Resource Type:
Polypeptide
Name:
XM_017398029.1
Identifier:
XM_017398029.1-protein
Sequence:
MTMCSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAK
WKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHIS
PLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEV
SSVARSASHSNFNILLHLKAPISGEQHNGEDQAISNSQNPRAPVDLVTVL
DISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMT
DAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSD
GQDTYTITSPRTNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAV
SMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNP
SLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYS
ADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQR
NRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVA
LGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTL
MHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR
Sequence Length:
643
Sequence Checksum:
8b67e28be561d2ac275247e7449f6cb4
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017398029.1, derives from mRNA, XM_017398029.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6GU18 ((Uncharacterized protein {ECO:0000313|EMBL:CCB43682.1}))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 479/646 (74.15%), Postives = 547/646 (84.67%), Query Frame = 0
Match: F6GU18 ((Uncharacterized protein {ECO:0000313|EMBL:CCB43682.1}))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 479/646 (74.15%), Postives = 547/646 (84.67%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPI-SGEQHNGEDQA--ISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPR-TNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYF--GSPSPQLPARPARSFSTQPQPR 643
C+ICL TMKPGQGHAIFTAECSH+FHFHCIT+NVKHG+Q CPVCRAKWKE+PFQSPASDL+ R+RI+ W D+ WMTV+++LP R DA+RHIS L AHEP+VFDDDE++DHQ E T +SSS + SIGAIE+KTYPEVS+V RS SH+NF +L+HLKAP+ SG Q++G +Q SQ+ RAPVDLVTVLD+SGSMAGTKL LLKRAMGFVIQ+LGP DRLSVI+FSSTARRLFPLRRMTD GRQ+ALQAVN+L+SNGGTNIAEGLRKGAKVM DRK K+PVSSIILLSDGQDTYT+ SP +SRTDY LLP S+ R G G IPVH+FGFG DHDA SMH+ISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQEL+V V+CV+PSL L+SIKAG+Y ++VT DARTGFI+VGDLYAEEERDFLV +DIP++ +M+L V+ Y+DPITKELV E+ V IQRPE A Q+ VSMEVDRQRNRL AAEAM EARAAAERGDLT+AV+VLE CR+ LSETVSA+AGDRLCVALGAELKEMQERMANRR+YE+SGRAYVLSGLSSHSWQRATARGDS DS TL+ AYQTPSMVDM+TRSQTM+ G+PSP P RPARSF +P PR
Sbjct: 85 CAICLNTMKPGQGHAIFTAECSHAFHFHCITSNVKHGSQSCPVCRAKWKEIPFQSPASDLAHGRARINPVDWGHDDAWMTVLRQLPSPRQDASRHISSLFHAHEPAVFDDDEVLDHQPESTERSSSTRDI-DNNSIGAIEVKTYPEVSAVPRSTSHNNFTVLIHLKAPLTSGRQNSGTNQTNMQPTSQSCRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIQSLGPCDRLSVISFSSTARRLFPLRRMTDTGRQQALQAVNSLVSNGGTNIAEGLRKGAKVMLDRKWKNPVSSIILLSDGQDTYTVCSPGGAHSRTDYSLLLPFSIHRNGGTGFQIPVHAFGFGTDHDATSMHAISETSGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELRVGVECVHPSLQLSSIKAGSYHTSVTPDARTGFIDVGDLYAEEERDFLVNIDIPINGCGDEMSLFKVRCVYRDPITKELVKCGEADEVKIQRPEIARQVVVSMEVDRQRNRLRAAEAMVEARAAAERGDLTSAVAVLESCRRALSETVSARAGDRLCVALGAELKEMQERMANRRIYEASGRAYVLSGLSSHSWQRATARGDSTDSATLLQAYQTPSMVDMLTRSQTMFVSSGAPSPHPPIRPARSFPARPLPR 729
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438IKR6 ((Uncharacterized protein sll0103 {ECO:0000313|EMBL:RVW97287.1}))
HSP 1 Score: 964.14 bits (2491), Expect = 0.000e+0
Identity = 477/646 (73.84%), Postives = 545/646 (84.37%), Query Frame = 0
Match: A0A438IKR6 ((Uncharacterized protein sll0103 {ECO:0000313|EMBL:RVW97287.1}))
HSP 1 Score: 964.14 bits (2491), Expect = 0.000e+0
Identity = 477/646 (73.84%), Postives = 545/646 (84.37%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPI-SGEQHNGEDQA--ISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPR-TNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYF--GSPSPQLPARPARSFSTQPQPR 643
C+ICL TMKPGQGHAIFTAECSH+FHFHCIT+NVKHG+Q CPVCRAKWKE+PFQSPASDL+ R+RI+ W D+ WMTV+++LP R DA+RHIS L AHEP+VFDDDE++D Q E T +SSS + SIGAIE+KTYPEVS+V RS SH+NF +L+HLKAP+ SG Q++G +Q SQ+ RAPVDLVTVLD+SGSMAGTKL LLKRAMGFVIQ+LGP DRLSVI+FSSTARRLFPLRRMTD GRQ+ALQAVN+LISNGGTNIAEGLRKGAKVM DRK K+PVSSIILLSDGQDTYT+ SP +SRTDY LLP S+ R G G IPVH+FGFG DHDA SMH+ISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQEL+V V+CV+PSL L+SIKAG+Y ++VT DARTGFI+VGDLYAEEERDFLV ++IP++ +M+L V+ Y+DPITKELV E+ V IQRPE A Q+ V MEVDRQRNRL AAEAM EARAAAERGDLT+AV+VLE CR+ LSETVSA+AGDRLCVALGAELKEMQERMANRR+YE+SGRAYVLSGLSSHSWQRATARGDS DS TL+ AYQTPSMVDM+TRSQTM+ G+PSP P RPARSF +P PR
Sbjct: 85 CAICLNTMKPGQGHAIFTAECSHAFHFHCITSNVKHGSQSCPVCRAKWKEIPFQSPASDLAHGRARINPVDWGHDDAWMTVLRQLPSPRQDASRHISSLFHAHEPAVFDDDEVLDQQLESTERSSSTRDI-DNNSIGAIEVKTYPEVSAVPRSTSHNNFTVLIHLKAPLTSGRQNSGTNQTNMQPTSQSCRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIQSLGPCDRLSVISFSSTARRLFPLRRMTDTGRQQALQAVNSLISNGGTNIAEGLRKGAKVMLDRKWKNPVSSIILLSDGQDTYTVCSPGGAHSRTDYSLLLPFSIHRNGGTGFQIPVHAFGFGTDHDATSMHAISETSGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELRVGVECVHPSLQLSSIKAGSYHTSVTPDARTGFIDVGDLYAEEERDFLVNINIPINGSGDEMSLFKVRCVYRDPITKELVKCGEADEVKIQRPEIARQVVVCMEVDRQRNRLRAAEAMVEARAAAERGDLTSAVAVLESCRRALSETVSARAGDRLCVALGAELKEMQERMANRRIYEASGRAYVLSGLSSHSWQRATARGDSTDSATLLQAYQTPSMVDMLTRSQTMFVSSGAPSPHPPIRPARSFPARPLPR 729
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5BI34 ((Uncharacterized protein {ECO:0000313|EMBL:CAN61381.1}))
HSP 1 Score: 963.755 bits (2490), Expect = 0.000e+0
Identity = 477/646 (73.84%), Postives = 545/646 (84.37%), Query Frame = 0
Match: A5BI34 ((Uncharacterized protein {ECO:0000313|EMBL:CAN61381.1}))
HSP 1 Score: 963.755 bits (2490), Expect = 0.000e+0
Identity = 477/646 (73.84%), Postives = 545/646 (84.37%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPI-SGEQHNGEDQA--ISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPR-TNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYF--GSPSPQLPARPARSFSTQPQPR 643
C+ICL TMKPGQGHAIFTAECSH+FHFHCIT+NVKHG+Q CPVCRAKWKE+PFQSPASDL+ R+RI+ W D+ WMTV+++LP R DA+RHIS L AHEP+VFDDDE++D Q E T +SSS + SIGAIE+KTYPEVS+V RS SH+NF +L+HLKAP+ SG Q++G +Q SQ+ RAPVDLVTVLD+SGSMAGTKL LLKRAMGFVIQ+LGP DRLSVI+FSSTARRLFPLRRMTD GRQ+ALQAVN+LISNGGTNIAEGLRKGAKVM DRK K+PVSSIILLSDGQDTYT+ SP +SRTDY LLP S+ R G G IPVH+FGFG DHDA SMH+ISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQEL+V V+CV+PSL L+SIKAG+Y ++VT DARTGFI+VGDLYAEEERDFLV ++IP++ +M+L V+ Y+DPITKELV E+ V IQRPE A Q+ V MEVDRQRNRL AAEAM EARAAAERGDLT+AV+VLE CR+ LSETVSA+AGDRLCVALGAELKEMQERMANRR+YE+SGRAYVLSGLSSHSWQRATARGDS DS TL+ AYQTPSMVDM+TRSQTM+ G+PSP P RPARSF +P PR
Sbjct: 85 CAICLNTMKPGQGHAIFTAECSHAFHFHCITSNVKHGSQSCPVCRAKWKEIPFQSPASDLAHGRARINPVDWGHDDAWMTVLRQLPSPRQDASRHISSLFHAHEPAVFDDDEVLDXQXESTERSSSTRD-IDNNSIGAIEVKTYPEVSAVPRSTSHNNFTVLIHLKAPLTSGRQNSGTNQTNMQPTSQSCRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIQSLGPCDRLSVISFSSTARRLFPLRRMTDTGRQQALQAVNSLISNGGTNIAEGLRKGAKVMLDRKWKNPVSSIILLSDGQDTYTVCSPGGAHSRTDYSLLLPFSIHRNGGTGFQIPVHAFGFGTDHDATSMHAISETSGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELRVGVECVHPSLQLSSIKAGSYHTSVTPDARTGFIDVGDLYAEEERDFLVNIBIPINGXGDEMSLFKVRCVYRDPITKELVKCGEADEVKIQRPEIARQVVVCMEVDRQRNRLRAAEAMVEARAAAERGDLTSAVAVLESCRRALSETVSARAGDRLCVALGAELKEMQERMANRRIYEASGRAYVLSGLSSHSWQRATARGDSTDSATLLQAYQTPSMVDMLTRSQTMFVSSGAPSPHPPIRPARSFPARPLPR 729
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BN18 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544076.1}))
HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0
Identity = 489/644 (75.93%), Postives = 548/644 (85.09%), Query Frame = 0
Match: A0A5J5BN18 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544076.1}))
HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0
Identity = 489/644 (75.93%), Postives = 548/644 (85.09%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQHN-GEDQA--ISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITS-PRTNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICLTTMKPGQGHAIFTAECSHSFHFHCIT++VKHGNQICP+CRAKWKE+PFQSPASDL R+RI+ WP D+ WMTV++RLP + DANRHIS L A EP VFDDDEL+DHQ E+ + + D D SIGAIE+K YPEVS+V++S SH+NF IL+HLKAP + + N G +QA SQN RA VDLVTVLD+SGSMAGTKL LLKRAMGFVIQ+LGPSDRLSVIAFSSTARRLFPLRRMTD GRQEALQAVN+LISNGGTNIAEGLRKGAKVM DRK K+PVSSIILLSDGQDTYT++S + RT YQSLLP S+ G GPHIPVH+FGFG DHDA +MHSISE SGGTFSFIEAE+VIQDAFAQCIGGLLSVVVQELQV ++CV+P L L SIKAG+YKS V +DAR GFI+VGDLYAEEERDFLV +DIPVD S +M+L+ VK Y+DPITKELV+ EE V I RPE GQLSVSMEVDRQRNRL AAEA+AEARAAAERGDL AAV +LE CRK LSETVSA+AGD+LCVALGAELKEMQERMANRRVYE+SGRAYVLSGLSSHSWQRATARGDS DST+L+ +YQTPSMV+MVTRSQTMYFGS SP+ RPARSF ++PQPR
Sbjct: 81 CAICLTTMKPGQGHAIFTAECSHSFHFHCITSSVKHGNQICPICRAKWKEIPFQSPASDLPHGRARINPVAWPHDDAWMTVLRRLPTTHTDANRHISSLCHAPEPGVFDDDELVDHQPEIASSLAKD---ADDHSIGAIEVKIYPEVSAVSKSVSHNNFTILIHLKAPCTSRRQNCGINQANFPPVSQNSRASVDLVTVLDVSGSMAGTKLALLKRAMGFVIQHLGPSDRLSVIAFSSTARRLFPLRRMTDTGRQEALQAVNSLISNGGTNIAEGLRKGAKVMVDRKWKNPVSSIILLSDGQDTYTVSSLGGAHPRTGYQSLLPFSIHHNGGTGPHIPVHAFGFGVDHDAAAMHSISETSGGTFSFIEAENVIQDAFAQCIGGLLSVVVQELQVRIECVHPRLQLGSIKAGSYKSNVMSDARMGFIDVGDLYAEEERDFLVTVDIPVDGSSNEMSLLKVKCVYRDPITKELVNSEEGNEVKIHRPEMTGQLSVSMEVDRQRNRLQAAEAIAEARAAAERGDLAAAVYILECCRKVLSETVSAQAGDQLCVALGAELKEMQERMANRRVYEASGRAYVLSGLSSHSWQRATARGDSTDSTSLVQSYQTPSMVNMVTRSQTMYFGSSSPKPSLRPARSFPSRPQPR 721
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C5Z1 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8550376.1}))
HSP 1 Score: 956.822 bits (2472), Expect = 0.000e+0
Identity = 484/646 (74.92%), Postives = 545/646 (84.37%), Query Frame = 0
Match: A0A5J5C5Z1 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8550376.1}))
HSP 1 Score: 956.822 bits (2472), Expect = 0.000e+0
Identity = 484/646 (74.92%), Postives = 545/646 (84.37%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQHN---GEDQAISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSP---RTNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICLTTMKPGQGHAIFTAECSHSFHFHCI +NVKHGNQICP+CRAKWKE+PFQSP SDLS R+R + W D+ WMTV++RLP R DA+RHIS L A EP V++DDEL+DHQ EVT SSS D SIGAIE+K YPEVS+V+ SASH+NFN+L+HLKAPI+ + N + S S+N RAP+DLVTVLD+SGSMAGTKL LLKRAMGFVIQ+LGPSDRLSVIAFSSTARRLFPLRRM D GRQEALQAVN LISNGGTNIAEGLRKGA+V+ DRK K+PVSSIILLSDGQDTYT+ SP R ++RT+YQSLLP S+ R G G HIPVH+FGFGADHDA SMHSISE SGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQV V+CV+P L L SIKAG+YK++V +DAR GFI +GDLYAEEERDFLV +DIP+D S +M+L+ VK YKDPITKELV+LEE+ V I RP+ G SVSMEVDRQRNR AAEA+AEAR AAERGDL AVS+LE CRK LSETVSA+AGD+LCVALGAEL+EMQ+RMANRRVYE+SGRAYVLSGLSSHS QRATARGDS DST+L+ AYQTPSMVDMVTRSQTM+FGS SPQ RPARSF +PQPR
Sbjct: 85 CAICLTTMKPGQGHAIFTAECSHSFHFHCIASNVKHGNQICPICRAKWKEIPFQSPTSDLSQGRARSNPVAWSHDDTWMTVLRRLPSPRADAHRHISTLFHAPEPGVYNDDELVDHQPEVTDTSSSTKD-VDDHSIGAIEVKIYPEVSAVSNSASHNNFNVLIHLKAPITSRRQNCRINQANFPSISRNSRAPIDLVTVLDVSGSMAGTKLALLKRAMGFVIQHLGPSDRLSVIAFSSTARRLFPLRRMHDMGRQEALQAVNGLISNGGTNIAEGLRKGARVVVDRKWKNPVSSIILLSDGQDTYTVGSPGGDRAHTRTNYQSLLPISIHRNGGTGLHIPVHAFGFGADHDAASMHSISETSGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVGVECVHPRLRLGSIKAGSYKTSVMSDARMGFINIGDLYAEEERDFLVTVDIPIDGSSNEMSLLKVKCVYKDPITKELVNLEEANEVKILRPKITGPQSVSMEVDRQRNRHRAAEAIAEARTAAERGDLAGAVSILESCRKVLSETVSAQAGDQLCVALGAELREMQDRMANRRVYEASGRAYVLSGLSSHSLQRATARGDSTDSTSLLQAYQTPSMVDMVTRSQTMFFGSTSPQPSVRPARSFPARPQPR 729
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2QXH6 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p021482:mrna}))
HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0
Identity = 463/644 (71.89%), Postives = 537/644 (83.39%), Query Frame = 0
Match: A0A7N2QXH6 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p021482:mrna}))
HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0
Identity = 463/644 (71.89%), Postives = 537/644 (83.39%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQHNGEDQAISNS---QNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSP-RTNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICL TMKPGQGHAIFTAECSHSFHFHCIT+NVKHGNQ+CP+CRAKWKE+PFQSPASDLS RSRI+ WPQD+ WMTV++RLP R DA+R IS + A EP VFDDDE++DHQ E+ K++S N S G I+IKTY EVS+V RSASH NFN+L+ LKAP++ E+ + + QN RAPVDLVTVLD+SGSMAGTKL LLKRAMGFVI+NLGPSDRLSVIAFSSTARRLFPLR+MTD GRQ+ALQAVN+LISN GTNIAEGL+KGAKV+ DRK K+PV SIILLSDGQDTYT+ P ++++T YQSLLP S RR +G G IPVH+FGFGADHDA SMHSISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQELQV V CV+P+L L+SIKAG+Y+++ +D R GFI+VGD+YAEEER+FLV ++IPV + DMTL+ + YKDP+TKE++++EE R V IQRPE G+L VSMEVDRQRNRL AAEAMAEAR +AERGDL AVS LE C + LSET SA+AGDRLCVAL AELKEMQERMANR+VYE+SGRAYVLSGLSSHSWQRATARGDS DST+L+ AYQTPSMVDMVTRSQTM FG+P+PQ RPA+SF + +PR
Sbjct: 75 CAICLATMKPGQGHAIFTAECSHSFHFHCITSNVKHGNQVCPICRAKWKEIPFQSPASDLSHGRSRINPVGWPQDDAWMTVLRRLPSPRLDASRQISSIFHAPEPVVFDDDEVLDHQPEIAEKTTSANEAFDKNSTGTIDIKTYTEVSAVPRSASHDNFNVLIQLKAPVTIERQDSNRNLTESPPVPQNSRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIENLGPSDRLSVIAFSSTARRLFPLRQMTDTGRQQALQAVNSLISNCGTNIAEGLKKGAKVLVDRKWKNPVCSIILLSDGQDTYTVGGPVGSHAQTRYQSLLPISTRRNNGEGLQIPVHAFGFGADHDAASMHSISEISGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELQVRVQCVHPNLELSSIKAGSYRTSTLSDRRIGFIDVGDMYAEEERNFLVTINIPVGCSNDDMTLLKFRCAYKDPVTKEMLTMEEDREVKIQRPEVTGELVVSMEVDRQRNRLHAAEAMAEARVSAERGDLVGAVSALESCHRVLSETPSARAGDRLCVALCAELKEMQERMANRQVYEASGRAYVLSGLSSHSWQRATARGDSTDSTSLVQAYQTPSMVDMVTRSQTMIFGNPAPQRTLRPAQSFPARSRPR 718
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A660KTZ4 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8038825.1}))
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 465/644 (72.20%), Postives = 539/644 (83.70%), Query Frame = 0
Match: A0A660KTZ4 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8038825.1}))
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 465/644 (72.20%), Postives = 539/644 (83.70%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQ---HNGEDQAISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPR-TNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICLTTMK GQGHAIFTAECSHSFHFHCIT+NVKHGNQICP+CRAKWKE+PFQSP SDL RSRI+ WPQD+GWMTV++RLP R D +R S + A EP VFDDDE++D Q E+T +S+S T + +IG I+IKTY EV++V RSASH++F +L+HLKAP + E+ H + S+N RAPVDLVTVLD+SGSMAGTKL LLKRAMGFVI+NLGPSDRLSVIAFSSTARRLFPLRRMTD GRQ+ALQAVN+LISNGGTNIAEGLRKGAKV+ DRK K+PV SIILLSDGQDTYT++SP + +RTDYQSLLP+S+ +G G IPVH+FGFGADHDA SMHSISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQELQV V+CV+PSL L+SIKAG+Y++++ D R GFI+VG LYAEEERDFLV ++IPV +M+L+ V Y Y DPITKE+V+LEE+ V I RPE G+L VS+EVDRQRNRLCAAEAM+EARAAAE GDL AVSVLE CR+ LSET SA+AGDRLC+AL AELKEMQERMANR VYE+SGRAYVLSGLSSHS QRATARGDS+DST+L+ AYQTPSMVDMV RSQTM F +P+PQ RPA+SF T+ +PR
Sbjct: 77 CAICLTTMKTGQGHAIFTAECSHSFHFHCITSNVKHGNQICPICRAKWKEIPFQSPISDLPHGRSRINPVGWPQDDGWMTVLRRLPSPRLDTSRQSSAIFHAPEPVVFDDDEVLDDQPEITERSTSATEATDNNTIGTIDIKTYAEVTAVPRSASHNDFTVLIHLKAPATSERQDSHRNLSELPPVSENTRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIENLGPSDRLSVIAFSSTARRLFPLRRMTDNGRQQALQAVNSLISNGGTNIAEGLRKGAKVLVDRKWKNPVGSIILLSDGQDTYTVSSPAGSRARTDYQSLLPNSICHNNGEGLQIPVHAFGFGADHDAASMHSISEISGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELQVGVECVHPSLQLSSIKAGSYRTSMVEDGRMGFIDVGYLYAEEERDFLVAVNIPVVCSYDEMSLLKVSYVYTDPITKEMVTLEEASEVKIGRPEITGELVVSVEVDRQRNRLCAAEAMSEARAAAESGDLAGAVSVLESCRRVLSETASARAGDRLCLALCAELKEMQERMANRHVYEASGRAYVLSGLSSHSLQRATARGDSVDSTSLVQAYQTPSMVDMVNRSQTMVFANPTPQRSLRPAQSFPTRSRPR 720
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5V1D4 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4282759.1}))
HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0
Identity = 462/643 (71.85%), Postives = 530/643 (82.43%), Query Frame = 0
Match: A0A6J5V1D4 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4282759.1}))
HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0
Identity = 462/643 (71.85%), Postives = 530/643 (82.43%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQHNG--EDQAISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPR-TNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICLTTMK GQGHAIFTAECSHSFHFHCIT+NVKHGNQ+CPVCRAKWKE+PFQSPASDLS SRI+ WPQD+ WMTV++++P R DANR IS L EP +FDDDE +DHQ EV+ KS+S + SIG IE+KT+PEV +V RSASH NF +L+HLKAP++ +HN + QN R PVDLVTVLD+SGSMAGTKL LLKRAMGFV+QNLGPSDRLSVIAFSSTARRLFPLRRMT+ GRQ+ALQAVN+L+SNGGTNIAE LRKG KV+ DRK K+PV SIILLSDGQDTYT+TSP + RTDYQ LLP S+RR +GAG IPVH+FGFGADHDA SMHSISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQEL V ++CV+PSL L SIKAG+Y++++ ADAR G I VGDLYAEEERDFLV ++IPVD S +M+L+ V Y+DPITKE+V+LEE+ V+IQRPE GQL VSMEVDRQRNRL AAEAM+EAR AAE GDL AVSVLE CR+ LSE+ SA+AGDRLC +L AELKEMQERM NRR YE SGRAYVLSGLSSHSWQRATARGDS DST+L+ +YQTPSM+DMVTRSQTM G+PSP+ +SF + QPR
Sbjct: 87 CAICLTTMKTGQGHAIFTAECSHSFHFHCITSNVKHGNQVCPVCRAKWKEIPFQSPASDLSRGISRINPVGWPQDDAWMTVLRQIPPPRIDANRPISSLFHTPEPVIFDDDESLDHQPEVSKKSASVEDSCDNNSIGMIEVKTFPEVPAVQRSASHDNFTVLIHLKAPLTSGRHNSSRNQTLLPVFQNSRVPVDLVTVLDVSGSMAGTKLALLKRAMGFVVQNLGPSDRLSVIAFSSTARRLFPLRRMTETGRQQALQAVNSLVSNGGTNIAEALRKGTKVLVDRKWKNPVCSIILLSDGQDTYTVTSPGGVHPRTDYQLLLPVSIRRNNGAGLQIPVHAFGFGADHDAASMHSISEISGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELLVRIECVHPSLQLGSIKAGSYRTSMMADARMGSISVGDLYAEEERDFLVTINIPVDASSYEMSLVKVSCVYRDPITKEMVNLEEASEVMIQRPEVVGQLIVSMEVDRQRNRLHAAEAMSEARVAAENGDLVGAVSVLESCRRALSESASARAGDRLCASLSAELKEMQERMGNRRAYEESGRAYVLSGLSSHSWQRATARGDSTDSTSLVQSYQTPSMIDMVTRSQTMLLGNPSPRRTLSTTQSFPAKSQPR 729
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5SFG8 ((uncharacterized protein LOC110755419 {ECO:0000313|RefSeq:XP_021812306.1}))
HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0
Identity = 458/643 (71.23%), Postives = 531/643 (82.58%), Query Frame = 0
Match: A0A6P5SFG8 ((uncharacterized protein LOC110755419 {ECO:0000313|RefSeq:XP_021812306.1}))
HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0
Identity = 458/643 (71.23%), Postives = 531/643 (82.58%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQHNG--EDQAISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPRT-NSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICLTTMK GQGHAIFTAECSHSFHFHCIT+NVKHGNQ+CPVCRAKWKE+PFQSPASDLS SRI+ WPQD+ WMTV++++P R DA+R IS L EP +FDDDE +DHQ EV+ KS+S + SIG IE+KTYPEV +V RSAS+ NF +L+HLKAP++ +HN + QN R PVDLVTVLD+SGSMAGTKL LLKRAMGFV+QNLGPSDRLSVIAFSSTARRLFPLRRMT+ GRQ+ALQAVN+L+SNGGTNIAE LRKG KV+ DRK K+PV SIILLSDGQDTYT+TSP + RTDYQ LLP S+RR +G+G IPVH+FGFGADHDA SMHSISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQEL V ++CV+PSL L SIKAG+Y++++ ADAR G I VGD+YAEEERDFLV ++IPVD S +M+L+ V+ Y+DPITKE+V+LEE+ V+IQRPE GQL VSMEVDRQRNRL AAEAM+EAR AAE GDL AVS+LE CR+ LSE+ SA+AGDRLC +L AELKEMQERM NRR YE SGRAYVLSGLSSHSWQRATARGDS DST+L+ +YQTPSM+DMVTRSQTM G+PSP+ +SF + QPR
Sbjct: 87 CAICLTTMKTGQGHAIFTAECSHSFHFHCITSNVKHGNQVCPVCRAKWKEIPFQSPASDLSRGISRINPVGWPQDDAWMTVLRQIPPPRIDASRPISSLFHTPEPVIFDDDESLDHQPEVSKKSASIEDSCDNNSIGTIEVKTYPEVPAVQRSASYDNFTVLIHLKAPLTSGRHNSSRNQTLLPVFQNSRVPVDLVTVLDVSGSMAGTKLALLKRAMGFVVQNLGPSDRLSVIAFSSTARRLFPLRRMTETGRQQALQAVNSLVSNGGTNIAEALRKGTKVLVDRKSKNPVCSIILLSDGQDTYTVTSPGGFHPRTDYQLLLPVSIRRNNGSGLQIPVHAFGFGADHDAASMHSISEMSGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELLVRIECVHPSLQLGSIKAGSYRTSMMADARMGSIYVGDMYAEEERDFLVTINIPVDASSPEMSLVKVRCVYRDPITKEMVNLEEASEVMIQRPEVVGQLIVSMEVDRQRNRLRAAEAMSEARVAAENGDLVGAVSILESCRRALSESASARAGDRLCASLSAELKEMQERMGNRRAYEESGRAYVLSGLSSHSWQRATARGDSTDSTSLVQSYQTPSMIDMVTRSQTMLLGNPSPRRTLSTTQSFPAKSQPR 729
BLAST of XM_017398029.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4F797 ((Full=PREDICTED: Zinc finger {ECO:0000313|EMBL:VVA23797.1}))
HSP 1 Score: 944.495 bits (2440), Expect = 0.000e+0
Identity = 459/643 (71.38%), Postives = 530/643 (82.43%), Query Frame = 0
Match: A0A5E4F797 ((Full=PREDICTED: Zinc finger {ECO:0000313|EMBL:VVA23797.1}))
HSP 1 Score: 944.495 bits (2440), Expect = 0.000e+0
Identity = 459/643 (71.38%), Postives = 530/643 (82.43%), Query Frame = 0
Query: 4 CSICLTTMKPGQGHAIFTAECSHSFHFHCITNNVKHGNQICPVCRAKWKEVPFQSPASDLSGRRSRISRGVWPQDNGWMTVVQRLPHSRPDANRHISPLRQAHEPSVFDDDELMDHQREVTAKSSSDNTYTSDQSIGAIEIKTYPEVSSVARSASHSNFNILLHLKAPISGEQHNG--EDQAISNSQNPRAPVDLVTVLDISGSMAGTKLVLLKRAMGFVIQNLGPSDRLSVIAFSSTARRLFPLRRMTDAGRQEALQAVNALISNGGTNIAEGLRKGAKVMTDRKCKSPVSSIILLSDGQDTYTITSPR-TNSRTDYQSLLPSSMRRGSGAGPHIPVHSFGFGADHDAVSMHSISEASGGTFSFIEAESVIQDAFAQCIGGLLSVVVQELQVVVDCVNPSLCLNSIKAGNYKSTVTADARTGFIEVGDLYAEEERDFLVILDIPVDKYSADMTLINVKYHYKDPITKELVSLEESRNVVIQRPEDAGQLSVSMEVDRQRNRLCAAEAMAEARAAAERGDLTAAVSVLEQCRKQLSETVSAKAGDRLCVALGAELKEMQERMANRRVYESSGRAYVLSGLSSHSWQRATARGDSMDSTTLMHAYQTPSMVDMVTRSQTMYFGSPSPQLPARPARSFSTQPQPR 643
C+ICLTTMK GQGHAIFTAECSHSFHFHCIT+NVKHGNQ+CPVCRAKWKE+PFQSPASDLS SRI+ W QD+ WMTV++++P R DANR IS L EP +FDDDE +DHQ EV+ KS+S + SIG IE+KT+PEV +V RSASH NFN+L+HLKAP++ +HN + QN R PVDLVTVLD+SGSMAGTKL LLKRAMGFV+QNLGPSDRLSVIAFSSTARRLFPLRRMT+ GRQ+ALQAVN+L+SNGGTNIAE LRKG KV+ DRK K+PV SIILLSDGQDTYT+TSP + RTDYQ LLP S+RR +GAG IPVH+FGFGADHDA SMHSISE SGGTFSFIEAE VIQDAFAQCIGGLLSVVVQEL V ++CV+PSL L SIKAG+Y++++ ADAR G I VGDLYAEEERDFLV ++IPV S +M+L+ V+ Y+DPITKE+V++EE+ V+IQRPE G+L VSMEVDRQRNRL AAEAM+EAR AAE GDL AVSVLE CR+ LSE+ SA+AGDRLC +L AELKEMQERM NRR YE SGRAYVLSGLSSHSWQRATARGDS DST+L+ +YQTPSM+DMVTRSQTM G+PSP+ +SF + QPR
Sbjct: 87 CAICLTTMKTGQGHAIFTAECSHSFHFHCITSNVKHGNQVCPVCRAKWKEIPFQSPASDLSRGISRINPVGWAQDDAWMTVLRQIPPPRIDANRPISSLFHTPEPVIFDDDESLDHQPEVSKKSASVEDSCDNNSIGMIEVKTFPEVPAVQRSASHDNFNVLIHLKAPLTSGRHNSSRNQTLLPVFQNSRVPVDLVTVLDVSGSMAGTKLALLKRAMGFVVQNLGPSDRLSVIAFSSTARRLFPLRRMTETGRQQALQAVNSLVSNGGTNIAEALRKGTKVLVDRKWKNPVCSIILLSDGQDTYTVTSPGGVHPRTDYQLLLPVSIRRNNGAGLQIPVHAFGFGADHDAASMHSISEISGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELLVRIECVHPSLQLGSIKAGSYRTSMMADARMGSISVGDLYAEEERDFLVTINIPVVASSYEMSLVKVRCVYRDPITKEMVNVEEASEVMIQRPEVVGELIVSMEVDRQRNRLHAAEAMSEARVAAENGDLVGAVSVLESCRRALSESASARAGDRLCASLSAELKEMQERMGNRRAYEESGRAYVLSGLSSHSWQRATARGDSTDSTSLVQSYQTPSMIDMVTRSQTMLLGNPSPRRTLSTTQSFPAKSQPR 729
| Match Name | Stats | Description |
|---|---|---|
| F6GU18 | E-Value: 0.000e+0, PID: 74.15 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4368... [more] |
| A0A438IKR6 | E-Value: 0.000e+0, PID: 73.84 | (Uncharacterized protein sll0103 {ECO:0000313|EMBL... [more] |
| A5BI34 | E-Value: 0.000e+0, PID: 73.84 | (Uncharacterized protein {ECO:0000313|EMBL:CAN6138... [more] |
| A0A5J5BN18 | E-Value: 0.000e+0, PID: 75.93 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8544... [more] |
| A0A5J5C5Z1 | E-Value: 0.000e+0, PID: 74.92 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8550... [more] |
| A0A7N2QXH6 | E-Value: 0.000e+0, PID: 71.89 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A660KTZ4 | E-Value: 0.000e+0, PID: 72.20 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8038... [more] |
| A0A6J5V1D4 | E-Value: 0.000e+0, PID: 71.85 | (Uncharacterized protein {ECO:0000313|EMBL:CAB4282... [more] |
| A0A6P5SFG8 | E-Value: 0.000e+0, PID: 71.23 | (uncharacterized protein LOC110755419 {ECO:0000313... [more] |
| A0A5E4F797 | E-Value: 0.000e+0, PID: 71.38 | (Full=PREDICTED: Zinc finger {ECO:0000313|EMBL:VVA... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |