Resource Type:
Polypeptide
Name:
XM_017397093.1
Identifier:
XM_017397093.1-protein
Sequence:
MEASDAEVNGANGNGVNGNGVNGTNGVNGNGNGAVEEALPPPPPIPEDVV
PIRVVEDPEPPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGH
FFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSL
FTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQ
SKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQG
CLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTM
IIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITG
LSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDL
PCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDR
MKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGED
FFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKG
INIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPER
KNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS
KLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLI
SKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPD
QIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHH
TKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVL
LDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMK
FDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFFV
Sequence Length:
939
Sequence Checksum:
ac48a04a5e51039984b961686b4e4ea5
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017397093.1, derives from mRNA, XM_017397093.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BNV7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544478.1}))
HSP 1 Score: 1571.6 bits (4068), Expect = 0.000e+0
Identity = 737/878 (83.94%), Postives = 809/878 (92.14%), Query Frame = 0
Match: A0A5J5BNV7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544478.1}))
HSP 1 Score: 1571.6 bits (4068), Expect = 0.000e+0
Identity = 737/878 (83.94%), Postives = 809/878 (92.14%), Query Frame = 0
Query: 61 PVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
PV KK RVP+ARR L SKG K+ +LTNHFKVNVTNVDGHFFHYSV++ YEDGRPVDGKGIGRKV+DRVH+TY EL GKDFA+DGEKSLFTVG LPRNKLEFTVVLED++SN+ GN SP GSP+E+DRKR+RRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NF DVGGGVLGCRGFHSSFRT+QGGLSLNIDVSTTMIIQPGPVVDFLIANQ KDPF++DWAKAKRVLKNLRVKT P+NTE+KITGLS+K C+E MFS+KQ+G DE+GE T E++VYDYFVN R+I L+YS DLPCINVGKPKRPT+ PLELCSLVSLQRYTKAL+T QRA LVEKSRQKPQ+RM+ L++AL+INNY EP+L +CG+S+ NFTQVEGR+L+APRL+VGNGEDFFPRNGRWNFNNKKLV+ T I+RWAVVNFSARC+I+GL+ DLIKCG +KGI++ PFDVFEENPQ+RRAPPLVRVEKMFE + SKLPGAPQFLLCLLPERKNS LYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIP+VSK PTIILGMDVSHGSPGQSDVPS+AAVVSSR WPLIS+YRASVRTQSPKVEMIDSLFK+V+D +DDGI+REL+LDFY SSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKW PKF VI+AQKNHHTKFFQP SPDNVPPGT+IDN++CHPRN DFYLCA AGMIGTTRPTHYHVLLDEIGFS DDLQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+DMSETSSSHGGVT+AG PV QLPRLQEKVCNSMFF
Sbjct: 38 PVKKKVVRVPLARRNLGSKGQKIPILTNHFKVNVTNVDGHFFHYSVSVSYEDGRPVDGKGIGRKVIDRVHETYDTELAGKDFAFDGEKSLFTVGPLPRNKLEFTVVLEDITSNRNNGNCSPGGHGSPNENDRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFADVGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLIANQGVKDPFSIDWAKAKRVLKNLRVKTSPSNTEYKITGLSEKPCREQMFSLKQKGGKDEDGEVQTLEVTVYDYFVNYRQIELRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDALKINNYDAEPMLHSCGISIGTNFTQVEGRVLSAPRLKVGNGEDFFPRNGRWNFNNKKLVDATKIERWAVVNFSARCDIRGLVRDLIKCGEMKGIHVDAPFDVFEENPQYRRAPPLVRVEKMFEEIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAVEHSPSIPIVSKAPTIILGMDVSHGSPGQSDVPSVAAVVSSRQWPLISRYRASVRTQSPKVEMIDSLFKQVSDTEDDGIIRELMLDFYVSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDMSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFF 915
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C5D4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8550054.1}))
HSP 1 Score: 1569.67 bits (4063), Expect = 0.000e+0
Identity = 739/883 (83.69%), Postives = 810/883 (91.73%), Query Frame = 0
Match: A0A5J5C5D4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8550054.1}))
HSP 1 Score: 1569.67 bits (4063), Expect = 0.000e+0
Identity = 739/883 (83.69%), Postives = 810/883 (91.73%), Query Frame = 0
Query: 56 EDPEPPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
ED P KK RVPIARRGL SKG K+ LLTNHFKVNVTNVDGHFFHYSV+L YED RPVDGKGIGR+V+DRVH+TY EL GKDFAYDGEKSLFT+G LPRNKLEFTVVLED+ SN+ GN SP + GSP+E+DRKR+RRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NF DVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN KDPF++DWAKAKRVLKNLRVKT P+N+E+KITGLS+K CKE FS+KQ+G DE+GE T E++VYDYFVN R I L+YS DLPCINVGKPKRPT+ PLELCSLVSLQRYTKAL T QRA LVEKSRQKPQ+RM+ L++AL++NNY EP+LR+CG+S+S+NFTQVEGR+L+APRL+VGNGEDFFPRNGRWNFNNKKLV+PT I+RW VVNFSARC+I+GL+ DLIKCG LKGI+I PFDVFEENPQ RRAPPLVRVEKMFE + SKLPGAPQFLLCLLPERKNS LYGPWKRKNLAE+GIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIP+VSK PTIILGMDVSHGSPGQSD+PSIAAVVSSR WPLIS++RASVRTQSPKVEMIDSLFK+V+D +DDGI+RELLL+FY SSGKRKPDQ IIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKW PKF VI+AQKNHHTKFFQP SPDNVPPGTVIDN++CHPRNNDFYLCA AGMIGTTRPTHYHVLLDE+GFSPDDLQ+ VHSLSYVYQRSTTAISVVAPICYAHLAATQ+GQFMKF+DMSETSSSHGG+T+AG PV QLPRLQE VCNSMFF
Sbjct: 33 EDAPEPAKKKVVRVPIARRGLGSKGQKIPLLTNHFKVNVTNVDGHFFHYSVSLSYEDDRPVDGKGIGRRVIDRVHETYDTELAGKDFAYDGEKSLFTIGPLPRNKLEFTVVLEDIISNRNNGNCSPGSRGSPNENDRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFSIDWAKAKRVLKNLRVKTSPSNSEYKITGLSEKPCKEQTFSLKQKGGKDEDGEVQTLEVTVYDYFVNYRNIELRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKALNTFQRASLVEKSRQKPQERMRVLSDALKVNNYDAEPMLRSCGISISSNFTQVEGRVLSAPRLKVGNGEDFFPRNGRWNFNNKKLVDPTKIERWGVVNFSARCDIRGLVRDLIKCGELKGIHIDPPFDVFEENPQFRRAPPLVRVEKMFEDIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEHGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAVEHSPSIPVVSKAPTIILGMDVSHGSPGQSDMPSIAAVVSSRQWPLISRFRASVRTQSPKVEMIDSLFKRVSDTEDDGIIRELLLEFYVSSGKRKPDQFIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQDLVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDMSETSSSHGGMTSAGAIPVPQLPRLQENVCNSMFF 915
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U8U2B2 ((Argonaute 4 {ECO:0000313|EMBL:AWM95729.1}))
HSP 1 Score: 1568.52 bits (4060), Expect = 0.000e+0
Identity = 742/883 (84.03%), Postives = 806/883 (91.28%), Query Frame = 0
Match: A0A2U8U2B2 ((Argonaute 4 {ECO:0000313|EMBL:AWM95729.1}))
HSP 1 Score: 1568.52 bits (4060), Expect = 0.000e+0
Identity = 742/883 (84.03%), Postives = 806/883 (91.28%), Query Frame = 0
Query: 56 EDPEPPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
+ P PV KK RVPIARRGLA+KG K+QLLTNHFKV V NVDGHFFHYSV+L YEDGRPVDGKG+GRKV+DRV +TY EL GKDFAYDGEKSLFTVG LPRNKLEFTVVLED+ SN+ GNSSP GSP+E DRKRMRRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NF DVGGGVLGCRGFHSSFRT+QGGLSLNIDVSTTMIIQPGPVVDFLIANQN +DPF+LDW+KAKR LKNLR+KT P N EFKITGLS+K+CK+ MF++KQRG D +GEP T E++VYDYFVN R I L+YSGDLPCINVGKPKRPT+ PLELCSLVSLQRYTKAL+TLQRA LVEKSRQKPQ+RMK L+ AL+ NNY EPLLR+CG+S+S +FTQV+GR+L APRL+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+ Q L+ DLIKCG LKGI I PFDVF+ENPQ+RRAPP+ RVEKMFE + SKLPGAPQFLLCLLPERKNS LYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAK+GGLNS L +E+SPSIPLVSK PTIILGMDVSHGSPGQSDVPSIAAVVSSR WPLISKYRASVRTQSPKVEMIDSLFKK ++ +DDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIE+CKFLDEKW PKF VI+AQKNHHTKFFQP SPDNVPPGTVIDN++CHPRNNDFYLCA AGMIGTTRPTHYHVLLD++GFS DDLQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+++SETSSSHGGVT+AG PV QLPRLQE VCNSMFF
Sbjct: 46 DQPPEPVKKKVMRVPIARRGLANKGQKIQLLTNHFKVGVNNVDGHFFHYSVSLAYEDGRPVDGKGVGRKVIDRVQETYDTELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVISNRNNGNSSPNGHGSPNEGDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSLDWSKAKRTLKNLRIKTSPANQEFKITGLSEKTCKDQMFTLKQRG-NDADGEPQTIEVTVYDYFVNHRGIELRYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMKVLSEALKCNNYDSEPLLRSCGISISTSFTQVDGRVLPAPRLKVGNGEDFFPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDTQSLVRDLIKCGDLKGIQIDAPFDVFQENPQNRRAPPMARVEKMFEDIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKMGGLNSLLAVEHSPSIPLVSKAPTIILGMDVSHGSPGQSDVPSIAAVVSSRQWPLISKYRASVRTQSPKVEMIDSLFKKTSETEDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIESCKFLDEKWNPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDDVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEELSETSSSHGGVTSAGAVPVPQLPRLQENVCNSMFF 927
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZMP7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA44791.1}))
HSP 1 Score: 1568.13 bits (4059), Expect = 0.000e+0
Identity = 738/883 (83.58%), Postives = 807/883 (91.39%), Query Frame = 0
Match: A0A5B6ZMP7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA44791.1}))
HSP 1 Score: 1568.13 bits (4059), Expect = 0.000e+0
Identity = 738/883 (83.58%), Postives = 807/883 (91.39%), Query Frame = 0
Query: 56 EDPEPPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
ED P KK RVPIARRG SKG K+ LLTNHFKVNVTNVDGHFFHYSV+L YEDGRPVDGKGIGRKV+DRVH+TY EL GKDFAYDGEKSLFTVG LPRNKLEFTVVLED++SN+ GN SP GSP+E+DRKR+RRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NF DVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN KDPF++DWAKAKR LKNLRVKT P N+E+KITGLS+K C+E FS+KQ+G DE+GE T E++VYDYFVN R I L+YS DLPCINVGKPKRPT+ PLELCSLVSLQRYTKAL T QRA LVEKSRQKPQ+RM+ L++AL++NNY EP+LR+CG+S+S+NFTQVEGR+L+APRL+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+I+GL+ DLIKCG LKGI+I PFDVFEEN Q+RRAPPLVRVEKMFE + SKLPGAPQFLLCLLPERKNS LYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIP+VSK PTIILGMDVSHGSPGQSDVPSIAAVVSSR WP IS+YRASVRTQSPKVEMIDSL+K+V+D +DDGI+RELLLDFY SSGKRKPDQ IIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKW PKF VI+AQKNHHTKFFQP +P+NVPPGT+IDN++CHPRNNDFYLCA AGMIGTTRPTHYHVLLDE+GFS DDLQ+ VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+DMSETSSSHGG+T+AG PV QLPRLQE VCNSMFF
Sbjct: 33 EDASEPAKKKVVRVPIARRGPGSKGQKIPLLTNHFKVNVTNVDGHFFHYSVSLSYEDGRPVDGKGIGRKVIDRVHETYDTELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDITSNRNNGNCSPGGHGSPNENDRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFSIDWAKAKRTLKNLRVKTNPANSEYKITGLSEKPCREQTFSLKQKGGKDEDGEVQTLEVTVYDYFVNYRNIELRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKALNTFQRASLVEKSRQKPQERMRVLSDALKVNNYDAEPMLRSCGISISSNFTQVEGRVLSAPRLKVGNGEDFFPRNGRWNFNNKKLVDPTKIERWAVVNFSARCDIRGLVRDLIKCGDLKGISIDPPFDVFEENQQYRRAPPLVRVEKMFEGIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLAVEHSPSIPVVSKAPTIILGMDVSHGSPGQSDVPSIAAVVSSRRWPQISRYRASVRTQSPKVEMIDSLYKRVSDTEDDGIIRELLLDFYVSSGKRKPDQFIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPGAPENVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQDLVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDMSETSSSHGGMTSAGAVPVPQLPRLQENVCNSMFF 915
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2KN09 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p020174:mrna}))
HSP 1 Score: 1566.21 bits (4054), Expect = 0.000e+0
Identity = 740/883 (83.81%), Postives = 806/883 (91.28%), Query Frame = 0
Match: A0A7N2KN09 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p020174:mrna}))
HSP 1 Score: 1566.21 bits (4054), Expect = 0.000e+0
Identity = 740/883 (83.81%), Postives = 806/883 (91.28%), Query Frame = 0
Query: 56 EDPEPPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
+ P PV KK RVPIARRGLA+KG K+QLLTNHFKV V NVDGHFFHYSV+L YEDGRPVDGKG+GRKV+DRV +TY EL GKDFAYDGEKSLFTVG LPRNKLEFTVVLED+ SN+ GNSSP GSP+E DRKRMRRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NF DVGGGVLGCRGFHSSFRT+QGGLSLNIDVSTTMIIQPGPVVDFLIANQN +DPF+LDW+KAKR LKNLR+KT P N EFKITGLS+K+CK+ MF++KQRG D +GEP T E++VYDYFVN R I L+YSGDLPCINVGKPKRPT+ PLELCSLVSLQRYTKAL+TLQRA LVEKSRQKPQ+RMK L+ AL+ N+Y EPLLR+CG+S+S +FTQV+GR+L APRL+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+ Q L+ DLIKCG LKGI I PFDVF+ENPQ+RRAPP+ RVEKMFE + SKLPGAPQFLLCLLPERKNS LYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAK+GGLNS L +E++PSIPLVSK PTIILGMDVSHGSPGQSDVPSIAAVVSSR WPLISKYRASVRTQSPKVEMIDSLFKK ++ +DDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIE+CKFLDEKW PKF VI+AQKNHHTKFFQP SPDNVPPGTVIDN++CHPRNNDFYLCA AGMIGTTRPTHYHVLLD++GFS DDLQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+++SETSSSHGGVT+AG PV QLPRLQE VCNSMFF
Sbjct: 46 DQPPEPVKKKVMRVPIARRGLANKGQKIQLLTNHFKVGVNNVDGHFFHYSVSLAYEDGRPVDGKGVGRKVIDRVQETYDTELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVISNRNNGNSSPNGHGSPNEGDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSLDWSKAKRTLKNLRIKTSPANQEFKITGLSEKTCKDQMFTLKQRG-NDADGEPQTIEVTVYDYFVNHRGIELRYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMKVLSEALKCNHYDSEPLLRSCGISISTSFTQVDGRVLPAPRLKVGNGEDFFPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDTQSLVRDLIKCGDLKGIQIDAPFDVFQENPQNRRAPPMARVEKMFEDIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKMGGLNSLLAVEHTPSIPLVSKAPTIILGMDVSHGSPGQSDVPSIAAVVSSRQWPLISKYRASVRTQSPKVEMIDSLFKKTSETEDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIESCKFLDEKWNPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDDVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEELSETSSSHGGVTSAGAVPVPQLPRLQENVCNSMFF 927
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DLQ9 ((Argonaute family protein {ECO:0000313|EMBL:GFS37844.1}))
HSP 1 Score: 1565.82 bits (4053), Expect = 0.000e+0
Identity = 741/885 (83.73%), Postives = 813/885 (91.86%), Query Frame = 0
Match: A0A7J0DLQ9 ((Argonaute family protein {ECO:0000313|EMBL:GFS37844.1}))
HSP 1 Score: 1565.82 bits (4053), Expect = 0.000e+0
Identity = 741/885 (83.73%), Postives = 813/885 (91.86%), Query Frame = 0
Query: 57 DPE---PPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
DPE P KK RVPIARRG SKG K+ +LTNHFKVNVTNVDGHFFHYSV++ YEDGRPVDGKG+GRKV+DRVH+TY EL GKDFAYDGEKSLFTVG LPRNKLEFTVVLED++SN+ GN SP GSP+E+DRKR+RRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN KDPF +DWAKAKRVLKNLRVKT P+N E KITGLS+K CKE MFS+KQ+ + D +GE T E++VYDYFVN R I L+YS DLPCINVGKPKRPTY PLELCSLVSLQRYTKAL+T QRA LVEKSRQKPQ+RM+ L++AL+INNY EP+LR+CGVS+ NNFTQ+EGR+LAAPRL+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+I+GL+ DLIKCG +KGI+I PFDVFEEN Q+RRAPPLVRVEKMFE++ SKLPGAPQFLLCLLPERKNS LYGPWKRKNL++YGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIPLVSKVPTIILGMDVSHGSPGQSD+PSIAAVVSSR+WPLIS+YRA VRTQSPKVEMIDSLFK+V+D +D+GI+RELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKWCPKF VI+AQKNHHTKFFQP SPDNVPPGTVID+++CHPRNNDFY+CA AGMIGTTRPTHYHVLLDE+GFS DDLQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+D SETSSSHGG+T+AG PV Q+P+LQE VCNSMFF
Sbjct: 31 DPEHISEPAKKKVVRVPIARRGTGSKGQKIPILTNHFKVNVTNVDGHFFHYSVSVSYEDGRPVDGKGVGRKVIDRVHETYDTELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVTSNRNNGNGSP---GSPNENDRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDARNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFQIDWAKAKRVLKNLRVKTSPSNAECKITGLSEKPCKEQMFSLKQKSK-DGDGEVQTLEVTVYDYFVNYRHIELRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDALKINNYDAEPMLRSCGVSIGNNFTQIEGRVLAAPRLKVGNGEDFFPRNGRWNFNNKKLVDPTKIERWAVVNFSARCDIRGLVRDLIKCGEMKGIHIDAPFDVFEENQQYRRAPPLVRVEKMFENIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLSDYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAVEHSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSRNWPLISRYRACVRTQSPKVEMIDSLFKRVSDTEDEGIIRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWCPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDSKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDASETSSSHGGLTSAGAVPVPQMPKLQENVCNSMFF 911
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P7Y2 ((Protein argonaute like {ECO:0000313|EMBL:PSR86728.1}))
HSP 1 Score: 1564.67 bits (4050), Expect = 0.000e+0
Identity = 740/885 (83.62%), Postives = 813/885 (91.86%), Query Frame = 0
Match: A0A2R6P7Y2 ((Protein argonaute like {ECO:0000313|EMBL:PSR86728.1}))
HSP 1 Score: 1564.67 bits (4050), Expect = 0.000e+0
Identity = 740/885 (83.62%), Postives = 813/885 (91.86%), Query Frame = 0
Query: 57 DPE---PPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
DPE P KK RVPIARRG SKG K+ +LTNHFKVNVTNVDGHFFHYSV++ YEDGRPVDGKG+GRKV+DRVH+TY EL GKDFAYDGEKSLFTVG LPRNKLEFTVVLED++SN+ GN SP GSP+E+DRKR+RRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN KDPF +DWAKAKRVLKNLRVKT P+N E KITGLS+K CKE MFS+KQ+ + D +GE T E++VYDYFVN R I L+YS DLPCINVGKPKRPTY PLELCSLVSLQRYTKAL+T QRA LVEKSRQKPQ+RM+ L++AL+INNY EP+LR+CGVS+ NNFTQ+EGR+LAAPRL+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+I+GL+ DLIKCG +KGI+I PFDVFEEN Q+RRAPPLVRVEKMFE++ SKLPGAPQFLLCLLPERKNS LYGPWKRKNL++YGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIPLVSKVPTIILGMDVSHGSPGQSD+PSIAAVVSSR+WPLIS+YRA VRTQSPKVEMIDSLFK+V+D +D+GI+RELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKWCPKF VI+AQKNHHTKFFQP SPDNVPPGTVID+++CHPRNNDFY+CA AGMIGTTRPTHYHVLLDE+GFS D+LQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+D SETSSSHGG+T+AG PV Q+P+LQE VCNSMFF
Sbjct: 31 DPEHISEPAKKKVVRVPIARRGTGSKGQKIPILTNHFKVNVTNVDGHFFHYSVSVSYEDGRPVDGKGVGRKVIDRVHETYDTELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVTSNRNNGNGSP---GSPNENDRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDARNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFQIDWAKAKRVLKNLRVKTSPSNAECKITGLSEKPCKEQMFSLKQKSK-DGDGEVQTLEVTVYDYFVNYRHIELRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDALKINNYDAEPMLRSCGVSIGNNFTQIEGRVLAAPRLKVGNGEDFFPRNGRWNFNNKKLVDPTKIERWAVVNFSARCDIRGLVRDLIKCGEMKGIHIDAPFDVFEENQQYRRAPPLVRVEKMFENIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLSDYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAVEHSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSRNWPLISRYRACVRTQSPKVEMIDSLFKRVSDTEDEGIIRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWCPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDSKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLLDEVGFSADELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDASETSSSHGGLTSAGAVPVPQMPKLQENVCNSMFF 911
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PFD7 ((Protein argonaute like {ECO:0000313|EMBL:PSR90090.1}))
HSP 1 Score: 1560.81 bits (4040), Expect = 0.000e+0
Identity = 737/878 (83.94%), Postives = 811/878 (92.37%), Query Frame = 0
Match: A0A2R6PFD7 ((Protein argonaute like {ECO:0000313|EMBL:PSR90090.1}))
HSP 1 Score: 1560.81 bits (4040), Expect = 0.000e+0
Identity = 737/878 (83.94%), Postives = 811/878 (92.37%), Query Frame = 0
Query: 61 PVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
PV KK RVPIARRGL SKG K+ +LTNHFKVNVTNVDGHFFHYSV++ YEDGRPVDGKG+GRKV+DRVH+TY EL GK+FAYDGEKSLFTVG LPRNKLEFTVVLED++SN+ GN SP GSP+E+DRKRMRRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN KDPF +DWAKAKRVLKNLRVKT P+N E KITGLS+K CKE MFS+KQ+ + D +GE T E++VYDYFVN R I L+YS DLPCINVGKPKRPTY P+ELCSLVSLQRYTKAL+T QRA LVEKSRQKPQ+RM+ LT+AL+INNY EP+LR+CGVS+ NNFTQ+EGR+L AP+L+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+I+GL+ DLIKCG +KGI+I PFDVFEEN Q+RRAPPLVRVEKMFE++ SKLPGAPQFLLCLLPERKNS LYGPWKRKNL++YGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIPLVSKVPTIILGMDVSHGSPGQSD+PSIAAVVSSR+WPLIS+YRA VRTQSPKVEMIDSLFK+V+D +D+GI+RELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKWCPKF VI+AQKNHHTKFFQP SPDNVPPGTVID+++CHPRNNDFY+CA AGMIGTTRPTHYHVLLDE+GFS D+LQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+D SETSSSHGG+T+AG PV Q+P+LQE VCNSMFF
Sbjct: 38 PVKKKVVRVPIARRGLGSKGQKIPILTNHFKVNVTNVDGHFFHYSVSVSYEDGRPVDGKGVGRKVIDRVHETYDTELAGKNFAYDGEKSLFTVGPLPRNKLEFTVVLEDVTSNRNNGNGSP---GSPNENDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDARNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFQIDWAKAKRVLKNLRVKTSPSNAECKITGLSEKPCKEQMFSLKQKAK-DGDGEFQTLEVTVYDYFVNYRHIELRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLTDALKINNYDAEPMLRSCGVSIGNNFTQIEGRVLPAPKLKVGNGEDFFPRNGRWNFNNKKLVDPTKIERWAVVNFSARCDIRGLVRDLIKCGEMKGIHIDAPFDVFEENQQYRRAPPLVRVEKMFENIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLSDYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAVEHSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSRNWPLISRYRACVRTQSPKVEMIDSLFKRVSDTEDEGIIRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWCPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDSKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLLDEVGFSADELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDASETSSSHGGLTSAGAVPVPQMPKLQESVCNSMFF 911
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0H4R3 ((Argonaute family protein {ECO:0000313|EMBL:GFZ18052.1}))
HSP 1 Score: 1560.43 bits (4039), Expect = 0.000e+0
Identity = 737/878 (83.94%), Postives = 811/878 (92.37%), Query Frame = 0
Match: A0A7J0H4R3 ((Argonaute family protein {ECO:0000313|EMBL:GFZ18052.1}))
HSP 1 Score: 1560.43 bits (4039), Expect = 0.000e+0
Identity = 737/878 (83.94%), Postives = 811/878 (92.37%), Query Frame = 0
Query: 61 PVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSPAADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAAGPAPVAQLPRLQEKVCNSMFF 938
PV KK RVPIARRGL SKG K+ +LTNHFKVNVTNVDGHFFHYSV++ YEDGRPVDGKG+GRKV+DRVH+TY EL GK+FAYDGEKSLFTVG LPRNKLEFTVVLED++SN+ GN SP GSP+E+DRKRMRRPYQSKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN KDPF +DWAKAKRVLKNLRVKT P+N E KITGLS+K CKE MFS+KQ+ + D +GE T E++VYDYFVN R I L+YS DLPCINVGKPKRPTY P+ELCSLVSLQRYTKAL+T QRA LVEKSRQKPQ+RM+ LT+AL+INNY EP+LR+CGVS+ NNFTQ+EGR+L AP+L+VGNGEDFFPRNGRWNFNNKKLV+PT I+RWAVVNFSARC+I+GL+ DLIKCG +KGI+I PFDVFEEN Q+RRAPPLVRVEKMFE++ SKLPGAPQFLLCLLPERKNS LYGPWKRKNL++YGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L +E+SPSIPLVSKVPTIILGMDVSHGSPGQSD+PSIAAVVSSR+WPLIS+YRA VRTQSPKVEMIDSLFK+V+D +D+GI+RELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKWCPKF VI+AQKNHHTKFFQP SPDNVPPGTVID+++CHPRNNDFY+CA AGMIGTTRPTHYHVLLDE+GFS D+LQE VHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+D SETSSSHGG+T+AG PV Q+P+LQE VCNSMFF
Sbjct: 38 PVKKKIVRVPIARRGLGSKGQKIPILTNHFKVNVTNVDGHFFHYSVSVSYEDGRPVDGKGVGRKVIDRVHETYDTELAGKNFAYDGEKSLFTVGPLPRNKLEFTVVLEDVTSNRNNGNGSP---GSPNENDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDARNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFQIDWAKAKRVLKNLRVKTSPSNAECKITGLSEKPCKEQMFSLKQKAK-DGDGEFQTLEVTVYDYFVNYRHIELRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLTDALKINNYDAEPMLRSCGVSIGNNFTQIEGRVLPAPKLKVGNGEDFFPRNGRWNFNNKKLVDPTKIERWAVVNFSARCDIRGLVRDLIKCGEMKGIHIDAPFDVFEENQQYRRAPPLVRVEKMFENIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLSDYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAVEHSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSRNWPLISRYRACVRTQSPKVEMIDSLFKRVSDTEDEGIIRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWCPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDSKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLLDEVGFSADELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDASETSSSHGGLTSAGAVPVPQMPKLQESVCNSMFF 911
BLAST of XM_017397093.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D5FQ91 ((Argonaute 4-like protein {ECO:0000313|EMBL:ACZ04920.1}))
HSP 1 Score: 1560.43 bits (4039), Expect = 0.000e+0
Identity = 763/928 (82.22%), Postives = 835/928 (89.98%), Query Frame = 0
Match: D5FQ91 ((Argonaute 4-like protein {ECO:0000313|EMBL:ACZ04920.1}))
HSP 1 Score: 1560.43 bits (4039), Expect = 0.000e+0
Identity = 763/928 (82.22%), Postives = 835/928 (89.98%), Query Frame = 0
Query: 16 VNGNGVNGT--NGVNGNGNGAVEEALPPPPPIPEDVVPIRV-VEDPEPPVVKKPPRVPIARRGLASKGNKVQLLTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHDTYKAELEGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDMSSNKVKGNSSP-AADGSPHESDRKRMRRPYQSKTYKVEISYAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVNNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFTLDWAKAKRVLKNLRVKTIPTNTEFKITGLSDKSCKELMFSMKQRGETDENGEPLTTELSVYDYFVNVRKISLKYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTLQRAQLVEKSRQKPQDRMKTLTNALRINNYADEPLLRACGVSVSNNFTQVEGRILAAPRLRVGNGEDFFPRNGRWNFNNKKLVEPTTIDRWAVVNFSARCNIQGLITDLIKCGGLKGINIARPFDVFEENPQHRRAPPLVRVEKMFESMMSKLPGAPQFLLCLLPERKNSLLYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSKLCIENSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISKYRASVRTQSPKVEMIDSLFKKVADDKDDGIMRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWCPKFTVIIAQKNHHTKFFQPASPDNVPPGTVIDNRICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEIGFSPDDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSH-GGVTAAGPAPVAQLPRLQEKVCNSMFF 938
VNGNG + + VNGNGNGA + PPPP IP DVVP+R E P PV KK RVPIARRGLASKG K+ LLTNHFKVNVTNV+GHFFHYSVALFYEDGRPVDGKG+G KV+DRV +TY EL GKDFAYDGEKSLFTVG LPRNK EF VVLED+SSN+V GN+SP A DG+ DRKRMRRP+ SKT+KVEIS+AAKIPMQAIA ALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHND NF D+GGGV+GCRGFHSSFRTTQGGLSLN+DVSTTMI+QPGPVVDFLIANQNA+DPF+LDWAKAKR LKNLR+KT P NTE+KITGLS+K CKE MFS+KQ+ +ENGE T E++VYDYFVN RKI L+YSGDLPCINVGKPKRPTY PLELCSLVSLQRYTKAL+T QRA LVEKSRQKPQ+RM+ L++AL+ +NY E +LR+ G+S+S+NFTQVEGR+L AP+L+VGNGEDFFPRNGRWNFNNKKLV+PT I++WAVVNFSARC+I+GL+ DLIKCG +KGI + PFDVFEE+PQ RRAPP+VRVEKMFE + SKLPGAPQFLLCLLPERKNS LYGPWKRKNL+EYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNS L IE+SPSIP+VSKVPTII+GMDVSHGSPGQSDVPSIAAVVSSR WP IS+YRASVRTQSPKVEMIDSLFKK +D +DDGIMRELLLDFY SS KRKPDQIIIFRDGVSESQFNQVLN+EL+QIIEACKFLDEKW PKF VI+AQKNHHTKFFQP SPDNVPPGTVIDN++CHPRNNDFYLCAQAGMIGTTRPTHYHVLLDE+GFS DDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKF+D SETSSSH GGVT AGP PVAQLPRLQEKV +SMFF
Sbjct: 10 VNGNGESSLEPDVVNGNGNGAQDALPPPPPIIPPDVVPVRADTELPLEPVKKKVLRVPIARRGLASKGQKIPLLTNHFKVNVTNVEGHFFHYSVALFYEDGRPVDGKGVGGKVIDRVQETYDTELAGKDFAYDGEKSLFTVGPLPRNKHEFIVVLEDVSSNRVNGNASPDAGDGN----DRKRMRRPFHSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDAKNFADLGGGVVGCRGFHSSFRTTQGGLSLNVDVSTTMIVQPGPVVDFLIANQNARDPFSLDWAKAKRTLKNLRIKTSPANTEYKITGLSEKPCKEQMFSLKQKS-GNENGEAETLEVTVYDYFVNYRKIELRYSGDLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDALKTSNYDAERMLRSSGISISSNFTQVEGRVLQAPKLKVGNGEDFFPRNGRWNFNNKKLVDPTKIEKWAVVNFSARCDIRGLVRDLIKCGEMKGIRVEAPFDVFEESPQCRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPERKNSELYGPWKRKNLSEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLAIEHSPSIPMVSKVPTIIVGMDVSHGSPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDSLFKKTSDTEDDGIMRELLLDFYVSSQKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEMGFSADDLQEFVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGGVTTAGPVPVAQLPRLQEKVAHSMFF 932
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5BNV7 | E-Value: 0.000e+0, PID: 83.94 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8544... [more] |
| A0A5J5C5D4 | E-Value: 0.000e+0, PID: 83.69 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8550... [more] |
| A0A2U8U2B2 | E-Value: 0.000e+0, PID: 84.03 | (Argonaute 4 {ECO:0000313|EMBL:AWM95729.1})[more] |
| A0A5B6ZMP7 | E-Value: 0.000e+0, PID: 83.58 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4479... [more] |
| A0A7N2KN09 | E-Value: 0.000e+0, PID: 83.81 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A7J0DLQ9 | E-Value: 0.000e+0, PID: 83.73 | (Argonaute family protein {ECO:0000313|EMBL:GFS378... [more] |
| A0A2R6P7Y2 | E-Value: 0.000e+0, PID: 83.62 | (Protein argonaute like {ECO:0000313|EMBL:PSR86728... [more] |
| A0A2R6PFD7 | E-Value: 0.000e+0, PID: 83.94 | (Protein argonaute like {ECO:0000313|EMBL:PSR90090... [more] |
| A0A7J0H4R3 | E-Value: 0.000e+0, PID: 83.94 | (Argonaute family protein {ECO:0000313|EMBL:GFZ180... [more] |
| D5FQ91 | E-Value: 0.000e+0, PID: 82.22 | (Argonaute 4-like protein {ECO:0000313|EMBL:ACZ049... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |