XM_017397025.1

Resource Type: 
Polypeptide
Name: 
XM_017397025.1
Identifier: 
XM_017397025.1-protein
Sequence: 
MMMYPSAASSSSANSASVRVEKATSEFLNGPDWTLNIDICDAINLNHWLA
KDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDM
IKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVE
FPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLS
LSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQ
MLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTE
VPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAEEEEEEDEFAQLARRH
SKTQSATSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLA
LSTTDTPPPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSY
VAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFS
SGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQ
QAQYQTHSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQT
QGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQVNTTAYRPMQGAGS
LQHVNSANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNG
DGRSKTNNTSPSLSGTTQSMGGGWK
Sequence Length: 
725
Sequence Checksum: 
7d18750060029abcdc61393b4cc8a317
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017397025.1, derives from mRNA, XM_017397025.1.
Loading content
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1AXI6 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_021291594.1, ECO:0000313|RefSeq:XP_021291596.1}))

HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 407/753 (54.05%), Postives = 495/753 (65.74%), Query Frame = 0
 
Query:   17 SVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAP-STVVINAAAEEEEEEDEFAQLARRHSK--------------------TQSATSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTP----PPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPR-QAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQ-----------QVNTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 725
            +V V+KATS+ L GPDWT+NIDICD++N NHW AKD+VKA+KKRLQHK+S V LLALTLLETMVKNCGD VH QI ERNIL +M+KIVKKK +M VR+KILVLLDSWQ+AFGG GG++PQYYWAY+ELRR GVEFP+R+ D++ IFTPP TH T+ H H GYGMPSNSS RLDE MA+EIE+LSLSS++SM++V++LLS MLQAV+P+DR+A+KDEVIVDLV RCRSN KKLMQMLTTT DEELL +GLELND +Q+ LAKHDAIA+G PLP QV +   +  E  S+S K ++ K  S +P  +PSAP +TV  N   EEEEEED+FAQLARRHS+                      +A + S    AS + P   NAL + DPP PV+TTKEQD+ID LS+ LSTT       PP P S++ QNM Q PV P+ QG PYA QTY G+Q ++ + SYV PWAQPQP  Q+ +Q      PQ QPP  +Q + R Q+Q+Q   QS   +  +   QT   Q QS+  S      QPQ+Q Q+QS       P  Q QP Q Q  +         Q   Q Q    +   Q  QP  Q Q Q Q   F       Q Q Q  QYSS YPPPPWAATPGY+ +P             Q+N     P+ G   LQHVNS     +NG+ +  D  +S G        GQK F+P+YRLFEDLNVLGN DGR K T++TSPSLSGT +QSM GG K
Sbjct:   13 TVAVDKATSDLLIGPDWTMNIDICDSVNSNHWQAKDVVKAVKKRLQHKSSKVQLLALTLLETMVKNCGDYVHFQIAERNILGEMVKIVKKKADMVVRDKILVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGVEFPKRSLDASPIFTPPATHPTMRHNHPGYGMPSNSSRRLDETMATEIESLSLSSLDSMRDVMELLSDMLQAVNPDDRVAVKDEVIVDLVNRCRSNQKKLMQMLTTTGDEELLVRGLELNDSLQSLLAKHDAIASGSPLPIQVTNASSKPAEA-STSNKSNEVKNSSLTPNISPSAPIATVTRNQIDEEEEEEDDFAQLARRHSRAQSTSSQSTSAGTSEGIVPINNTAPTTSYVPAASTSTP--CNALALPDPPAPVRTTKEQDLIDLLSITLSTTSASSPHTPPTP-SASYQNMHQVPVPPSTQGYPYASQTYPGSQRQLPYDSYVVPWAQPQPHPQKPSQ------PQIQPPYHSQQEVRPQSQHQIDQQSQSQTQFHTDSQT---QIQSNSLS----QAQPQFQTQSQS------LPRPQSQPLQLQASSQI-------QLQPQLQSQPQRQAQQQNQPHLQAQSQTQTQSFLQPQHQPQFQPQYPQYSSGYPPPPWAATPGYFNSPNHLSSANNMFSTPQMNVATSNPIIGNRPLQHVNSFPARGSNGAPMNGDSWASTGHRNPTPVAGQKPFIPSYRLFEDLNVLGNADGRLKMTSSTSPSLSGTSSQSMVGGRK 735    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EHP0 ((ENTH/VHS/GAT family protein {ECO:0000313|EMBL:EOY04530.1}))

HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0
Identity = 397/761 (52.17%), Postives = 477/761 (62.68%), Query Frame = 0
 
Query:   17 SVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAP-STVVINAAAEEEEEEDEFAQLARRHSK--------------------TQSATSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTP----PPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQPQ--------------------QPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQVNTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 725
            +V V+KATS+ L GPDWT+NIDICD++N NHW AKD+VKA+KKRLQHK+S V LLALTLLETMVKNCGD VH QI ERNIL +M+KIVKKK +M VR+KILVLLDSWQ+AFGG GG++P YYWAY+ELRR GVEFP+R+ D+A IFTPP TH TV H H GYGMPSNSS RLDE MA+EIE+LSLSS++SM++V++LLS MLQAV+P+DR A+KDEVIVDLV RCRSN KKLMQMLTTT DEELLA+GLELND +Q+ LAKHDAIA+G PLP QV +   +  E  S+S K ++ K  S +P  +PSAP +TV  +   EEEEEED+FAQLARRHS+                      +A + S    AS + P   NAL + DPP PV+TTKEQD+ID LS+ LSTT       PP P S++ QNM QAPV P+ QG PYA QTY G+Q ++ ++SYV PWAQPQP  Q+ +Q      PQ QP   +Q Q          Q  Q  S + T    Q Q QS+  S      QP +Q Q+QS       P  Q  P Q Q  +  Q Q        +                      QPQ+Q H QPQ PQ                           YSS YPPPPWAATPG              RP      LQHVNS     +NG+ +  D  +S G        GQK F+P+YRLFEDLNVLGN DGR K T++TSPSLSGT +QSM GG K
Sbjct:   13 TVAVDKATSDLLIGPDWTMNIDICDSVNSNHWQAKDVVKAVKKRLQHKSSKVQLLALTLLETMVKNCGDYVHFQIAERNILGEMVKIVKKKADMVVRDKILVLLDSWQEAFGGPGGKHPHYYWAYDELRRSGVEFPKRSLDAAPIFTPPATHPTVRHNHPGYGMPSNSSRRLDETMATEIESLSLSSLDSMRDVMELLSDMLQAVNPDDRAAVKDEVIVDLVNRCRSNQKKLMQMLTTTGDEELLARGLELNDSLQSLLAKHDAIASGSPLPIQVTNVSSKPAEA-STSNKSNEVKDSSLTPNISPSAPIATVTRSQIDEEEEEEDDFAQLARRHSRAQSTSSQSTSAGTSEGIVPINNTAPTTSYVPAASTSSPC--NALALPDPPAPVRTTKEQDLIDLLSITLSTTSASSPHTPPTP-SASYQNMHQAPVPPSTQGYPYASQTYPGSQRQLPYNSYVVPWAQPQPHPQKPSQ------PQVQPQYLSQQQVHPQSQHQIDQQSQSQSQFHTDS--QTQIQSNSLS----QAQPHFQTQSQS------LPRPQSHPLQLQAASQIQLQPQSQSQPQRQAQQQTQPRLQAQSQTQTQSFLQPQHQPHFQPQYPQ---------------------------YSSGYPPPPWAATPG-------------NRP------LQHVNSFPARGSNGAPMNGDSWASTGYKNPTPVAGQKPFIPSYRLFEDLNVLGNTDGRLKMTSSTSPSLSGTSSQSMVGGRK 705    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8E3W5 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_016541942.1}))

HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 390/740 (52.70%), Postives = 452/740 (61.08%), Query Frame = 0
 
Query:   18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAEE----EEEEDEFAQLARRHSKTQSA---------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTP-PPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQ-PQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPR-----------QQVNTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGTTQ-SMGGGWK 725
            VRVEKATSEFL GPDWT+NIDICD IN N WLAKD VKA+KKRLQHKN  V LL+LTLLETMVKNCGD  H QI ER+ILQDM+KIVKKKT+M VR K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+ + D+A IFTPPVTH        GYGMP NSSTRLDEAMA+E+  LSLSSINSM+++ DLL+ MLQAV P DR+A+KDEVIVDLV+RCRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP Q  +      E+   SLK  + K  S +  A PSAP   V+ A A +    E+EED+FAQLARRHSKT  A          + S F  A   +P  +NAL++ D P     TKE D+ID LSL LS +  P  P   +S TQN  Q P++   QG+PYA QTY G Q + +F+SYVAPWA PQPQ     Q H Q                Q Q QPQ+Q P            Q QFQ           QPQ Q   QS       P  Q   +      H+  Q PQ    S+  +QP+ Q    PQ  Q                 P   Q Q  QY SAYPPPPWAATPGY +NP             Q  T A  P+QG  S+Q+ NS     +NG  I  D +  L P     A GQKTF+P+YRLFEDLNV GNGD R   +N+S  LSGT   SM GG K
Sbjct:   21 VRVEKATSEFLIGPDWTMNIDICDTINSNQWLAKDTVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNAHFQIAERSILQDMVKIVKKKTDMHVRHKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKPSFDTAPIFTPPVTHPAPRQPQPGYGMPINSSTRLDEAMAAEVGNLSLSSINSMRDIADLLADMLQAVTPGDRLAVKDEVIVDLVDRCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQTVLAKHDAIASGSPLPTQFPNDNISAREMNDPSLKPAEVKSPSPTADAKPSAP---VLPATAGQIDEEEDEEDDFAQLARRHSKTSPAALTHEGMVPANTSNFT-AEPMDPVTNNALILHDSPATSTPTKELDIIDLLSLTLSPSVYPETPQNSASATQNTHQEPLASTTQGNPYASQTYLGYQDQ-SFNSYVAPWAHPQPQ-----QFHPQ---------------YQHQGQPQLQHP-----------TQVQFQP----------QPQSQIHHQSRPQPSNQPQPQQPQESPLQSQHTSQQLPQSPLQSELNEQPRTQLELHPQSQQL----------------PPHAQTQFLQY-SAYPPPPWAATPGYLSNPSPSARPTFMYSTPQATTNASVPLQGPRSIQNFNSFPTMGSNGVAINGDTRVPLHPKTTTPASGQKTFIPSYRLFEDLNVFGNGDQR---HNSSSGLSGTNSPSMVGGRK 694    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IRI4 ((Uncharacterized protein {ECO:0000313|EMBL:OIS97760.1}))

HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 396/736 (53.80%), Postives = 478/736 (64.95%), Query Frame = 0
 
Query:   18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQV----------NTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
            VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+VKA+KKRLQHKN  V LL+LTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ DSA IFTPPVTH        GYGMPSNSSTRLDEAMA+E+E LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV++CRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP +V +      E+   SLK  + K  + +  A PSAP  V+   A +   EE+EED+FAQLARRHSKT  A        ++ ++ +     +P  SNAL++ DPP     TKEQD+ID LSL LS++  P  P   +S   +  Q PV+   QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q   Q  PQ Q  +Q Q QP   QY  Q Q+P  +      Q Q       Q  P +P  QPQY                   PQ++  Q+       Q+ +   PQ P  QT    QQP+ Q +  PQ  Q      P + Q Q  QY SAYPPPPWA+TPGY++NP              NT+   P+QG   +Q+VNS     +NG  I  D Q    P   +S  GQK F+P+YRLFEDL+V GNGD R   +N+S  +SGT +QSM GG K
Sbjct:   30 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDSAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAAEMENLSLSSINSMKEVADLLADMLQAVTPGDRLAVQDEVIVDLVDQCRSNQKKLMQMLTTTRDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNILAREMHDPSLKPAEVKPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSANNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQAQPQPQPQSQSQPQFRPQFQSAAQPQSQP---QYHHQFQTPTQAQFQAQPQPQAQPLHQPQSQP-HPRPQPQY-------------------PQESSLQS-------QHTSQQLPQSP-LQTELN-QQPRTQLELHPQPQQL-----PPRAQTQFPQY-SAYPPPPWASTPGYFSNPNHSTRPSYMYSTPQNTSM--PLQGPRPVQNVNSIPTMGSNGVAINGDAQIRPSPKTTSSTAGQKPFIPSYRLFEDLSVFGNGDQR---HNSSSGVSGTNSQSMVGGRK 719    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2B547 ((Uncharacterized protein {ECO:0000313|EMBL:TMW89004.1}))

HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 406/740 (54.86%), Postives = 482/740 (65.14%), Query Frame = 0
 
Query:   16 ASVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--TSQSTF-AGASET-----EPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPPPAPDS-STTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSP-QFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQT-HSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSS--QYSSAYPPPPWAATPGYYTNPRQ---------QVNTTAYRPMQGAGSLQHVNS--ANGSN-IARDGQSSLGPTGNAS-AGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
            A+VRVEKATSEFL GPDWT+NIDICD IN N WLAKD+VKA+KKRLQHKN  V LLALTL+ETMVKNCGD VH QI ER ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH     A  GYGMP+NSSTRLDEAMA+++  LSLSSINSM++V DLL+ MLQAV P DR+A+KDEVIVDLV+RCRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP QV +      E+   SLK  + K  S      PSAP  V++  A +   EE+EED+FAQLARRHSKT  A  TS+ T  A AS +     +P  SNAL++ DP  P  +TKEQD+ID LSL LS++  P  + +S S TQN  Q P++    G+PYA Q Y G Q + +F+SYVAPWAQPQPQ Q   Q H        P  Q QGQP   Q+ PQ Q P Q           Q Q QS       P  QP  Q Q Q             QPQ++  Q+ H+  Q PQ      P QP+       QQP+ Q +  P       Q +P  P+ Q+   QY SAYPPPPWAATPGY +NP           Q  T     +Q    +Q+VNS    GSN IA +G + + P    + A GQKTF+P+YRLFEDLNV GN D R   +N+S  LSGT +QSM GG K
Sbjct:   19 AAVRVEKATSEFLIGPDWTMNIDICDTINSNQWLAKDVVKAVKKRLQHKNPKVQLLALTLMETMVKNCGDNVHFQITERTILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQAQPGYGMPNNSSTRLDEAMAADVGNLSLSSINSMRDVADLLADMLQAVTPGDRLAVKDEVIVDLVDRCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQTVLAKHDAIASGSPLPTQVPNDNFSAREMHDPSLKPVEVKPPSPIADVKPSAP--VLVATAGQIDEEEDEEDDFAQLARRHSKTCPAAQTSEGTVSANASNSMGEPLDPVASNALILRDP--PATSTKEQDIIDLLSLTLSSSVYPETSQNSASATQNTHQEPLASTTHGNPYASQAYIGYQDQ-SFNSYVAPWAQPQPQHQSPPQFH--------PQYQHQGQP---QFHPQFQHPTQAQVQSQPQPHPQQQPQSQLHHQSRP--QPSTQPQRQ-------------QPQESSLQSQHTSQQLPQ-----SPVQPELN-----QQPRTQQELHP-------QSQPLSPRTQTQFLQY-SAYPPPPWAATPGYLSNPTSRPAYMYSTPQAATNTPMSLQATRPIQNVNSFPNMGSNGIAINGDTQVHPHPKTTPASGQKTFIPSYRLFEDLNVFGNSDQR---HNSSSGLSGTNSQSMVGGRK 706    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4ADR9 ((target of Myb protein 1-like isoform X1 {ECO:0000313|RefSeq:XP_016474832.1}))

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 395/738 (53.52%), Postives = 475/738 (64.36%), Query Frame = 0
 
Query:   18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQT-HSQPQQPQYQTHSQPQQPQYQTHGQPQQP--QFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQV----------NTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGTTQSMGGGWK 725
            VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+ KA+KKRLQHKN  V LLALTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH        GYGMPSNSSTRLDEAMA+E+  LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV++CRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP +V +      E+   SLK  + K  + +  A PSAP  V+   A +   EE+EED+FAQLARRHSKT  A        ++ ++ +     +P  SNAL++ DPP     TKEQD+ID LSL LS++  P  P   +S   +  Q PV+   QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q   Q  PQ Q  +Q Q QP   QY  Q Q+P  +      Q Q       Q  P +P  QPQY                   PQ++  Q+ H+  Q PQ      P QP+       QQP  Q +   QPQQ        P + Q Q  QY SAYPPPPWA+TPGY++NP              NT+   P+QG   +Q+VNS     +NG  I  D Q    P   +SA GQK F+P+YRLFEDLNV GNGD R   N++S     ++QSM GG K
Sbjct:   22 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVAKAVKKRLQHKNPKVQLLALTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAAEMANLSLSSINSMKEVADLLADMLQAVIPGDRLAVQDEVIVDLVDQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVKPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSANNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQAQPQPQPQSQSQPQFRPQFQSAAQPQSQP---QYHHQFQTPTQAQFQAQAQPQAQSLHQPQSQP-HPRPQPQY-------------------PQESSLQSQHTSQQLPQ-----SPLQPELN-----QQPRTQLELHSQPQQL-------PPRAQTQFPQY-SAYPPPPWASTPGYFSNPNHSTRPSYMYSTPQNTSM--PLQGPRPVQNVNSIPTMGSNGVAINGDAQIRSSPKTTSSAAGQKPFIPSYRLFEDLNVFGNGDQRH--NSSSGVSGTSSQSMVGGRK 711    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4AEE4 ((target of Myb protein 1-like isoform X2 {ECO:0000313|RefSeq:XP_016474833.1}))

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 395/738 (53.52%), Postives = 475/738 (64.36%), Query Frame = 0
 
Query:   18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQT-HSQPQQPQYQTHSQPQQPQYQTHGQPQQP--QFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQV----------NTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGTTQSMGGGWK 725
            VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+ KA+KKRLQHKN  V LLALTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH        GYGMPSNSSTRLDEAMA+E+  LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV++CRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP +V +      E+   SLK  + K  + +  A PSAP  V+   A +   EE+EED+FAQLARRHSKT  A        ++ ++ +     +P  SNAL++ DPP     TKEQD+ID LSL LS++  P  P   +S   +  Q PV+   QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q   Q  PQ Q  +Q Q QP   QY  Q Q+P  +      Q Q       Q  P +P  QPQY                   PQ++  Q+ H+  Q PQ      P QP+       QQP  Q +   QPQQ        P + Q Q  QY SAYPPPPWA+TPGY++NP              NT+   P+QG   +Q+VNS     +NG  I  D Q    P   +SA GQK F+P+YRLFEDLNV GNGD R   N++S     ++QSM GG K
Sbjct:   16 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVAKAVKKRLQHKNPKVQLLALTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAAEMANLSLSSINSMKEVADLLADMLQAVIPGDRLAVQDEVIVDLVDQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVKPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSANNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQAQPQPQPQSQSQPQFRPQFQSAAQPQSQP---QYHHQFQTPTQAQFQAQAQPQAQSLHQPQSQP-HPRPQPQY-------------------PQESSLQSQHTSQQLPQ-----SPLQPELN-----QQPRTQLELHSQPQQL-------PPRAQTQFPQY-SAYPPPPWASTPGYFSNPNHSTRPSYMYSTPQNTSM--PLQGPRPVQNVNSIPTMGSNGVAINGDAQIRSSPKTTSSAAGQKPFIPSYRLFEDLNVFGNGDQRH--NSSSGVSGTSSQSMVGGRK 705    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HJJ3 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5952401.1}))

HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 309/449 (68.82%), Postives = 355/449 (79.06%), Query Frame = 0
 
Query:   16 ASVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAEEEEEEDEFAQLARRHSKTQSATSQSTFAGASETEPSL-------SNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPPPAPDS--STTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWA 455
            A+VRVEKATS+ L GPDWT+N+DICD+IN NHW AKD+VKALKKRLQHKN  VHLLALTLLETMVKNCGD VHSQIVERNILQ+MIKIVKKKT+M VR+KILVLLDSWQ+AFGG GG+ PQYYWAY+ELRR GV FPQR+ D+A IFTPPV HST+ HA AGYGMPSNSSTRLDEAMA+E+E LSLSSINSM+ VLDLL+ MLQAV+PNDR ++KDEVIVDLV RCRSN KKLMQMLTTT DEELL +GLELND +Q ELAKHDAIA+G PLP QV +  PQ      SSLK  + K+ S +P    S P      A  EEE+EED+FAQLARRHS+T+S TSQ T  G +E+  S+       SNAL + DPP PV+TTKEQDMID LS+ LSTT   P  P +  S++QN+Q  PVSP  QG PYA Q Y GN G+V ++SYV PWA
Sbjct:   13 ATVRVEKATSDLLIGPDWTMNMDICDSINSNHWEAKDVVKALKKRLQHKNPKVHLLALTLLETMVKNCGDYVHSQIVERNILQEMIKIVKKKTDMHVRDKILVLLDSWQEAFGGPGGKCPQYYWAYDELRRSGVVFPQRSFDTAPIFTPPVAHSTLRHAQAGYGMPSNSSTRLDEAMAAEMENLSLSSINSMRNVLDLLADMLQAVNPNDRASVKDEVIVDLVTRCRSNQKKLMQMLTTTGDEELLGQGLELNDSLQTELAKHDAIASGSPLPTQVTNLSPQSVPAHDSSLKPTEHKQPSQTPNVNRSPP------AVEEEEDEEDDFAQLARRHSRTRSTTSQDT-TGTNESVTSVNATNNIPSNALALPDPPAPVRTTKEQDMIDLLSITLSTTTPSPQTPHTPASSSQNIQHTPVSPTTQGYPYASQAYLGNVGQVPYNSYVVPWA 454    

HSP 2 Score: 80.4925 bits (197), Expect = 4.744e-13
Identity = 68/131 (51.91%), Postives = 83/131 (63.36%), Query Frame = 0
 
Query:  615 SSAYPPPPWAATPGYYTN-----------PRQQVNT-TAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNA-SAGGQKTFVPTYRLFEDLNVLGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 725
            SSAYPPPPWA TPGY++N             Q+ N  ++Y  MQG   L+  NS     +NG+ +  + + S  PT  A +A  QK FVP+YRLFEDLNVLGN DGR K T+NTSPSLSGT +QSM GG K
Sbjct:  520 SSAYPPPPWAPTPGYFSNQNQFSTRPYALATQRANAPSSYTSMQGGRPLEQFNSFNARGSNGTPMNGELRVSPSPTITAPAAAVQKPFVPSYRLFEDLNVLGNADGRFKMTSNTSPSLSGTSSQSMVGGRK 650    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VVC5 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_009766354.1}))

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 388/735 (52.79%), Postives = 467/735 (63.54%), Query Frame = 0
 
Query:   18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--TSQSTFAG------ASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQP-QYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTN------PRQQVNT--TAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
            VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+VKA+KKRLQHKN  V LL+LTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH        GYGMPSNSSTRLDEAMA+++E LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV +CRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP +V +      E+   SLK  + +  + +  A PSAP  V+   A +   EE+EED+FAQLARRHSKT  A  TS+   +           +P  SNAL++ DPP     TKEQD+ID LSL LS++  P  P   +S   +  Q PV+   QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q   Q                Q QY  Q Q+P  +      Q Q              L QP  + Q Q PQ S           Q+Q+ +   PQ P Q + + QP+  Q + H QPQQ                   P + Q Q  QY SAYPPPPWA+TPGY++N      P    +T      P+QG   +Q+VNS     +NG  I  D Q    P   +S  GQK F+P+YRLFEDLNV GNGD R   +N+S  +SGT +QSM GG K
Sbjct:   32 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAADMENLSLSSINSMKEVADLLADMLQAVTPGDRLAVQDEVIVDLVYQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVEPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSAYNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQTQPQPQPQSQSQPQ---FPPQFQPQSQPQSQPQYHHQFQTPTQAQFQTQAQAQPQAQP---------LHQPHPRPQPQYPQES---------SLQSQHTSQQLPQCPLQTELNQQPRT-QLELHPQPQQ------------------LPPRAQTQFPQY-SAYPPPPWASTPGYFSNLNHSTRPSYMYSTPQNTSMPLQGPRPVQNVNSIPTMGSNGVAINGDAQIRPSPKTTSSTAGQKPFIPSYRLFEDLNVFGNGDQR---HNSSSGVSGTNSQSMVGGRK 719    
BLAST of XM_017397025.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3ZYU9 ((target of Myb protein 1-like isoform X1 {ECO:0000313|RefSeq:XP_016469481.1}))

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 388/735 (52.79%), Postives = 467/735 (63.54%), Query Frame = 0
 
Query:   18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--TSQSTFAG------ASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQP-QYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTN------PRQQVNT--TAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
            VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+VKA+KKRLQHKN  V LL+LTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH        GYGMPSNSSTRLDEAMA+++E LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV +CRSN KKLMQMLTTT DEELLA+GLELND +Q  LAKHDAIA+G PLP +V +      E+   SLK  + +  + +  A PSAP  V+   A +   EE+EED+FAQLARRHSKT  A  TS+   +           +P  SNAL++ DPP     TKEQD+ID LSL LS++  P  P   +S   +  Q PV+   QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q   Q                Q QY  Q Q+P  +      Q Q              L QP  + Q Q PQ S           Q+Q+ +   PQ P Q + + QP+  Q + H QPQQ                   P + Q Q  QY SAYPPPPWA+TPGY++N      P    +T      P+QG   +Q+VNS     +NG  I  D Q    P   +S  GQK F+P+YRLFEDLNV GNGD R   +N+S  +SGT +QSM GG K
Sbjct:   32 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAADMENLSLSSINSMKEVADLLADMLQAVTPGDRLAVQDEVIVDLVYQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVEPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSAYNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQTQPQPQPQSQSQPQ---FPPQFQPQSQPQSQPQYHHQFQTPTQAQFQTQAQAQPQAQP---------LHQPHPRPQPQYPQES---------SLQSQHTSQQLPQCPLQTELNQQPRT-QLELHPQPQQ------------------LPPRAQTQFPQY-SAYPPPPWASTPGYFSNLNHSTRPSYMYSTPQNTSMPLQGPRPVQNVNSIPTMGSNGVAINGDAQIRPSPKTTSSTAGQKPFIPSYRLFEDLNVFGNGDQR---HNSSSGVSGTNSQSMVGGRK 719    
Match NameStatsDescription
A0A6J1AXI6E-Value: 0.000e+0, PID: 54.05(target of Myb protein 1-like {ECO:0000313|RefSeq:... [more]
A0A061EHP0E-Value: 0.000e+0, PID: 52.17(ENTH/VHS/GAT family protein {ECO:0000313|EMBL:EOY... [more]
A0A1U8E3W5E-Value: 0.000e+0, PID: 52.70(target of Myb protein 1-like {ECO:0000313|RefSeq:... [more]
A0A1J6IRI4E-Value: 0.000e+0, PID: 53.80(Uncharacterized protein {ECO:0000313|EMBL:OIS9776... [more]
A0A6N2B547E-Value: 0.000e+0, PID: 54.86(Uncharacterized protein {ECO:0000313|EMBL:TMW8900... [more]
A0A1S4ADR9E-Value: 0.000e+0, PID: 53.52(target of Myb protein 1-like isoform X1 {ECO:0000... [more]
A0A1S4AEE4E-Value: 0.000e+0, PID: 53.52(target of Myb protein 1-like isoform X2 {ECO:0000... [more]
A0A7J7HJJ3E-Value: 4.744e-13, PID: 68.82(Uncharacterized protein {ECO:0000313|EMBL:KAF5952... [more]
A0A1U7VVC5E-Value: 0.000e+0, PID: 52.79(target of Myb protein 1-like {ECO:0000313|RefSeq:... [more]
A0A1S3ZYU9E-Value: 0.000e+0, PID: 52.79(target of Myb protein 1-like isoform X1 {ECO:0000... [more]
back to top
Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
Loading content