Resource Type:
Polypeptide
Name:
XM_017398610.1
Identifier:
XM_017398610.1-protein
Sequence:
MEKGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLIT
RENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRI
KITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTK
SSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTA
SQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEF
EQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTP
LRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWR
DRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSG
TTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQ
QSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQ
RIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLE
HPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLH
PGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYG
GIVRGVHLGSSALDILPILDEDDEN
Sequence Length:
675
Sequence Checksum:
7adfceea059f5e678badff5843eeb160
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017398610.1, derives from mRNA, XM_017398610.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BZM2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA73441.1}))
HSP 1 Score: 1004.2 bits (2595), Expect = 0.000e+0
Identity = 511/671 (76.15%), Postives = 579/671 (86.29%), Query Frame = 0
Match: A0A5B7BZM2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA73441.1}))
HSP 1 Score: 1004.2 bits (2595), Expect = 0.000e+0
Identity = 511/671 (76.15%), Postives = 579/671 (86.29%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQS-LFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
KF+VY+NPALSAAL + SLRPSK FL ILSLSTASAF+LL++I+RE+GIID LKL + S+ V YL KAIQ ++GLIL+G M+AL KA+SLWR + GVTV SPSKG EQ LTNRQLGLLGIRP+ EQV SE SKK K+K ++V PS L+PLHQP+ SSSR SR SS+KSN+SGGSK HSFSTP+KS S S L+L+ +Q SV SPG DQLVA+PWSNK+ASSTKEITTEE+ EQFLAD+ EKISESA KLATPPPT SGFG+ATPNTISSS NTSGT RSTPLRPVRMSPGSQKFSTPPKKGEGDLPP MSMEESI+A+EHLGIYPQIE+WRD LRQWFSSVLLNP+L+KIE SHI+VMQAAAKL IS+TI+Q+GTDLP++GT+ SPI+RT++WQPA ++DE+GLLHQLR L DA M KLP GN QQSPQQNS IP++QECI+AI EHQRLHALM+GEWVKGLLP SSVRADY VQRI+ELAEG+C+KNYEYLGSGEVYDKVNKK TLELPTDSHLLLYLFCAFLEHP WMLHVD T YAGAQSSKNPLFLG+LPPKERFPEKYLAV+SGVPSVLHPGA +LAVGKQSPPIFALYWDKK QFSLQGR+A+WDS+LLLCHRI I YGG+VRG+HLGSSAL ILP+LD + E
Sbjct: 19 KFSVYQNPALSAALTSNSLRPSKSTFLCILSLSTASAFALLSIISRESGIIDTLKLRYVSKEVTYLLAKAIQTMMGLILIGTMLALFKAISLWRARNAAGVTVISPSKGTKEQTCLTNRQLGLLGIRPKVEQVVSEPSKKPPKSKFNSVSPSDFLVPLHQPITSSSRSSRLSSNKSNTSGGSKIHSFSTPSKSPGSSSPLYLV------SQLPSVQTSPGLDQLVATPWSNKQASSTKEITTEEKLEQFLADVAEKISESAVKLATPPPTISGFGIATPNTISSSANTSGTRRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPHMSMEESIEAFEHLGIYPQIEQWRDHLRQWFSSVLLNPVLNKIEASHIQVMQAAAKLGISITINQMGTDLPTTGTSATVSPIERTSEWQPAFTLDEDGLLHQLRVTL----DAFMSKLPAGNLQQSPQQNSLIPLIQECINAIAEHQRLHALMKGEWVKGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKVNKKRTLELPTDSHLLLYLFCAFLEHPKWMLHVDSTSYAGAQSSKNPLFLGVLPPKERFPEKYLAVISGVPSVLHPGACILAVGKQSPPIFALYWDKKPQFSLQGRTALWDSILLLCHRINIGYGGVVRGMHLGSSALGILPVLDTETEE 679
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BLL7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544015.1}))
HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0
Identity = 496/673 (73.70%), Postives = 570/673 (84.70%), Query Frame = 0
Match: A0A5J5BLL7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544015.1}))
HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0
Identity = 496/673 (73.70%), Postives = 570/673 (84.70%), Query Frame = 0
Query: 3 KGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
K KF+VY+NPALS+AL + SLRPSK F+ ILSL TASAF+LL +I+RE GIID KL + S+ V YL KAIQ ++GL+L+G M+AL KA+SLWR + GVTV SPSKG EQ LTNRQLGLLGIRP+ V SE S K K+K +++ PS L+PLHQ + SS+R SR S++KSN+SG S HSFSTP+KS S S + VP Q SV SPG DQLVA+PWS KRASSTKEITTEE+ EQFLAD+ EKISESA KLATPPPT GFG+ATPNTI+SS NTSGTTRSTPLR VRMSPGSQKFSTPPKKGEGDLPPPMSMEESI+A+EHLGIYPQIE+WRD LRQWFSSVLLNPL++KIE SH++VM+AAAKL IS+ ++QVG+ LP++G + SPI+RT++WQPA ++DE+GLLHQLR LVQALDASMPKL +GN QQSPQQNS IPI+QECIDAITEHQRLHALM+GEWVKGLLP SSVRADY VQR++ELAEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYL CAFLEHP WMLHVD T YAGAQSSKNPLFLG+LPPKERFPEKYLAV+SGVPSVLHPGA +LAVG+QSPPIFA YWDKK QFSLQGRSA+WDS+LLL HRIK YGG+VRGVHLGSS+L ILP+LD + E+
Sbjct: 16 KPAKFSVYQNPALSSALTSNSLRPSKSTFICILSLFTASAFALLNIISREGGIIDTSKLRYVSKEVTYLIAKAIQTMVGLVLIGTMLALIKAISLWRTRNAAGVTVLSPSKGTKEQTRLTNRQLGLLGIRPK---VVSEPSMKPPKSKFNSLSPSDVLVPLHQAITSSNRSSRLSNNKSNTSGRSTMHSFSTPSKSPGSSSPLYL-VPAISPQLPSVQTSPGLDQLVATPWSIKRASSTKEITTEEKLEQFLADVAEKISESAVKLATPPPTIKGFGIATPNTITSSANTSGTTRSTPLRAVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIEAFEHLGIYPQIEQWRDHLRQWFSSVLLNPLVNKIETSHMQVMKAAAKLGISIKVNQVGSGLPTTGASATVSPIERTSEWQPAFTLDEDGLLHQLRTTLVQALDASMPKLLVGNLQQSPQQNSFIPIIQECIDAITEHQRLHALMKGEWVKGLLPQSSVRADYTVQRVQELAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLLCAFLEHPKWMLHVDSTSYAGAQSSKNPLFLGVLPPKERFPEKYLAVISGVPSVLHPGACILAVGRQSPPIFASYWDKKPQFSLQGRSALWDSILLLLHRIKTGYGGVVRGVHLGSSSLAILPVLDPETED 684
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2KNB9 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p023227:mrna}))
HSP 1 Score: 973.77 bits (2516), Expect = 0.000e+0
Identity = 472/670 (70.45%), Postives = 559/670 (83.43%), Query Frame = 0
Match: A0A7N2KNB9 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p023227:mrna}))
HSP 1 Score: 973.77 bits (2516), Expect = 0.000e+0
Identity = 472/670 (70.45%), Postives = 559/670 (83.43%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
KF+VY+N ALSAAL SL P KY L I LS+ASAF+LLT+++RENG ID LK Q AYLF KAIQ ++GL+ G + AL KA+SL R + V V S +KG +Q L+NRQL LLGI+P+ +QVAS+SSKK K++S P S L+PLHQP+ S +R SR S+D+SNSSGG++ + STP+KS +S S + VP + +Q SV NSPG D +V+SPWSNKR SS KEIT+EE+ EQFLA++DEKI+ESA +LATPPPT SGFG+A+PNT++SS NTSGTTRSTPLR VRMSPGSQKFSTPPKKGEGDLP PMSMEESI+A+EHLGIYPQIE+WRD +RQWFSSVLLNPLL KIE SHI+VMQAAA+L IS+TISQVG+DLP++GT T SPI R+ +WQPA ++DE+G+LHQLRA LVQA+D+S KLP+ N QQSPQQN IPI+QEC+DAITEHQRLHAL++GEWVKGLLP SSVRADY VQRI+ELAEG+C+KNYEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT Y GAQS KNPLFLG+LPPKERFP+KY+AVVSGVPS HPGAS+L +G+QSPPIFALYWDKK QFSLQGR+A+WDS+LLLCHRIK+ YGGIVRG+HLGSSAL ILP+L + E+
Sbjct: 16 KFSVYQNAALSAALTAKSLEPPKYTLLCIFCLSSASAFALLTVLSRENGFIDDLKFISLPQETAYLFAKAIQTIVGLVFFGTIFALFKAISLCRERNIAAVPVLSSNKGNKDQTSLSNRQLELLGIKPKVKQVASDSSKKPPKSRSHLTPSSDVLVPLHQPITSPNRSSRTSADRSNSSGGNRIRAVSTPSKSPSSSSSLYL-VPGSVSQLPSVQNSPGVDSVVSSPWSNKRTSSGKEITSEEQLEQFLAEVDEKITESAGQLATPPPTISGFGIASPNTVASSANTSGTTRSTPLRSVRMSPGSQKFSTPPKKGEGDLPAPMSMEESIEAFEHLGIYPQIEQWRDHIRQWFSSVLLNPLLKKIEMSHIQVMQAAARLGISITISQVGSDLPTTGTPTTVSPIDRSKEWQPAFTLDEDGILHQLRATLVQAIDSSTSKLPLANLQQSPQQNPLIPIMQECVDAITEHQRLHALVKGEWVKGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSYVGAQSIKNPLFLGVLPPKERFPDKYVAVVSGVPSFFHPGASILIIGRQSPPIFALYWDKKLQFSLQGRTALWDSILLLCHRIKVGYGGIVRGMHLGSSALSILPVLTLETED 684
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PF21 ((Transmembrane protein {ECO:0000313|EMBL:PSR89985.1}))
HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0
Identity = 478/667 (71.66%), Postives = 562/667 (84.26%), Query Frame = 0
Match: A0A2R6PF21 ((Transmembrane protein {ECO:0000313|EMBL:PSR89985.1}))
HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0
Identity = 478/667 (71.66%), Postives = 562/667 (84.26%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDED 672
KFAVY+NPALSAAL T SLRPS FL ILS+ ASAF+LL++I RENG ID KLGF S VAY FTKAIQ +LG I +G M+AL KA+SLW+ + + G+ SPSKG EQ LTNRQLGLLGIRP++E+ +E KK SKTK P L+PLHQP+ SS+R S+ SS KSN++ GSK HSFSTP++S+ S S + VP +Q S PG DQLV++PWS+KRASS K ITTEEE EQFLAD+ E+I ESA KLATPPPT SGFG+A+PNTI++S N+SGTTRSTPLRPVRMSPGSQKFSTPPKK EGDLPPPMS+EESI+A+E++GIYPQIE+WRDRLRQWFSSVLLNPLL+KI+ SH++VMQ AAKL ISVT+S+VG DLP++GTT SP++R N+WQPA+++DE+ LLHQLRA LVQALD S K +GN +QS QQNS IPI+Q+C+DAITEHQRLHALM+GEW KGLLP SSVR DY VQRI+E AEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP WMLHVD + YAG+QSSKNPLFLG+LPPK+RFPEKY+AV+SGVPSVLHPGA +LAVG+QSPPIF LYWDK+AQFSLQGR+A+WDS+LLLCHRIK+AYGGIVRG+HLGSSAL ILP+LD +
Sbjct: 17 KFAVYQNPALSAALTTNSLRPSASTFLCILSIFAASAFALLSVIARENGFIDSFKLGFISSNVAYYFTKAIQTMLGSIFVGTMLALVKAISLWKARDSAGIGAMSPSKGTKEQTLLTNRQLGLLGIRPKAEKAVTEPLKKPSKTKLGLAPSEDVLVPLHQPVTSSNRSSQLSSGKSNTTSGSKTHSFSTPSRSSGSPSPLYL-VPAAGSQLPSAQTPPGFDQLVSTPWSSKRASSAKGITTEEELEQFLADVGERIFESAGKLATPPPTISGFGIASPNTIATSGNSSGTTRSTPLRPVRMSPGSQKFSTPPKKREGDLPPPMSVEESIRAFENVGIYPQIEQWRDRLRQWFSSVLLNPLLNKIDTSHMQVMQEAAKLGISVTVSKVGNDLPTTGTTATVSPVQRPNEWQPAITLDEDSLLHQLRATLVQALDTSTAKFSLGNMKQSSQQNSMIPIMQDCLDAITEHQRLHALMKGEWSKGLLPQSSVREDYTVQRIREFAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDSSSYAGSQSSKNPLFLGVLPPKDRFPEKYVAVISGVPSVLHPGACILAVGRQSPPIFTLYWDKRAQFSLQGRTALWDSILLLCHRIKVAYGGIVRGMHLGSSALGILPVLDPE 682
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U7H4 ((transmembrane protein 209-like {ECO:0000313|RefSeq:XP_027086543.1}))
HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0
Identity = 463/670 (69.10%), Postives = 557/670 (83.13%), Query Frame = 0
Match: A0A6P6U7H4 ((transmembrane protein 209-like {ECO:0000313|RefSeq:XP_027086543.1}))
HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0
Identity = 463/670 (69.10%), Postives = 557/670 (83.13%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
KF VY+NPALSAAL + S RPS FLVIL+LS+ASA +L T RE G+ D L+L Q V+ +F K IQ + L+L G ++A KA+S+W+++ VT+ S SKG +EQ+HLT RQLGL+G++P+ E +SSKK K+K+++ PS L+PLHQP+ + SR DKS+ S G+K H+FS+ +KS +S SL+L VPT +QS V NSPG D+L+A+PWSNKRA+S KEITTE+E E+FLAD+DEKISESASKLATPP T +GF A+P I SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGE DLPPPMS+EESI+A+EHLGIYP+IE+WRDRLRQWFSSVLLNPLL+KI++SH++VMQAAAKL +++TI+QVG+D PS GT SP+KRTN+WQPA++VDE+GLL QLR LVQALDA +PKLP+GN Q+SPQQNS +PILQECIDAITEHQRLH LM+GEW KGLLP SSVRADY VQRI+ELAEG+CVKNYEYLG+GEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP+WMLHVDPT YAG+QSSKNPLFLG+LPPK+RFPEKY+AVVS PS+LHPGA +LAVGKQSPPIF LYWDKK QFSLQGR+A+WDS+LLLC++IK +YG IVRG+HLGSSAL ILP+ + N
Sbjct: 14 KFTVYQNPALSAALTSKSRRPSVSTFLVILALSSASAVALFTATCREKGLADILRLRNVPQDVSSVFVKVIQTITSLLLFGTVVAFIKAISIWKVRDAAEVTILSSSKGKEEQLHLTTRQLGLIGVKPKVEPAVVDSSKKPPKSKNASASPSQTLVPLHQPIPAPGYSSRVRGDKSSMSSGNKMHAFSSSSKSPSSPSLYL--VPTASSQS-PVQNSPGSDKLLANPWSNKRATSHKEITTEQELEKFLADVDEKISESASKLATPPATINGFSRASPTPIVSSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGESDLPPPMSIEESIEAFEHLGIYPEIEQWRDRLRQWFSSVLLNPLLTKIDSSHVRVMQAAAKLGVTITITQVGSDTPSKGTMATLSPVKRTNEWQPAIAVDEDGLLQQLRTTLVQALDACLPKLPLGNIQRSPQQNSLVPILQECIDAITEHQRLHTLMKGEWGKGLLPQSSVRADYTVQRIRELAEGTCVKNYEYLGNGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPSWMLHVDPTSYAGSQSSKNPLFLGVLPPKDRFPEKYIAVVSCFPSILHPGACILAVGKQSPPIFVLYWDKKPQFSLQGRTALWDSILLLCYKIKTSYGDIVRGMHLGSSALRILPVFHAETVN 680
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4EJH2 ((transmembrane protein 209 {ECO:0000313|RefSeq:XP_018819545.1}))
HSP 1 Score: 959.903 bits (2480), Expect = 0.000e+0
Identity = 461/670 (68.81%), Postives = 557/670 (83.13%), Query Frame = 0
Match: A0A2I4EJH2 ((transmembrane protein 209 {ECO:0000313|RefSeq:XP_018819545.1}))
HSP 1 Score: 959.903 bits (2480), Expect = 0.000e+0
Identity = 461/670 (68.81%), Postives = 557/670 (83.13%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
KF+VY+N ALS+AL T SLRPS Y+ L I + S+ASAF+LLT+I+RENG ID LK Q VAYLF KAIQ V+GL+ G + AL KA+SL R + T V V S SKG +Q HLT QLGLLGI+ + EQV SE+SKK K++ P S L+PLHQPM+S +R SR +D+SNSSGG++ S TP+KS +S S + VP +Q SV NSPG D LV++PWSNKRASS KEIT+EE+ E+FLA+I+EKI+ESA KL+TPPPT SGF +A+PNT+SSS NTSGTTRSTPLRPVRMSPGSQKFST PKKGEGDLPPPMS+EESI+A++HLGIYP IE+WRD LRQWFSSVL+NPLL KIE SH++VMQAAA++ IS+TISQVG+DLP++G PI RT DWQPA ++DE+G+LHQLRA LVQA+DAS+ KLP+ N QQ PQQN IP++Q+C+DAITE+Q+LHALM+GE VKGLLP S++ADY+VQRI+ELAEG+C+K+YEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT ++G QS K+PLFLG+LPPKERFPEKY+AV+SGVPSVLHPGAS+L VG+QSPPIFALYWDKK QFSLQGR+A+WDS+LL CHRIK+ +GGIVRG+HLGSSAL ILP+LD + ++
Sbjct: 19 KFSVYQNEALSSALTTKSLRPSNYSLLCIFTFSSASAFALLTVISRENGFIDSLKFKNVPQAVAYLFAKAIQTVVGLVFFGTIFALVKAISLRRARNTADVPVLSSSKGNKDQTHLTKHQLGLLGIKSKVEQVVSETSKKPPKSRPHLTPSSDILVPLHQPMISPNRSSRTITDRSNSSGGNRMRSVGTPSKSPSSSSSLYL-VPGGVSQLSSVQNSPGVDSLVSTPWSNKRASSGKEITSEEKLEKFLAEIEEKITESAGKLSTPPPTISGFRIASPNTVSSSANTSGTTRSTPLRPVRMSPGSQKFSTSPKKGEGDLPPPMSLEESIEAFQHLGIYPHIEQWRDHLRQWFSSVLINPLLKKIETSHLQVMQAAARIGISMTISQVGSDLPTAGIPATMFPIDRTKDWQPAFTLDEDGILHQLRATLVQAIDASLLKLPLANLQQPPQQNPLIPVMQQCVDAITEYQKLHALMKGELVKGLLPQISIQADYIVQRIQELAEGTCLKSYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSHSGVQSIKDPLFLGVLPPKERFPEKYVAVISGVPSVLHPGASVLVVGRQSPPIFALYWDKKLQFSLQGRTALWDSILLFCHRIKVGHGGIVRGIHLGSSALSILPVLDLETDD 687
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4F2M9 ((Uncharacterized protein {ECO:0000313|EMBL:THG23165.1}))
HSP 1 Score: 957.592 bits (2474), Expect = 0.000e+0
Identity = 485/715 (67.83%), Postives = 557/715 (77.90%), Query Frame = 0
Match: A0A4S4F2M9 ((Uncharacterized protein {ECO:0000313|EMBL:THG23165.1}))
HSP 1 Score: 957.592 bits (2474), Expect = 0.000e+0
Identity = 485/715 (67.83%), Postives = 557/715 (77.90%), Query Frame = 0
Query: 3 KGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPI-KRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQ---------------------------------FSL---QGRS--AMWDSMLLLCHR---IKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
K KFAVY+NPALSAA+ T SLRP+K FL ILSLSTASAF+LL+ RENG+ID LKLGF S VAYLF KAIQI+LG +G M A KA+SLWR + G+ V SPSKG EQ LTNRQLGLLGIR S+ +E +K KTK ++ + L+PLHQP+ SS+R S+ S KSN+S GSK HSFSTP+K + S SL + VP +Q S SPG DQLVA+PW NKRAS KEITTEEE EQFLAD+ EKISESA K+ATPPPT SGFG+A+PN I+SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESI+A+E LGI+PQIE WRDR+RQWFSSVLLNPLL+KIE SH++VMQAAAKL IS+TIS+VG+DLP++GT SPI +R NDW+PA +DE+GLLHQLRA LVQALDASMPKLP+GN QQSPQQN+ PI+QECIDAITEHQRLH+LM+GEW KGLLP SSVRAD+ VQRI+ELAEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT AGAQSSKNPLFLG+LPPKERFPEKY+A +SGVP VLHPGA +LA+G+QSPPIFALYWDKK Q FS Q R A D++L C + IK+A GGIVRG++LGSSAL ILP+L + E+
Sbjct: 19 KPSKFAVYQNPALSAAMSTNSLRPTKPTFLCILSLSTASAFALLSFSARENGLIDSLKLGFISPDVAYLFAKAIQIMLGSFFVGTMFAFIKAISLWRARNAAGIAVISPSKGTKEQTLLTNRQLGLLGIR--SKVAVTEPLRKPPKTKFNSASTADVLVPLHQPVTSSNRSSQLSGGKSNTSSGSKTHSFSTPSKPSGSPSLLYL-VPAASSQLPSAQTSPGFDQLVATPWLNKRASFNKEITTEEELEQFLADVGEKISESAGKMATPPPTISGFGMASPNAIASSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIEAFERLGIFPQIELWRDRIRQWFSSVLLNPLLNKIETSHMQVMQAAAKLGISITISKVGSDLPTTGTPATVSPIERRPNDWKPAFDLDEDGLLHQLRATLVQALDASMPKLPLGNLQQSPQQNTMTPIVQECIDAITEHQRLHSLMKGEWAKGLLPQSSVRADFTVQRIRELAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSSAGAQSSKNPLFLGVLPPKERFPEKYVAAISGVPHVLHPGACILAIGRQSPPIFALYWDKKPQTFVCKLLGQSHIDQRGTLQPIISVLAPSTLQEAFSFEEEQNREAPAKVDNILPGCEKPVMIKVASGGIVRGMNLGSSALGILPVLGPETED 730
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A660KU51 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8038885.1}))
HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 473/669 (70.70%), Postives = 553/669 (82.66%), Query Frame = 0
Match: A0A660KU51 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8038885.1}))
HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 473/669 (70.70%), Postives = 553/669 (82.66%), Query Frame = 0
Query: 7 FAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
F+VY+N ALSAAL SL+PSK L S S+ SAF+LLTLI+ EN ID LK Q AYL KA+Q V+GL+ G + +L KA+SL R + TGV+V S KG +Q LTNRQLGLLGI+P+ EQV SESSKK K++ P S L+PLH PM S SR SR S+D+SNSSGGS+ H+ STP+KS +S S + +Q S+ +SPG D +V++PWSNKR SS KEIT+EE+ EQFLA++DEKI+ESA KLATPPPT SGFG+A+PNT++SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEE+ +A+EHLGIYPQIE+WRD LRQWFSSVLLNPLL KIE SHI+VMQAAA+L IS+TISQVG+DLP++GT SPI R+ DWQPA ++DE+G+LH+LRA LVQA+D SMPKLP+ N QQSPQQN IPI+QEC+DAITEHQRLHALM+GEWVKGLLP S VRA+Y VQRI+ELA G+C+KNYEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT Y GAQSSKNPLFLG+LPPKERFPE Y+AV+SGVPS LHPGAS+L VG++SPP FALYWDKKAQFSLQGR+A+WDS+LLLCHRIKI YGGIVRG+HLGSSAL ILP+LD + E+
Sbjct: 20 FSVYQNAALSAALTAKSLQPSKCTLLCAFSFSSVSAFALLTLISWENCFIDNLKFRGLPQETAYLIAKALQTVVGLVFFGTVFSLFKAISLHRARNVTGVSVLSSGKGNKDQTCLTNRQLGLLGIKPKVEQVTSESSKKPPKSR----PHSDVLVPLHPPMTSPSRSSRTSADRSNSSGGSRRHAVSTPSKSPSSLSSLYLVPGAV-SQLPSLQSSPGLDSMVSTPWSNKRPSSGKEITSEEKLEQFLAEVDEKITESAGKLATPPPTISGFGIASPNTVASSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEEATEAFEHLGIYPQIEQWRDHLRQWFSSVLLNPLLKKIETSHIQVMQAAARLGISITISQVGSDLPTTGTPATVSPIDRSKDWQPAFTLDEDGILHRLRATLVQAIDTSMPKLPLANLQQSPQQNPLIPIMQECVDAITEHQRLHALMKGEWVKGLLPQSGVRANYTVQRIRELAGGTCLKNYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSYIGAQSSKNPLFLGVLPPKERFPEHYVAVISGVPSALHPGASILVVGRKSPPSFALYWDKKAQFSLQGRTALWDSILLLCHRIKIGYGGIVRGMHLGSSALSILPVLDSETED 683
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7IYC9 ((Uncharacterized protein {ECO:0000313|EMBL:TXG73884.1}))
HSP 1 Score: 951.814 bits (2459), Expect = 0.000e+0
Identity = 457/674 (67.80%), Postives = 551/674 (81.75%), Query Frame = 0
Match: A0A5C7IYC9 ((Uncharacterized protein {ECO:0000313|EMBL:TXG73884.1}))
HSP 1 Score: 951.814 bits (2459), Expect = 0.000e+0
Identity = 457/674 (67.80%), Postives = 551/674 (81.75%), Query Frame = 0
Query: 3 KGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTAS-QSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
K KF VY+NP LSAAL SL+PSK + ++S+ASAF+LL++I+RENG+ID ++ Q AYL KAIQ ++GL+ G+++AL + +SL + T V+V SP+KG +Q LT QLGLLGI+P+ E ASES+KK K++ L+PLHQ + SS+R SR SDK N+SGG+K +SF + ++S S SL+L+ T+P S V SPG DQ+ ++PWS+KRAS KEI TEE+ EQFLA +DEKI+ESA KLATPPPT SGFG+A+P T++SS NTSG TRSTPLRPVRMSPGSQKF+TPPKKGEGDLPPPMSMEESI+A+EHLGIYPQIE+WRDRLRQWFSSVLLNPLL+KIE SHI+VM AA+KL IS+TIS VG+DL +SG + SPI RT +WQPA ++DE+GLL+QLRA+LVQ+LDAS PK P+ N QQSPQQN IP++QEC+DAITEHQRLHALM+GEWVKGLLP SSVRADY VQRI+ELAEG+C+KNYEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT YAGAQSSKNPL LG+LPPKE FPEKY+AV S +PS HPGAS+L VG+QSPPIFALYWDKK QFSLQGR+A+WDS+LL CHRIKI YGGIVRG+HLGSSAL+ILP++D ++E+
Sbjct: 24 KPSKFTVYQNPLLSAALTANSLQPSKSTLICFFAISSASAFALLSIISRENGLIDKMRFKCIPQEAAYLCAKAIQTIVGLLFTGSVVALLRVISLRKASTTVSVSVVSPAKGTKDQPQLTQHQLGLLGIKPKVENSASESAKKPPKSRPHMASSPDVLVPLHQSITSSNRKSRVGSDKPNTSGGNKMNSFGSASRSQGSPSSLYLVPASTSPMPS--VQTSPGRDQVTSTPWSSKRASHAKEIMTEEQLEQFLAKMDEKITESAGKLATPPPTVSGFGIASPTTVASSANTSGATRSTPLRPVRMSPGSQKFTTPPKKGEGDLPPPMSMEESIEAFEHLGIYPQIEQWRDRLRQWFSSVLLNPLLNKIETSHIQVMNAASKLGISITISPVGSDLQTSGRPASVSPIDRTKEWQPAFALDEDGLLYQLRASLVQSLDASTPKFPLANPQQSPQQNPMIPVMQECVDAITEHQRLHALMKGEWVKGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSYAGAQSSKNPLLLGVLPPKESFPEKYIAVTSSIPSAHHPGASVLVVGRQSPPIFALYWDKKLQFSLQGRTALWDSILLQCHRIKIGYGGIVRGMHLGSSALNILPVIDSENED 695
BLAST of XM_017398610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068UHN9 ((Uncharacterized protein {ECO:0000313|EMBL:CDP07143.1}))
HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0
Identity = 460/670 (68.66%), Postives = 555/670 (82.84%), Query Frame = 0
Match: A0A068UHN9 ((Uncharacterized protein {ECO:0000313|EMBL:CDP07143.1}))
HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0
Identity = 460/670 (68.66%), Postives = 555/670 (82.84%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQGRSAMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 675
KF VY+NPALSAAL + S RPS FLVIL+LS+ASA +L T E G+ D L+L Q V+ +F K IQ + L+L G ++A KA+S+W+++ VT+ S SKG +E +HLT RQLGL+G++P+ E +SSKK K+K+++ PS L+PLHQP+ + SR DKS++S G+K H+FS+ +KS +S SL+L VPT +QS V NSPG D+L+A+PWSNKRA+S KEITTE+E E+FLAD+DEKISESASKLATPPPT +GF A+P TI SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGE DLPPPMS+EESI+A+EHLGIYP+IE+WRDRLRQWFSSVLLNPLL+KI++SH++VMQAAAKL +++TI+QVG+D PS GT SP+KRTN+WQPA++VDE+GLL QLR LVQALDA +PKLP+GN QQSPQQNS +PILQECIDAITEHQRLH LM+GEW KGLLP SSV+ADY VQRI+ELAEG+CVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP+WMLHVDPT YAG+QSSKNPLFLG+LPPK+RFPEKY+AVVS PS+LHPGA +LAVGKQSPPIF LYWDKK QFSLQ + +WDS++LLC++IK +YG IVRG+HLGSSAL ILP+ + N
Sbjct: 14 KFTVYQNPALSAALTSKSRRPSVSTFLVILALSSASAVALFTATCWEKGLADILRLRNVPQDVSSVFVKVIQTITSLVLFGTVVAFIKAISIWKVRDAAEVTILSSSKGKEEHLHLTARQLGLIGVKPKVEPAVVDSSKKPPKSKNASASPSQTLVPLHQPIPAPGYSSRVRGDKSSTSRGNKMHAFSSSSKSPSSPSLYL--VPTASSQS-PVQNSPGSDKLLANPWSNKRATSHKEITTEQELEKFLADVDEKISESASKLATPPPTINGFSRASPTTIVSSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGESDLPPPMSIEESIEAFEHLGIYPEIEQWRDRLRQWFSSVLLNPLLTKIDSSHVRVMQAAAKLGVTITITQVGSDTPSKGTMATLSPVKRTNEWQPAIAVDEDGLLQQLRTTLVQALDACLPKLPLGNIQQSPQQNSLVPILQECIDAITEHQRLHTLMKGEWGKGLLPQSSVQADYTVQRIRELAEGTCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPSWMLHVDPTSYAGSQSSKNPLFLGVLPPKDRFPEKYIAVVSCFPSILHPGACILAVGKQSPPIFVLYWDKKPQFSLQ--ATLWDSIILLCYKIKTSYGDIVRGMHLGSSALRILPVFHPETVN 678
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BZM2 | E-Value: 0.000e+0, PID: 76.15 | (Uncharacterized protein {ECO:0000313|EMBL:MPA7344... [more] |
| A0A5J5BLL7 | E-Value: 0.000e+0, PID: 73.70 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8544... [more] |
| A0A7N2KNB9 | E-Value: 0.000e+0, PID: 70.45 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A2R6PF21 | E-Value: 0.000e+0, PID: 71.66 | (Transmembrane protein {ECO:0000313|EMBL:PSR89985.... [more] |
| A0A6P6U7H4 | E-Value: 0.000e+0, PID: 69.10 | (transmembrane protein 209-like {ECO:0000313|RefSe... [more] |
| A0A2I4EJH2 | E-Value: 0.000e+0, PID: 68.81 | (transmembrane protein 209 {ECO:0000313|RefSeq:XP_... [more] |
| A0A4S4F2M9 | E-Value: 0.000e+0, PID: 67.83 | (Uncharacterized protein {ECO:0000313|EMBL:THG2316... [more] |
| A0A660KU51 | E-Value: 0.000e+0, PID: 70.70 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8038... [more] |
| A0A5C7IYC9 | E-Value: 0.000e+0, PID: 67.80 | (Uncharacterized protein {ECO:0000313|EMBL:TXG7388... [more] |
| A0A068UHN9 | E-Value: 0.000e+0, PID: 68.66 | (Uncharacterized protein {ECO:0000313|EMBL:CDP0714... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |