XM_017397807.1

Resource Type: 
Polypeptide
Name: 
XM_017397807.1
Identifier: 
XM_017397807.1-protein
Sequence: 
MTTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFN
NDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLL
RSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINV
FDPKPASARPLLSQKNQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDP
NSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDL
AENGVTVPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYP
SILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKG
EFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAP
PADEDLPVPEF
Sequence Length: 
411
Sequence Checksum: 
ae663e43fb67273955645f63e14bf57c
View location in JBrowse: 
DCARv2_Chr5:10995067..10996302+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017397807.1, derives from mRNA, XM_017397807.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6S7B9 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 291/413 (70.46%), Postives = 341/413 (82.57%), Query Frame = 0
 
Query:    1 MTTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQK--NQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPE 410
            M T   TE +WPEL+GS +W+GLL+PLDLSLR LILRCGDFCQATYD+F ND NSK+ GSSRYGKK FFQKVML NAS YQV CFLYATA++   +A LL SRSREAWDRESNWIGYIATTTDE S +LGRREIYVAWRGT+RDYEWI+VF  +P SA  L   K  ++++      S  DE++   KVM GWLTIY S+DP S FTK SAR QL+SK+  L+++Y+ E +SITF GHSLGA+LS++SAFDL ENGVT +P+SA +FGSPQVG+K FND++ EF N+KILH++NKIDLIPLYPS LLGYVNTG  L IDTRKSP+LKD+K+P DWHNLQ +LH+V+GWNG KGEFELKVKRSLALVNKSSA LKE+YL+P +WWVEKNKGM IDENG+W  AP ADEDLPVPE
Sbjct:    1 MATTAGTEPTWPELLGSNNWEGLLDPLDLSLRKLILRCGDFCQATYDSFVNDANSKFAGSSRYGKKSFFQKVMLENASDYQVYCFLYATAQIGVPEAILLHSRSREAWDRESNWIGYIATTTDEVSKSLGRREIYVAWRGTSRDYEWIDVFSARPESADQLFKPKSWDKKVEANEDDSDEDEEEKATKVMYGWLTIYVSEDPKSSFTKTSARKQLLSKMKTLIEQYKDEKLSITFTGHSLGAALSILSAFDLVENGVTDIPVSAIVFGSPQVGNKAFNDRVLEFPNLKILHVKNKIDLIPLYPSGLLGYVNTGTLLEIDTRKSPHLKDSKNPSDWHNLQAILHVVNGWNGSKGEFELKVKRSLALVNKSSAFLKEDYLVPETWWVEKNKGMVIDENGDWILAPLADEDLPVPE 413
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068V7Q5 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0
Identity = 291/413 (70.46%), Postives = 341/413 (82.57%), Query Frame = 0
 
Query:    1 MTTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQK--NQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPE 410
            M T   TE +W EL+GS +W+GLL+PLDLSLR+LILRCGDFCQATYD+F ND NSK+ GSSRYGKK FFQKVML NAS YQV CFLYATA++   +A LL +RSREAWDRESNWIGYIATTTDE S +LGRREIYVAWRGT+RDYEWI+VF  +P SA  L   K  ++++      S  DE++   KVM GWLTIY S+DP S FTK SAR QL+SK+  L+++Y+ E +SITF GHSLGA+LS++SAFDL ENGVT +P+SA +FGSPQVG+K FND++ EF N+KILH++NKIDLIPLYPS LLGYVNTG  L IDTRKSP+LKD+K+P DWHNLQ +LH+V+GWNG KGEFELKVKRSLALVNKSSA LKEEYL P +WWVEKNKGM IDENG+W  APPADEDLPVPE
Sbjct:    1 MATTAGTEPTWLELLGSNNWEGLLDPLDLSLRNLILRCGDFCQATYDSFVNDANSKFAGSSRYGKKSFFQKVMLENASDYQVYCFLYATAQIGVPEAILLHTRSREAWDRESNWIGYIATTTDEVSKSLGRREIYVAWRGTSRDYEWIDVFSARPESADQLFKPKSWDKKVEANEDDSDEDEEEKATKVMYGWLTIYVSEDPKSSFTKTSARKQLLSKMKTLIEQYKDEKLSITFTGHSLGAALSILSAFDLVENGVTDIPVSAIVFGSPQVGNKAFNDRVLEFPNLKILHVKNKIDLIPLYPSGLLGYVNTGTLLEIDTRKSPHLKDSKNPSDWHNLQAILHVVNGWNGSKGEFELKVKRSLALVNKSSAFLKEEYLAPETWWVEKNKGMVIDENGDWILAPPADEDLPVPE 413
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6SGI6 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 291/413 (70.46%), Postives = 340/413 (82.32%), Query Frame = 0
 
Query:    1 MTTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQK--NQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPE 410
            M T   TE +W EL+GS +W+GLL+PLDLSLR LILRCGDFCQATYD+F ND NSK+ GSSRYGKK FFQKVML NAS YQV CFLYATA++   +A LL SRSREAWDRESNWIGYIATTTDE S +LGRREIYVAWRGT+RDYEWI+VF  +P SA  L   K  ++++      S  DE++   KVM GWLTIY S+DP S FTK SAR QL+SK+  L+++Y+ E +SITF GHSLGA+LS++SAFDL ENGVT +P+SA +FGSPQVG+K FND++ EF N+KILH++NKIDLIPLYPS LLGYVNTG  L I+TRKSP+LKD+K+P DWHNLQ +LH+V+GWNG KGEFELKVKRSLALVNKSSA LKEEYL P +WWVEKNKGM IDENG+W  APPADEDLPVPE
Sbjct:    1 MATTAGTEPTWLELLGSNNWEGLLDPLDLSLRKLILRCGDFCQATYDSFVNDANSKFAGSSRYGKKTFFQKVMLENASDYQVYCFLYATAQIGVPEAILLHSRSREAWDRESNWIGYIATTTDEVSKSLGRREIYVAWRGTSRDYEWIDVFSARPESADQLFKPKSWDKKVEANEDDSDEDEEEKATKVMYGWLTIYVSEDPKSSFTKTSARKQLLSKMKTLIEQYKDEKLSITFTGHSLGAALSILSAFDLVENGVTDIPVSAIVFGSPQVGNKAFNDRVLEFPNLKILHVKNKIDLIPLYPSGLLGYVNTGTLLEINTRKSPHLKDSKNPSDWHNLQAILHVVNGWNGSKGEFELKVKRSLALVNKSSAFLKEEYLAPETWWVEKNKGMVIDENGDWILAPPADEDLPVPE 413
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A022RL19 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0
Identity = 287/413 (69.49%), Postives = 346/413 (83.78%), Query Frame = 0
 
Query:    2 TTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQKN--QELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGV-TVPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPEF 411
            TT+T +E +W EL+GS +W+ LL+PLDLSLR LILRCGDFCQATYDAFNND NSK+ G+SRYGKK FF KVML +A+ YQV CFLYATAKV +G+A  L S SRE+WDRESNWIGYIATT+DE S + GRREIYV WRGTTR+YEW+NV   +P SA+ LL  KN  ++    N S   D+D+ +P+VM GWLTIY S DPNS FTKLSAR QL+ KI Q+ ++Y+ E++SIT  GHSLGASL+++SAFDL ENGV  +P+SA +FGSPQVG+K FND++ +FAN+K+LH+RNKIDLIPLYPS LLGY NTG+EL++D RKSP+LKD+KSPGDWHNLQ +LH+V GWNGD GEFELKVKRSLALVNKSSAILK+EYLIPGSWW+EKNKG+ +DE+GEW  APP+DED PVPEF
Sbjct:    7 TTRT-SEPTWAELLGSNNWETLLDPLDLSLRRLILRCGDFCQATYDAFNNDVNSKFTGTSRYGKKSFFDKVMLDSAANYQVHCFLYATAKVGTGEALFLHSLSRESWDRESNWIGYIATTSDELSRSSGRREIYVVWRGTTRNYEWVNVLGARPESAQELLRPKNWDKKTPDDNDSDDDDDDEGVPRVMNGWLTIYMSTDPNSSFTKLSARTQLLKKIEQIREQYKDESLSITLTGHSLGASLAILSAFDLVENGVDNIPVSAIVFGSPQVGNKAFNDRVLDFANLKVLHVRNKIDLIPLYPSGLLGYRNTGIELVVDGRKSPSLKDSKSPGDWHNLQAILHVVAGWNGDDGEFELKVKRSLALVNKSSAILKDEYLIPGSWWIEKNKGLVLDEDGEWVLAPPSDEDQPVPEF 418
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BTY5 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 598.971 bits (1543), Expect = 0.000e+0
Identity = 288/417 (69.06%), Postives = 342/417 (82.01%), Query Frame = 0
 
Query:    1 MTTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPL-----LSQKNQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPEF 411
            M T   TE +WPEL+GS +W+GLL PLDL+LR LILRCGDFCQATYDAFNND+NSKYCGSSRYGK  FF KVML +AS YQ+  FLYATA+VS  +AFLL S SRE+WDRESNWIGYIA TTDE S ALGRREIYVAWRGTTR+YEWI++   K  SA PL     L Q  ++ S  +AS S ++++ +PKVM GW+T+Y S DP S FTK SAR QL++KI +LL +Y+ E +SITF GHSLGASLSV++AFD+ ENGV+ +P+SAF+FG PQVG++ F++KLK+F N+KILHIRN+IDLIP YPS LLGYVN+G+EL+IDTRKSP+LKD+K+P DWHNLQ MLH+VDGWNG  GEFELKV RSLALVNKSS  LK+E LIPGSWWVEKN+GM  DE G W  APPADEDLPVPE+
Sbjct:    1 MGTTQSTEPTWPELLGSNNWEGLLEPLDLNLRRLILRCGDFCQATYDAFNNDQNSKYCGSSRYGKNSFFHKVMLDSASHYQLTSFLYATARVSVHEAFLLHSLSRESWDRESNWIGYIAVTTDEVSQALGRREIYVAWRGTTRNYEWIDILGAKLESAEPLLRPKTLRQSEEKNSSSSASDSDEDNEKVPKVMLGWITVYTSVDPKSPFTKASARTQLLTKINELLNQYKDEKLSITFTGHSLGASLSVLAAFDIVENGVSDIPVSAFVFGLPQVGNRAFDEKLKQFPNLKILHIRNEIDLIPHYPSHLLGYVNSGIELVIDTRKSPSLKDSKNPSDWHNLQGMLHVVDGWNGAHGEFELKVGRSLALVNKSSEFLKDECLIPGSWWVEKNRGMVRDEQGNWVLAPPADEDLPVPEY 417
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1L6G7 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 294/453 (64.90%), Postives = 339/453 (74.83%), Query Frame = 0
 
Query:    2 TTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLT-NASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQKNQELSGGNASS--------SSDEDDDLP----------------------------------KVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVTVPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPEF 411
            T  TQ+ T W EL+GS +W+GLL+P D++LR LILRCGDFCQATYDAFNNDENSKY GSSRYGKK FF KVML  +   Y++A F+YATA+VS  +AFL +S SREAWDRESNWIGYIA T+D+ S  LGRREIYV WRGT+RD+EWINVF  K ASA PLL  +   LS     +        SSDEDD +P                                  KVMQGWLTIY SDDPNS FTK SAR Q+++ I QL+ KYE E+VSI   GHSLGASLS++SAFDLAENG+TVPISAF+FGSPQVG+K FND+L EF NVK+LHIRNKIDLIPLYPS LLGYVNTGV+ LIDTRKSP+LKD+ + GDWHNLQ MLH+V GWNG  GEFEL+VKRSL LVNKSS  LK+EYLIPGSWW+EKNKG+ +D NGEW   PP +ED+PVPEF
Sbjct:    4 TNITQSTTPWLELLGSNNWEGLLDPFDINLRTLILRCGDFCQATYDAFNNDENSKYAGSSRYGKKSFFHKVMLQPSPDDYEIAAFIYATARVSVPEAFLFKSLSREAWDRESNWIGYIAVTSDKVSKKLGRREIYVVWRGTSRDFEWINVFGAKSASAEPLLRARTLSLSTTGTGNGTTTTLTDSSDEDDTIPFIDSLALRIDGISWLRWLVPLITYFAKAKDGPTPKVMQGWLTIYTSDDPNSSFTKTSARTQVLTTIRQLVSKYENEDVSIIQTGHSLGASLSILSAFDLAENGITVPISAFVFGSPQVGNKAFNDRLSEFTNVKVLHIRNKIDLIPLYPSGLLGYVNTGVDFLIDTRKSPSLKDSNNTGDWHNLQGMLHVVAGWNGADGEFELRVKRSLTLVNKSSEFLKDEYLIPGSWWIEKNKGVILDANGEWVLEPPDEEDIPVPEF 456
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9HZF5 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0
Identity = 283/415 (68.19%), Postives = 341/415 (82.17%), Query Frame = 0
 
Query:    2 TTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQKNQELSGGN----ASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGV-TVPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPEF 411
            TT T+ E +WPEL+GSK+W GLLNPL+L+LR LILRCGDFCQATYDAFNND+NSKY GSSRYGKK FFQKV+L +A+ Y+V CFLYATAKV   +A +L S+SRE+WDRESNWIGYIA TTDE S ALGRREIYV WRGTTR+YEWI+VF  +P SA+ L+  +N E    N    +SS  D+D+ +PKVM GWLTIY S+DPNS FTKLSAR QL  KI +L + Y  EN+SIT  GHSLGA L+++SAFDL ENGV  +P++A +FGSPQVG++ F +++ +F+N+KILHI+NKIDLIP YPS LLGY + G EL+ID RKSP+LK + +P DWHNL+ MLH+V GWNGD+GEFELKVKRSLALVNKSS +LK+EYLIPGSWW+EKNKGM +DENGEW  APP+DED PVPEF
Sbjct:    6 TTSTEEEPTWPELLGSKNWDGLLNPLNLTLRRLILRCGDFCQATYDAFNNDQNSKYAGSSRYGKKSFFQKVILESAADYEVYCFLYATAKVGIAEALVLHSQSRESWDRESNWIGYIAVTTDEVSRALGRREIYVVWRGTTRNYEWIDVFGARPESAQRLVRPRNWERKTENSDSSSSSDEDDDEKVPKVMNGWLTIYVSEDPNSPFTKLSARTQLQRKILELREIYNNENLSITVTGHSLGACLAILSAFDLVENGVDDIPVAAIVFGSPQVGNRTFRERVLQFSNLKILHIKNKIDLIPHYPSALLGYRSLGTELVIDNRKSPSLKHSHNPSDWHNLEAMLHVVAGWNGDEGEFELKVKRSLALVNKSSEVLKDEYLIPGSWWIEKNKGMVVDENGEWILAPPSDEDQPVPEF 420
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1BTN2 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 593.578 bits (1529), Expect = 0.000e+0
Identity = 276/408 (67.65%), Postives = 334/408 (81.86%), Query Frame = 0
 
Query:    7 TETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLL---SQKNQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPE 410
            TE +W EL+GS +W+GLL PL L+LR LILRCGDFCQAT+DAFNNDE S YCGSSRYGK  FF KVM  +AS YQ+  FLYATA+V + +AF L S SRE+WDRESNWIGYIA T DE S  LGRREIY+A+RGTTR+YEW+NV    P SA PLL   S    +  G N  S+S++D++ P+VM GWL IY S DP S +T+LSARAQL + I  L  +Y+ EN+SITF GHSLGA+LS+++AFDL ENGVT +P+SA IFGSPQVG++ FNDKLKEF N+KILH++NKID+IPLYPS LLGYVN+G+EL+IDTRKSP+LKD+K+P DWHNLQ MLHI+ GWNG+ GEFE+KVKRSLALVNKSS+ILK++ LIPGSWWVEKNKG+ +DE+GEW  APP DED+P+PE
Sbjct:    3 TEPTWHELLGSNNWEGLLEPLHLNLRRLILRCGDFCQATHDAFNNDEYSMYCGSSRYGKSSFFHKVMFKSASDYQIVSFLYATARVGAHKAFFLHSLSRESWDRESNWIGYIAVTNDEMSEQLGRREIYIAFRGTTRNYEWVNVLSALPESAEPLLHPQSLNKPDPDGDNGGSNSNDDENAPRVMNGWLKIYISSDPKSPYTRLSARAQLQTMIEDLRDRYKDENLSITFTGHSLGATLSILAAFDLVENGVTDIPVSAIIFGSPQVGNRAFNDKLKEFPNLKILHVKNKIDVIPLYPSSLLGYVNSGIELVIDTRKSPSLKDSKNPSDWHNLQAMLHIIAGWNGENGEFEMKVKRSLALVNKSSSILKDDILIPGSWWVEKNKGVVLDEDGEWILAPPLDEDIPIPE 410
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6MX34 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 283/416 (68.03%), Postives = 333/416 (80.05%), Query Frame = 0
 
Query:    1 MTTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVML-TNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQKNQELSGGNASSS---SDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPEF 411
            M    ++ET WPEL+G+ +W+GLL PLD+ LR LILRCGDFCQATYDAFNND+NSKY GSSRYGKK FF KVML  + S Y+V  F+YATAK+S  +AF L S SREAWDRESNW+GYIATTTDE S  LGRREIYVAWRGT+RD EWINV     ASA PLL QK    S  + +S+   SDED+ +PKVMQGWL IY SD+PNS FTKLSAR Q++  I QL+KKYE E++SI   GHSLGASLS++SAFDLAENG+T +P+SAF+FGSPQVG++ FND+L +F NVKILHIRNKIDLI  YPS LLGYV++G+   IDTRKS +LK + +  DWHNLQ MLH+V GWNGD GEFELKV RSLALVNKSS  LK+EYLIPGSWWVEKNKG+  +ENG+W   PP +ED+PVPE+
Sbjct:    1 MEYAIESETPWPELLGANNWEGLLEPLDIKLRTLILRCGDFCQATYDAFNNDKNSKYAGSSRYGKKSFFHKVMLHPSPSDYEVCMFIYATAKISIAEAFFLHSLSREAWDRESNWVGYIATTTDEVSQNLGRREIYVAWRGTSRDLEWINVLGAISASAEPLLRQKTFSPSTADPTSNDSDSDEDEGIPKVMQGWLKIYTSDNPNSSFTKLSARTQVLKGIQQLVKKYENEDISIIITGHSLGASLSILSAFDLAENGITNIPVSAFVFGSPQVGNQAFNDRLNQFPNVKILHIRNKIDLITRYPSRLLGYVDSGINFEIDTRKSGSLKKSNNTADWHNLQGMLHVVAGWNGDNGEFELKVPRSLALVNKSSEFLKDEYLIPGSWWVEKNKGLIKNENGDWVLEPPDEEDIPVPEY 416
[Close]
BLAST of XM_017397807.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067F7R6 (Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (3.1.1.- {ECO:0000256|RuleBase:RU367093}))

HSP 1 Score: 585.874 bits (1509), Expect = 0.000e+0
Identity = 280/414 (67.63%), Postives = 338/414 (81.64%), Query Frame = 0
 
Query:    2 TTQTQTETSWPELMGSKDWQGLLNPLDLSLRHLILRCGDFCQATYDAFNNDENSKYCGSSRYGKKDFFQKVMLTNASQYQVACFLYATAKVSSGQAFLLRSRSREAWDRESNWIGYIATTTDEASAALGRREIYVAWRGTTRDYEWINVFDPKPASARPLLSQ---KNQELSGGNASSSSDEDDDLPKVMQGWLTIYNSDDPNSQFTKLSARAQLMSKITQLLKKYEGENVSITFAGHSLGASLSVVSAFDLAENGVT-VPISAFIFGSPQVGDKRFNDKLKEFANVKILHIRNKIDLIPLYPSILLGYVNTGVELLIDTRKSPNLKDTKSPGDWHNLQTMLHIVDGWNGDKGEFELKVKRSLALVNKSSAILKEEYLIPGSWWVEKNKGMTIDENGEWGFAPPADEDLPVPEF 411
            T   + +  WPEL+GS +W GLL+PLDLSLR L+LRCGDF QATYDAFNND+NSKYCG+SRYGK+ FF KVML NA  YQV  FLY TA+VS  +AFL+ S SRE+WDRESNWIGYIA T+DE   A+GRREIYVAWRGTTR+YEW+NV   + AS   +L++   + +E +  ++SS  D+D+ +PKVMQGWLTIY S+DPNS FTKLSARAQL+SKI +L ++Y+GE +S+ F GHSLGASLS++SAFDLAENGVT +P++AF+FG PQVG+K FN++LK + NVK+LH+RN IDLI  YP  LLGYVNTG EL+IDTRKSP+LK++ +P DWHNLQ MLH+V GWNGD GEFELKVKRSLALVNKS   LK+E L+PGSW VEKNKGM  DE+GEW  APP DEDLPVPEF
Sbjct:    3 TDDAEEQAPWPELLGSNNWNGLLDPLDLSLRKLVLRCGDFIQATYDAFNNDQNSKYCGTSRYGKRAFFDKVMLQNAPDYQVFSFLYGTARVSLPEAFLVHSLSRESWDRESNWIGYIAVTSDERLKAIGRREIYVAWRGTTRNYEWVNVLGAQQASVGSILNKSKFRVEEKNDTDSSSDCDDDETVPKVMQGWLTIYTSEDPNSSFTKLSARAQLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFGCPQVGNKAFNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSPSLKESVNPSDWHNLQAMLHVVAGWNGDDGEFELKVKRSLALVNKSCEFLKDELLVPGSWCVEKNKGMVRDEDGEWVLAPPTDEDLPVPEF 416
Match NameStatsDescription
A0A6P6S7B9E-Value: 0.000e+0, PID: 70.46Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A068V7Q5E-Value: 0.000e+0, PID: 70.46Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A6P6SGI6E-Value: 0.000e+0, PID: 70.46Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A022RL19E-Value: 0.000e+0, PID: 69.49Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A5B7BTY5E-Value: 0.000e+0, PID: 69.06Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A2U1L6G7E-Value: 0.000e+0, PID: 64.90Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A2G9HZF5E-Value: 0.000e+0, PID: 68.19Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
M1BTN2E-Value: 0.000e+0, PID: 67.65Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A5N6MX34E-Value: 0.000e+0, PID: 68.03Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
A0A067F7R6E-Value: 0.000e+0, PID: 67.63Phospholipase A1 {ECO:0000256|RuleBase:RU367093} (... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.