Resource Type:
Polypeptide
Name:
XM_017397551.1
Identifier:
XM_017397551.1-protein
Sequence:
MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEE
IRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMS
RLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDV
ELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVT
TSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSNLSSSGQATSN
STEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCP
KTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSA
AERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPL
LVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGS
MEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAAT
ALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHS
EGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQE
LGLMDLLVELSQTGTDRGKRKAAQLLERLNRFSDQETQAPAHVEDPTQAL
AQTQS
Sequence Length:
655
Sequence Checksum:
7d4d036826704d2a09013a0bf11fdb3f
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017397551.1, derives from mRNA, XM_017397551.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9GWQ2 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1036.94 bits (2680), Expect = 0.000e+0
Identity = 508/649 (78.27%), Postives = 577/649 (88.91%), Query Frame = 0
Match: A0A2G9GWQ2 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1036.94 bits (2680), Expect = 0.000e+0
Identity = 508/649 (78.27%), Postives = 577/649 (88.91%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSN-LSSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRFSDQETQAPAHVEDPTQ 648
ME++K AL ++LI++V EISAI+E+RSTV+KQY NLARRLKLLTPMFEEIRDSK+ +P DS +AL SL SA+E A ELL FGS GSKIY+VLER+QIM+R QEVT++LE ALSGISFE LDISDE++EQVELV+AQFRRAKGR+DAPDVELY+DL CLYN++ND A +P +L+RLVDKLQL GIADLTQESLALHEMV + GDP ESIEKMSMLLKK+K+FVQT NP IDS+ EKS SS G+A + +K +IP+DFRCPISLELM+DPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQTL++++LTPNYVLRSLIAQWCEANG+EPPKRPGS+R TKT SACS A+RSKIE LL+ L + SPEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLV LLS PDSRTQEHAVTALLNLSICEDNKGSI+S GAV GIV+VLKKGSMEARENAAATLFSLSV+D KVTIGASGAIPPLVTLL EGTQRGKKDAATALFNLCIYQGNKGKAVRA V+PTLM +LTEPQG MVDEALAILAIL+SH EGK +IGAA+AVPVLV+VIGNGSPRNKENAAAV+VHLCSGDQQHLV+AQELG+M L++L+Q GT+RGKRKAAQLLER+NRF + + QA A + TQ
Sbjct: 1 MEDDKA-ALSRKLIDIVGEISAISEYRSTVKKQYTNLARRLKLLTPMFEEIRDSKDPLPDDSIKALASLASALESAKELLRFGSEGSKIYLVLERDQIMTRFQEVTAELEQALSGISFENLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLCLYNENNDAADDPDVLRRLVDKLQLGGIADLTQESLALHEMVAATGGDPEESIEKMSMLLKKVKDFVQTVNPNIDSTAAEKSTPTSSGGKALTEGNQKNLVIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGIEPPKRPGSSRATKTGSACSPADRSKIEALLYKLTSASPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVQLLSTPDSRTQEHAVTALLNLSICEDNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLNEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPQGTMVDEALAILAILASHPEGKASIGAAEAVPVLVDVIGNGSPRNKENAAAVMVHLCSGDQQHLVEAQELGVMGPLLDLAQHGTERGKRKAAQLLERMNRFVETQKQARAQADTQTQ 648
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TUW9 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1031.55 bits (2666), Expect = 0.000e+0
Identity = 508/649 (78.27%), Postives = 573/649 (88.29%), Query Frame = 0
Match: A0A6I9TUW9 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1031.55 bits (2666), Expect = 0.000e+0
Identity = 508/649 (78.27%), Postives = 573/649 (88.29%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSN-LSSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRFSDQETQAPAHVEDPTQ 648
ME++K AL ++LI++V+EISAI E+RSTV+KQY NLARRLKLLTPMFEEIRDSK+ +P DS +AL SL SA+E A ELL FGS GSKIY+VLEREQIMSR QEVT++LE ALS ISFEKLDISDE++EQVELV+AQFRRAKGR+DAPD ELYDDL CLYNK+ND +P +L+RLV+KLQL GIADLTQESLALHEMV + GDP ESIEKMSMLLKK+K+FVQTENP IDS+ EKS SSSG+ ++ +K +IP+DFRCPISLELMKDPVIVSTGQTY+RSCIEKWLEAGH TCPKTQQ L++++LTPNYVLRSLIAQWCEANG+EPPKRPGS+R TKT SACS AER+KIE LL+ L +G+PEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLV LLS PDSRTQEHAVTALLNLSICEDNKGSI+S GAV GIV+VLKKGSMEARENAAATLFSLSVVD KVTIG SGAIPPLVTLL EGTQRGKKDAATALFNLCIYQGNKGKAVRA V+P LM +LTEPQG MVDEALAILAIL+SH EGK AIGAA+AVP+LV+VI NGSPRNKENAAAVLVHLCSGDQQHLV+AQELG+M L++L+Q GT+RGKRKAAQLLER+NRF + + QA A + TQ
Sbjct: 1 MEDDKT-ALSRKLIDIVSEISAIPEYRSTVKKQYTNLARRLKLLTPMFEEIRDSKDPLPEDSIRALASLASALESAKELLRFGSEGSKIYLVLEREQIMSRFQEVTAELEQALSAISFEKLDISDEVKEQVELVLAQFRRAKGRVDAPDGELYDDLLCLYNKNNDGEEDPDVLRRLVEKLQLGGIADLTQESLALHEMVAATGGDPEESIEKMSMLLKKVKDFVQTENPNIDSTAAEKSAPTSSSGKTSAEGNQKNLVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHSTCPKTQQALTSTALTPNYVLRSLIAQWCEANGIEPPKRPGSSRATKTGSACSPAERTKIEALLYKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVQLLSTPDSRTQEHAVTALLNLSICEDNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGGSGAIPPLVTLLNEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPILMRLLTEPQGSMVDEALAILAILASHPEGKAAIGAAEAVPILVDVIRNGSPRNKENAAAVLVHLCSGDQQHLVEAQELGVMGPLLDLAQHGTERGKRKAAQLLERMNRFVETQKQARAQADTQTQ 648
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BM02 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1028.08 bits (2657), Expect = 0.000e+0
Identity = 512/655 (78.17%), Postives = 575/655 (87.79%), Query Frame = 0
Match: A0A5J5BM02 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1028.08 bits (2657), Expect = 0.000e+0
Identity = 512/655 (78.17%), Postives = 575/655 (87.79%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKS-NLSSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRFSDQETQAPAHVEDPTQALAQTQ 654
ME+EKG AL+++LI++V+EISAI+E+R V+KQ+CNLARRLKLLTPMFEEIR+SKE +P +SF+AL SL+ A+E A ELL FGS GSKIY+VLER+QIM + VT+ LE L GIS+EKLDISDE++EQVELV+AQFRRAKGR+DAPDVELY+DL LYNKSND A +PA+L+RL +KLQL GIADLTQESLALHEMV S GDPGESIEKMSMLLKKIK+FVQTENP +DS EKS S SGQA+ + +K P+IP+DFRCPISLELMKDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQTL++++LTPNYVLRSLIAQWCEANG+EPPKRP S+R +K TS CS AER+KIETLL L + SPEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLVGLLS PDSRTQEHAVTALLNLSICEDNKGSI+S GAV GIV VLKKGSMEARENAAATLFSLSVVD KVTIG SGAIPPLVTLL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEP+G MVDEALAILAIL+SH EGK AIGAA+AVPVLVEVIGNGSPRN+ENAAAVLVHLCSGD +HLV+AQELG+M LV+L+Q GTDRGKRKA QLLER+NRF +Q Q A VE QA Q Q
Sbjct: 1 MEDEKG-ALIQKLIDIVSEISAISEYRCAVKKQFCNLARRLKLLTPMFEEIRESKEPLPEESFKALSSLKEALESARELLRFGSEGSKIYLVLERDQIMDKFHGVTAHLEQVLGGISYEKLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLSLYNKSNDLAADPAVLRRLAEKLQLMGIADLTQESLALHEMVFVSGGDPGESIEKMSMLLKKIKDFVQTENPDMDSPPREKSIPASCSGQASMDGNQKSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGIEPPKRP-SSRPSKATSFCSPAERTKIETLLRKLASCSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIISSGAVPGIVQVLKKGSMEARENAAATLFSLSVVDENKVTIGVSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPEGSMVDEALAILAILASHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCSGDPKHLVQAQELGVMGPLVDLAQNGTDRGKRKAGQLLERMNRFVEQ--QKLAQVEAEAQAQTQNQ 651
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZX12 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1028.08 bits (2657), Expect = 0.000e+0
Identity = 506/633 (79.94%), Postives = 574/633 (90.68%), Query Frame = 0
Match: A0A5B6ZX12 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1028.08 bits (2657), Expect = 0.000e+0
Identity = 506/633 (79.94%), Postives = 574/633 (90.68%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSNLSS-SGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRF 632
ME+EKG AL+++LI++V++ISAI+++R TV+KQYCNLARRLKLLTPMFEEIR+SKE +P +SFQAL SL+ A+E A ELL FGS GSKIYMVLER+QIM++ QEVT+ LE L GIS+EKLDISDE++EQVELV+AQFRRAKGR+DAPDVELY+DL LYNK+ND A +PA+LKRL +KLQL GIADLTQESLALHEMV+ S GDPGESIEKMSMLLKKIK+FVQTENP +DS T EKS SS SG+A+++ K P+IP+DFRCPISLEL+KDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQTL++++LTPNYVLRSLIAQWCEANG+EPPKRP S+R +K TS CS AER+KIETLL L + +PEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLVGLLS PDSRTQEHAVTALLNLSICEDNKGSIVS GAV GIV+VLKKGSMEARENAAATLFSLSVVD K+TIGASGAI PLVTLL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEPQG MVDEALAILAILSSH EGK AIGAA+AVPVLV+VI NGSPRN+EN+AAVLVHLC+GDQQHLV+AQELG+M L++L+Q GTDRGKRKAAQLLER+NRF
Sbjct: 1 MEDEKG-ALVQKLIDIVDDISAISDYRCTVKKQYCNLARRLKLLTPMFEEIRESKEPLPEESFQALSSLKEALESARELLRFGSEGSKIYMVLERDQIMNKFQEVTAHLEQLLDGISYEKLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLFLYNKNNDVAADPAVLKRLAEKLQLMGIADLTQESLALHEMVSVSGGDPGESIEKMSMLLKKIKDFVQTENPDMDSPTREKSIPSSCSGEASTDGNHKSPVIPDDFRCPISLELLKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGIEPPKRP-SSRPSKITSVCSPAERTKIETLLRKLASCNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKITIGASGAILPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPQGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVDVIRNGSPRNRENSAAVLVHLCAGDQQHLVEAQELGVMGPLLDLAQNGTDRGKRKAAQLLERMNRF 631
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZWQ6 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1027.7 bits (2656), Expect = 0.000e+0
Identity = 506/633 (79.94%), Postives = 573/633 (90.52%), Query Frame = 0
Match: A0A5B6ZWQ6 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1027.7 bits (2656), Expect = 0.000e+0
Identity = 506/633 (79.94%), Postives = 573/633 (90.52%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSNLSS-SGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRF 632
ME++KG AL+++LI++VNEISAI+++R TV+K YCNLARRLKLLTPMFEEIR+SKE +P +SFQAL SL+ A+E A ELL FGS GSKIYMVLER+QIM++ QEVT+ LE L GIS+EKLDISDE++EQVELV+AQFRRAKGR+DAPDVELY+DL LYNK+ND A +PA+LKRL +KLQL GIADLTQESLALHEMV+ S GDPGESIEKMSMLLKKIK+FVQTENP +DS T EKS SS SG+A+++ K P+IP+DFRCPISLEL+KDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQTL++++LTPNYVLRSLIAQWCEANG+EPPKRP S+R +K TS CS AER+KIETLL L + +PEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLVGLLS PDSRTQEHAVTALLNLSICEDNKGSIVS GAV GIV+VLKKGSMEARENAAATLFSLSVVD K+TIGASGAI PLVTLL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEPQG MVDEALAILAILSSH EGK AIGAA+AVPVLV+VI NGSPRN+EN+AAVLVHLC+GDQQHLV+AQELG+M L++L+Q GTDRGKRKAAQLLER+NRF
Sbjct: 1 MEDDKG-ALVQKLIDVVNEISAISDYRCTVKKHYCNLARRLKLLTPMFEEIRESKEPLPEESFQALSSLKEALESARELLRFGSEGSKIYMVLERDQIMNKFQEVTAHLEQLLDGISYEKLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLFLYNKNNDVAADPAVLKRLAEKLQLMGIADLTQESLALHEMVSVSGGDPGESIEKMSMLLKKIKDFVQTENPDMDSPTREKSIPSSCSGEASTDGNHKSPVIPDDFRCPISLELLKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGIEPPKRP-SSRPSKITSVCSPAERTKIETLLRKLASCNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKITIGASGAILPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPQGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVDVIRNGSPRNRENSAAVLVHLCAGDQQHLVEAQELGVMGPLLDLAQNGTDRGKRKAAQLLERMNRF 631
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5EJ87 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 502/633 (79.30%), Postives = 568/633 (89.73%), Query Frame = 0
Match: A0A2P5EJ87 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 502/633 (79.30%), Postives = 568/633 (89.73%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKS-NLSSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRF 632
MEEEK AL++ LI+ V+EI++I+E++ TV+K YCNL+RRLKLLTPMFEEIRDSKE +PRD+ +ALVS A++ A +LL FGS GSKIY+VLEREQ+MS+ +VT++LE ALSGIS+EKLDISDE++EQVELV+AQFRRAKGR+D PDVEL++DLSCLYN SND +PAILKRLV+KLQL GI +LTQESLALHEMVT S GDPG SIEKMSMLLKKIK+FVQTENP +D+ E S S SGQA+++ K P+IP+DFRCPISLELMKDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQ+LSN++LTPNYVLRSLIAQWCEANG+EPPKRP S+R +KTTSACSAAER+KIE LLH L +G+PEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLV LLS PDSRTQEHAVTALLNLSICEDNKGSIVS GAV GIV+VLKKGSMEARENAAATLFSLSVVD K+TIGA GAIPPLV LL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEP G MVDEALAILAIL+SH EGK AIGAA+AVPVLVEVIG+GSPRNKENAAAVLVHLC+GDQQHLV+AQELG+M LV+L+Q GTDRGKRKAAQLLER++RF
Sbjct: 1 MEEEKS-ALVQSLIDAVSEIASISEYKCTVKKHYCNLSRRLKLLTPMFEEIRDSKEALPRDTTKALVSFMEALKSAKDLLRFGSEGSKIYLVLEREQVMSKFHDVTAKLEQALSGISYEKLDISDEVKEQVELVLAQFRRAKGRVDTPDVELFEDLSCLYN-SNDAPADPAILKRLVEKLQLVGIDELTQESLALHEMVTASGGDPGASIEKMSMLLKKIKDFVQTENPNMDAPARENSVPASCSGQASTDKNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQSLSNTALTPNYVLRSLIAQWCEANGLEPPKRPSSSRPSKTTSACSAAERTKIENLLHKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVTLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDGNKITIGALGAIPPLVMLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHPEGKAAIGAAEAVPVLVEVIGSGSPRNKENAAAVLVHLCAGDQQHLVEAQELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRF 631
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067LAL3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 501/651 (76.96%), Postives = 577/651 (88.63%), Query Frame = 0
Match: A0A067LAL3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 501/651 (76.96%), Postives = 577/651 (88.63%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSNL--SSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRFSDQETQAPAHVEDPTQA 649
ME+EKG A+++ LI+ V++I++I+++R TV+KQYCNLARRLKLLTPMFEEIR+SKE +P +S +ALV L+ A++LA ELL FGS GSKIY+VLEREQIM++ +VT+QLE ALSGIS+E LDISDE++EQVELV+AQFRRAKGR+DAPDVELY+DL LYN+S D A +PA+LKR +KLQL GIADLTQESLALHEMV + GDP E+IEKMSMLLKKIK+FVQTENP +D+ + EK NL S SGQA+ N K P+IP+DFRCPISLELMKDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQTL++++LTPNYVLRSLIAQWCEANG+EPPKRP S+R KTTSA S AER+KIE LLH L +GSPEDQR+AA +IRLLAKRN DNRVAIAEAGAIPLLV LLS PDSRTQEHAVTALLNLSICEDNKGSI+S GAV GIV+VLKKGSMEARENAAATLFSLSVVD KVTIG+SGAIPPLVTLL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEP G MVDEALAILAIL+SH EGK AIGAA+AVPVLVEVIGNGSPRN+ENAAAVLVHLCSGDQ+HL +AQELG+M L++L+Q GTDRGKRKA QLLER++R+ +Q+ Q A +E +QA
Sbjct: 1 MEDEKG-AIVQSLIDTVHDIASISDYRCTVKKQYCNLARRLKLLTPMFEEIRESKEPIPDESMKALVLLKEALDLAKELLRFGSEGSKIYLVLEREQIMNKYHQVTAQLEQALSGISYENLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLSLYNESKDAATDPAVLKRSSEKLQLMGIADLTQESLALHEMVAATGGDPEENIEKMSMLLKKIKDFVQTENPNMDAPSREK-NLPPSGSGQASMNGNHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGIEPPKRPSSSRSNKTTSAYSPAERTKIEILLHKLTSGSPEDQRAAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRTQEHAVTALLNLSICEDNKGSIISAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCSGDQKHLAEAQELGVMGSLIDLAQNGTDRGKRKAQQLLERMSRYVEQQKQGQAQIESQSQA 649
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5CD06 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1018.07 bits (2631), Expect = 0.000e+0
Identity = 499/633 (78.83%), Postives = 564/633 (89.10%), Query Frame = 0
Match: A0A2P5CD06 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1018.07 bits (2631), Expect = 0.000e+0
Identity = 499/633 (78.83%), Postives = 564/633 (89.10%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKS-NLSSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRF 632
MEEEK AL++ LI+ V+EI++I+E+R TV+K YCNL+RRLKLLTPMFEEIRDSKE +PRD+ +ALVS A++ A +LL FGS GSKIY+VLEREQ+MS+ +VT++LE ALSGIS+EKLDISDE++EQVELV+AQFRRAKGR+D PDVEL++DLSCLYN SND + AILKRLV+KLQL GI +LTQESLALHEMV S GDPG SIEKMSMLLKKIK+FVQTENP +D+ EKS S SGQA ++ + P+IP+DFRCPISLELMKDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQ+LSN++LTPNYVLRSLIAQWCEANG+EPPKRP S+R KTT ACSAAER+KIE LLH L +G+PEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLV LLS PDSRTQEHAVTALLNLSICEDNKGSIVS GAV GIV+VLKKGSMEARENAAATLFSLSVVDV K+TIG GAIPPLV LL+EGTQRGKKDAATALFNLCIYQGNKG+AVRA VVPTLM +LTEP G MVDEALAILAIL+SH EGK AIGAA+AVPVLVEVIG+GSPRNKENAAAVLVHLC+GDQQHLV+AQELG+M LV+L+Q GTDRGKRKAAQLLER++RF
Sbjct: 1 MEEEKS-ALVQSLIDAVSEIASISEYRCTVKKHYCNLSRRLKLLTPMFEEIRDSKEALPRDTTKALVSFMEALKSANDLLRFGSEGSKIYLVLEREQVMSKFHDVTAKLEQALSGISYEKLDISDEVKEQVELVLAQFRRAKGRVDTPDVELFEDLSCLYN-SNDAPADSAILKRLVEKLQLVGIDELTQESLALHEMVIASGGDPGASIEKMSMLLKKIKDFVQTENPNMDAPAREKSVPASCSGQAFTDKNHRAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQSLSNTALTPNYVLRSLIAQWCEANGLEPPKRPSSSRPRKTTFACSAAERTKIENLLHKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVTLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDVNKITIGTLGAIPPLVMLLSEGTQRGKKDAATALFNLCIYQGNKGRAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHLEGKAAIGAAEAVPVLVEVIGSGSPRNKENAAAVLVHLCAGDQQHLVEAQELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRF 631
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZZC7 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1017.3 bits (2629), Expect = 0.000e+0
Identity = 504/633 (79.62%), Postives = 570/633 (90.05%), Query Frame = 0
Match: A0A5B6ZZC7 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1017.3 bits (2629), Expect = 0.000e+0
Identity = 504/633 (79.62%), Postives = 570/633 (90.05%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSNLSS-SGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRF 632
ME+EKG AL+++LI++V++ISAI+++R TV+K YCNLARRLKLLTPMFEEIR+SKE +P +SFQAL SL SA EL L FGS GSKIYMVLER+QIM++ QEVT+ LE L GIS+EKLDISDE++EQVELV+AQFRRAKGR+DAPDVELY+DL LYNK+ND A +PA+LKRL +KLQL GIADLTQESLALHEMV+ S GDPGESIEKMSMLLKKIK+FVQTENP +DS T EKS SS SG+A+++ K P+IP+DFRCPISLEL+KDPVIVSTGQTY+RSCIEKWLEAGHGTCPKTQQTL++++LTPNYVLRSLIAQWCEANG+EPPKRP S+R +K TS CS AER+KIETLL L + +PEDQRSAA +IRLLAKRN DNRVAIAEAGAIPLLVGLLS PDSRTQEHAVTALLNLSICEDNKGSIVS GAV GIV+VLKKGSMEARENAAATLFSLSVVD K+TIGASGAI PLVTLL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEPQG MVDEALAILAILSSH EGK AIGAA+AVPVLV+VI NGSPRN+EN+AAVLVHLC+GDQQHLV+AQELG+M L++L+Q GTDRGKRKAAQLLER+NRF
Sbjct: 1 MEDEKG-ALVQKLIDIVDDISAISDYRCTVKKHYCNLARRLKLLTPMFEEIRESKEPLPEESFQALSSLXSAREL----LRFGSEGSKIYMVLERDQIMNKFQEVTAHLEQLLDGISYEKLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLFLYNKNNDVAADPAVLKRLAEKLQLMGIADLTQESLALHEMVSVSGGDPGESIEKMSMLLKKIKDFVQTENPDMDSPTREKSIPSSCSGEASTDGNHKSPVIPDDFRCPISLELLKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGIEPPKRP-SSRPSKITSVCSPAERTKIETLLRKLASCNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKITIGASGAILPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPQGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVDVIRNGSPRNRENSAAVLVHLCAGDQQHLVEAQELGVMGPLLDLAQNGTDRGKRKAAQLLERMNRF 627
BLAST of XM_017397551.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1R3HBM3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1014.99 bits (2623), Expect = 0.000e+0
Identity = 497/638 (77.90%), Postives = 564/638 (88.40%), Query Frame = 0
Match: A0A1R3HBM3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1014.99 bits (2623), Expect = 0.000e+0
Identity = 497/638 (77.90%), Postives = 564/638 (88.40%), Query Frame = 0
Query: 1 MEEEKGGALMKELIEMVNEISAITEFRSTVRKQYCNLARRLKLLTPMFEEIRDSKEIVPRDSFQALVSLRSAMELALELLLFGSHGSKIYMVLEREQIMSRLQEVTSQLECALSGISFEKLDISDEIQEQVELVIAQFRRAKGRIDAPDVELYDDLSCLYNKSNDPAVEPAILKRLVDKLQLTGIADLTQESLALHEMVTTSDGDPGESIEKMSMLLKKIKEFVQTENPKIDSSTTEKSNL--SSSGQATSNSTEKGPIIPEDFRCPISLELMKDPVIVSTGQTYDRSCIEKWLEAGHGTCPKTQQTLSNSSLTPNYVLRSLIAQWCEANGMEPPKRPGSARLTKTTSACSAAERSKIETLLHMLRTGSPEDQRSAASDIRLLAKRNTDNRVAIAEAGAIPLLVGLLSIPDSRTQEHAVTALLNLSICEDNKGSIVSCGAVSGIVNVLKKGSMEARENAAATLFSLSVVDVYKVTIGASGAIPPLVTLLAEGTQRGKKDAATALFNLCIYQGNKGKAVRARVVPTLMAMLTEPQGRMVDEALAILAILSSHSEGKVAIGAADAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQHLVKAQELGLMDLLVELSQTGTDRGKRKAAQLLERLNRFSDQE 636
MEEEKG AL++ LI+ VN+I++I ++R V+KQYCNLARRLKLLTPMFEEIR+SKE +P ++ +ALVSL+ A+ A ELL FGS GSKIY+VLEREQIM + E+T++LE ALSGIS+E LDISDE++EQVELV+AQFRRAKGR+DAPDVELYDDL LY+KSND A +P +L+RL DKLQL GIA+LTQES+ALHEMV+ S GDPGE+ EKMS LLKKIK+FVQTENP +D+ EK NL SSSGQAT++ K P+IP+DFRCPISLELMKDPVIVSTGQTY+R+CIEKWLE GHGTCPKTQQTL++ +LTPNYVLRSLIAQWCEANG+EPPKRP S+R +KTTSACS AER+KIE LL L + +PEDQR AA +IRLLAKRN DNRVAIAEAGAIPLLV LLS PDSRTQEHAVTALLNLSICEDNKGSI+S GAV GIV VLKKGSMEARENAAATLFSLSVVD KVTIG SGAIPPLVTLL+EGTQRGKKDAATALFNLCIYQGNKGKAVRA VVPTLM +LTEP G MVDEALAILAIL+SH EGK AIGAADAVPVLV+VIGNGSPRN+ENAAAVLVHLCSGDQQHL +AQELG+M LV+L+Q GTDRGKRKAAQLLER++RF +Q+
Sbjct: 1 MEEEKG-ALVQSLIDSVNQIASIGDYRCPVKKQYCNLARRLKLLTPMFEEIRESKEPIPEETVKALVSLKEALVSAKELLRFGSEGSKIYLVLEREQIMHKFHELTAKLEQALSGISYENLDISDEVKEQVELVLAQFRRAKGRVDAPDVELYDDLLSLYDKSNDAAADPEVLRRLADKLQLVGIAELTQESIALHEMVSASGGDPGETFEKMSNLLKKIKDFVQTENPNMDAPAREK-NLPPSSSGQATTDGNHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERACIEKWLEQGHGTCPKTQQTLTSPALTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTTSACSPAERTKIEILLRKLTSSNPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRTQEHAVTALLNLSICEDNKGSIISSGAVPGIVQVLKKGSMEARENAAATLFSLSVVDENKVTIGGSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHPEGKAAIGAADAVPVLVDVIGNGSPRNRENAAAVLVHLCSGDQQHLAEAQELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFVEQQ 636
| Match Name | Stats | Description |
|---|---|---|
| A0A2G9GWQ2 | E-Value: 0.000e+0, PID: 78.27 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A6I9TUW9 | E-Value: 0.000e+0, PID: 78.27 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A5J5BM02 | E-Value: 0.000e+0, PID: 78.17 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A5B6ZX12 | E-Value: 0.000e+0, PID: 79.94 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A5B6ZWQ6 | E-Value: 0.000e+0, PID: 79.94 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A2P5EJ87 | E-Value: 0.000e+0, PID: 79.30 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A067LAL3 | E-Value: 0.000e+0, PID: 76.96 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A2P5CD06 | E-Value: 0.000e+0, PID: 78.83 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A5B6ZZC7 | E-Value: 0.000e+0, PID: 79.62 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A1R3HBM3 | E-Value: 0.000e+0, PID: 77.90 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |