPG-SIHQQSNQQALLSTGPKDADVGHVKAEDQQQQQNVSDDSTMESAP-SSLGKNLMNEDDLKAPYAMDTSAGVSGSLTEPSQVPRDTDLSPGQPVQSNQPSGSLGVIGRRSISDLGAIGDTLSGSAVNSGGMHDQLYNLQMLEAAFYKLPQPKDSERARNYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGLDTFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV 897
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834H6A0 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7146150.1}))

HSP 1 Score: 1273.46 bits (3294), Expect = 0.000e+0
Identity = 666/908 (73.35%), Postives = 750/908 (82.60%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKS---TAVGASAPTPPTGSHTTGIP-NNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGLRGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFSP----GMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFL-QRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAI----GGPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHISDESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDAR+LIEREMERFKICEKETKTKAFSKEGLGQQPKTDP+EKAKSETRDWLNNVVSELESQIDS EAE+EGL+VKKGKTRPPRLTHLE SI RHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQEDF++F+DVDELY +LPL+KVESLE+LV I PP LVKGVGATS++L +K S+T    Q PA  TS  +  +S+ EQ EE   QD  SD +P+TP  K    T +G+S P+ P  SH T +  N + H  P +S ASAI SGPS A  +LE   AV SS+ +++S S KEEE    PG KSSPALSETGLRG+GRG L++P ST  P S+GS IP+NGA GA+  ASE+AKRN++GADERL   GIVQPL SPLS+R +L  A KA DG + ++  N+GE+A ++ R+FSP    GMQWRPGSSF NQ+E GQ+RGRTEI PDQREKFL +  Q  QQGQS +LGMP L G NHKQFS+QQ N LLQQFN QSSA SPQVG GIGVQAPS++ + S S Q Q N ++ QQ SQ    ST  KD+D+GHAKV+E   Q N+SDDS +E +P +GV KN +NED++KASYALDTP G +GS TE+ Q PRD+DLSPGQPLQ+NQ SGSLGVIGRRSVSDLGAI    GG S NS GMHDQ YN QMLE+AY+K PQPKDSERAKSY PRHPA+TP SYPQ QAPIVNNPAFWERLGAD+YG DTLFFAFY+QQNTYQQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ TD+YEQGTYVYFDFH +DE QHGWCQRIKTEF FEYNYLEDELIV
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARRLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVSELESQIDSCEAEIEGLSVKKGKTRPPRLTHLETSIVRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDDFSDVDELYNTLPLDKVESLEELVAIVPPALVKGVGATSSVLGMKTSVTALPTQQPATGTSLVEQGTSIQEQAEEMASQDVNSDLLPRTPPPKDSPITPIGSSGPSTPVLSHATPLTVNASPHNSPTVSAASAILSGPSSAPVILENVGAVASSSSLTLSNSAKEEETARFPGHKSSPALSETGLRGIGRGGLANPPSTIIPISAGSAIPSNGAPGAVPSASEMAKRNILGADERLGSAGIVQPLVSPLSSRTILPQAPKANDGSSSSDGVNIGESAAMTSRVFSPSAVSGMQWRPGSSFPNQSEGGQIRGRTEITPDQREKFLQRFQQVQQQGQSNLLGMPSLGGGNHKQFSAQQ-NPLLQQFNPQSSAVSPQVGFGIGVQAPSLNNIASPS-QLQTN-SIHQQSSQLPLTSTGPKDADLGHAKVEETHQQQNLSDDSTSEPAPSSGVGKNPINEDELKASYALDTPAGASGSLTESTQGPRDIDLSPGQPLQTNQPSGSLGVIGRRSVSDLGAIGDNLGGSSANSGGMHDQSYNFQMLEAAYHKRPQPKDSERAKSYNPRHPAVTPPSYPQAQAPIVNNPAFWERLGADSYGIDTLFFAFYHQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVTTDEYEQGTYVYFDFHYNDEMQHGWCQRIKTEFTFEYNYLEDELIV 905
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067JC18 ((Uncharacterized protein {ECO:0000313|EMBL:KDP20268.1}))

HSP 1 Score: 1257.28 bits (3252), Expect = 0.000e+0
Identity = 650/907 (71.66%), Postives = 752/907 (82.91%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKSTAVGASAPTPPTGSHTTGIPNNT-AHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGL-RGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKF-LQRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAIG----GPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQIDSFEAE+EGLTVKKGK+RPPRLTHLEASI RHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQEDFEEF+DVDELY SLPL+KVESLEDLVTI PPGLVKG    + + +LK SL +S++Q+PA +T   Q ++SV EQ ++T  QDS SD V +TP +KS+ +G++A T PT +H T +  +   H + G++T S + +  +P + +LEIA+  + S+P +++ S KEEE  G P R+ SPALS+TGL RG+GRGSLSS  S + P SS + +P+NG  GA+   S+IAKRN++  D+RL  + +VQPL SPLSNR++L    K+ DG ++ ++ N+GEAAGI  R+FS    P MQWRPGSSFQNQNE GQ R RTEIAPDQREKF  +  Q  QQG ST+LGMPPLAG NHKQFS+QQ N LLQQFNSQS + SPQ  LG+GVQA  ++TVTSA+L QQPN T+ QQ SQ   MS+  KD+DV  +KV+E Q   N+ DDS  ES+P +G+ KNL+NED++K +Y +DT  G +GS  E AQMPRD+DLSPGQP+QS+Q S  LGVIGRRSVSDLGAIG    G ++NS  MHDQ+YNLQMLE+AY+KLPQPKDSERA+SYTPRHPA TP SYPQVQAPIVNNP FWERL  D+YGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFH+KYNTWFQRHEEPK+ATD+YEQGTYVYFDFHI+ D+ QHGWCQRIKTEF FEYNYLEDELIV
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLTVKKGKSRPPRLTHLEASIVRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTIGPPGLVKG----APVHTLKTSLASSASQIPATVTPAHQQATSVQEQPDDTASQDSNSDIVARTPPAKSSMIGSAAST-PTVNHATPVSASAPPHTVSGVTTPSILPTS-TPVRSVLEIAATAIPSSPATLANSAKEEEVAGFPVRRPSPALSDTGLTRGIGRGSLSSQPSPSIPISSAA-VPSNGTLGAVPSVSDIAKRNILSTDDRLGSSAMVQPLTSPLSNRMILPQTGKSNDGTSIVDSSNVGEAAGIGGRVFSPSLVPSMQWRPGSSFQNQNEPGQFRARTEIAPDQREKFLQRLQQVQQQGHSTLLGMPPLAGGNHKQFSAQQ-NPLLQQFNSQSPSVSPQANLGLGVQASGLNTVTSAAL-QQPN-TIHQQASQQVVMSSGAKDADVSLSKVEEQQQPQNLPDDSTPESAPSSGLSKNLVNEDELKTAYTMDTSTGASGSLAEPAQMPRDIDLSPGQPIQSSQPSTGLGVIGRRSVSDLGAIGDNVSGSAVNSGAMHDQIYNLQMLEAAYHKLPQPKDSERARSYTPRHPAATPPSYPQVQAPIVNNPGFWERLTIDSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV 897
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P2S1 ((CCR4-NOT transcription complex subunit like {ECO:0000313|EMBL:PSR84584.1}))

HSP 1 Score: 1255.74 bits (3248), Expect = 0.000e+0
Identity = 653/907 (72.00%), Postives = 736/907 (81.15%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKSTAVGASAPTPPTGSHTT-GIPNNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGLRGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKF-LQRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDS-DVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTP-GGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAI----GGPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHISDESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARK IEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSE RDWLNNVV ELESQID+FEAE+EGL+V+KGKTRPPRLTHLEASI+RHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQEDF+EF+DVDELY SLPL+KVESLEDLV I PP LVKGVG T+A L +K S   S  Q P  +T   Q  + + EQ EET   D  SD V +TP  K++ + +SAP+ P GSH T G  N + H L   STAS I SG S  +  LE A + VSS+P++IS S+KEE+ T  PGRKSSPAL+ETGLRG+ RG L++  ST  P  SG   P NG  GA   ASE+ K+N+VG DERL G+G+VQPL SPLSNR++L  AAKA DG    + GN GE A ++ R+FS    PGMQWRPGS FQNQ+EVGQ RGRTEIAPDQREKF  +  Q  QQG S +LGM PL G N KQFS+QQ N LLQQFNSQS + SPQ GLG+GVQA  ++T  S+S QQQP   + QQ +Q   +ST  K++ +VGHAK++E+Q Q N+SDDS  E +  TG  KNL+N+DD+KAS ALD P GGV+GSSTE   +PRD+DLSPGQPLQSNQ SGSLGVIGRRSVSDLGAI    GG S NS GM DQ Y++QMLE+AYYKLP PKDSERAKSY PRHPA+TP SYPQ QAPIVNNPAFWERLGADN+GTDTLFFAFYYQQNTYQQYLAAKELKKQSWR+H+KY+TWFQRHEEPK+ TD+YEQG+Y+YFDFH SD+ Q GWCQRIK +F FEYNYLEDELIV
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSEARDWLNNVVGELESQIDNFEAEIEGLSVRKGKTRPPRLTHLEASISRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVIIGPPALVKGVGTTTATLGIKTSSALSPTQQPGTVTPFQQ-GAPIQEQAEETASLDGNSDAVARTPPPKNSTIVSSAPSTPAGSHATPGAVNTSTHSLSVASTASTILSGSSSVRVALENAGSAVSSSPLNISNSSKEEDTTSFPGRKSSPALAETGLRGISRGGLTNQPSTTIPLPSGIANPINGGLGATASASEMIKKNIVGPDERLGGSGVVQPLVSPLSNRMILPQAAKANDGTGPADGGNTGEGAVMAGRVFSPSAVPGMQWRPGSPFQNQSEVGQFRGRTEIAPDQREKFLQRLQQVQQQGPSNILGMAPLGGGNPKQFSAQQQNPLLQQFNSQSLSVSPQAGLGLGVQAAGLTTSASSS-QQQPT-AIHQQSAQQALISTGPKEAGEVGHAKIEEMQQQQNLSDDSTTEPASSTGFGKNLINDDDLKASIALDAPAGGVSGSSTEPTPVPRDIDLSPGQPLQSNQPSGSLGVIGRRSVSDLGAIGDNLGGSSANSGGMRDQSYSMQMLEAAYYKLPHPKDSERAKSYIPRHPAVTPPSYPQGQAPIVNNPAFWERLGADNFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYSTWFQRHEEPKVTTDEYEQGSYIYFDFHTSDDMQRGWCQRIKPDFMFEYNYLEDELIV 904
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9SHH5 ((Uncharacterized protein {ECO:0000313|EMBL:EEF36934.1}))

HSP 1 Score: 1255.35 bits (3247), Expect = 0.000e+0
Identity = 647/908 (71.26%), Postives = 743/908 (81.83%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTIPPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSD-VPKTPSSKSTAVGASAPTPPTGSHTT----GIPNNTAHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGL-RGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS---PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKFL-QRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAI----GGPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQAL+DARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQIDSFEAEMEGL+VKKGKTRPPRL HLE SI+RHK+HIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQEDF+EF+DVDELY SLPL+KVESLE+LVT  P LVKG    + + SLK SL +SS+Q+ A  TS  QP+++V EQ E+T  QDS  D V +TP +KS+ +G+SA + PT +H+T    G+P   AH L G S AS+I  G S  +G LE A A  SS P S++ S KEEE  G P R+ SPAL + GL RG+GRG++ S   ++ P SSG+ +P+NGA GA+  AS+IAKRN++  D+RL   G+VQPL SPLSNR++L  A K  DG  + ++ N+GEAA I  R+FS   PGMQWRPGSSFQNQNE GQ R RTEI PDQREKFL +  Q  QQG +T+LGMPPLAG NHKQFS+QQ NSLLQQFNSQSS+ S Q  LG+G QAP ++ +TSA+L  QP  TL QQ +Q   MS   KD+D+G +KV+E Q   N+ DDS AES+P +G+ KNLMNED++K  Y +DTP G +G+  E  Q+PRD DLSPGQP+QS+Q S  LGVIGRRSVSDLGAI    GG ++NS  MHDQLYNLQMLE+AY++LPQPKDSERA+SYTPRHP  TP SYPQVQAPIVNNPAFWERL  D+YGTDTLFFAFYYQQNT+QQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ATD+YEQGTYVYFDFHI+ D+ QHGWCQRIKTEF FEYNYLEDEL+V
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEMEGLSVKKGKTRPPRLMHLETSISRHKSHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVESLEELVT--PALVKG----APVHSLKTSLASSSSQVLATATSLQQPATNVQEQAEDTASQDSNPDIVARTPPAKSSTIGSSAASTPTVNHSTPISVGLP---AHTLSGAS-ASSILPGSSSVRGALENAPANPSS-PASLANSVKEEENAGFPVRRPSPALVDPGLARGIGRGAIYSQPPSSIPLSSGA-VPSNGAVGAVPTASDIAKRNILSTDDRLGSGGMVQPLASPLSNRMILPQAGKVGDGTGIVDSNNVGEAAAIGGRVFSPLVPGMQWRPGSSFQNQNEQGQFRARTEITPDQREKFLQRFQQVQQQGPNTLLGMPPLAGGNHKQFSAQQ-NSLLQQFNSQSSSVS-QATLGLGSQAPGINAITSAAL--QPPNTLLQQSTQQVVMS---KDADIGLSKVEEQQQPQNLPDDSIAESAPMSGLSKNLMNEDELKTPYTMDTPTGASGTLAEPVQLPRDTDLSPGQPIQSSQPSTGLGVIGRRSVSDLGAIGDNLGGSAVNSGAMHDQLYNLQMLEAAYHRLPQPKDSERARSYTPRHPTATPPSYPQVQAPIVNNPAFWERLTIDSYGTDTLFFAFYYQQNTHQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV 889
[Close]
BLAST of XM_017397068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1Q3BXJ1 ((Not3 domain-containing protein/NOT2_3_5 domain-containing protein {ECO:0000313|EMBL:GAV72700.1}))

HSP 1 Score: 1250.73 bits (3235), Expect = 0.000e+0
Identity = 655/908 (72.14%), Postives = 735/908 (80.95%), Query Frame = 0
 
Query:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAEMEGLTVKKGKTRPPRLTHLEASITRHKAHIMKLELILRLLDNDELSPDQVNDVKDFLDDYVERNQEDFEEFNDVDELYISLPLEKVESLEDLVTI-PPGLVKGVGATSAILSLKPSLTTSSAQLPAALTSTDQPSSSVLEQVEETVFQDSTSDVPKTPSSKSTAVGASAPTPPTGSHTTGIPNNT---AHILPGMSTASAIQSGPSPAKGMLEIASAVVSSAPVSISVSTKEEEFTGSPGRKSSPALSETGL-RGVGRGSLSSPLSTANPPSSGSTIPNNGAFGALTPASEIAKRNMVGADERLAGTGIVQPLDSPLSNRIMLSHAAKAFDGINMTENGNLGEAAGISPRIFS----PGMQWRPGSSFQNQNEVGQLRGRTEIAPDQREKF-LQRLQQVQQGQSTMLGMPPLAGENHKQFSSQQHNSLLQQFNSQSSAASPQVGLGIGVQAPSVSTVTSASLQQQPNPTLQQQFSQHGPMSTSLKDSDVGHAKVDELQHQPNVSDDSAAESSPRTGVVKNLMNEDDIKASYALDTPGGVTGSSTEAAQMPRDVDLSPGQPLQSNQSSGSLGVIGRRSVSDLGAIG----GPSLNSAGMHDQLYNLQMLESAYYKLPQPKDSERAKSYTPRHPAITPSSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHKKYNTWFQRHEEPKLATDDYEQGTYVYFDFHIS-DESQHGWCQRIKTEFRFEYNYLEDELIV 893
            MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVV ELESQID FEAE+EGL+VKKGKTRPPRLTHLE SITRHKAHIMKLELILRLLDNDELSP+QVNDVKDFLDDYVERNQEDFEEF+DVDELY SLPL+KVESLEDLVTI PPGLVKG    + ILSLK SL  S++Q+PA +TST Q S SV EQ EET  QD  SD+ +TP  KS+ + ++  T P G     IP      AH LPGMST S +    +  +  LE A A   S+PV++S S KEE+    PG +SSP+L++T + R +GRG LSS  S++ P  SGS +P NGAFGA+  AS+IAKRN++GADERL  +G+VQPL SPLSNR++L  A K  DG  + +  + GEAA    R+FS    PGMQWRPGSSFQNQNE GQ R RTEIAPDQREKF  +  Q  QQG ST+LGMPP     HKQFS+QQ N LLQQFNSQSS+ S Q GLGIGVQA   +TVTSASLQQQP  ++ QQ SQ   MST  KD+++GHAKVDE Q Q N+ DDS +ES+  +G+ KN++ EDD K SY +DT  GV  S  E AQ+ RD+DLSPGQPLQS+Q SG+LGVIGRRSVSDLG IG    G ++NS GMHDQ+YNLQMLE+A+ KLPQPKDSER ++YTPRH A TP SYPQVQAP VN PAFWERLG + YGTDTLFFAFYYQQNTYQQYLAAKELKKQSWR+H+KYNTWFQRHEEPK+ATD+YEQGTYVYFDFHI+ D+SQHGWCQRIKTEF FEYNYLEDEL V
Sbjct:    1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDIFEAEIEGLSVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDELYSSLPLDKVESLEDLVTIGPPGLVKG----APILSLKTSLAASASQVPATITSTLQQSVSVQEQSEETASQDGNSDIIRTPPPKSSTINSTPTTTPAG--VLAIPVAVIVPAHNLPGMSTTSPVLPATNSVRAALENAGAANLSSPVNVSNSAKEEDIASFPGHRSSPSLADTAMVRSIGRGGLSSQPSSSVPLGSGSVVPTNGAFGAVPSASDIAKRNILGADERLGSSGLVQPLVSPLSNRMVLPQAVKGNDGTGLVDTTSAGEAATTPGRVFSPSVVPGMQWRPGSSFQNQNESGQFRTRTEIAPDQREKFLQRLQQVQQQGHSTLLGMPP-----HKQFSAQQQNPLLQQFNSQSSSVS-QAGLGIGVQATGTNTVTSASLQQQPI-SMHQQSSQQALMSTVSKDTEIGHAKVDEQQQQQNLPDDSTSESALSSGMAKNVI-EDDHKPSYGVDTAAGVPSSLAEPAQVVRDIDLSPGQPLQSSQPSGTLGVIGRRSVSDLGTIGDNLSGSTINSGGMHDQMYNLQMLEAAFCKLPQPKDSERPRTYTPRHLAATPPSYPQVQAPTVNLPAFWERLGVEGYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDSQHGWCQRIKTEFTFEYNYLEDELNV 894
Match NameStatsDescription
A0A5B6ZL60E-Value: 0.000e+0, PID: 76.38(Putative CCR4-NOT transcription complex subunit 3... [more]
A0A5B6ZLK5E-Value: 0.000e+0, PID: 76.16(Putative CCR4-NOT transcription complex subunit 3... [more]
A0A5J4ZKD7E-Value: 0.000e+0, PID: 74.36(Uncharacterized protein {ECO:0000313|EMBL:KAA8519... [more]
A0A7J7GPA7E-Value: 0.000e+0, PID: 74.16(Uncharacterized protein {ECO:0000313|EMBL:KAF5941... [more]
D7TI48E-Value: 0.000e+0, PID: 73.98(Uncharacterized protein {ECO:0000313|EMBL:CBI2992... [more]
A0A834H6A0E-Value: 0.000e+0, PID: 73.35(Uncharacterized protein {ECO:0000313|EMBL:KAF7146... [more]
A0A067JC18E-Value: 0.000e+0, PID: 71.66(Uncharacterized protein {ECO:0000313|EMBL:KDP2026... [more]
A0A2R6P2S1E-Value: 0.000e+0, PID: 72.00(CCR4-NOT transcription complex subunit like {ECO:... [more]
B9SHH5E-Value: 0.000e+0, PID: 71.26(Uncharacterized protein {ECO:0000313|EMBL:EEF3693... [more]
A0A1Q3BXJ1E-Value: 0.000e+0, PID: 72.14(Not3 domain-containing protein/NOT2_3_5 domain-co... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.