Resource Type:
Polypeptide
Name:
XM_017393982.1
Identifier:
XM_017393982.1-protein
Sequence:
MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGES
ETGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLF
VDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAY
VAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPS
LSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGA
AYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSK
VNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFY
CLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYL
QSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDE
ETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALC
TEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGE
ELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHS
KQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTA
NLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSPVNSLQKPEEP
DFSVDEE
Sequence Length:
707
Sequence Checksum:
43ecc935e891fa883b173f1e99b61aef
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017393982.1, derives from mRNA, XM_017393982.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EZM9 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1178.31 bits (3047), Expect = 0.000e+0
Identity = 567/711 (79.75%), Postives = 625/711 (87.90%), Query Frame = 0
Match: A0A4S4EZM9 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1178.31 bits (3047), Expect = 0.000e+0
Identity = 567/711 (79.75%), Postives = 625/711 (87.90%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESET---GRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVN--VHPGSSPVNSLQKPEEPDFSVDE 706
MAYGNSRSVRFQDD LP +N D+V+KVKYKIDG+Q ++SSS+ E ET GRSLK KVL RVFSEDYERVK+KILDPRGP I+RWNKIFL+ACLVSLFVDPLFFYLP V+D++CIDIG TLEV+LTI+RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI++SKIA +YL K FWID IAA+P+PQ+LIWI+IPSL GSTMANTKNVLRF + QYLPRLF+IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHVLGACWYLL++ER E+CW+ VC++D C+ D+FDC KV D R W SSN+T +C N DSY+FGIYGDA S VT++ FFNKYFYCLWWGLKNLSSLGQ L+T+TYVGEISFAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWM HRQLP ELRQSVRKYDQYKWVAT GVDEETLL+GLP+DLRRDIKRHLC DLVRRVPLFDQMDE+MLDAICERLKPALCT+GT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSV PSSTRTVKA+SEVEAFAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRRYKKRK AELKAKE P ++ L D +VP PGSGFA+YAA+L ASTR G N SS V+SLQKP EPDFSV+E
Sbjct: 1 MAYGNSRSVRFQDDLELEKLPTINRDSVVKVKYKIDGTQISESSSRNSEKETEMTGRSLKAKVLSRVFSEDYERVKRKILDPRGPTIQRWNKIFLVACLVSLFVDPLFFYLPEVRDDICIDIGYTLEVVLTIIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDTSKIAARYLRKSFWIDAIAAVPVPQLLIWIIIPSLGGSTMANTKNVLRFFLFLQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQESCWKKVCHVDNQSCQSDFFDCHKVEDPNRKAWLLSSNVTNLCDPNNDSYSFGIYGDATISHVTSTKFFNKYFYCLWWGLKNLSSLGQNLSTSTYVGEISFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMRHRQLPPELRQSVRKYDQYKWVATHGVDEETLLKGLPMDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTQGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVTFPSSTRTVKALSEVEAFALLAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKSVAELKAKECPVVGESELLIGQLDMDVPPPGSGFAVYAARLAASTRRGGNKVSGSDSSVVSSLQKPAEPDFSVEE 711
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TZ15 ((protein CNGC15b isoform X2 {ECO:0000313|RefSeq:XP_011089272.1}))
HSP 1 Score: 1174.84 bits (3038), Expect = 0.000e+0
Identity = 565/713 (79.24%), Postives = 620/713 (86.96%), Query Frame = 0
Match: A0A6I9TZ15 ((protein CNGC15b isoform X2 {ECO:0000313|RefSeq:XP_011089272.1}))
HSP 1 Score: 1174.84 bits (3038), Expect = 0.000e+0
Identity = 565/713 (79.24%), Postives = 620/713 (86.96%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGE---SETGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVH--PGSSPVNSLQKPEEPDF-SVDEE 707
MAY NSRSVRF DD F+ LPI NG+NVIKVKYKIDG++ +SSSK+GE + +SLK KVL RVFSEDYERVKKKILDPRGP +RRWNKIFLIACLVSLFVDPLFFYLP VK ++CIDIG TLEVILTIVRS+ D+FYMIQI++RFRTAYVAPSSRVFGRGELVI+SSKIA +Y + FWID IAALPLPQVLIW VIP+L GSTM NTKNVLRFIIIFQY+PRLF+IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASH+LGA WYLLA+ER EACWR CN++ C++ YFDC +V DS R WF+SSNIT C Y FGIYGDA+ ++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKW ATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCL+REGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFAL AEDLKFVA+QFRRLHSKQLRHKFRF+SHQWR WAACFVQAAWRRYKKRK AEL+A E+ + ++K P+PGSGF++YAA+L AS R + H GS V SLQKP EPDF SVD++
Sbjct: 1 MAYTNSRSVRFHDDVEFSKLPIANGENVIKVKYKIDGTRVAESSSKKGEKSGNSGSKSLKAKVLSRVFSEDYERVKKKILDPRGPTVRRWNKIFLIACLVSLFVDPLFFYLPVVKKDICIDIGFTLEVILTIVRSVADIFYMIQIYIRFRTAYVAPSSRVFGRGELVIDSSKIASRYFRRYFWIDAIAALPLPQVLIWAVIPNLRGSTMMNTKNVLRFIIIFQYIPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGASWYLLAIERQEACWRHSCNLESPSCQYKYFDCRRVADSARNAWFRSSNITNRCNPENSLYPFGIYGDAVMAEVTTAKFFNKYFYCLWWGLKNLSSLGQNLGTSTYVGEIMFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWAATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLMREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALRAEDLKFVAAQFRRLHSKQLRHKFRFYSHQWRAWAACFVQAAWRRYKKRKSAAELRALESLVMETETSNGAGAEKESPAPGSGFSVYAARLAASRRGVHHKHSDSGSGTVGSLQKPAEPDFSSVDDD 713
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PQ37 ((Protein CNGC15c like {ECO:0000313|EMBL:PSR95201.1}))
HSP 1 Score: 1171.38 bits (3029), Expect = 0.000e+0
Identity = 558/710 (78.59%), Postives = 618/710 (87.04%), Query Frame = 0
Match: A0A2R6PQ37 ((Protein CNGC15c like {ECO:0000313|EMBL:PSR95201.1}))
HSP 1 Score: 1171.38 bits (3029), Expect = 0.000e+0
Identity = 558/710 (78.59%), Postives = 618/710 (87.04%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESETGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSP---VNSLQKPEEPDFSVDEE 707
MAY NSRSVRF DD A LP +NGD V+KVKYK+DG + + S + S TGRSLK KVL RVFSEDYERVKKKILDPRGP+IRRWNKIFL+ACLVSLFVDPLFFYLP V+ ++CI+I TLE++LTI+RSITDVFY IQIFVRFRTAYVAPSSRVFGRGELVI+SSKIA +YL FWID++AALPLPQVLIW++IP+L GSTMANTKNVLRFI+IFQYLPRLF+IFPLS+QIVK+ GVVT TAWAGAAYNLMLYMLASHVLGACWYLL++ER EACWR+ C + C+ +FDC +V DS R+ WF+SSNIT +C N SY FGIY DA+T+++T+S F NKYFYCLWWGLKNLS LGQ L+T+TYVGEISFAII+A +GLVLFALLIGNMQ YLQSTTVRLEEWRIKRTDTEQWMHHRQLP ELRQSVRKYDQYKWVATRGVDEE LL+GLP+DLRRDIKRHLC DLVRRVPLFDQMDE+MLDAICERLKPALCTEGT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFAL AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRR+K+RK AE K++E P A++ L D VP PGSGFA+YA++L AS R G N P S V+SLQKP EPDFSVDEE
Sbjct: 1 MAYTNSRSVRFHDDLELAKLPTINGDGVMKVKYKMDGKEIPGTRSNKAGS-TGRSLKAKVLSRVFSEDYERVKKKILDPRGPVIRRWNKIFLVACLVSLFVDPLFFYLPEVRGDVCINIAITLELVLTIIRSITDVFYAIQIFVRFRTAYVAPSSRVFGRGELVIDSSKIASRYLRTSFWIDVVAALPLPQVLIWVIIPNLRGSTMANTKNVLRFILIFQYLPRLFLIFPLSSQIVKAAGVVTATAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRNACKFENQSCQSGFFDCHRVKDSDRVAWFQSSNITTLCDPNASSYPFGIYSDAMTTNLTSSMFLNKYFYCLWWGLKNLSCLGQNLSTSTYVGEISFAIIVATLGLVLFALLIGNMQRYLQSTTVRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCCIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALRAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKRRKTAAEFKSQEYPTVAESEPLTEQLDVEVPPPGSGFAVYASRLAASIRRGAN-KPSRSDLDVVSSLQKPAEPDFSVDEE 708
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YLG8 ((Cyclic nucleotide-gated channel 16 {ECO:0000313|EMBL:AWN82517.1}) (Cyclic nucleotide-gated channel 17 {ECO:0000313|EMBL:AWN82518.1}) (putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_016453101.1}))
HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0
Identity = 564/711 (79.32%), Postives = 622/711 (87.48%), Query Frame = 0
Match: A0A1S3YLG8 ((Cyclic nucleotide-gated channel 16 {ECO:0000313|EMBL:AWN82517.1}) (Cyclic nucleotide-gated channel 17 {ECO:0000313|EMBL:AWN82518.1}) (putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_016453101.1}))
HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0
Identity = 564/711 (79.32%), Postives = 622/711 (87.48%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 707
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGSQ + ++++ E E TG+SLK KVL RVFSEDYERVKKKILDPRGP IRRWNKIFL+ACLV+LFVDPLFFYLP V+D +CIDIGT LEV+LT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNITK C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACFVQAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLESTKFATINGDNLIKVKYKIDGSQLPELANRKNEKEDIRTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVVLTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHTCSFEERSCDFGYFDCRRVKDPQRNAWFQSSNITKQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKKRKSAAELRALEN-IMNETESVSGQLDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XP13 ((putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_009788225.1}))
HSP 1 Score: 1169.07 bits (3023), Expect = 0.000e+0
Identity = 564/711 (79.32%), Postives = 622/711 (87.48%), Query Frame = 0
Match: A0A1U7XP13 ((putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_009788225.1}))
HSP 1 Score: 1169.07 bits (3023), Expect = 0.000e+0
Identity = 564/711 (79.32%), Postives = 622/711 (87.48%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 707
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGS+ + +S++ E E TG+SLK KVL RVFSEDYERVKKKILDPRGP IRRWNKIFL+ACLV+LFVDPLFFYLP V+D +CIDIGT LEV+LT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNITK C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACFVQAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLDTTKYATINGDNLIKVKYKIDGSRLPELASRKNEKEDITTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVVLTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCWRVKDPQRNAWFQSSNITKQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKKRKSAAELRALEN-IMNETESVSGQMDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U8YL68 ((Cyclic nucleotide-gated channel 14 {ECO:0000313|EMBL:AWN82515.1}))
HSP 1 Score: 1169.07 bits (3023), Expect = 0.000e+0
Identity = 564/711 (79.32%), Postives = 622/711 (87.48%), Query Frame = 0
Match: A0A2U8YL68 ((Cyclic nucleotide-gated channel 14 {ECO:0000313|EMBL:AWN82515.1}))
HSP 1 Score: 1169.07 bits (3023), Expect = 0.000e+0
Identity = 564/711 (79.32%), Postives = 622/711 (87.48%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 707
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGS+ + +S++ E E TG+SLK KVL RVFSEDYERVKKKILDPRGP IRRWNKIFL+ACLV+LFVDPLFFYLP V+D +CIDIGT LEV+LT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNITK C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACFVQAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLDTTKYATINGDNLIKVKYKIDGSRLPELASRKNEKEDITTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVVLTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCWRVKDPQRNAWFQSSNITKQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKKRKSAAELRALEN-IMNETESVSGQMDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061H096 ((Cyclic nucleotide-gated channel 15 {ECO:0000313|EMBL:EOY34399.1}))
HSP 1 Score: 1167.14 bits (3018), Expect = 0.000e+0
Identity = 567/720 (78.75%), Postives = 621/720 (86.25%), Query Frame = 0
Match: A0A061H096 ((Cyclic nucleotide-gated channel 15 {ECO:0000313|EMBL:EOY34399.1}))
HSP 1 Score: 1167.14 bits (3018), Expect = 0.000e+0
Identity = 567/720 (78.75%), Postives = 621/720 (86.25%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE-----TGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKEN------PAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSP--VNSLQKPEEPDFSVDEE 707
M + SRSVRFQDD A LP +NGD +IK+KY I+G+Q ++SS++R E E TGRSLKTKVL RVFSED+ERVKKKILDPRGPIIRRWNKIFL+ACLVSLFVDPLFFYLP V +CIDIG LEVILTIVRS+ D FY+IQIF+RFRTAYVAP SRVFGRGELVI+S KIA +YL K FWIDLIAALPLPQVLIWIVIP+L GST NTKNVLRFIIIFQYLPRLF+IFPLS+QIV +TGVVTETAWAGAAYNLMLYMLASHVLGACWYLL++ER EACWRS C++++S C+++YFDC +V D R WF+SSNIT +C SY FGIY DALT DVT S FFNKYFYCLWWGL+NLSSLGQ L+T+TY GEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWM HRQLP ELRQSVRKYDQYKW+ATRGVDEETLL+GLPLDLRRDIKRHLC DLVRRVP+FDQMDE+MLDAICERLKPALCTEGT LVREGDPVNEMLFIIRG+LDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFAL AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRR+KKR+ AEL+AKEN PA A +A PGSG A+YAA+L AS R GVN+H GS V+SL+KP EPDFSVDEE
Sbjct: 1 MGFDKSRSVRFQDDLELAKLPTINGDGMIKLKYHINGTQISESSTRRPEKELPSSRTGRSLKTKVLSRVFSEDFERVKKKILDPRGPIIRRWNKIFLVACLVSLFVDPLFFYLPVVSKAVCIDIGIPLEVILTIVRSLADAFYIIQIFIRFRTAYVAPPSRVFGRGELVIDSRKIASRYLQKSFWIDLIAALPLPQVLIWIVIPNLKGSTTTNTKNVLRFIIIFQYLPRLFLIFPLSSQIVNATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRSACDLEDSSCQYNYFDCHRVKDPGRDTWFRSSNITSLCSPTSSSYQFGIYSDALTLDVTASPFFNKYFYCLWWGLRNLSSLGQNLDTSTYAGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMRHRQLPPELRQSVRKYDQYKWLATRGVDEETLLKGLPLDLRRDIKRHLCLDLVRRVPVFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALRAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRFKKRREAAELRAKENLMAPAEPAPATSA------------PGSGLAMYAARLAASNRRGVNLHCGSDSGVVSSLRKPAEPDFSVDEE 708
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BQS2 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1166.76 bits (3017), Expect = 0.000e+0
Identity = 567/715 (79.30%), Postives = 628/715 (87.83%), Query Frame = 0
Match: A0A5J5BQS2 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1166.76 bits (3017), Expect = 0.000e+0
Identity = 567/715 (79.30%), Postives = 628/715 (87.83%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESET---GRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCS---KVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVH--PGSSPVNSLQKPEEPDFSVDEE 707
MAYGNSRSVRFQ+D A L +NGD++IKVKYKIDG+Q +SSS++GE ET G+SLK KVL RVFSEDYERVKKKILDPRG I RWNKI L+ACLVSLFVDPLFFYLP V+ N CI IG TLEV+LTI+RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKIA +YL + FWID IAALPLPQ+LIW++IP+L+GSTM NTKNVLRFI+IFQYLPRLF+IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHVLGACWYLL++ER EACWR C+++++ C++ +FDC +V DS R WF+SSN+T +C N SY FGIYGDALT +VT+S FFNKYFYCLWWGLKNLSSLGQ L T+T VGEI FAIIIA +GLVLFA LIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLP EL+QSVRKYDQYKW+ATRGVDEE LL+GLPLDLRRDIKRHLC DLVRRV LFDQMDE+MLDAICERLKPALCT+GT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRP+VILPSSTRTVKAISEVEAFALMAEDL FVASQFRRLHSKQLRHKFR +SHQWRTWAACF+QAAWRR+KKRK AELKA+ENP AA+ + D NVP PGSG A+YAA+L ASTR GVN H SS +SLQKPEEPDFSV++E
Sbjct: 1 MAYGNSRSVRFQNDLELAKLSTINGDSMIKVKYKIDGTQIPESSSRKGEMETDMIGKSLKAKVLSRVFSEDYERVKKKILDPRGQTIHRWNKILLVACLVSLFVDPLFFYLPVVRGNFCIYIGITLEVVLTIIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIALRYLRRGFWIDAIAALPLPQILIWVIIPNLNGSTMMNTKNVLRFILIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRHACSLEKTSCQYSFFDCHGVVEVEDSNRTIWFRSSNVTYLCDPNNSSYPFGIYGDALTYNVTSSKFFNKYFYCLWWGLKNLSSLGQSLATSTNVGEICFAIIIATLGLVLFAQLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPLELKQSVRKYDQYKWLATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRRVQLFDQMDERMLDAICERLKPALCTQGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPNVILPSSTRTVKAISEVEAFALMAEDLTFVASQFRRLHSKQLRHKFRSYSHQWRTWAACFIQAAWRRFKKRKSAAELKARENPTAAEDELAQEQMDINVPPPGSGRAMYAARLAASTR-GVNKHSVSDSSIASSLQKPEEPDFSVEQE 714
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6I7R1 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:OIS96583.1}))
HSP 1 Score: 1165.98 bits (3015), Expect = 0.000e+0
Identity = 562/711 (79.04%), Postives = 621/711 (87.34%), Query Frame = 0
Match: A0A1J6I7R1 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:OIS96583.1}))
HSP 1 Score: 1165.98 bits (3015), Expect = 0.000e+0
Identity = 562/711 (79.04%), Postives = 621/711 (87.34%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 707
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGS+ + ++++ E E TG+SLK KVL RVFSEDYERVKKKILDPRGP IRRWNKIFL+ACLV+LFVDPLFFYLP V+D +CIDIGT LEVILT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNIT C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLESTKYATINGDNLIKVKYKIDGSRLPELANRKNEKEDIRTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVILTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCRRVKDPQRNAWFQSSNITNQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKSAAELRALEN-IMNETESVSGQLDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of XM_017393982.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A2A1 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:MPA49968.1}))
HSP 1 Score: 1164.44 bits (3011), Expect = 0.000e+0
Identity = 565/710 (79.58%), Postives = 615/710 (86.62%), Query Frame = 0
Match: A0A5B7A2A1 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:MPA49968.1}))
HSP 1 Score: 1164.44 bits (3011), Expect = 0.000e+0
Identity = 565/710 (79.58%), Postives = 615/710 (86.62%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESETGRSLKTKVLLRVFSEDYERVKKKILDPRGPIIRRWNKIFLIACLVSLFVDPLFFYLPGVKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHS-DKNVPSPGSGFALYAAQLTASTRMGVNVHPG--SSPVNSLQKPEEPDFSVDEE 707
MAYGNSRSVRFQDD A P NGD+VIKVKYKID +TGRSLK KVL RVFSEDYERVKKKILDPRGP IRRWNKIFL+ACLVSLFVDPLFFYLP V+D++CIDIG TLEV+LTI+RSI DVFY+IQIFVRFRTAYVAPSSRVFGRGELVI+SSKIA +YL K FWID+IAALPLPQVLIW++IP+L GS M NTKNVLRFI+IFQYLPRLF+IFPLS++I +TGVVTETAWAGAAYNL+LYMLASHVLGACWYLL++ER E CWR C++D C++ +FDC +V + RI WF+SSN+T +C N SY FGIYGDALTS V +S FFNKYFYCLWWGLKNLSSLGQ L+T+TYVGEISFAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLP ELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLC DLVRRVPLFDQMDE+MLDAICERLKPALCT+GT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSV LPSSTRTVKAISEVEAFAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAW RYKKRK AELKA+E P AA+ L D +VP+ GSG ++YA ASTR GVN H SS V+SLQKP EPDF VDEE
Sbjct: 1 MAYGNSRSVRFQDDLELAKFPTTNGDSVIKVKYKID--------------KTGRSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVSLFVDPLFFYLPVVRDDVCIDIGITLEVVLTIIRSIADVFYIIQIFVRFRTAYVAPSSRVFGRGELVIDSSKIALRYLRKGFWIDVIAALPLPQVLIWVIIPNLKGSMMMNTKNVLRFILIFQYLPRLFLIFPLSSEIANATGVVTETAWAGAAYNLILYMLASHVLGACWYLLSIERQEECWRHTCDLDNPSCQYSFFDCHRVKEPNRITWFQSSNVTNLCDPNDSSYPFGIYGDALTSSVVSSMFFNKYFYCLWWGLKNLSSLGQNLSTSTYVGEISFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTQGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVTLPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWCRYKKRKSAAELKARETPMAAEYEMLSHEQMDIDVPTTGSGLSVYA----ASTRRGVNKHTASDSSVVSSLQKPAEPDFFVDEE 692
| Match Name | Stats | Description |
|---|---|---|
| A0A4S4EZM9 | E-Value: 0.000e+0, PID: 79.75 | Cyclic nucleotide-binding domain-containing protei... [more] |
| A0A6I9TZ15 | E-Value: 0.000e+0, PID: 79.24 | (protein CNGC15b isoform X2 {ECO:0000313|RefSeq:XP... [more] |
| A0A2R6PQ37 | E-Value: 0.000e+0, PID: 78.59 | (Protein CNGC15c like {ECO:0000313|EMBL:PSR95201.1... [more] |
| A0A1S3YLG8 | E-Value: 0.000e+0, PID: 79.32 | (Cyclic nucleotide-gated channel 16 {ECO:0000313|E... [more] |
| A0A1U7XP13 | E-Value: 0.000e+0, PID: 79.32 | (putative cyclic nucleotide-gated ion channel 15 {... [more] |
| A0A2U8YL68 | E-Value: 0.000e+0, PID: 79.32 | (Cyclic nucleotide-gated channel 14 {ECO:0000313|E... [more] |
| A0A061H096 | E-Value: 0.000e+0, PID: 78.75 | (Cyclic nucleotide-gated channel 15 {ECO:0000313|E... [more] |
| A0A5J5BQS2 | E-Value: 0.000e+0, PID: 79.30 | Cyclic nucleotide-binding domain-containing protei... [more] |
| A0A1J6I7R1 | E-Value: 0.000e+0, PID: 79.04 | (Putative cyclic nucleotide-gated ion channel 15 {... [more] |
| A0A5B7A2A1 | E-Value: 0.000e+0, PID: 79.58 | (Putative cyclic nucleotide-gated ion channel 15 {... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |