XM_017394279.1

Resource Type: 
Polypeptide
Name: 
XM_017394279.1
Identifier: 
XM_017394279.1-protein
Sequence: 
MAATTVLRTAILGGPQASITNPHHNSFPKLVSFLMSTRKPIWPRSHFVSI
KFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDAD
SAAVEDDGETATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEA
LLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFS
LLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAE
VLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGD
RLLRPSMVKVSAGPGPAKSISVQPSGASEGSADVPEAREEDSAEPAPPED
Sequence Length: 
350
Sequence Checksum: 
fa7667fb6b286b60bbb30e62bca6a899
View location in JBrowse: 
DCARv2_Chr5:9468903..9474649-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017394279.1, derives from mRNA, XM_017394279.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BE25 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640} (Fragment))

HSP 1 Score: 361.303 bits (926), Expect = 1.014e-121
Identity = 211/343 (61.52%), Postives = 254/343 (74.05%), Query Frame = 0
 
Query:    3 ATTVLRTAILGGPQASITNPHHNSF--PKLVSFLMSTRKPIWPRSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDADSAAVEDDGETATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKSISVQPSGASEGSADVPEAREEDSA 343
            ATTVLRT     P   ++    NSF  PKL+  + S ++   P+   +    +S K  P+ L      L  + F S GE+ ET+E E+   +S++QD+ D   V +DG  A+E+++S+  EPAS IIASLQ Y+EA+A+ DE+K++EIEA LKS EDEK  LE KVA+LS E+SYE+DRILRISADF+NFRKRTERER SL+TNA+GEVVE+LLPVLDNFERAK+QIKVETEGEEKI+NSYQSI KQF E+LGSL V+PVET GNPFDPMLHEAIMREDS EFEEGII+ EFRKGFKLGDRLLRPSMVKVSAGPGPAK    +P G SE      E  EE S 
Sbjct:   27 ATTVLRTPAFRAPPPRLST---NSFKSPKLLC-VSSRQRQTCPQRCLIYSPLSSTKL-PQRL------LQFLPFVSHGETTETEEKEEVQ-ESEIQDNLDGTVVVEDG--ASEEDSSDATEPASVIIASLQSYREALASNDESKVSEIEAFLKSIEDEKIDLERKVATLSEELSYEKDRILRISADFDNFRKRTERERLSLVTNAQGEVVENLLPVLDNFERAKAQIKVETEGEEKISNSYQSIYKQFVEILGSLSVVPVETIGNPFDPMLHEAIMREDSTEFEEGIIIDEFRKGFKLGDRLLRPSMVKVSAGPGPAKP---EPVGQSEEPEGASETNEEGST 352
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251V3A2 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 359.377 bits (921), Expect = 5.329e-121
Identity = 198/356 (55.62%), Postives = 248/356 (69.66%), Query Frame = 0
 
Query:    1 MAATTVLRTAILGGPQASITNPHHNSFPKLVSF-LMSTRKPIWPRSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQL--QDDADSAAVEDDGETATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKSISVQPSGA---SEGSADVPEAREEDSAEPAPPED 350
            MAAT    T     P  +     HNS  KL    L  +R+P WP + F  I  +S+   P  L R  FG      +S  E++ T++  D + D  L  Q+DA+    EDDG+ +TE + +  EE    I++SLQ YKEA+A+ +EAKI+EIE  LKS EDEK  LE K+A+LS E+S  +DR+LRISADF+NFRKRTERER SL+ NA+GEVVE+LLPVLDNFERAK+ IKVE E EEKINNSYQSI KQF E+LGSLGV+PVETTG PFDP+LHEAIMRE+S EF EG+++QEFRKGF++G+RLLRPSMVKVSAGPGP  +  V PSG    + G+  V E  E D +EP+P +D
Sbjct:    1 MAATAASSTTFHLNPPPN----RHNSISKLPFLSLQRSRQP-WP-TQFPLISCSSSINFPNKLSRLPFGFTLCSASSQDETLVTEDENDVLVDGSLPPQEDAEGTTTEDDGDDSTESDGAASEESPVTILSSLQSYKEALADNNEAKISEIETYLKSIEDEKLVLERKLATLSDELSTAKDRVLRISADFDNFRKRTERERISLVANAQGEVVENLLPVLDNFERAKAAIKVENEKEEKINNSYQSIYKQFVEILGSLGVVPVETTGQPFDPLLHEAIMREESTEFGEGVVIQEFRKGFRIGERLLRPSMVKVSAGPGPENTEPVSPSGPEAQAPGADSVEEPEEVDQSEPSPAQD 350
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061F7B9 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 355.91 bits (912), Expect = 1.189e-119
Identity = 200/309 (64.72%), Postives = 233/309 (75.40%), Query Frame = 0
 
Query:   41 IWPRSHFVSIKFNSAKF-CPEVLKRHRFG-------LGSVGFASSGESVETQEVEDEVFDSQLQDDADSA-AVEDDGETATEDETSEEEE-PASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKSISVQPSGASEGSADVPEARE 339
            I P+   V +K   A+  CP      RF        +  V  AS+G   ET E + EV + Q++D +D A AVE+D   A  DE+S+ EE  +SAI++ LQ YKEA+A+ DE+K+A+IEA LKS EDEK  LE+K+ASL  E+S E+DRI+RISADF+NFRKRTERER SL+TNA+GEV+E+LLPVLDNFERAK+QIKVETEGEEKINNSYQSI KQF E+LGSLGV PVET GNPFDPMLHEAIMREDS EFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAK       G S G ADV E  E
Sbjct:   26 ISPKPFRVCLKQRIARTSCP-----FRFSSTPSLRFVKLVPLASNGGETETTEAQQEVQEPQIEDSSDGAVAVEED---AGVDESSDVEEISSSAIVSLLQSYKEALASNDESKVADIEAFLKSIEDEKVDLENKMASLLEELSIEKDRIIRISADFDNFRKRTERERLSLVTNAQGEVLENLLPVLDNFERAKAQIKVETEGEEKINNSYQSICKQFMEILGSLGVEPVETVGNPFDPMLHEAIMREDSTEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKP----EQGESSGGADVGETTE 322
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A059A290 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 352.058 bits (902), Expect = 1.848e-118
Identity = 175/225 (77.78%), Postives = 199/225 (88.44%), Query Frame = 0
 
Query:   94 QLQDDADSAAVEDDGETATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAK 318
            Q++ DAD A V +DG  A E  T  EE+ ASA++ SLQ YKEA+A+ DE+K+AEIEA LKS EDEK ALESKV+ LS E+S ERDRILRISADFENFR+RTERER SL+TNA+GEVVE+LLPVLDNFERAK+QIKVETEGEEKINNSYQ+ISKQF E+LGSLGV+PVET G PFDP+LHEAIMRE+S E+EEGIILQEFRKGFKLG+RLLRPSMVKVSAGPGPAK
Sbjct:   82 QVEGDADGAVVSEDGAAADEI-TDTEEKAASAVLISLQSYKEALASNDESKVAEIEAFLKSIEDEKSALESKVSRLSAELSVERDRILRISADFENFRRRTERERLSLVTNAQGEVVENLLPVLDNFERAKAQIKVETEGEEKINNSYQNISKQFIEILGSLGVVPVETVGTPFDPLLHEAIMREESTEYEEGIILQEFRKGFKLGERLLRPSMVKVSAGPGPAK 305
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314UZU3 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 350.132 bits (897), Expect = 1.565e-117
Identity = 205/331 (61.93%), Postives = 239/331 (72.21%), Query Frame = 0
 
Query:    5 TVLRTAILGGPQA---SITNPHHNSFPKLVSFLMSTRKPI-------WPRSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDADSA-AVED---DGE---TATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAK 318
             VLRT+  G P A   SI +P+    P  VSF  S    I          SH  S++F  AKF P               AS GE+  T+ VE+     +++D +D A +VED   DGE   T+ +DE   EE+P SAIIASLQ+YKEA+A+ DE+K+AEIE+ LK  EDEK  LE KVASLS E+S E+ RILRISADFENFRKRT+RER SL+TNA+GEVVESLLPV+DNFERAK+QIKVETEGEEKINNSYQSI KQF E+L SLGV+PVET G PFDP+LHEAIMREDS EFEEG+I+ EFRKGFKLGDRLLRPSMVKVSAGPGPAK
Sbjct:    3 NVLRTSPFGAPFAQLPSILSPNSQK-PSYVSFRQSQSGSIPYLTLSSLRFSHLPSLRF--AKFVP--------------LASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSIDDEGDAEEKPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKIGLEKKVASLSEELSAEKVRILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNSYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGDRLLRPSMVKVSAGPGPAK 316
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5RXC4 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 349.747 bits (896), Expect = 2.556e-117
Identity = 203/330 (61.52%), Postives = 239/330 (72.42%), Query Frame = 0
 
Query:    5 TVLRTAILGGPQASI--TNPHHNSFPKLVSFLMSTRKPI-------WPRSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDADSA-AVED---DGE---TATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAK 318
             VLRT+  G P A +  T   ++  P  VSF  S    I          SH  S++F  AKF P               AS GE+  T+ VE+     +++D +D A +VED   DGE   T+ +DE   EE+PASA+IASLQ+YKEA+A+ DE+K+AEIE+ LK  EDEK  LE KVASLS E+S E+ RILRISADFENFRKRT+RER SL+TNA+GEVVESLLPV+DNFERAK+QIKVETEGEEKINNSYQSI KQF E+L SLGV+PVET G PFDP+LHEAIMREDS EFEEG+I+ EFRKGFKLGDRLLRPSMVKVSAGPGPAK
Sbjct:    3 NVLRTSPFGAPFAQLPSTLSPNSQKPSYVSFRQSQSGSIPYLTLSSLRFSHLPSLRF--AKFVP--------------LASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSIDDEGDAEEKPASAVIASLQLYKEALASNDESKVAEIESFLKYIEDEKIGLEKKVASLSEELSAEKVRILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNSYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGDRLLRPSMVKVSAGPGPAK 316
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5CZ16 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 348.206 bits (892), Expect = 8.458e-117
Identity = 204/331 (61.63%), Postives = 237/331 (71.60%), Query Frame = 0
 
Query:   28 PKLVSFLMSTRKPI---WPRSHFVSIK--FNSAKFCPEVLKRHRFG----LGSVGFASSGES-------VETQEVEDEVFDSQLQDDADSAAVEDDGETATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKSISVQP---------SGASEGSAD 333
            P L   L   + PI   +P+   VS +   N AK  P  L   RF     L  V FASSGE+       V+  +VED +  + + +D  S   E D     EDE   EE+P SA++ASLQ YKEA+A+ DE+KIAEIE+ LKS EDEK  LE K+ASLS E+S E+DRILRISADF+NFRKRTERER SL+TNA+GEVVESLLPVLDNFERAK QIKVETEGEEKINNSYQSI KQF E+L SLGV+PVET GNPFDP+LHEAIM+EDS+EFEEG+I QEFR+GFKLGDRLLRPSMVKVSAGPGPAK   V P         +G  EGS+D
Sbjct:    9 PSLKPSLPPFQSPISSNYPKPFCVSFRGQRNGAKHSP-ALSSLRFSRSPSLRFVPFASSGETETTETEEVQVPQVEDLLDGTVVAEDVTSDDSESDTSDDVEDEP--EEKPVSAVVASLQSYKEALASNDESKIAEIESFLKSLEDEKLGLERKLASLSEEMSIEKDRILRISADFDNFRKRTERERNSLVTNAQGEVVESLLPVLDNFERAKVQIKVETEGEEKINNSYQSIYKQFIEILTSLGVVPVETVGNPFDPLLHEAIMQEDSEEFEEGVIFQEFRRGFKLGDRLLRPSMVKVSAGPGPAKPEQVVPEEEQDVSDTNGTKEGSSD 336
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M5VQG4 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 347.051 bits (889), Expect = 2.522e-116
Identity = 208/358 (58.10%), Postives = 249/358 (69.55%), Query Frame = 0
 
Query:    5 TVLRTAILGGPQASITNPHHNSFPK--LVSFLMSTRKPI---------WPRSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDADSA-AVED---DGE---TATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKSISVQPSGASEGSADVPEAREEDSAE 344
             VLRT+ LG   A + +    + PK   VSF  S    I         +P  H  S++F  AKF P               AS GE+  T+ VE+     +++D +D A +VED   DGE   T+ +DE   EE+P SAIIASLQ+YKEA+A+ DE+K+AEIE+ LK  EDEK +LE KVASLS E+S E+ RILRISADFENFRKRT+RER SL+TNA+GEVVESLLPV+DNFERAK+QIKVETEGEEKINNSYQSI KQF E+L SLGV+PVET G PFDP+LHEAIMREDS EFEEG+I+ EFRKGFKLGDRLLRPSMVKVSAGPGPAK               VP + E+D++E
Sbjct:    3 NVLRTSPLGATFAQLPSTLSPNSPKPSYVSFRQSQSGSIPYLTLSSLRFP--HLPSLRF--AKFVP--------------LASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSNDDEGDAEEKPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKISLEKKVASLSEELSAEKVRILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNSYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGDRLLRPSMVKVSAGPGPAKP-----------DQQVPPSEEQDASE 331
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4FPM1 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 346.665 bits (888), Expect = 3.498e-116
Identity = 203/332 (61.14%), Postives = 240/332 (72.29%), Query Frame = 0
 
Query:    5 TVLRTAILGGPQASITNPHHNSFPK--LVSFLMSTRKPI---------WPRSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDADSA-AVED---DGE---TATEDETSEEEEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAK 318
             VLRT+ LG   A + +    + PK   VSF  S    I         +P  H  S++F  AKF P               AS GE+  T+ VE+     +++D +D A +VED   DGE   T+ +DE   EE+P SAIIASLQ+YKEA+A+ DE+K+AEIE+ LK  EDEK +LE KVASLS E+S E+ RILRISADFENFRKRT+RER SL+TNA+GEVVESLLPV+DNFERAK+QIKVETEGEEKINNSYQSI KQF E+L SLGV+PVET G PFDP+LHEAIMREDS EFEEG+I+ EFRKGFKLGDRLLRPSMVKVSAGPGPAK
Sbjct:    3 NVLRTSPLGATFAQLPSTLSPNSPKPSYVSFRQSQSGSIPYLTLSSLRFP--HLPSLRF--AKFVP--------------LASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSNDDEGDAEEKPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKISLEKKVASLSEELSAEKVRILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNSYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGDRLLRPSMVKVSAGPGPAK 316
[Close]
BLAST of XM_017394279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A6KIJ5 (GrpE protein homolog {ECO:0000256|RuleBase:RU000640})

HSP 1 Score: 346.665 bits (888), Expect = 3.657e-116
Identity = 188/308 (61.04%), Postives = 228/308 (74.03%), Query Frame = 0
 
Query:   44 RSHFVSIKFNSAKFCPEVLKRHRFGLGSVGFASSGESVETQEVEDEVFDSQLQDDADSAAVEDDGETATEDETSEE-----EEPASAIIASLQVYKEAIANTDEAKIAEIEALLKSFEDEKDALESKVASLSTEISYERDRILRISADFENFRKRTERERFSLLTNAKGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFAEVLGSLGVLPVETTGNPFDPMLHEAIMREDSDEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKSISVQPSGASEGSADVPEAREEDSAEPA 346
            R   +S K +S  F    +K     +  V F+S GE+ +T E ++ + + ++QD +D A   +D  +  ED  S E     E  +S + AS Q YKEA+ + DE+KIAE+EA LKS EDEK  LE KVASL+ E+S E+DR+LRISADF+NFRKRTERER SL+TNA+GEVVESLLP+LDNFERAKSQIK++TEGE KINNSYQSI KQF E+LGSLGVL VET GNPFDP+LHEAIMREDS EFEEGIIL+EFRKGFKLGDRLLRPSMVKVS+GPGPAK   V  SG +E +++      EDS EP 
Sbjct:   40 RHRSISTKLSSTCFLQFAVKSSPGFVKFVPFSSQGET-KTTETQEAIQEPEIQDSSDGALGLEDDVSEVEDSASSEVADPKETSSSIVTASFQSYKEALVSNDESKIAEVEAFLKSVEDEKIDLERKVASLTEELSIEKDRVLRISADFDNFRKRTERERLSLVTNAQGEVVESLLPILDNFERAKSQIKLDTEGEAKINNSYQSIYKQFLEILGSLGVLSVETRGNPFDPLLHEAIMREDSVEFEEGIILEEFRKGFKLGDRLLRPSMVKVSSGPGPAKPQQVGSSGGAETASETT----EDSREPV 342
Match NameStatsDescription
A0A5B7BE25E-Value: 1.014e-121, PID: 61.52GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A251V3A2E-Value: 5.329e-121, PID: 55.62GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A061F7B9E-Value: 1.189e-119, PID: 64.72GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A059A290E-Value: 1.848e-118, PID: 77.78GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A314UZU3E-Value: 1.565e-117, PID: 61.93GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A6P5RXC4E-Value: 2.556e-117, PID: 61.52GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A2P5CZ16E-Value: 8.458e-117, PID: 61.63GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
M5VQG4E-Value: 2.522e-116, PID: 58.10GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A5E4FPM1E-Value: 3.498e-116, PID: 61.14GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
A0A6A6KIJ5E-Value: 3.657e-116, PID: 61.04GrpE protein homolog {ECO:0000256|RuleBase:RU00064... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.