Resource Type:
Polypeptide
Name:
XM_017398048.1
Identifier:
XM_017398048.1-protein
Sequence:
MQLLKNASIINSLKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIF
EAASPGKLNINQYGWTDGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVD
NYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLTKERKIPLTSQW
REKGNEGFDTAVSNVDVAHSSSSDGSPDDLVVDCNHSFEAYSDRRTIEES
EKDIMYMKLKEMAFKRLDPSLSVEDNVVTDGENSEHEGLLKKQAISEEKL
EITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIK
CLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQW
LSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYET
VESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEM
LDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDP
REHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAG
AWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQ
LTNLKAIGRRCFASAIVL
Sequence Length:
618
Sequence Checksum:
d41c8d5ddf6f5ae4e2f338e5f1facf2e
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017398048.1, derives from mRNA, XM_017398048.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
back to top
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6YV65 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222} (Fragment))
HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0
Identity = 370/630 (58.73%), Postives = 455/630 (72.22%), Query Frame = 0
Match: A0A5B6YV65 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222} (Fragment))
HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0
Identity = 370/630 (58.73%), Postives = 455/630 (72.22%), Query Frame = 0
Query: 5 KNASIINSL-KLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLTKE-----RKIPLTSQWREKGNEGFDTAVSNVDVAHSSSSDG-SPDDLVVDC----NHSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLDP----SLSVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIVL 618
KN +I L K GLPA H SYVKNIDPGLPLFLFNYS R+LHGIFEAAS G++NIN Y WT DG +T YP+QVQ+R+R+ CQ+L E+QFKPII DNY+ NHFWFELDHAQT RL+SLLSS+ +AP++ A Q T + R +P + RE+ +EG VD A+ +G S V C N EA D++ +E+ E+D++YMKLKE+A R + VE+ V + + EH+G L+ Q ISEEK E S D + QL + +EEL AFKTEQ QKM L+QKLV AE EI+ LKDRC++LES SN + D T E+ EL D++E ++L+GGYDG+ WLSALD+YSP D +KSL+PMN +YASVA+FN E+YVFGGGN +WY TVESY+PA WT PSL KGSLA AT+NNK+FA+GGGNG E +SDVEM D+DVG WI TRSM+HKRFA AA E N A+YA+GG+DG YL+S ERFDPREH WT I SM T+RGCHS VLNEK+Y LGGYDG MV S+EIFDPR G WMTGEPMNQ RGY+AAAV K+S+Y+IGG+ +NIV+T+ECY+EGQGWQ+TNLKAIG+RCF SAIVL
Sbjct: 82 KNGTIKECLFKQLLGLPAQHFSYVKNIDPGLPLFLFNYSDRKLHGIFEAASSGQMNINPYAWTMDGSERTQYPSQVQIRVRLHCQALIEDQFKPIIFDNYYSQNHFWFELDHAQTSRLMSLLSSLAVAPSSFAPQNTAKWRTLFRSLP-SPDMREE-SEGLKPPALEVDFAYCYKPNGKSGSSDVALCSDENNQLLEARLDQQVVEKDEEDLIYMKLKELALNRECSGSRLTNCVENTAVANDVHLEHQGFLEAQTISEEKNEENLANSFDYPFIITQLIQEMEELKAFKTEQIQKMGCLEQKLVEAEIEIRQLKDRCMMLESMSNPSIEPVDETVVESCNELHIDLDEVIFLVGGYDGVSWLSALDSYSPSQDVIKSLKPMNSFHSYASVAKFNGELYVFGGGNGCLWYNTVESYNPANNQWTLHPSLKEKKGSLASATLNNKIFAIGGGNGIECFSDVEMFDIDVGCWISTRSMLHKRFALAAAELNNALYAIGGYDGKDYLKSAERFDPREHAWTRIESMNTKRGCHSSVVLNEKIYVLGGYDGTAMVPSIEIFDPRLGTWMTGEPMNQSRGYSAAAVFKESIYVIGGVKAGDNIVDTVECYEEGQGWQVTNLKAIGKRCFFSAIVL 709
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LDZ8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7132300.1}))
HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 358/616 (58.12%), Postives = 447/616 (72.56%), Query Frame = 0
Match: A0A834LDZ8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7132300.1}))
HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 358/616 (58.12%), Postives = 447/616 (72.56%), Query Frame = 0
Query: 13 LKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQ-LTKERKIPLTSQWREKGNEGFDTAVSNVDVAHSSSSDGSPDDLVVDCNHSFEAYSDRRTIEESEKDIMYMKLKEMAF--KRLDPSLS-VEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGL-----DCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIVL 618
K GLPA H YVKNI+PG+PLFLFNY+ R+LHGIFEAASPG++N+N Y WT DG +T +PAQVQ+RL ++C L EEQFKPII DNY+ +NHFWFELDHAQ +L SLLSS+ IAP+T A Q TK R + ++ E + A DG+ D NH E +++ +E+ E D++YMKLKE+ +R +P L+ ++D+ + +S EGL Q SE E + + S D S +AQL + +EEL FK EQ KM L+QKLV AE+EIK LK RC+VLESR + +VA + A E F +LD D++E ++L+GGYDG WLSALD+YSP D +KSL+PMNC R+Y+SVAR N E+YVFGGGN S+WY++VESY PA WT RPSLN KGSL GAT+NNK+FA+GGGNG ES++DVEMLDLDVGRWI TRSM+ KRFA A E NGA+YAVGG+DG YLES ERFDPREH+WT IASM T+RGCHS+ VLNEKLYA+GGYDG EMV S+EIFDPR G+WM GEPM+Q RGY+ AAVLKDS+Y+IGG+ + E IV+ +E YKEGQGW++TNL+AIG RCF SAIVL
Sbjct: 57 FKQLFGLPAQHFCYVKNIEPGMPLFLFNYTDRKLHGIFEAASPGQMNLNPYAWTTDGSERTVFPAQVQIRLGLRCHPLSEEQFKPIISDNYYTTNHFWFELDHAQASKLSSLLSSMAIAPSTFAPQNSTKWRALFQAPPSHDRAKEIEEPFKPQAFEAGWRPLDGATLDA---NNHGLEDSFEKQVVEKPE-DLIYMKLKELVCNRERSNPPLADIQDSAAVNELHSGQEGLSDAQTNSERISEESLINSLDYPSVVAQLVQGMEELKVFKREQIHKMCCLEQKLVEAESEIKQLKHRCVVLESRLHPFVAHVEEMAVEPFNDLDLDLDELIFLVGGYDGASWLSALDSYSPSHDVIKSLKPMNCIRSYSSVARLNGELYVFGGGNGSLWYDSVESYDPASDHWTLRPSLNVQKGSLGGATLNNKIFAIGGGNGVESFADVEMLDLDVGRWIGTRSMLQKRFALAVAELNGALYAVGGYDGKDYLESAERFDPREHSWTKIASMNTKRGCHSMAVLNEKLYAIGGYDGSEMVPSVEIFDPRLGSWMIGEPMDQSRGYSCAAVLKDSLYVIGGVKPGGSEKHETIVDMVERYKEGQGWEVTNLRAIGERCFFSAIVL 668
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RXG4 ((Kelch-like protein {ECO:0000313|EMBL:PSS34725.1}))
HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 348/617 (56.40%), Postives = 431/617 (69.85%), Query Frame = 0
Match: A0A2R6RXG4 ((Kelch-like protein {ECO:0000313|EMBL:PSS34725.1}))
HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 348/617 (56.40%), Postives = 431/617 (69.85%), Query Frame = 0
Query: 13 LKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIA----PNTSALQLTKERKIPLTSQWREKGNEGFDTAVSNVDVAHSSSSDGSPDDLVVDCN-------HSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLDPSLSVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIV 617
K GLPA H YVKNI PGLPLFLFNYS R+LHGIFEAAS GK+NIN Y WT DG +T +PAQVQ+ +R++CQ L EEQFKPII+DNY+ NHFWFELDHAQT +L+SLLS IA P +A Q + P + +E+G +G V++ HSS S S D H E D++ +E+ E+D++YMKLKE+A R L + D V D + E + + EEK E + V S D S +AQL + +EEL FK EQ KM L++KLV AE EI+ L RC+ LES S VA D T ++ +L+PD++E ++L+GGYDG WLSALD+YSP D +K+L PMN R+YASVAR NDE YVFGGGN +WY+TVESY PA WT RPSLN KGSL GAT+NNK+FALGGGNG ES++DVEMLDLDVGRWI TRSM+ KRFA AA E NGA+YAVGG+DG YL+SVERFDPREH+WT I SM T+RGC S+ VLNEKLY +GG+DG MV S+EI+DPR G+W GEP+ Q RGY++AAVLKD++YI+GGL E+I E +E Y+EG+GWQ+TNLKAIG+R F S V
Sbjct: 51 FKQVFGLPAQHFPYVKNIGPGLPLFLFNYSDRKLHGIFEAASSGKMNINPYAWTTDGTERTIFPAQVQIHIRLRCQPLPEEQFKPIIIDNYYSQNHFWFELDHAQTSKLMSLLSCRAIASSTVPPRNATQWRTLFQAPPSHDRKEEG-DGIKPPAFEVEIPHSSKSSKSNGSSSSDIATCLDSNIHPLENCLDKQVVEK-EEDLIYMKLKELALSRERSDLPLSD--VEDSAVTGQEAFSEARTNLEEKNEESLVSSCDYPSIIAQLIQEIEELQVFKIEQIHKMGCLEEKLVEAEIEIQQLNQRCIALESLSQPSVACVDETTMDSSNDLEPDLDELIFLVGGYDGGSWLSALDSYSPTHDVIKTLNPMNSIRSYASVARLNDEFYVFGGGNGCLWYDTVESYDPANNQWTLRPSLNVKKGSLGGATLNNKIFALGGGNGVESFADVEMLDLDVGRWIFTRSMLEKRFALAAAELNGALYAVGGYDGNDYLKSVERFDPREHSWTRIESMNTKRGCPSMVVLNEKLYVIGGFDGSAMVPSIEIYDPRLGSWEMGEPIYQSRGYSSAAVLKDAIYILGGLKSDESIAEEVERYEEGKGWQVTNLKAIGKRSFFSVFV 663
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZHV6 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222})
HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 359/630 (56.98%), Postives = 456/630 (72.38%), Query Frame = 0
Match: A0A5J4ZHV6 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222})
HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 359/630 (56.98%), Postives = 456/630 (72.38%), Query Frame = 0
Query: 5 KNASIINSL-KLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLTKERKI---PLTSQWREKGNEGFDTAVSNVDVAHS-------SSSDGSPDDLVVDCNHSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLDP----SLSVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIVL 618
KN +I L K GLP H SYVKNIDPGLPLFLFNYS R+LHGIFEAAS G++NIN Y WT DG +T YPAQVQVR+R+ CQ+L E+QFKPIIVDNY+ NHFWFELDHAQT +L+SLLSS+ +AP+T A Q T + + L S + +EGF VD ++S SSD +P + + N EA+ ++ E+ E+D++Y KLKE+A R + VE+ V + + +H+ L+ ISEEK E + S D + QL + +EEL AFKTEQ QK + L+QKLV AE EI+ LK+RC++LES SN V D T +E+ EL D++E ++L+GGY+G WLSALD+YSP D +KS PMN R+YASVA+FN E+YVFGGG+ +WY+TVESY+PA WT PS+N KGSLAGAT+NNK+FA+GGGNG + +SDVEM D+DVGRWI TRSM+ KRFA AA E N A+YA+GG+DG YL+SVERFDPREHTWT I M T+RGCHSL VLNEK+Y LGGYDG MV S+EIFDPR G+WMTGEPMNQ RGY+AAAV+K+S+YIIGG+ +N V+T+E Y+EG+GW++TNL+AIG+R + SAIVL
Sbjct: 46 KNGTIKECLFKQLFGLPTQHFSYVKNIDPGLPLFLFNYSDRKLHGIFEAASSGQMNINSYAWTIDGSERTQYPAQVQVRVRLHCQALLEDQFKPIIVDNYYSQNHFWFELDHAQTSKLMSLLSSLAVAPSTFAPQNTAKWRTLFQTLPSPDMREESEGFKLPNLEVDFSYSYKPNGKLGSSDVAP--CIDENNQPLEAHLGQK--EKDEEDLIYTKLKELALNRECSGSRLTGGVEETAVANDVHMDHQCFLEPHTISEEKNEENLINSFDYPFIITQLIQEMEELKAFKTEQIQKTDCLEQKLVEAEIEIRQLKNRCMMLESMSNPSVEHVDETVTESCNELHIDLDEVIFLVGGYNGESWLSALDSYSPSRDVIKSFAPMNFIRSYASVAKFNGELYVFGGGHGCLWYDTVESYNPANNQWTLLPSMNEKKGSLAGATLNNKIFAIGGGNGVDCFSDVEMFDIDVGRWISTRSMLQKRFALAAAELNNALYAIGGYDGKDYLKSVERFDPREHTWTRIEGMNTKRGCHSLAVLNEKIYVLGGYDGTAMVPSIEIFDPRLGSWMTGEPMNQSRGYSAAAVVKESLYIIGGVITDDNNVDTVERYEEGRGWEVTNLRAIGKRSYFSAIVL 671
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6GXS9 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222})
HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 341/632 (53.96%), Postives = 440/632 (69.62%), Query Frame = 0
Match: F6GXS9 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222})
HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 341/632 (53.96%), Postives = 440/632 (69.62%), Query Frame = 0
Query: 5 KNASIINSL-KLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQ-----LTKERKIPLTSQWREKGNEGFDT-AVSNVDVAHSSSSD---GSPDDLVVDC----NHSFEAYSDRRTIEESEKDIMYMKLKEMAFKR----LDPSLSVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIV 617
KN++I L K GLPA H YVKN+DPGLPLFLFNYS R+LHGIFEAASPG++NIN YGWT DG +T YPAQVQ+R+R+QCQ L EEQF+PII DNY+ +HFWFELDHAQ +LISLLSS +AP+ S Q T R +PL + K EG D+ S +D AHS D GS D V C N EA SD++ +E EK ++ +KL+E+ R S VED+ V + + + +GL+K+Q + E++ E + V S D +AQL + EEL FK E Q+M Y++Q+L AE EI+ LK+ C++LES + ++ D T +E+F E++ D ++ ++L+GG DG WLS LD+YSP D KSL PM R+YASVA N E+Y+FGGGN S WY+TVE+Y+ WT R LN+ KGSLAGAT+N K+FALGGGNG E +SDV+M DLDVGRWIPTRSM+ KRFA A E NG +YAVGG+DG YL SVER DPREH+WT I MKT+RG H++ VLNEKLYA+GG+DG MV S+EI+DPR +WM G+ MNQ RGY+AAAV+ S+Y+IGG++ EN+V T+E Y+EG+GW++ AIG+RCFASAIV
Sbjct: 40 KNSTIKECLFKQLFGLPAQHFLYVKNVDPGLPLFLFNYSDRKLHGIFEAASPGQMNINPYGWTTDGAERTLYPAQVQIRVRLQCQPLPEEQFRPIIADNYYSQSHFWFELDHAQASKLISLLSSRAVAPSASVPQNSAAWRTLFRPLPLCN----KKEEGEDSKPPSKIDSAHSDQLDRKLGSSD--VAPCLDESNLPLEASSDKQVVENDEKGLILLKLQELVLNREYKDSSSSSYVEDSAVVNDSHLDDKGLVKEQMVLEDRNEDSPVSSSDFHPVIAQLIR--EELKGFKAEYIQRMSYMEQRLADAEKEIQQLKEHCMMLESICSPSMSLVDQTVNESFDEMNMDPDDLIFLVGGCDGESWLSTLDSYSPSQDMKKSLSPMTMPRSYASVAVLNGELYIFGGGNGSEWYDTVEAYNLVSNEWTLRAPLNKEKGSLAGATLNGKIFALGGGNGIECFSDVDMFDLDVGRWIPTRSMLQKRFALGAAELNGVLYAVGGYDGKDYLNSVERLDPREHSWTRIGGMKTKRGSHTVVVLNEKLYAMGGFDGNTMVPSVEIYDPRVDSWMDGDSMNQSRGYSAAAVVNKSIYVIGGVEDGENVVGTVELYEEGEGWRVIKQTAIGKRCFASAIV 663
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GK30 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222})
HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 341/617 (55.27%), Postives = 440/617 (71.31%), Query Frame = 0
Match: A0A7J7GK30 (DCD domain-containing protein {ECO:0000259|PROSITE:PS51222})
HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 341/617 (55.27%), Postives = 440/617 (71.31%), Query Frame = 0
Query: 13 LKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQ-LTKERKIPLT--SQWREKGNEGFDTAVSNVDVAHSSSSDG-SPDDLVVDC---NHSFEAYSDRRTIEESEKDIMYMKLKEMAF--KRLDPSL-SVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIVL 618
K GLPA H SYVKN+DPGLPLFLFNYS R+LHGIFEAAS G++NIN Y WT DG +T YPAQVQVR+R+ C+ L EEQFK +I+DNY+ NHFWFELDHAQT +L+SLLSS+ +A +T + Q TK R + S R++ EG VD + +G D+ NH E ++ +E+ E+D++YMKLKE+A +R DP L VED +G +S H+GL + Q S+E+ + + S D S ++QL + +EEL AFK EQ KM YL+QKLV AE EI+ LK RC++LE S+ + D A E+ + + D++ +YL+GGY+G+ WLSALD+YSP D +KSL+PMN RAY S+A N E+YVFGGGN ++W +TVESY PA W RPSLN KGSLAGAT+NN++FA+GG NG + Y+DVEM DLDVGRWI +RSM+ KRFA AA E NGAIYAVGG++G YL+S ERFDPREH+W I M T RGCH++ VLNEKLY +GG+DG +MVSS+EIFDPR G+WM GEP++Q RGY+AAAV K+S+YI GG+ E+IV T+E Y+EG+GWQ+TNLKA+G+R F SA VL
Sbjct: 54 FKQLFGLPAQHFSYVKNVDPGLPLFLFNYSDRKLHGIFEAASSGQMNINPYAWTTDGSERTLYPAQVQVRVRLHCRPLPEEQFKLVIIDNYYSQNHFWFELDHAQTSKLMSLLSSLAVASSTFSPQNTTKWRTLSQAPPSHDRKEEIEGLMPLALEVDFPYFYDGNGLGSSDVTTHLDRNNHPLEDCLVKQVVEK-EEDLIYMKLKELALNRQRSDPPLMDVEDIATVNGVHSRHKGLSEAQTNSDERNGQSLINSFDYPSVISQLMQGMEELNAFKIEQIHKMGYLEQKLVEAEIEIQELKQRCMMLECTSHPSAVRIDEMAMESVNDPELDLDGLIYLVGGYNGVSWLSALDSYSPTKDVIKSLKPMNHGRAYVSIAWLNGELYVFGGGNGNLWVDTVESYDPANNQWHLRPSLNGEKGSLAGATLNNRIFAMGGANGVDCYADVEMFDLDVGRWISSRSMLQKRFALAAAELNGAIYAVGGYNGKEYLKSAERFDPREHSWAKIEGMSTPRGCHAMAVLNEKLYVIGGHDGNKMVSSMEIFDPRLGSWMVGEPISQSRGYSAAAVCKESIYIFGGVKTEEDIVNTVERYEEGKGWQVTNLKAVGKRAFFSATVL 669
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A833XUX1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5471487.1}))
HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0
Identity = 345/642 (53.74%), Postives = 438/642 (68.22%), Query Frame = 0
Match: A0A833XUX1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5471487.1}))
HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0
Identity = 345/642 (53.74%), Postives = 438/642 (68.22%), Query Frame = 0
Query: 13 LKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLTKE-----RKIPLTSQWREKGNEGFDTAVSNVDVAHSSSSDGSPDDLVV--DCNHSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLD---PSL-SVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTEL-------DP------------------DINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIV 617
LK GLPA H SYVKNIDPGLPLFLFNYS R+L GIFEAASPG++NIN YGWT DG +T YPAQVQ+ +R CQ L E QFKPII DNY+ HFWFELDHAQ RL+SL + + +AP+TS + T + + PL + EKG EGF +++ HS+ S D N EA+SD + +E+ EK+++ MKLKE+A R P+L +VED V +G EH+ ++Q +E+K E S + S + QL + V+EL AF TEQ+QK+ L+QKL+ AE EI LKD ++LE SN G++T EA EL +P D NE +YLIGGYDG WLS+L++Y P D +KSL+PM+ R+Y+S A+ N E+YVFGGGN VWY+TVESY+PA WT +P LN+ KGSLAGAT++NK+FA+GGGNG +S+S+VEMLDLD+GRWI TRSM+ KRFA AA E NG +YA GG+DG YL S ERFDPREH+WT IASM T+RG HSL V NEKLYALGGYDG MV S+EIFDPR G+W+ GEPM RGY+AA V+KDS+Y+IGG+ +++T+E YK+GQGWQ T+ KA+G+RCF SAIV
Sbjct: 66 LKQLFGLPAQHFSYVKNIDPGLPLFLFNYSNRKLSGIFEAASPGQMNINPYGWTTDGSERTLYPAQVQILVRKHCQPLPENQFKPIISDNYYTETHFWFELDHAQATRLMSLFAPLAVAPSTSVPRNTAKWRAIFQAFPL-NDVVEKG-EGFKPLT--LEIKHSNHSSQKLDVAYAFDGYNQISEAHSDVKLVEQDEKEVIVMKLKELARCREHQDLPTLRNVEDTAVMNGIQLEHKYFQREQTGAEDKNEDNPQSSSECQSIITQLIQEVQELKAFNTEQTQKIGILEQKLMEAEMEILLLKDHRVMLEPVSNPSDTLGNDTIIEAIDELHMDQSVSNPSEELVNETVIDSLDELHLDPNESIYLIGGYDGESWLSSLNSYHPSQDMIKSLRPMSSVRSYSSAAQLNGELYVFGGGNGYVWYDTVESYNPANDEWTLQPPLNQEKGSLAGATIDNKIFAIGGGNGMKSFSEVEMLDLDIGRWISTRSMLEKRFALAAAELNGVLYATGGYDGNDYLNSAERFDPREHSWTRIASMNTKRGSHSLVVFNEKLYALGGYDGNTMVPSVEIFDPRQGSWICGEPMVNPRGYSAAGVIKDSIYVIGGIKMCGTVIDTVETYKDGQGWQETHTKALGKRCFTSAIV 703
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5YVM9 ((kelch-like protein 12 isoform X1 {ECO:0000313|RefSeq:XP_022744290.1}))
HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 351/648 (54.17%), Postives = 438/648 (67.59%), Query Frame = 0
Match: A0A6P5YVM9 ((kelch-like protein 12 isoform X1 {ECO:0000313|RefSeq:XP_022744290.1}))
HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 351/648 (54.17%), Postives = 438/648 (67.59%), Query Frame = 0
Query: 12 SLKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLTKE-----RKIPLTSQWREKGNEGF-----------------DTAV--------------SNVDVAHSSSSDGSPDDLVVDCNHSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLDPSLS----VEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIVL 618
S +LF GLP+ H SYVKNIDPGLPLFLFNYS R+LHGIFEAAS G++NIN YGWT DG KT YPAQVQ+R+R+QCQ L EEQF+PII NY+ SNHFWFELDHAQT +L+SLL+S+ ++P+T Q T + + +P T E EGF DT V S +V H S S G D S E D +T + EKD++ KLKE+A KR D +S VED+ T + E +G L++Q +K E + S S +AQL + +EEL FK EQ KM ++QKLV AE EI+ LKDRCL+LES SN V + A E EL D E ++L+GGYDG WLSALD+Y P D +KS+QPM+ R+YAS A+ N E+YVFGGG+ WY+TVESY P+ WT PSL KGSLAGA ++ K+FA+GGGNG E +SDVEMLD VGRWI RSM+ KRFA AA+E NGAIYA GG+DG YL S ERFDPREH+WT IASM T+RGCHSL VL+EKLYA+GG+DG +MV S+EIFDPR G+W +G+P+NQ RGYAAAAV+K S+Y+IGGL E+IV+++EC+KEG+GWQ+ +A+G+RCF SAIV
Sbjct: 54 SSQLF-GLPSQHFSYVKNIDPGLPLFLFNYSDRKLHGIFEAASHGQMNINPYGWTTDGSEKTQYPAQVQIRVRLQCQPLLEEQFRPIIAGNYYCSNHFWFELDHAQTSKLLSLLASLAVSPSTYLPQNTAKWRYIFQALPSTCTKGEGEGEGFRPLAPEMEHSNHSSGKLDTDVYFDEVKVADEGFKFSASEVEHFSQSSGKSDSTDSAPFDSLETQVDAKTTGQDEKDLILTKLKELAQKRRDQDVSLSENVEDSTRTKETHFEEKGFLREQMDLVQKNEDPACSSSHCQSTIAQLVQGIEELRTFKEEQCVKMIQMEQKLVAAEMEIQQLKDRCLMLESLSNYSVEHVNGKAIEPSEELQLDPTESIFLVGGYDGESWLSALDSYFPSQDVIKSVQPMSSVRSYASAAQLNGELYVFGGGDGYSWYDTVESYSPSSDQWTLCPSLKEKKGSLAGAALDGKIFAIGGGNGVECFSDVEMLDFVVGRWINARSMLQKRFALAAMELNGAIYATGGYDGNDYLNSAERFDPREHSWTKIASMSTKRGCHSLVVLDEKLYAIGGFDGTKMVPSVEIFDPRLGSWTSGDPINQPRGYAAAAVVKGSIYVIGGLRAGEDIVDSVECFKEGEGWQVKTTEAVGKRCFLSAIVF 700
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1ASN9 ((kelch-like protein 5 isoform X1 {ECO:0000313|RefSeq:XP_021289494.1}))
HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0
Identity = 344/644 (53.42%), Postives = 433/644 (67.24%), Query Frame = 0
Match: A0A6J1ASN9 ((kelch-like protein 5 isoform X1 {ECO:0000313|RefSeq:XP_021289494.1}))
HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0
Identity = 344/644 (53.42%), Postives = 433/644 (67.24%), Query Frame = 0
Query: 14 KLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLT-KERKI--PLTSQWREKGNEGF-------------------DTAVSNVDVA------------HSSSSDGSPDDLVVDCNHSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLDPSLS----VEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTELDPDINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIVL 618
+LF GLPA H S+VKNIDPGLPLFLFNY+ R+LHGIFEAAS G++NIN YGWT DG KT YPAQVQ+R+R+ CQ L EEQF+PII DNY+ NHFWFELDH QT +L+SLL+S+ ++P+T T K R I L S EGF D + VA H S S G D S EA+ D +T + EKD + +KLKE+A KR D +S VED+ V G + E ++Q + E + S S +AQL + +EEL FK EQS KM ++QKLV AE EI+ LK RCL+LES SN V + A E+ EL D E ++L+GGYDG WL+ALD+Y P D +KS+ PM+ R+YAS A+ N ++YVFGGG+ WY+TVESY P+R WT PSL KGSLAGA ++ K+FA+GGGNG + ++DVEMLD +GRWI TRSM+ KRFA AAVE NG IYA GG+DG YL+S ERFDPREH+WT IASM T+RGCHSL VL+E+LYA+GG+DG +MV S+EIFDPR G+WM+GEP+NQ RGYAAAAV+K S+Y+IGGL E+IV+++EC+KEGQGW+L KA+G+RCF SAI L
Sbjct: 56 QLF-GLPAQHFSFVKNIDPGLPLFLFNYTDRKLHGIFEAASRGQMNINPYGWTTDGSEKTQYPAQVQIRVRLHCQPLLEEQFRPIIADNYYCRNHFWFELDHTQTSKLMSLLASLAVSPSTYLPHNTAKWRNIFQALPSTGTNGEGEGFRQLATEMEHSNHSSKKSDTDVYFDEIKVADEGYKPPAQEVEHFSQSSGKSDSTDFTPFDSLEAHVDAKTTGQDEKDFILIKLKELAQKRKDQDVSLMNNVEDSTVMKGTHFEDSVSSREQMDLVPETEDAACSSSQCQSVIAQLIQGMEELRTFKAEQSVKMIQMEQKLVAAEMEIQKLKVRCLMLESLSNDSVEHVNGQAIESSEELQLDPTESIFLVGGYDGESWLAALDSYFPSQDVIKSVHPMSSVRSYASTAQLNGDLYVFGGGDGYSWYDTVESYSPSRNQWTLCPSLKDKKGSLAGAALDGKIFAIGGGNGVQCFADVEMLDSILGRWINTRSMLQKRFALAAVELNGTIYATGGYDGNDYLKSAERFDPREHSWTKIASMSTKRGCHSLAVLDERLYAIGGFDGTKMVPSVEIFDPRLGSWMSGEPINQARGYAAAAVVKGSIYVIGGLRAGEDIVDSVECFKEGQGWELKTTKAVGKRCFLSAIAL 698
BLAST of XM_017398048.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4F3D6 ((kelch-like protein 4 {ECO:0000313|RefSeq:XP_018826149.1, ECO:0000313|RefSeq:XP_035545442.1}))
HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0
Identity = 345/642 (53.74%), Postives = 438/642 (68.22%), Query Frame = 0
Match: A0A2I4F3D6 ((kelch-like protein 4 {ECO:0000313|RefSeq:XP_018826149.1, ECO:0000313|RefSeq:XP_035545442.1}))
HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0
Identity = 345/642 (53.74%), Postives = 438/642 (68.22%), Query Frame = 0
Query: 13 LKLFSGLPAPHMSYVKNIDPGLPLFLFNYSTRRLHGIFEAASPGKLNINQYGWT-DGLVKTSYPAQVQVRLRVQCQSLHEEQFKPIIVDNYFKSNHFWFELDHAQTDRLISLLSSVVIAPNTSALQLTKE-----RKIPLTSQWREKGNEGFDTAVSNVDVAHSSSSDGSPDDLVV--DCNHSFEAYSDRRTIEESEKDIMYMKLKEMAFKRLD---PSL-SVEDNVVTDGENSEHEGLLKKQAISEEKLEITSVKSQDDLSGLAQLTKRVEELTAFKTEQSQKMEYLQQKLVHAETEIKCLKDRCLVLESRSNTYVAKGDNTASEAFTEL-------DP------------------DINEFMYLIGGYDGLQWLSALDTYSPLLDTVKSLQPMNCARAYASVARFNDEIYVFGGGNCSVWYETVESYHPARKTWTSRPSLNRVKGSLAGATVNNKLFALGGGNGHESYSDVEMLDLDVGRWIPTRSMIHKRFAFAAVEHNGAIYAVGGFDGTRYLESVERFDPREHTWTSIASMKTQRGCHSLTVLNEKLYALGGYDGKEMVSSLEIFDPRAGAWMTGEPMNQQRGYAAAAVLKDSMYIIGGLDCRENIVETIECYKEGQGWQLTNLKAIGRRCFASAIV 617
LK GLPA H SYVKNIDPGLPLFLFNYS R+L GIFEAASPG++NIN YGWT DG +T YPAQVQ+ +R CQ L E QFKPII DNY+ HFWFELDHAQ RL+SL + + +AP+TS + T + + PL + EKG EGF +++ HS+ S D N EA+SD + +E+ EK+++ MKLKE+A R P+L +VED V +G EH+ ++Q +E+K E S + S + QL + V+EL AF TEQ+QK+ L+QKL+ AE EI LKD ++LE SN G++T EA EL +P D NE +YLIGGYDG WLS+L++Y P D +KSL+PM+ R+Y+S A+ N E+YVFGGGN VWY+TVESY+PA WT +P LN+ KGSLAGAT++NK+FA+GGGNG +S+S+VEMLDLD+GRWI TRSM+ KRFA AA E NG +YA GG+DG YL S ERFDPREH+WT IASM T+RG HSL V NEKLYALGGYDG MV S+EIFDPR G+W+ GEPM RGY+AA V+KDS+Y+IGG+ +++T+E YK+GQGWQ T+ KA+G+RCF SAIV
Sbjct: 54 LKQLFGLPAQHFSYVKNIDPGLPLFLFNYSNRKLSGIFEAASPGQMNINPYGWTTDGSERTLYPAQVQILVRKHCQPLPENQFKPIISDNYYTETHFWFELDHAQATRLMSLFAPLAVAPSTSVPRNTAKWRAIFQAFPL-NDVVEKG-EGFKPLT--LEIKHSNHSSQKLDVAYAFDGYNQISEAHSDVKLVEQDEKEVIVMKLKELARCREHQDLPTLRNVEDTAVMNGIQLEHKYFQREQTGAEDKNEDNPQSSSECQSIITQLIQEVQELKAFNTEQTQKIGILEQKLMEAEMEILLLKDHRVMLEPVSNPSDTLGNDTIIEAIDELHMDQSVSNPSEELVNETVIDSLDELHLDPNESIYLIGGYDGESWLSSLNSYHPSQDMIKSLRPMSSVRSYSSAAQLNGELYVFGGGNGYVWYDTVESYNPANDEWTLQPPLNQEKGSLAGATIDNKIFAIGGGNGMKSFSEVEMLDLDIGRWISTRSMLEKRFALAAAELNGVLYATGGYDGNDYLNSAERFDPREHSWTRIASMNTKRGSHSLVVFNEKLYALGGYDGNTMVPSVEIFDPRQGSWICGEPMVNPRGYSAAGVIKDSIYVIGGIKMCGTVIDTVETYKDGQGWQETHTKALGKRCFTSAIV 691
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6YV65 | E-Value: 0.000e+0, PID: 58.73 | DCD domain-containing protein {ECO:0000259|PROSITE... [more] |
| A0A834LDZ8 | E-Value: 0.000e+0, PID: 58.12 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7132... [more] |
| A0A2R6RXG4 | E-Value: 0.000e+0, PID: 56.40 | (Kelch-like protein {ECO:0000313|EMBL:PSS34725.1})[more] |
| A0A5J4ZHV6 | E-Value: 0.000e+0, PID: 56.98 | DCD domain-containing protein {ECO:0000259|PROSITE... [more] |
| F6GXS9 | E-Value: 0.000e+0, PID: 53.96 | DCD domain-containing protein {ECO:0000259|PROSITE... [more] |
| A0A7J7GK30 | E-Value: 0.000e+0, PID: 55.27 | DCD domain-containing protein {ECO:0000259|PROSITE... [more] |
| A0A833XUX1 | E-Value: 0.000e+0, PID: 53.74 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5471... [more] |
| A0A6P5YVM9 | E-Value: 0.000e+0, PID: 54.17 | (kelch-like protein 12 isoform X1 {ECO:0000313|Ref... [more] |
| A0A6J1ASN9 | E-Value: 0.000e+0, PID: 53.42 | (kelch-like protein 5 isoform X1 {ECO:0000313|RefS... [more] |
| A0A2I4F3D6 | E-Value: 0.000e+0, PID: 53.74 | (kelch-like protein 4 {ECO:0000313|RefSeq:XP_01882... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |