Resource Type:
Polypeptide
Name:
XM_017393210.1
Identifier:
XM_017393210.1-protein
Sequence:
MSTADVNGNEDYVTQPLLLHRSPSNLTSQVAIVGSNLCPIESLDYEINEN
ELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGM
KFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPE
VKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIA
AITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGV
LFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGL
IMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINE
KGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNY
KKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCF
FLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGS
ASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIY
DLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLK
TTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISA
FKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVES
MSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPM
LSSSRWRRLRINFSQTDRRV
Sequence Length:
770
Sequence Checksum:
2bedd7db57ea319a6e967c2a9677506a
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017393210.1, derives from mRNA, XM_017393210.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7T4W0 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1259.2 bits (3257), Expect = 0.000e+0
Identity = 615/766 (80.29%), Postives = 686/766 (89.56%), Query Frame = 0
Match: D7T4W0 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1259.2 bits (3257), Expect = 0.000e+0
Identity = 615/766 (80.29%), Postives = 686/766 (89.56%), Query Frame = 0
Query: 3 TADVNGNEDYVTQPLL---LHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQ 765
+A N +E+ QPLL LHRS SN+TSQVAIVGSN+CPIESLDYEI EN+ FK+DWRSRGKVQ QY+F+KW+LC LIG IVS I FCNNLAVENLAG+KFV+TSNMML +++ AF VF +SNF LTLFA +ITAFIAP AAGSGIPEVKAYLNGVDAP IF+LKTLLVKIVGSI AVSSSL +GKAGPMVHTGAC+AA+ GQGGS+KY LTWRWLRYFKNDRDRRD VTCGSAAG+AA+FRAPVGGVLF+LEEMASWWRSAL+WR FFTTAVVAI+LRALID+CLSG+CGLFGTGGLIM+DVTS N TYH+ DVPPVL+LGVIGG+LGSLYN++LEKVLR+Y+ I K YKI+LACSIS+ TSCLLFGLPWLASCQPCP DASE CPTIGRSGNYKKFQC PGHYNDLASL FNTNDDAIKNLFSKDTD+EFQ++SI++FF TCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLG+AS LGGSMRMTVSLCVIILELTNNLLLLPLIM+VLL+SKTVADAF+ N+YD+IMKLKGFPYLE HAEPYMRQLTV DVVTGPLQLF+ IEKV NIVHVL+TTGH+GFPVIDE SESPVLFGL+LRAHL+ LL+KKAFL T VR D AF+HFSA DF K+G D IE+I+LT EEMEM+IDLHP+ N+SPYTVVE+MSLAKALILFREVGLRHL+VIPKIS + PVVGILTRHDFMPEHILG+HP+L SRW+R+R +
Sbjct: 2 SAQPNADEESQAQPLLDPSLHRSLSNVTSQVAIVGSNVCPIESLDYEIYENDFFKQDWRSRGKVQIFQYIFVKWLLCFLIGLIVSLIGFCNNLAVENLAGVKFVITSNMMLVKRYGMAFLVFFSSNFVLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFTLKTLLVKIVGSITAVSSSLLIGKAGPMVHTGACVAALLGQGGSRKYGLTWRWLRYFKNDRDRRDFVTCGSAAGIAASFRAPVGGVLFSLEEMASWWRSALLWRCFFTTAVVAIMLRALIDVCLSGKCGLFGTGGLIMFDVTSQNTTYHIKDVPPVLVLGVIGGLLGSLYNFLLEKVLRIYSYIYGKKPIYKIILACSISVFTSCLLFGLPWLASCQPCPIDASEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKDTDSEFQYSSILIFFATCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGAASLLGGSMRMTVSLCVIILELTNNLLLLPLIMVVLLVSKTVADAFNGNVYDIIMKLKGFPYLEAHAEPYMRQLTVEDVVTGPLQLFNVIEKVENIVHVLRTTGHHGFPVIDERSHSESPVLFGLVLRAHLIVLLRKKAFLTTAVRADSDAFRHFSAMDFTKRGSGNGDKIEDIELTEEEMEMFIDLHPFCNSSPYTVVETMSLAKALILFREVGLRHLLVIPKISNRSPVVGILTRHDFMPEHILGVHPLLVRSRWKRIRFQLPR 767
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2K1ZXS8 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1253.04 bits (3241), Expect = 0.000e+0
Identity = 608/759 (80.11%), Postives = 683/759 (89.99%), Query Frame = 0
Match: A0A2K1ZXS8 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1253.04 bits (3241), Expect = 0.000e+0
Identity = 608/759 (80.11%), Postives = 683/759 (89.99%), Query Frame = 0
Query: 5 DVNGNEDYVTQPLLL-HRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRIN 762
+ N +++ + PLL RS N TSQVAIVG+N+CPIESLDYEI ENE FK+DWRSRGK+Q QYVFMKW LC LIG IVS I F NNLAVEN+AG+KFVVTSNMMLA++F AF VF+ SN LTLFA +ITAFIAP AAGSGIPEVKAYLNGVDAP IFSL++L++KI+GSI+AVSSSL VGKAGPMVHTGAC+AA+ GQGGSK++KLTWRWLR+FKNDRDRRDLVTCGSAAG+AAAFRAPVGGVLFALEEMASWWRSAL+WR+FFTTAVVAIVLRALID+CLSG+CGLFG GGLIM+DV SA+VTYHL DVPPV LGVIGGILGSLYN++L+KVLR+YNLINEKG+ YKILLAC+ISI TSCLLFGLPWLASCQPCP+DASE CPTIGRSGN+KKFQC PG YNDLASL FNTNDD++KNLFS+DT++EFQ++SI++FF+TCFFLSIFSYGIVAPAGLF+PVIVTGASYGRFVGMLVGSHSNL+HGL+AVLG+ASFLGGSMRMTVSLCVIILELTNNLL+LPLIM+VLLISKTVADAF+ NIYDLIM KGFPYLE H EPYMRQLTVG+VV GPLQ+F GIEKVG IVHVL+TT HNGFPVIDE P SESPVL+GLILRAHL+ LLKKKAF+ TPV T AFK F A DFAK+G D IE+++ T EEMEM++DLHP+TNASPYTV E+MSLAKALILFREVGLRHL+VIPKISG+ PVVGILTRHDFMP HILGLHPML SRW+RLRI
Sbjct: 9 EANTDQESLIIPLLSPRRSLINSTSQVAIVGANVCPIESLDYEIAENEFFKQDWRSRGKMQIFQYVFMKWSLCFLIGLIVSLIGFFNNLAVENIAGLKFVVTSNMMLAKRFGMAFLVFSVSNLILTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFSLRSLVIKIIGSISAVSSSLFVGKAGPMVHTGACVAALLGQGGSKRFKLTWRWLRFFKNDRDRRDLVTCGSAAGIAAAFRAPVGGVLFALEEMASWWRSALLWRAFFTTAVVAIVLRALIDVCLSGKCGLFGKGGLIMFDVYSASVTYHLIDVPPVFALGVIGGILGSLYNFLLDKVLRIYNLINEKGVVYKILLACAISIFTSCLLFGLPWLASCQPCPSDASEACPTIGRSGNFKKFQCPPGQYNDLASLIFNTNDDSVKNLFSQDTNSEFQYSSILIFFVTCFFLSIFSYGIVAPAGLFIPVIVTGASYGRFVGMLVGSHSNLDHGLYAVLGAASFLGGSMRMTVSLCVIILELTNNLLMLPLIMLVLLISKTVADAFNGNIYDLIMNAKGFPYLEAHTEPYMRQLTVGEVVRGPLQIFQGIEKVGKIVHVLRTTRHNGFPVIDEPPLSESPVLYGLILRAHLIELLKKKAFVPTPVPTGTDAFKLFFAGDFAKRGSGNGDKIEDLQFTEEEMEMFLDLHPFTNASPYTVAETMSLAKALILFREVGLRHLLVIPKISGRSPVVGILTRHDFMPGHILGLHPMLIRSRWKRLRIQ 767
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: E2GMA5 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1247.26 bits (3226), Expect = 0.000e+0
Identity = 612/766 (79.90%), Postives = 684/766 (89.30%), Query Frame = 0
Match: E2GMA5 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1247.26 bits (3226), Expect = 0.000e+0
Identity = 612/766 (79.90%), Postives = 684/766 (89.30%), Query Frame = 0
Query: 3 TADVNGNEDYVTQPLL---LHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQ 765
+A N +E+ QPLL LHRS SN+TSQVAIVGSN+CPIESLDYEI EN+ FK+DWRSRGKVQ QY+F+KW+LC LIG IVS I FCNNLAVENLAG+KFV+TSNMML +++ AF VF +SNF LTLFA +ITAFIAP AAGSGIPEVKAYLNGVDAP IF+LKTLLVKIVGSI AVSSSL +GKAGPMVHTGAC+AA+ GQGGS+KY LTWRWLRYFKNDRDRRD VTCGSAAG+AA+FRAPVGGVLF+LEEMASW+ AL+WR FFTTAVVAI+LRALID+CLSG+CGLFGTGGLIM+DVTS N TYH+ DVPPVL+LGVIGG+LGSLYN++LEKVLR+Y+ I K YKI+LACSIS+ TSCLLFGLPWLASCQPCP DASE CPTIGRSGNYKKFQC PGHYNDLASL FNTNDDAIKNLFSKDTD+EFQ++SI++FF TCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLG+AS LGGSMRMTVSLCVIILELTNNLLLLPLIM+VLL+SKTVADAF+ N+YD+IMKLKGFPYLE HAEPYMRQLTV DVVTGPLQLF+ IEKV NIVHVL+TTGH+GFPVIDE SESPVLFGL+LRAHL+ LL+KKAFL T VR D AF+HFSA DF K+G D IE+I+LT EEMEM+IDLHP+ N+SPYTVVE+MSLAKALILFREVGLRHL+VIPKIS + PVVGILTRHDFMPEHILG+HP+L SRW+R+R +
Sbjct: 2 SAQPNADEESQAQPLLDPSLHRSLSNVTSQVAIVGSNVCPIESLDYEIYENDFFKQDWRSRGKVQIFQYIFVKWLLCFLIGLIVSLIGFCNNLAVENLAGVKFVITSNMMLVKRYGMAFLVFFSSNFVLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFTLKTLLVKIVGSITAVSSSLLIGKAGPMVHTGACVAALLGQGGSRKYGLTWRWLRYFKNDRDRRDFVTCGSAAGIAASFRAPVGGVLFSLEEMASWY--ALLWRCFFTTAVVAIMLRALIDVCLSGKCGLFGTGGLIMFDVTSQNTTYHIKDVPPVLVLGVIGGLLGSLYNFLLEKVLRIYSYIYGKKPIYKIILACSISVFTSCLLFGLPWLASCQPCPIDASEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKDTDSEFQYSSILIFFATCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGAASLLGGSMRMTVSLCVIILELTNNLLLLPLIMVVLLVSKTVADAFNGNVYDIIMKLKGFPYLEAHAEPYMRQLTVEDVVTGPLQLFNVIEKVENIVHVLRTTGHHGFPVIDERSHSESPVLFGLVLRAHLIVLLRKKAFLTTAVRADSDAFRHFSAMDFTKRGSGNGDKIEDIELTEEEMEMFIDLHPFCNSSPYTVVETMSLAKALILFREVGLRHLLVIPKISNRSPVVGILTRHDFMPEHILGVHPLLVRSRWKRIRFQLPR 765
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZLG9 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1247.26 bits (3226), Expect = 0.000e+0
Identity = 629/763 (82.44%), Postives = 693/763 (90.83%), Query Frame = 0
Match: A0A5B6ZLG9 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1247.26 bits (3226), Expect = 0.000e+0
Identity = 629/763 (82.44%), Postives = 693/763 (90.83%), Query Frame = 0
Query: 9 NEDYVTQPLL---LHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQTDR 768
+E+ +T PLL LH S SN SQVAIVG+N+CPIESLDYEI EN+ FK+DWRS G +Q QY+FMKW LC LIGFIVS + F NNLAVEN+AGMKFVVTSNMMLA K+ +AF VF ASNFGLTLFA +ITAFI+PEAAGSGIPEVKAYLNGVDAP IFSL+TL+VKI GSI+AVSSSL VGKAGP+VHTGAC+AAI GQGGSKKY+LTWRWLR+FKNDRDRRDLVTCGSAAG+AAAFRAPVGGVLFALEEMASWWRSAL+WR+FFT AVVAIVLRALID+CL G+CGLFGTGGLIM+DVTS NVTYHL DVPPVLLLGVIGGI GSLYN+ILEKVLR+Y+LINEKG Y+ILLACSISI TSCLLFGLPWLASC+ CPADA+EPCPTIG+SGNYKKFQC PGHYNDLASL FNTNDDAI+NLFSK+TD EF ++++ FF+TCFFLSIFSYGIV PAGLFVPVIVTGASYGRFVGML+GSHSNLNHGLFAVLGSAS LGGSMRMTVSLCVIILELTNNLLLLPLIM+VLL+SKTVADAF+ NIYD IMKLKGFPYLE HA+PYMRQLTVGDVV GPLQLFHGIEKV NIVHVLKTT HNGFPVIDE+P SESPVLFGLILRAHL+TLLKKKAFLL PVR I AFK FSA+DFAKKGL DNIE+I+LT EEMEM+IDLHP+TN SPYTVVE+MSLAKALILFR+VGLRHL+VIPKIS + PVVGILTRHDFMPEHILGL+P+L +SRW++LRI F D+
Sbjct: 13 DEESLTHPLLTRPLHPSTSNTMSQVAIVGANVCPIESLDYEIVENDPFKQDWRSHGCIQICQYIFMKWTLCFLIGFIVSLVGFFNNLAVENIAGMKFVVTSNMMLANKYLAAFLVFLASNFGLTLFAIVITAFISPEAAGSGIPEVKAYLNGVDAPGIFSLRTLIVKIAGSISAVSSSLLVGKAGPLVHTGACVAAIMGQGGSKKYRLTWRWLRFFKNDRDRRDLVTCGSAAGIAAAFRAPVGGVLFALEEMASWWRSALLWRAFFTAAVVAIVLRALIDVCLRGQCGLFGTGGLIMFDVTSENVTYHLKDVPPVLLLGVIGGIFGSLYNFILEKVLRIYSLINEKGTGYRILLACSISIFTSCLLFGLPWLASCRSCPADATEPCPTIGQSGNYKKFQCSPGHYNDLASLIFNTNDDAIRNLFSKNTDTEFHRSTMLAFFVTCFFLSIFSYGIVVPAGLFVPVIVTGASYGRFVGMLIGSHSNLNHGLFAVLGSASLLGGSMRMTVSLCVIILELTNNLLLLPLIMLVLLVSKTVADAFNGNIYDHIMKLKGFPYLEAHADPYMRQLTVGDVVMGPLQLFHGIEKVSNIVHVLKTTRHNGFPVIDESP-SESPVLFGLILRAHLITLLKKKAFLLAPVRAGIDAFKQFSADDFAKKGLGNGDNIEDIELTNEEMEMFIDLHPFTNTSPYTVVETMSLAKALILFRQVGLRHLLVIPKISNRSPVVGILTRHDFMPEHILGLYPLLVNSRWKKLRIRFPHLDK 774
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0FLU6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1246.11 bits (3223), Expect = 0.000e+0
Identity = 612/762 (80.31%), Postives = 681/762 (89.37%), Query Frame = 0
Match: A0A7J0FLU6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1246.11 bits (3223), Expect = 0.000e+0
Identity = 612/762 (80.31%), Postives = 681/762 (89.37%), Query Frame = 0
Query: 7 NGNEDYVTQPLLLHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQTDR 768
N +E+ VT PLLL RS SN TSQVAIVGSNLCPIESLDYEI EN+ FK+DWR+R K Q QY+FMKW LC L+G +VS + F NNLAVEN+AG+KFVVTSNMMLA K+ AF VF A+NFGLTLFA LITA+I+PEAAGSGIPEVKAYLNGVDAP IFSL+TL+VKIVGSI+AVSSSLH+GKAGPMVHTGAC+AA+ GQGGSKKY+LTWRWL+YFKNDRDRRDLVTCGSAAGMAAAFR+PVGGVLFALEEMASWWR AL+WR+FFTTAVVAIVLRA ID C +G+CGLFGTGGLIM+DVTSAN++YHL DVPPV LLG+IGGILGSLYN+IL+KV+R+Y +INEKG AYKILLACSISI TS LLFGLPWLASCQ CPADASE CPTIGRSGNYKKFQC PGHYNDLASL FNTNDDAIKNLFSK+TD+EF +SI++FF+TCFFLSIFSYGIVAP GLFVPVI+TGASYGR VGML+GS SNLNHGLFAVLGSAS LGGSMRMTVSLCV+ILE TNNLLLLPLIM+VLL+SKTV D F+ NIYDLIMKLKG PYLE HAEPYMRQLTV DVVTGPLQLFHGIEKV N+VHVL+TT HNGFPVIDE P +E PVLFGL+LRAHL+TLLKKKAFL T V T I AF F+A DFAK+GL D IE+I LT EEMEM++DLHP+TNASPYTVVE+MSLAKALILFREVGLRH++VIPKIS + PVVGILTRHDFMPEHILG+HP L SRW++LRI F ++
Sbjct: 4 NADEESVTHPLLLLRSTSNTTSQVAIVGSNLCPIESLDYEIIENDFFKQDWRTRSKTQICQYLFMKWTLCFLVGIVVSLVGFTNNLAVENIAGIKFVVTSNMMLANKYLVAFVVFTAANFGLTLFASLITAYISPEAAGSGIPEVKAYLNGVDAPGIFSLRTLVVKIVGSISAVSSSLHIGKAGPMVHTGACVAALMGQGGSKKYRLTWRWLQYFKNDRDRRDLVTCGSAAGMAAAFRSPVGGVLFALEEMASWWRGALLWRAFFTTAVVAIVLRAFIDFCFTGKCGLFGTGGLIMFDVTSANISYHLEDVPPVFLLGIIGGILGSLYNFILDKVIRIYAIINEKGAAYKILLACSISIFTSGLLFGLPWLASCQACPADASEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKNTDSEFHWSSILIFFVTCFFLSIFSYGIVAPTGLFVPVILTGASYGRLVGMLIGSRSNLNHGLFAVLGSASLLGGSMRMTVSLCVVILEFTNNLLLLPLIMLVLLVSKTVGDVFNGNIYDLIMKLKGLPYLEAHAEPYMRQLTVSDVVTGPLQLFHGIEKVSNVVHVLRTTRHNGFPVIDEPPVTECPVLFGLVLRAHLVTLLKKKAFLPTAVPTGIDAFNQFTAGDFAKRGLGNGDKIEDIDLTEEEMEMFVDLHPFTNASPYTVVETMSLAKALILFREVGLRHMLVIPKISSRLPVVGILTRHDFMPEHILGVHPSLLKSRWKKLRIRFPPWEK 765
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5ALW6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1241.1 bits (3210), Expect = 0.000e+0
Identity = 614/799 (76.85%), Postives = 685/799 (85.73%), Query Frame = 0
Match: A5ALW6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1241.1 bits (3210), Expect = 0.000e+0
Identity = 614/799 (76.85%), Postives = 685/799 (85.73%), Query Frame = 0
Query: 3 TADVNGNEDYVTQPLL---LHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVK---------------------------------IVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQ 765
+A N +E+ QPLL LHRS SN+TSQVAIVGSN+CPIESLDYEI EN+ FK+DWRSRGKVQ QY+F+KW+LC LIG IVS I FCNNLAVENLAG+KFV+TSNMML +++ AF VF +SNF LTLFA +ITAFIAP AAGSGIPEVKAYLNGVDAP IF+LKTLLVK IVGSI AVSSSL +GKAGPMVHTGAC+AA+ GQGGS+KY LTWRWLRYFKNDRDRRD VTCGSAAG+AA+FRAPVGGVLF+LEEMASWWRSAL+WR FFTTAVVAI+LRALID+CLSG+CGLFGTGGLIM+DVTS N TYH+ DVPPVL+LGVIGG+LGS YN++LEKVLR+Y+ I K YKI+LACSIS+ TSCLLFGLPWLASCQPCP DASE CPTIGRSGNYKKFQC PGHYNDLASL FNTNDDAIKNLFSKDTD+EFQ++SI++FF TCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLG+AS LGGSMRMTVSLCVIILELTNNLLLLPLIM+VLL+SKTVADAF+ N+YD+IMKLKGFPYLE HAEPYMRQLTV DVVTGPLQLF+ IEKV NIVHVL+TTGH+GFPVIDE SESPVLFGL+LRAHL+ LL+KKAFL T VR D AF+HFSA DF K+G D IE+I+LT EEMEM+IDLHP+ N+SPYTVVE+MSLAKALILFREVGLRHL+VIPKIS + PVVGILTRHDFMPEHILG+HP+L SRW+R+R +
Sbjct: 2 SAQPNADEESQAQPLLDPSLHRSLSNVTSQVAIVGSNVCPIESLDYEIYENDFFKQDWRSRGKVQIFQYIFVKWLLCFLIGLIVSLIGFCNNLAVENLAGVKFVITSNMMLVKRYGMAFLVFFSSNFVLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFTLKTLLVKGLNVRSYHFLAHHNFFDKMIVHFNMFGSLMKDRIVGSITAVSSSLLIGKAGPMVHTGACVAALLGQGGSRKYGLTWRWLRYFKNDRDRRDFVTCGSAAGIAASFRAPVGGVLFSLEEMASWWRSALLWRCFFTTAVVAIMLRALIDVCLSGKCGLFGTGGLIMFDVTSQNTTYHIKDVPPVLVLGVIGGLLGSFYNFLLEKVLRIYSYIYGKKPIYKIILACSISVFTSCLLFGLPWLASCQPCPIDASEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKDTDSEFQYSSILIFFATCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGAASLLGGSMRMTVSLCVIILELTNNLLLLPLIMVVLLVSKTVADAFNGNVYDIIMKLKGFPYLEAHAEPYMRQLTVEDVVTGPLQLFNVIEKVENIVHVLRTTGHHGFPVIDERSHSESPVLFGLVLRAHLIVLLRKKAFLTTAVRADSDAFRHFSAMDFTKRGSGNGDKIEDIELTEEEMEMFIDLHPFCNSSPYTVVETMSLAKALILFREVGLRHLLVIPKISNRSPVVGILTRHDFMPEHILGVHPLLVRSRWKRIRFQLPR 800
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QS06 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1240.71 bits (3209), Expect = 0.000e+0
Identity = 610/762 (80.05%), Postives = 680/762 (89.24%), Query Frame = 0
Match: A0A2R6QS06 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1240.71 bits (3209), Expect = 0.000e+0
Identity = 610/762 (80.05%), Postives = 680/762 (89.24%), Query Frame = 0
Query: 7 NGNEDYVTQPLLLHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQTDR 768
N +E+ +T PLLL RS SN TSQVAIVGSNLCPIESLDYEI EN+ FK+DWR+R K Q QY+FMKW LC L+G +VS + F NNLAVEN+AG+KFVVTSNMMLA K+ AF VF A+NFGLTLFA LITA+I+PEAAGSGIPEVKAYLNGVDAP IFSL+TL+VKIVGSI+AVSSSLH+GKAGPMVHTGAC+AA+ GQGGSKKY+LTWRWL+YFKNDRDRRDLVTCGSAAGMAAAFR+PVGGVLFALEEMASWWR AL+WR+FFTTAVVAIVLRA ID C +G+CGLFGTGGLIM+DVTSAN++YHL DVPPV LLG+IGGILGSLYN+IL+KV+R+Y +INEKG AYKILLACSISI TS LLFGLPWLASCQ CPADASE CPTIGRSGNYKKFQC PGHYNDLASL FNTNDDAIKNLFSK+TD+EF +SI++FF+TCFFLSIFSYGIVAP GLFVPVI+TGASYGR VGML+GS SNLNHGLFAVLGSAS LGGSMRMTVSLCV+ILE TNNLLLLPLIM+VLL+SKTV D F+ NIYDLIMKLKG PYLE HAEPYMRQLTV DVVTGPLQLFHGIEKV N+VHVL+TT HNGFPVIDE P +E PVLFGL+LRAHL+TLLKKKAFL T T I AF F+A DFAK+GL D IE+I LT EEMEM++DLHP+TNASPYTVVE+MSLAKALILFREVGLRH++VIPKIS + PVVGILTRHDFMPEHILG+HP L SRW++LRI F ++
Sbjct: 27 NADEESLTHPLLLLRSTSNTTSQVAIVGSNLCPIESLDYEIIENDFFKQDWRTRSKTQICQYLFMKWTLCFLVGIVVSLVGFTNNLAVENIAGIKFVVTSNMMLANKYLVAFVVFTAANFGLTLFASLITAYISPEAAGSGIPEVKAYLNGVDAPGIFSLRTLVVKIVGSISAVSSSLHIGKAGPMVHTGACVAALMGQGGSKKYRLTWRWLQYFKNDRDRRDLVTCGSAAGMAAAFRSPVGGVLFALEEMASWWRGALLWRAFFTTAVVAIVLRAFIDFCFTGKCGLFGTGGLIMFDVTSANISYHLEDVPPVFLLGIIGGILGSLYNFILDKVIRIYAIINEKGAAYKILLACSISIFTSGLLFGLPWLASCQACPADASEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKNTDSEFHWSSILIFFVTCFFLSIFSYGIVAPTGLFVPVILTGASYGRLVGMLIGSRSNLNHGLFAVLGSASLLGGSMRMTVSLCVVILEFTNNLLLLPLIMLVLLVSKTVGDVFNGNIYDLIMKLKGLPYLEAHAEPYMRQLTVSDVVTGPLQLFHGIEKVSNVVHVLRTTRHNGFPVIDEPPVTECPVLFGLVLRAHLITLLKKKAFLPTAEPTVIDAFNQFTAGDFAKRGLGNGDKIEDIDLTEEEMEMFVDLHPFTNASPYTVVETMSLAKALILFREVGLRHMLVIPKISSRLPVVGILTRHDFMPEHILGVHPSLLKSRWKKLRIRFPPWEK 788
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AY12 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1233.78 bits (3191), Expect = 0.000e+0
Identity = 622/768 (80.99%), Postives = 686/768 (89.32%), Query Frame = 0
Match: A0A5J5AY12 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1233.78 bits (3191), Expect = 0.000e+0
Identity = 622/768 (80.99%), Postives = 686/768 (89.32%), Query Frame = 0
Query: 1 MSTADVNGNEDYVTQPLLLH---RSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQ 765
MS + NG+E+ +T PLL H RSPSN TSQVAIVG+N+CPIESLDYEI EN+ FK+DWRS K+Q QY+FMKW LC LIG IV I F NNLAVEN+AG+KFV TSNMMLA K+ AF VF+ SNF LTLFA LITAFI+PEAAGSGIPEVKAYLNGVDAP IFSL+TL+VKI GSI+AVSSSL VGKAGP+VHTGAC+AAI GQGGSKKY+LTWRWL++FKNDRDRRDLVTCGSAAG+AAAFRAPVGGVLFALEEMASWWR AL+WR+FFT AVVA VLRALI++CLSG+CGLFGTGGLIM+DVTS NVTYHL DVP VLLLGVIGGILGS YN++LE+VLR+YNLI +KG AYKILLAC ISI TSCLLFGLPWLASCQ CP DASEPCPTIGRSGNYKKFQC PGHYNDLASL FNTNDDAIKNLFSK+TD+EFQ +S+++FF CFFLSI SYGIVAPAGLFVPVIVTGASYGRFVGML+GSHSNLNHGL+AVLGSAS LGGSMRMTVSLCVIILELTNNLLLLPLIM+VLL+SKTVADAF+ NIYDLIMKLKGFPYLE HAEPYMRQLTVGDVVTGPLQ+ HGI KV NIVHVL+TT HNGFPVIDE P SE+PVLFGLILRAHL+TLLKKKAFL+TPVR + AF FSA DFAKKGL DN+EEI+LT EEMEM+IDLHP+TN SPYTVVE+MSLAKAL LFR+VGLRHL+VI KIS + PVVGILTRHDFMPEH+LGLHP+L SSRW+RLR F +
Sbjct: 1 MSNSLSNGDEESLTHPLLNHFLRRSPSNTTSQVAIVGANVCPIESLDYEIIENDFFKQDWRSHSKIQICQYIFMKWTLCFLIGLIVGLIGFFNNLAVENIAGLKFVKTSNMMLANKYWVAFLVFSVSNFVLTLFASLITAFISPEAAGSGIPEVKAYLNGVDAPGIFSLRTLVVKIAGSISAVSSSLLVGKAGPLVHTGACVAAIMGQGGSKKYRLTWRWLKFFKNDRDRRDLVTCGSAAGIAAAFRAPVGGVLFALEEMASWWRGALLWRAFFTAAVVAFVLRALIEVCLSGKCGLFGTGGLIMFDVTSTNVTYHLGDVPSVLLLGVIGGILGSAYNFLLERVLRIYNLIYKKGTAYKILLACFISIFTSCLLFGLPWLASCQSCPTDASEPCPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSKNTDSEFQISSMLIFFFACFFLSILSYGIVAPAGLFVPVIVTGASYGRFVGMLIGSHSNLNHGLYAVLGSASLLGGSMRMTVSLCVIILELTNNLLLLPLIMLVLLVSKTVADAFNGNIYDLIMKLKGFPYLEAHAEPYMRQLTVGDVVTGPLQILHGIVKVSNIVHVLETTRHNGFPVIDEPPHSETPVLFGLILRAHLITLLKKKAFLVTPVRAGVDAFNQFSAEDFAKKGLGNGDNMEEIELTNEEMEMFIDLHPFTNTSPYTVVETMSLAKALTLFRDVGLRHLLVISKISNRSPVVGILTRHDFMPEHVLGLHPLLVSSRWKRLRFPFPR 768
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: U7E1A6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1233.39 bits (3190), Expect = 0.000e+0
Identity = 613/766 (80.03%), Postives = 690/766 (90.08%), Query Frame = 0
Match: U7E1A6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1233.39 bits (3190), Expect = 0.000e+0
Identity = 613/766 (80.03%), Postives = 690/766 (90.08%), Query Frame = 0
Query: 1 MSTADVNG--NEDY--VTQPLLL-HRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRI 761
M+T +NG N+D+ VT PLL RS N TSQVAIVG+N+CPIESLDYEI EN+LFK+DWRS GK+Q QYVFMKW+LC LIG IVS I F NNLAVEN+AG+KFVVTSNMMLA++F AF VF+ SN LTLFA +ITAFIAP AAGSGIPEVKAYLNGVDAP IFSL+TL+VKI+GSI+AVSSSL VGKAGPMVHTGAC+AA+ GQGGSK+++LTWRWL +F+NDRDRRDLVTCGSAAG+AA FRAPVGGVLFALEEMASWWRS L+WRSFFTTAVVAIVLRALID CLSG+CGLFG GGLIM+DV SA+VTYHL DVPP L LGVIGGILGSLYN++L+KVLR+YNLINEKGIAYKI LAC+IS+ TSCLLFGLPWLASCQPCP+DASE CPTIGRSGN+KKFQC PGHYNDLASL FNTNDDA++NLFSK+T++EFQ++SI++FF+TCFFLSIFS GIVAPAGLFVPVIVTGASYGRFVGMLVGSHS+LNHGL+AVLG+ASFLGGSMRMTVSLCVIILELTNNLLLLPLIM+VLLISKTVADAF+ NI+DLIMK KGFPYLE+HAEPYMRQLTVGDVVTGPLQ+F GIEKVGNIVHVL+TT HNGFPV+DE P SE PVL+GLILRAHL+ LLKKKAF+ PV T I A K FSA D A++G D IEE++ T EEMEM++DLHP+TNASPYTVVE+MSLAKALILFREVGLRHL+V+ +ISG+ PVVGILTRHDFMPEHILGLHP+L SRW+RLRI
Sbjct: 1 MATNSINGEANDDHESVTIPLLTSERSNVNSTSQVAIVGANVCPIESLDYEIAENDLFKQDWRSGGKIQIFQYVFMKWLLCFLIGLIVSLIGFFNNLAVENIAGLKFVVTSNMMLAKRFGMAFLVFSVSNLTLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFSLRTLIVKIIGSISAVSSSLFVGKAGPMVHTGACVAALLGQGGSKRFRLTWRWLHFFRNDRDRRDLVTCGSAAGIAAGFRAPVGGVLFALEEMASWWRSVLLWRSFFTTAVVAIVLRALIDFCLSGKCGLFGKGGLIMFDVYSASVTYHLIDVPPALALGVIGGILGSLYNFLLDKVLRIYNLINEKGIAYKIFLACAISVSTSCLLFGLPWLASCQPCPSDASESCPTIGRSGNFKKFQCPPGHYNDLASLIFNTNDDAVRNLFSKNTNSEFQYSSILIFFVTCFFLSIFSCGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSSLNHGLYAVLGAASFLGGSMRMTVSLCVIILELTNNLLLLPLIMLVLLISKTVADAFNGNIFDLIMKAKGFPYLESHAEPYMRQLTVGDVVTGPLQVFQGIEKVGNIVHVLRTTRHNGFPVVDEPPLSEPPVLYGLILRAHLIELLKKKAFMSAPVPTSIDALKLFSAGDSAERGSGNGDKIEELRFTEEEMEMFLDLHPFTNASPYTVVETMSLAKALILFREVGLRHLLVMSRISGRSPVVGILTRHDFMPEHILGLHPLLIRSRWKRLRI 766
BLAST of XM_017393210.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5QIB3 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1233.01 bits (3189), Expect = 0.000e+0
Identity = 610/764 (79.84%), Postives = 686/764 (89.79%), Query Frame = 0
Match: A0A4U5QIB3 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})
HSP 1 Score: 1233.01 bits (3189), Expect = 0.000e+0
Identity = 610/764 (79.84%), Postives = 686/764 (89.79%), Query Frame = 0
Query: 3 TADVNGNEDYVTQPLLL-HRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSRGKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAVFAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAVSSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMAAAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGLIMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLACSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNTNDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKTVADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLKTTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFAKKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMVIPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQ 765
+ N +++ VT PLL RS N TSQVAIVG+N+CPIESLDYEI EN+LFK+DWRS GK+ QYVFMKW+LC LIG IVS I F NNLAVEN+AG+KFVVTSNMMLA++F AF VF+ SN LTLFA +ITAFIAP AAGSGIPEVKAYLNGVDAP IFSL+TL+VKI+GSI+AVSSSL VGKAGPMVHTGAC+AA+ GQGGSK+++LTWRWL +F+NDRDRRDLVTCGSAAG+AA FRAPVGGVLFALEEMASWWRS L+WRSFFTTAVVAIVLRALID CLSG+CGLFG GGLIM+DV SA+VTYHL DVPP L LGVIGGILGSLYN++L+KVLR+YNLINEKGIAYKI LAC+IS+ TSCLLFGLPWLASCQPCP+DASE CPTIGRSGN+KKFQC PGHYNDLASL FNTNDDA++NLFSK+T++EFQ++SI++FF+TCFFLSIFS GIVAPAGLFVPVIVTGASYGRFVGMLVGSHS+LNHGL+AVLG+ASFLGGSMRMTVSLCVIILELTNNLLLLPLIM+VLLISKTVADAF+ NI+DLIMK KGFPYLE+HAEPYMRQLTVGDVVTGPLQ+F GIEKVGNI+HVL+TT HNGFPVIDE P SESPVL+GLILRAHL+ LLKKKAF+ PV T I A K FSA DFA+ D IEE++ T EEMEM++DLHP+TNASPYTVVE+MSLAKALILFREVGLRHL+V+PKISG+ PVVGILTRHDFM EHILGLHP+L SRW+RLRI S+
Sbjct: 7 NGEANDDQESVTIPLLTSERSNVNSTSQVAIVGANVCPIESLDYEIAENDLFKQDWRSGGKIHIFQYVFMKWLLCFLIGLIVSLIGFFNNLAVENIAGLKFVVTSNMMLAKRFGMAFLVFSVSNLTLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFSLRTLIVKIIGSISAVSSSLFVGKAGPMVHTGACVAALLGQGGSKRFRLTWRWLHFFRNDRDRRDLVTCGSAAGIAAGFRAPVGGVLFALEEMASWWRSVLLWRSFFTTAVVAIVLRALIDFCLSGKCGLFGKGGLIMFDVYSASVTYHLIDVPPALALGVIGGILGSLYNFLLDKVLRIYNLINEKGIAYKIFLACAISVSTSCLLFGLPWLASCQPCPSDASESCPTIGRSGNFKKFQCPPGHYNDLASLIFNTNDDAVRNLFSKNTNSEFQYSSILIFFVTCFFLSIFSCGIVAPAGLFVPVIVTGASYGRFVGMLVGSHSSLNHGLYAVLGAASFLGGSMRMTVSLCVIILELTNNLLLLPLIMLVLLISKTVADAFNGNIFDLIMKAKGFPYLESHAEPYMRQLTVGDVVTGPLQVFQGIEKVGNILHVLRTTRHNGFPVIDEPPLSESPVLYGLILRAHLIELLKKKAFMSAPVPTSIDALKLFSAGDFAETRSGNGDKIEELRFTEEEMEMFLDLHPFTNASPYTVVETMSLAKALILFREVGLRHLLVMPKISGRSPVVGILTRHDFMAEHILGLHPLLIRSRWKRLRIRVSR 770
| Match Name | Stats | Description |
|---|---|---|
| D7T4W0 | E-Value: 0.000e+0, PID: 80.29 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A0A2K1ZXS8 | E-Value: 0.000e+0, PID: 80.11 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| E2GMA5 | E-Value: 0.000e+0, PID: 79.90 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A0A5B6ZLG9 | E-Value: 0.000e+0, PID: 82.44 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A0A7J0FLU6 | E-Value: 0.000e+0, PID: 80.31 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A5ALW6 | E-Value: 0.000e+0, PID: 76.85 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A0A2R6QS06 | E-Value: 0.000e+0, PID: 80.05 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A0A5J5AY12 | E-Value: 0.000e+0, PID: 80.99 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| U7E1A6 | E-Value: 0.000e+0, PID: 80.03 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
| A0A4U5QIB3 | E-Value: 0.000e+0, PID: 79.84 | Chloride channel protein {ECO:0000256|RuleBase:RU3... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |