XM_017397178.1

Resource Type: 
Polypeptide
Name: 
XM_017397178.1
Identifier: 
XM_017397178.1-protein
Sequence: 
MEIDESSTAPRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSV
MYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYKPCKKAL
QFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKK
PVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYIS
YSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPP
FRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVH
VNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWW
HCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENA
LEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVH
DVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVG
KPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSN
PVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVL
ASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKK
QFEYRNAGTSEPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNL
ASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIP
AEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNI
FQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGSGDTTSGGLGTTYS
KGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQ
LPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRM
SQSWEDVEEAVWGELNNYTGLT
Sequence Length: 
972
Sequence Checksum: 
2f17b37a872f232e40672568b0ec5f1a
View location in JBrowse: 
DCARv2_Chr5:37150691..37165418-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017397178.1, derives from mRNA, XM_017397178.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ACJ0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8528300.1}))

HSP 1 Score: 1389.79 bits (3596), Expect = 0.000e+0
Identity = 678/984 (68.90%), Postives = 795/984 (80.79%), Query Frame = 0
 
Query:    1 MEIDESSTA---PRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYK-PCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTS--EPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGS-GDTTSGGL-GTTYSKGELNL-----WRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGL 971
            ME++E   A   PRDRR DALGDLRVLPDET+C+IL+ L+PRDVARLSCVSSVMYILCNEEPLWM+LCLNN+N  LQYKGSWK+T LHQLQL NEY+ PC+K L FDGFNSL+LYRR YRCYTTL+GFSF+NGNVERK+DLSLEEFH  YD +KPVL+SGLA+TWSA H WT D+L+++YGD  F+ISQRSS+K ++KFRDYISY QIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQED+FDVL+RD+RPPFRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVPLGV VHVNE+DGDV++DTP+SLQWWLDFYPLLAD++KPIECTQLPGETI+VPSGWWHCVLNLETTVAVTQNFVNS+NFEFVCLDM+PGYRHKG+CRAGLLAL+  + E  K  A    E        T   KR ++ E  ++ N E A+ GA   +++ N EFSYDI+FLAMFLDKERDHYN+LWSSGN IGQRELR WLW LWV KPG RDLIWKGACLALNAGKWS C+G ICSFHEL FPSD E+LPVGTGSNPVYLVAD+VIK+YVE GLEASLH++GTELEFYSLLC+  S LKNHIPDVLASGI+  E GSY + PW+GKG+PD++  C+L  +N  ++VDFPFG+WSK+QFEYR AG S  E  +  G   +WP+I+TKRCKGK+ +EL D + WED +NLASFLGEQLRNLH++P P   D    +  +       N   ++ TD   IP EW+ F+ TL +K+KDV SRL  WGDPIP  LIE+V EYIP+DF  +LN  +   G  +VC+ C+WIH+DIMDDNI ME   V S S G+T   GL   +Y  G         WRP HILDF ++S+ DPICD+IP++LDVF+GD RLLK+FLESY+LPL+      E +   SKF R SYLAMCYCILH++NILGAIFS+WKELR+++SWE+VEE VWGELN+YTG 
Sbjct:    1 MEVEEGCEAQLVPRDRRPDALGDLRVLPDETICAILVHLTPRDVARLSCVSSVMYILCNEEPLWMSLCLNNINGPLQYKGSWKQTALHQLQLPNEYEEPCRKPLHFDGFNSLFLYRRFYRCYTTLDGFSFENGNVERKKDLSLEEFHLVYDGQKPVLLSGLADTWSARHTWTTDQLLLNYGDTAFKISQRSSQKITMKFRDYISYVQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDFFDVLDRDQRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVIVHVNEEDGDVNVDTPSSLQWWLDFYPLLADKDKPIECTQLPGETIFVPSGWWHCVLNLETTVAVTQNFVNSRNFEFVCLDMSPGYRHKGVCRAGLLALDGGSFEDTKSCA----EDCSSYSDLTRKEKRVRLCEPAEDSNYENAKNGASESYNLSNQEFSYDISFLAMFLDKERDHYNSLWSSGNCIGQRELRGWLWKLWVSKPGQRDLIWKGACLALNAGKWSECVGEICSFHELPFPSDGERLPVGTGSNPVYLVADHVIKLYVEGGLEASLHALGTELEFYSLLCKVNSPLKNHIPDVLASGILSLENGSYSIVPWDGKGVPDVIANCNLIPEN-CKEVDFPFGVWSKQQFEYRKAGMSIHESDNPGGSSRIWPFIITKRCKGKIFAELRDTLSWEDLLNLASFLGEQLRNLHILPLPSSNDSRFSDIKQKIGLPCGNGFMEAVTDKPCIPVEWEFFIKTLTRKKKDVCSRLTKWGDPIPNTLIEKVDEYIPDDFGKLLNTIEGEDGPHKVCKPCSWIHSDIMDDNIHMETCCVNSCSIGNTPDAGLMDNSYVNGYNGTGGGKSWRPGHILDFSDLSISDPICDVIPIHLDVFRGDPRLLKRFLESYRLPLVRRIPYLESVESGSKFGRLSYLAMCYCILHEENILGAIFSLWKELRVAKSWEEVEETVWGELNDYTGF 979
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ALR7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA57607.1}))

HSP 1 Score: 1389.79 bits (3596), Expect = 0.000e+0
Identity = 677/984 (68.80%), Postives = 801/984 (81.40%), Query Frame = 0
 
Query:    1 MEID---ESSTAPRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYK-PCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTS--EPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGS-GDTTSGGL-------GTTYSKGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTG 970
            ME++   E+   PRDRR +ALGDLRVLPDET+C+IL LLSPRDVARLSCVSSVMYILCNEEPLWM+LCL+N+N  LQYKGSWKKT L+QL L NEY+ PC K L FDGFNSL+LYRRLYRCYT+LNGFSFDNGN+ERK DLSLEEFHH YD +KPVL+SGLA+TW A   WT D+L+++YGD  F+ISQRSS+K +++FRDY+SY QIQHDEDPLYIFDDKFGEV P LLKDY+VPHLFQED+FDVL+RD+RPPFRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVPLGVTVHVN++DGDV+++TP+SLQWWLDFYPLLADEEKPIECTQLPGETI+VPSGWWHCVLNLETTVAVTQNFVNSKNFE+VCLDMAPGYRHKG+CRAGLLAL+E +LE  K+N L  EES L     T   KR ++ E  ++ N E A  G+    +  N EFSY+IN+LAMFLDKE+DHYN+LWSS NSIGQRELR WLW LWVGKPG RDLIWKGACLALNAGKWS C+G IC+FHEL FP+DDEKLPVGTGSNPVYLVADNVIK YVE GLEASLH++GTELEFYSLLC+  S LKNHIP VLASGI+  E G Y + PW+GKG+P+++  C+L +  I ++VDFPFG+WS+KQFEYR AG S  E     G   +WPYIVTKRCKGK+ ++L D + W D +NLASFLG+QLRNLHL+PFP L D       +  +    N   ++ TD   IPAEW+ F+ TL +K+KD+ SRL  WGDPIP  LIE+V EYIP+DFE +LN+F+   G+ +VCR C+WIH+DIMDDNI MEP  + S S  +T   GL       G   S GE + W PSHILDF ++S+GDP+CDLIP++LDVF+GD+RL+K+FLE+Y+LP +      E +   SKF R SYLAMCYCILH++NILGAIF +WKEL+M++SWE+VEE VWG+LN+YTG
Sbjct:    1 MEVEGSCEAQLGPRDRRPEALGDLRVLPDETICAILSLLSPRDVARLSCVSSVMYILCNEEPLWMSLCLDNVNGPLQYKGSWKKTALYQLHLPNEYEEPCIKPLHFDGFNSLFLYRRLYRCYTSLNGFSFDNGNLERK-DLSLEEFHHVYDGQKPVLLSGLADTWPARQTWTTDQLLLNYGDTAFKISQRSSRKITMRFRDYVSYMQIQHDEDPLYIFDDKFGEVTPCLLKDYNVPHLFQEDFFDVLDRDQRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNQEDGDVNVETPSSLQWWLDFYPLLADEEKPIECTQLPGETIFVPSGWWHCVLNLETTVAVTQNFVNSKNFEYVCLDMAPGYRHKGVCRAGLLALDEGSLEDAKKNRLCAEES-LSYSDLTRKEKRVRICEPAQDLNHENATNGSSESFNFRNQEFSYNINYLAMFLDKEKDHYNSLWSSSNSIGQRELRGWLWKLWVGKPGLRDLIWKGACLALNAGKWSECLGEICAFHELPFPTDDEKLPVGTGSNPVYLVADNVIKFYVEGGLEASLHALGTELEFYSLLCKINSPLKNHIPGVLASGILFLENGLYTIVPWDGKGVPEVIANCNL-IPEICKEVDFPFGVWSRKQFEYRKAGMSIYESDSSGGCSRIWPYIVTKRCKGKIFADLRDTLSWVDHLNLASFLGDQLRNLHLLPFPSLNDSTFSGIKQKIELPSGNGYMEAVTDKLRIPAEWEFFIRTLTRKKKDISSRLTKWGDPIPTNLIEKVDEYIPDDFEKLLNMFEDENGLRKVCRPCSWIHSDIMDDNIHMEPCRISSCSIANTPDAGLMDNGYVNGYNGSGGEKS-WHPSHILDFSDLSIGDPLCDLIPIHLDVFRGDTRLMKRFLENYKLPFVRRISHHESVESCSKFGRLSYLAMCYCILHEENILGAIFGLWKELKMAKSWEEVEETVWGDLNDYTG 980
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AP33 ((Uncharacterized protein {ECO:0000313|EMBL:MPA57606.1}))

HSP 1 Score: 1370.53 bits (3546), Expect = 0.000e+0
Identity = 669/981 (68.20%), Postives = 794/981 (80.94%), Query Frame = 0
 
Query:    1 MEIDESSTA---PRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYK-PCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTSEPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGS-GDTTSGGL-GTTYSKGELNL-----WRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTG 970
            ME++E   A   PRDRR DALGDLRVLPD+T+C+IL+ L+PRDVARLSCVSSVMYILCNEEPLWM+LCLNN++  LQYKGSWK+TTLHQL L NEY+ PC+K LQFDGFNSL+LYRRLYRCYTTL+GFSFDNGN+ERK+DLS EEFH  YD +KPVL+SGLA++WSA H WT D+L+++YG+  F+ISQRSS+  ++KFRDY+SY QIQHDEDPLYIFDDKFGEVAPGLLKDY+VPHLFQED+FD LERD+RPPFRWLIIGPERSGASWHVDPALTSAWNTLL G KRWALYPPGRVPLGVTVH++E+DGDV+++TP+SLQWWLDFYPLLAD++KPIECTQLPGETI+VPSGWWHCVLNLETTVA+TQNFVNS+NFEFVCLDM+PGYRHKG+CRAGLLAL+  + E  K  A    E  L     T    R ++ E  ++ N E A  GA   +++ N EFSYDINFLAMFLDKERDHYN+LWSSGN IGQRE R WLW LWVGKPG RDLIWKGACLALNA KWS C+G ICSFHEL  P DDE+LPVGTGSNPVYLVAD+VIK YVE+GLEA LH++GTELEFYSLLC+  SSLKNHIP VLASGI+  E GSY + PW+GKG+P+++  C+   +N  ++VDFPFG+WSK+Q E+R AG S      G   +WPYI+TKRCKGK+ +EL D + WED +NLASFLGEQLRNLHL+PFP L D       +  +    N   ++ TD   IPAEW+ F+ TL +K+KDV SRL  WGDPIP  LIE+V EYIP DFE  L++F+  KG+ +VC+  +WIH+DIMDDNI MEP  V S S G+T   GL    Y  G   +     WRPSHILDF ++S+GDPICDLIP++LDVF+GD  LLK+FLESY+LPL+      E + + SKF + SYLAMCYCILH+DN+LGAIFS+WKELRM++SW++VEE VWG+LNNYTG
Sbjct:    1 MEVEEGYEAQLVPRDRRPDALGDLRVLPDDTICAILVHLTPRDVARLSCVSSVMYILCNEEPLWMSLCLNNVDGPLQYKGSWKQTTLHQLHLPNEYEEPCRKPLQFDGFNSLFLYRRLYRCYTTLDGFSFDNGNLERKKDLSFEEFHLVYDGQKPVLLSGLADSWSARHTWTTDQLLLNYGETKFKISQRSSQNITMKFRDYVSYIQIQHDEDPLYIFDDKFGEVAPGLLKDYNVPHLFQEDFFDALERDQRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGCKRWALYPPGRVPLGVTVHISEEDGDVNVETPSSLQWWLDFYPLLADKDKPIECTQLPGETIFVPSGWWHCVLNLETTVAITQNFVNSRNFEFVCLDMSPGYRHKGVCRAGLLALDRGSFEDAKNCA----EDGLSYSDITRKENRVRICEPAEDSNHENANNGASKSYNLSNQEFSYDINFLAMFLDKERDHYNSLWSSGNCIGQREFRGWLWKLWVGKPGLRDLIWKGACLALNASKWSECVGEICSFHELPLPIDDERLPVGTGSNPVYLVADHVIKFYVEEGLEACLHALGTELEFYSLLCKVDSSLKNHIPGVLASGILYLENGSYTIVPWDGKGVPNVIANCNWIPEN-CKEVDFPFGVWSKQQIEFRKAGMSISDSSGGSSRIWPYIITKRCKGKIFAELRDILSWEDLLNLASFLGEQLRNLHLLPFPSLNDSTFSAIKQKIELPCGNGFMEAVTDKPCIPAEWEFFIRTLTRKKKDVSSRLTKWGDPIPSTLIEKVDEYIPNDFEKFLSMFEDEKGLLKVCKPFSWIHSDIMDDNIHMEPCWVNSCSIGNTPDAGLMDDGYVNGYNGIGGGKSWRPSHILDFSDLSIGDPICDLIPIHLDVFRGDPCLLKRFLESYKLPLVRRISHHESVERGSKFGQLSYLAMCYCILHEDNVLGAIFSLWKELRMAKSWDEVEETVWGDLNNYTG 976
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HR38 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5955320.1}))

HSP 1 Score: 1338.94 bits (3464), Expect = 0.000e+0
Identity = 655/982 (66.70%), Postives = 777/982 (79.12%), Query Frame = 0
 
Query:    1 MEIDESSTAPRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYK-PCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTS--EPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGSGDTTSGG--LGTTYSKG-----ELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLN-QDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGL 971
            +E  E+   P+DRR DALGDLRVLPDE LC++L+ L+PRDVARLSCVSSVMYILCNEEPLWM+LCL+N+N QLQYKGSWKKT L QL L +EY+  C   + FDGFNSL+L RR YRCYTTL GF+FD+GNVERK ++SLE+F  E+DAKKPVL+SGLA+TW A   WT D+L+++YGD  F+ISQRSS+K S+KF+DY+SY QIQHDEDPLYIFDDKFGEV PGLLKDYSVPHLFQED+FDVL+RDKRP FRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVPLGVTVHVNE+DGDV+++TP+SLQWWLDFYPLLA+E+KPIECTQLPGETI+VPSGWWHCVLNLETTVAVTQNFVNS NFEFVCLDMAPGY+HKG+CRAGLLAL E + E  K+  L  E+S L D  QT   KR K  E  +EPNSE A       H++ + EFSYDINFL MFLDK RDHYN+LWSS N IGQRE+REWLW LW+ KPG R+LIWKGACLALNA KWS C+  IC+FHEL FP+DDE+ PVG GSNPVYL+AD+VIK+YVEDGLE S +++GTELEFYSLLC+  S LKNHIP VLASGI+  E GSYK+ PW+GKG+P+++  C+L  +N S +VDFPFG+WSKK FE + AG S  E         +WPYIVTKRC GK  +EL + + WEDT+ LASFLGEQLRNLHL+PFP L    + +  E  +    +   ++ T+  SIPAEW  F+ TL +++KDV SRL  WGDPIP  LI++V EYIP+DF   LNIF+ GK    V + C+WIH+DIMDDNI MEP  V S   + TS    +   Y  G     E   WRPSHILDF ++S+GDPICDLIP++LDVF+GD  LLK+FLESY+LPL     Q E ++   SKF R S++AMCYCILH+DNILG IFS+ KELRM++SWE+VEE VWG+LNNY+G 
Sbjct:    3 VEYSETQCVPKDRRPDALGDLRVLPDEILCAMLVYLTPRDVARLSCVSSVMYILCNEEPLWMSLCLDNVNGQLQYKGSWKKTALDQLHLPSEYQETCINPMHFDGFNSLFLLRRHYRCYTTLAGFTFDSGNVERKNNISLEDFRQEFDAKKPVLLSGLADTWPARSTWTIDQLLLNYGDTEFKISQRSSRKISVKFKDYVSYMQIQHDEDPLYIFDDKFGEVVPGLLKDYSVPHLFQEDFFDVLDRDKRPAFRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGRVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLANEDKPIECTQLPGETIFVPSGWWHCVLNLETTVAVTQNFVNSANFEFVCLDMAPGYQHKGVCRAGLLALNEGSFEDSKKTTLSTEDS-LSDSDQTRKEKRIKFCEPVEEPNSENAVNSTSINHNLHDQEFSYDINFLEMFLDKGRDHYNSLWSSSNCIGQREMREWLWKLWIAKPGLRNLIWKGACLALNAEKWSECVREICTFHELPFPTDDERFPVGMGSNPVYLIADHVIKLYVEDGLEFSFNALGTELEFYSLLCKVDSPLKNHIPGVLASGILFIENGSYKIVPWDGKGVPNVIASCNLIPEN-SLEVDFPFGVWSKKNFEIKKAGMSINELISSGDGSRIWPYIVTKRCNGKTFAELRETLSWEDTLYLASFLGEQLRNLHLLPFPSLNASTLADAEEKMEYPCVSGSMEAVTNKLSIPAEWDFFIRTLTRRKKDVCSRLTKWGDPIPSFLIDKVDEYIPDDFPKFLNIFEDGK----VAKPCSWIHSDIMDDNIHMEPCCVSSCLTEHTSAADLMHNGYVNGKNGGAERTSWRPSHILDFSDLSIGDPICDLIPIHLDVFRGDPNLLKQFLESYRLPLARKISQHESVDGGGSKFGRLSFIAMCYCILHEDNILGTIFSLCKELRMAKSWEEVEETVWGDLNNYSGF 978
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q0C4 ((F-box protein {ECO:0000313|EMBL:PSR99866.1}))

HSP 1 Score: 1327.38 bits (3434), Expect = 0.000e+0
Identity = 646/983 (65.72%), Postives = 772/983 (78.54%), Query Frame = 0
 
Query:    1 MEIDESSTAPRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYK-PCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTSEPSHFRGHPS--VWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPL-CDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGSGDTT--SGGLGTTY------SKGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGL 971
            +E  ES  AP+DRR DALGDLRVLPDE LC++L+ L+PRDVARLSCVSSVMYI+CNEEPLWM+LCL+NLN QL+Y GSWKKT L QL L NEY+  C K + FDGFNSL+L RR YRCYTTL GFSFD+GNVER++DLSLE+F  E+D KKPVL+SGLA+TW A H WT D+L++ YGD  F+ISQ+S++K S+KF+DY+SY QIQHDEDPLYIFD+KFGEVAPGLL DY VPHLFQED+FD+L+R+KRP FRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVPLGVTVHVNE+DGDV+I+TP+SLQWWLDFYPLLADE+KPIECTQLPGETI+VPSGWWHCVLNLETTVAVTQNFVNS NFEFVCLDMAPGY+HKG+CRAGLLAL+E   E  K+  L  + S L +   T   KR K  E  +EPNS  A       H+V + EFSYDINFL MFLDK RDHYN+LWSS N IGQRE+REWLW LWV KPG R+LIWKGACLALNAGKWS C+  IC+FH+L FP+DDE+LPVG GSNPVYL++D+ IK+YVE GLEASLH++G+ELEFY++LC+  S LKNHIP VLASGI+  E GSYK++PW+GKG+P+++D C+L +     +VDFPFG+ SK+ FE+R AG              +WPYIVTKRCKGK  ++L D + WEDT+ LASFLGEQL NLHL+PFP L    F     E K      S+    TD  SIP EW  F+ TL +++KDV SRL  WGDPIP  LI++V EYIP+DF   LNIF+ GK    V + C+WIH+DIMDDNI MEPS V     + T  +  +  +Y        GE+  WRPSHILDF ++S+GDPICDLIP++LDVF+GD  LLK+FL+SY+LPL     Q   ++ DSKF R SY+ MCYCILH++NILGAIFSIW+ELR ++SWE+VE+ VWG+LN Y+G 
Sbjct:    3 IEYSESQCAPKDRRTDALGDLRVLPDEILCAVLVYLTPRDVARLSCVSSVMYIICNEEPLWMSLCLSNLNGQLKYTGSWKKTALDQLNLPNEYQETCIKPMHFDGFNSLFLLRRHYRCYTTLAGFSFDDGNVERRKDLSLEDFRREFDVKKPVLLSGLADTWPAKHTWTIDQLLLKYGDTAFKISQKSARKISMKFKDYVSYMQIQHDEDPLYIFDEKFGEVAPGLLNDYKVPHLFQEDYFDILDREKRPAFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEEDGDVNIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIFVPSGWWHCVLNLETTVAVTQNFVNSTNFEFVCLDMAPGYQHKGVCRAGLLALDEGRYEDAKKVTLSAKVS-LSNSDLTRKEKRIKFCEPVEEPNSGKAATWTSISHNVHDQEFSYDINFLEMFLDKGRDHYNSLWSSSNCIGQREMREWLWKLWVEKPGLRNLIWKGACLALNAGKWSECITEICTFHKLSFPTDDERLPVGMGSNPVYLISDHAIKLYVEGGLEASLHALGSELEFYNMLCKVDSPLKNHIPGVLASGILFIENGSYKIEPWDGKGVPNVIDSCNL-IRKKCLEVDFPFGVGSKRHFEFRKAGIDISESISSSECSRIWPYIVTKRCKGKTFADLRDTLSWEDTLRLASFLGEQLHNLHLLPFPSLNASAFPYSEEEIKYLCGNGSV----TDKLSIPTEWDFFIRTLTRRKKDVSSRLTKWGDPIPSFLIDKVDEYIPDDFAKFLNIFEDGK----VGKPCSWIHSDIMDDNIHMEPSCVSHCPTEHTLDADAMHNSYVNGYHDGGGEVTSWRPSHILDFSDLSIGDPICDLIPIHLDVFRGDPNLLKRFLDSYRLPLARKISQHVSVDSDSKFGRLSYITMCYCILHEENILGAIFSIWRELRTAKSWEEVEDTVWGDLNKYSGF 975
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6R7E8 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8056929.1}))

HSP 1 Score: 1286.55 bits (3328), Expect = 0.000e+0
Identity = 621/977 (63.56%), Postives = 754/977 (77.18%), Query Frame = 0
 
Query:    6 SSTAPRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEYK-PCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTS--EPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSV-------GSGSGDTTSGGLGTTYSKGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGLT 972
             +  PRDRR DALGDL+VLPDETLC+IL  L+PRD+ARL+CVSSVMYILCNEEPLWM+LC   LN  LQYKGSWKKT     Q LNEY+ PC+K L FDGF+SL+LYRRLYR +TTLNGFSFDNG VERK+DL+LEEF+H+YD KKP+L++GL +TW A H W  D+L+++YGD  FRISQRSS+K  +KF+DY+SY ++QHDEDPLYIFDDKFGEVAPGLLKDY+VPHLFQED+FDVLERD+RPPFRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWA YPPGRVPLG TVHVNE+DGDV+++TP+SLQWWLDFYPLLADE+KP+ECTQLPG+TI+VPSGWWHCVLNLETT+AVTQNFVNSKNFEF CLDMAPGYRHKG+CRAGLLALE+ + E   ++ ++ + +           KRA++ E G  PN E     A   +++    FSYDINFL+MFLDKE+DHY   WSSGN +GQRE+R+WL  LWVGKPG R+LIWKGACLALNA KW  C+  IC+FH L  P+DDE+LPVGTGSNPVYL+ + VIKI+VE GLEAS++ +GTELEFY+LLC+  S LKN+IPDVLASGI+  E GSYKV  W+GKG+PD++ + +L+ +N   D ++PFG+WSKKQ EYR A  S  E     G   +WPYI+ KRCKGK+ ++L DR+ WEDT++LASFLGEQLRNLHL+P PP       +     +    N   ++  +   IPAEW++F+ TL +K+K V SRL  WGDPIP  LIE+V EYIP+DF  +LN+ +   G+ +VC+ C+WIH+DIMDDNI ME   V          +G      +      G+   W PSHILDF ++S+GDPI DLIP+YLD+F+GD RLLK+FLESY+LP +     K       K  R SYLAMCYCILHD+NILGAIF IW ELR ++SWE+VE AVWGELNNY G T
Sbjct:    7 QALGPRDRRTDALGDLQVLPDETLCAILEYLTPRDLARLACVSSVMYILCNEEPLWMSLCFKRLNGPLQYKGSWKKTARLLEQPLNEYEEPCRKPLHFDGFSSLFLYRRLYRSHTTLNGFSFDNGTVERKKDLTLEEFYHQYDGKKPLLLTGLTDTWPARHTWMIDQLLLNYGDTNFRISQRSSQKILMKFKDYVSYMKLQHDEDPLYIFDDKFGEVAPGLLKDYNVPHLFQEDFFDVLERDQRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWAFYPPGRVPLGATVHVNEEDGDVNVETPSSLQWWLDFYPLLADEDKPVECTQLPGDTIFVPSGWWHCVLNLETTIAVTQNFVNSKNFEFACLDMAPGYRHKGVCRAGLLALEQGSFEDADDSLIYTDLA--------RKDKRARIQEPGDGPNHEKTTNSASRRYNMWKQGFSYDINFLSMFLDKEKDHYIHPWSSGNCMGQREMRDWLSKLWVGKPGSRELIWKGACLALNADKWLECLAEICAFHNLPSPTDDERLPVGTGSNPVYLMENTVIKIFVEGGLEASIYGLGTELEFYNLLCKVNSPLKNYIPDVLASGILYHENGSYKVVSWDGKGVPDVIAQSNLSPENCKVD-EYPFGVWSKKQLEYRKAAISIHESIGPAGCTRIWPYIIIKRCKGKIFAQLRDRLSWEDTLSLASFLGEQLRNLHLLPLPPFNHSIFSDIELKSQLPFTNGCMEAVLNNSKIPAEWEIFIRTLMRKKKGVSSRLSKWGDPIPNTLIEKVDEYIPDDFAKLLNVLEGENGLNKVCKPCSWIHSDIMDDNIYMESRLVSLCLSENAKDAGLEDDDSINGYDEGGKGKSWCPSHILDFSDLSLGDPIFDLIPIYLDIFRGDQRLLKQFLESYKLPFI-----KMPQEGGEKVGRLSYLAMCYCILHDENILGAIFDIWNELRTAKSWEEVELAVWGELNNYKGFT 969
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: E0CRN6 ((Uncharacterized protein {ECO:0000313|EMBL:CBI19190.3}))

HSP 1 Score: 1286.55 bits (3328), Expect = 0.000e+0
Identity = 626/978 (64.01%), Postives = 761/978 (77.81%), Query Frame = 0
 
Query:    2 EIDESST-APRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEY-KPCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTSEPSHFRGH--PSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSG----SGDTTSGGLGTTYSKGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGL 971
            EI E+ T   +DRR DALGDLR+LPDE + +IL     RDV+RL+CVSSVMYILCNEEPLWM+LCLNN+   LQYKGSWKKT L Q  + N Y +PC+K L FDGFNSL+LYRRLYRC+TTL+GF+FDNG  ER++DLSLE F HEYD KKPVL++GLA+TW A   WT D+L+++YGD  F+ISQRSS+K ++KF+DY+SY ++QHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQED+FDVL+RD+RPPFRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVP GVTVHVNE+DGDV+I+TPTSLQWWLDFYPLLADE+KPIECTQLPGETIYVPSGWWHCVLNLETT+AVTQNFVNSKNFEFVCLDMAPGY HKG+CRAG+LAL++ + E  K +A   ++  L     T   KR +  + GK+P+++ AR GA   +D+ N +F YDINFL++FLD+E+DHY++LWSS N IGQRE+REWL  LWVGKPG R+LIWKGACLALNAGKW      IC+FH L  P+DDE+LPVGTGSNPVYL++D+V+K++VE GLEAS+HS+G ELEFYSLLC+  S LK+HIPDVLASGI+  + GSY + PW+GKG+PD++ +C+L       D  F FG+WSKK FEY+ AG S            +WPYI+TKRCKGK+ + L D +  +D +NLASFLGEQL NLH++P P L        N+    +  N      +D   IPAEW++F+ TL +KRKDV SRL  WGDPIP  L+E+V EY+P DF  +LNIFQ   G  +V + C WIH+DIMDDNI MEP  + S     + D+   G G+     E   WRP HILDF ++S+GDPI DLIP++LDVF+GD  LLK+FLESY+LPL+    Q   L  D KF R SY AMCYCILH++N+LGAIFS+WKEL++++SWE+VEE VWGELNNY G 
Sbjct:    3 EISETHTRGLKDRRADALGDLRLLPDEIILAILASFGARDVSRLACVSSVMYILCNEEPLWMSLCLNNVKDHLQYKGSWKKTALLQEHMPNGYIEPCEKPLHFDGFNSLFLYRRLYRCHTTLDGFTFDNGKAERRKDLSLEAFCHEYDGKKPVLLAGLADTWPARSTWTTDQLLMNYGDTAFKISQRSSRKITMKFKDYVSYMKVQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDFFDVLDRDQRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPTGVTVHVNEEDGDVNIETPTSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSKNFEFVCLDMAPGYHHKGVCRAGMLALDKGSFENGKIDAF-CDKDGLNHPDLTRKEKRVRTYQPGKDPDNQSARNGACKSYDLWNQDFYYDINFLSVFLDQEKDHYSSLWSSSNCIGQREMREWLCKLWVGKPGMRELIWKGACLALNAGKWLERTAQICTFHGLPPPTDDERLPVGTGSNPVYLISDSVVKLFVEGGLEASIHSLGAELEFYSLLCKVNSPLKDHIPDVLASGILFLDNGSYTIVPWDGKGVPDVIAKCNLVPAKCMED-GFSFGVWSKKDFEYKKAGASTYESISSAECAGIWPYIITKRCKGKIFARLRDTLPRDDVLNLASFLGEQLHNLHILPHPSL--------NDSIHLSLDNGFMDEISDKIGIPAEWEIFIRTLARKRKDVSSRLTKWGDPIPSSLMEKVDEYLPNDFAKLLNIFQDENGQDKVNKPCCWIHSDIMDDNIHMEPCRISSCLTTPATDSCLTGNGSADGCTEEVSWRPGHILDFSDLSIGDPIWDLIPIHLDVFRGDPCLLKQFLESYKLPLVRRTSQNG-LEHDDKFRRLSYHAMCYCILHEENVLGAIFSLWKELKVAKSWEEVEETVWGELNNYDGF 969
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1R3JI52 ((Uncharacterized protein {ECO:0000313|EMBL:OMO94483.1}))

HSP 1 Score: 1276.15 bits (3301), Expect = 0.000e+0
Identity = 617/977 (63.15%), Postives = 766/977 (78.40%), Query Frame = 0
 
Query:    4 DESSTAP-RDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEY-KPCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTSE--PSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSI-FKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGSGD---TTSGGLGTTYSKGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGLT 972
            D+S   P +DRR DALG+L+ LPDE +C+IL  L+PRD+ARL+CVSSVMYI CNEEPLWM+LCL  +N  L+YKGSWKKT LH   L NEY + C+K LQFDGF+SL+LYRRLYRC+TTL+ FSFD+GNVE+++DLS E+F  EYD  KPVL+SGLA+TW A + WT D+L++ YGD  F+ SQR+  K S+KF+DYI+Y+++QHDEDPLYIFD+KFGE  PGLLKDY+VP LFQED+FDVL++D RPPFRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVP+GVTVHVNE+DGDV+IDTP+SLQWWLDFYPLLADE+KPIECTQLPGETI+VPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGY HKG+CRAGLLAL+E  LE +++N  + +E+       T   KRA+ S+  +  N +    G    +++   +F+YDINFLA FLD+ERDHY + WSSGN IG RE+R+WL  LWVGKPG RDLIWKGACLALNA KW  C+G IC FH L FP++DEKLPVGTGSNPVY++ + V+KI+VEDGLE+S+H +GTELEFYS LCE  S LKNHIP+VLASGI+  E GSYK+  W+GK +PD++ +C+L     + DV FPFG+W KK FEY+ AG+ E  P    G  ++WPY++TKRC GK+ ++L D + WED +NL+SFLGEQLR+LHL+P+P   +  I +  +  +    N +  + E+D    PAEWK F  TL++K+KDV SRL  WGDPIPK+LIE+V EY+P+DF  +L++++   G+  V + C+WIH+DIMDDNI MEP S+    G    T +G +    + GE   WRP+ ILDF ++S+GDPI D+IP+YLDVF+GDSRLLK+FLESY+LPLM    +  L+  D KF R SY  MCYCILHD+NILGAIFSIW ELR ++SWE+VE+AVWGELNNY G  
Sbjct:    5 DQSHAFPLKDRRADALGNLKSLPDEIICNILDCLTPRDIARLACVSSVMYIFCNEEPLWMSLCLKKINGSLEYKGSWKKTALHLENLPNEYVEDCRKPLQFDGFSSLFLYRRLYRCHTTLDSFSFDDGNVEKQKDLSAEQFSREYDGVKPVLLSGLADTWPARNTWTIDQLLLKYGDTAFKNSQRTPGKLSMKFKDYITYTKLQHDEDPLYIFDEKFGEKEPGLLKDYNVPQLFQEDFFDVLDKDSRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPMGVTVHVNEEDGDVNIDTPSSLQWWLDFYPLLADEDKPIECTQLPGETIFVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYCHKGVCRAGLLALDEGVLENIEKNMSNDKENFSYS-DLTRKEKRARKSQESE--NDKGISDGVSKSYNLWKQDFAYDINFLAKFLDRERDHYTSPWSSGNCIGPREMRDWLCKLWVGKPGMRDLIWKGACLALNADKWLECLGKICFFHNLPFPNEDEKLPVGTGSNPVYVMDEYVVKIFVEDGLESSIHGLGTELEFYSKLCEVRSPLKNHIPNVLASGILHLENGSYKIDTWDGKDVPDVIRKCNLGPQTGTNDV-FPFGLWGKKLFEYKKAGSPECVPQSTAGSTNIWPYLITKRCNGKIFAQLRDTLSWEDVLNLSSFLGEQLRHLHLLPYPSFSNSTISDVEQNGELPFANGMDIEYESD---FPAEWKFFARTLSRKKKDVSSRLNKWGDPIPKMLIEKVDEYLPDDFLKLLSVYEVN-GMKRVSKPCSWIHSDIMDDNIYMEPCSISCSDGVAPLTDNGSINGHNNGGEGKSWRPNFILDFSDLSIGDPIYDVIPIYLDVFRGDSRLLKRFLESYKLPLMRKTSEHGLMTGDDKFARLSYHTMCYCILHDENILGAIFSIWTELRTAESWEEVEQAVWGELNNYVGFA 973
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1R3K2F0 ((Uncharacterized protein {ECO:0000313|EMBL:OMP01257.1}))

HSP 1 Score: 1273.07 bits (3293), Expect = 0.000e+0
Identity = 618/975 (63.38%), Postives = 760/975 (77.95%), Query Frame = 0
 
Query:    4 DESSTAP-RDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNEY-KPCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESILRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTSE--PSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGSG--DTTSGGLGTTYSKGELNLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGLT 972
            D+S   P +DRR DALG+L+ LPDE +C+IL  L+PRD+ARL+CVSSVMYI CNEEPLWM+LCL  +N  L+YKGSWKKTTLH   L NEY + C+K LQFDGF+SL+LYRRLYRC+TTL+ FSFD+GNVER +DLS E+F  EYD  KPVL+SGLA+TW A   WT D+L++ YGD  F+ISQR+  K S+KF+DYI+Y+++QHDEDPLYIFD+KFGE APGLLKDY+VP LFQED+FDVL++D RPPFRWLIIGPERSGASWHVDPALTSAWNTLL GRKRWALYPPGRVP+GVTVHVNE DGDV+IDTP+SLQWWLDFYPLLADE+KPIECTQLPGETI+VPSGWWHCVLNLETTVAVTQNFVNSKN EFVCLDMAPGY HKG+CRAGLLAL+E  LE +++N  + EE+       T   KRA+ S+  +  N E    G    +++   +F+YDINFLA F+D+ERDHY + WSSGN IG RE+R+WL  LW+GKPG R+LIWKGACLALNA KW  C+G IC FH L FP++DEKLPVGTGSNPVY++ + V+KI+VEDGLE+S+H +GTELEFYS LCE  S LKNHIP+VLASGI+  E GSYK+  W+GK +PD++ +C+L     + DV FPFG+W KK FEY+ AG+ E  P    G  ++WPY++TKRCKGK+ ++L D + WED +NLASFLGEQLR+LHL+P+P   +  I +  +  +    N +      G   PAEWK F+ TL+ K+KDV SRL  WGDPIPK+LI +V EY+P+DF  +L+I++   G+  V + C+WIH+DIMDDNI MEP S+    G    T  G    ++ GE   WRP+ ILDF ++S+GDPI D+IP+YLDVF+GDS LLK+FLESY+LPLM    +  L+  D KF R SY  MCYCILHD+NILGAIFSIW EL+ ++SWE+VE+AVWGELNNY G  
Sbjct:    5 DQSHAFPLKDRRADALGNLKSLPDEIICNILDYLTPRDIARLACVSSVMYIFCNEEPLWMSLCLKKVNGPLEYKGSWKKTTLHLENLPNEYVEYCRKPLQFDGFSSLFLYRRLYRCHTTLDSFSFDDGNVERPKDLSAEQFSCEYDGVKPVLLSGLADTWPARSTWTIDQLLLKYGDTAFKISQRTPGKLSMKFKDYITYTKLQHDEDPLYIFDEKFGEKAPGLLKDYNVPQLFQEDFFDVLDKDSRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPMGVTVHVNEGDGDVNIDTPSSLQWWLDFYPLLADEDKPIECTQLPGETIFVPSGWWHCVLNLETTVAVTQNFVNSKNLEFVCLDMAPGYCHKGVCRAGLLALDEGGLENIEKNMSNDEENFSYS-DLTRKEKRARKSQESE--NDEGNSDGVSKSYNLWKQDFAYDINFLATFIDRERDHYTSPWSSGNCIGPREMRDWLSKLWLGKPGMRELIWKGACLALNADKWLECLGKICFFHNLPFPNEDEKLPVGTGSNPVYVMDEYVVKIFVEDGLESSIHGLGTELEFYSKLCEVNSPLKNHIPNVLASGILHLENGSYKIDSWDGKDVPDVIRKCNLGPQRGTGDV-FPFGLWGKKLFEYKKAGSPECVPHSSAGSTNIWPYLITKRCKGKIFAQLRDTLSWEDVLNLASFLGEQLRHLHLLPYPSFSNSTISDVEQNGELPFANGM--DAEYGSDFPAEWKFFVRTLSLKKKDVSSRLNKWGDPIPKMLIAKVDEYLPDDFLKLLSIYEV-NGMKRVSKPCSWIHSDIMDDNIYMEPCSISCSDGVAPLTDNGSVNGHNNGEGKSWRPNFILDFSDLSIGDPIYDVIPIYLDVFRGDSCLLKRFLESYKLPLMRKTSEHGLMTGDDKFARLSYHTMCYCILHDENILGAIFSIWTELKTAESWEEVEQAVWGELNNYVGFA 972
[Close]
BLAST of XM_017397178.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A833X9M6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5456145.1}) (Fragment))

HSP 1 Score: 1270.37 bits (3286), Expect = 0.000e+0
Identity = 617/973 (63.41%), Postives = 753/973 (77.39%), Query Frame = 0
 
Query:   10 PRDRRIDALGDLRVLPDETLCSILLLLSPRDVARLSCVSSVMYILCNEEPLWMALCLNNLNLQLQYKGSWKKTTLHQLQLLNE-YKPCKKALQFDGFNSLYLYRRLYRCYTTLNGFSFDNGNVERKRDLSLEEFHHEYDAKKPVLISGLANTWSATHAWTPDRLMVDYGDKVFRISQRSSKKASIKFRDYISYSQIQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFQEDWFDVLERDKRPPFRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGRVPLGVTVHVNEDDGDVSIDTPTSLQWWLDFYPLLADEEKPIECTQLPGETIYVPSGWWHCVLNLETTVAVTQNFVNSKNFEFVCLDMAPGYRHKGLCRAGLLALEENALEVVKENALHVEESI-LRDVRQTSNGKRAKVSESGKEPNSEIARRGAINVHDVCNLEFSYDINFLAMFLDKERDHYNALWSSGNSIGQRELREWLWTLWVGKPGHRDLIWKGACLALNAGKWSACMGAICSFHELQFPSDDEKLPVGTGSNPVYLVADNVIKIYVEDGLEASLHSIGTELEFYSLLCEYGSSLKNHIPDVLASGIVIFERGSYKVKPWNGKGLPDIMDECDLNLDNISRDVDFPFGIWSKKQFEYRNAGTS--EPSHFRGHPSVWPYIVTKRCKGKLLSELADRILWEDTVNLASFLGEQLRNLHLMPFPPLCDLFIRENNEYKKDAHYNSIFKSETDGGSIPAEWKVFLGTLNKKRKDVVSRLFNWGDPIPKLLIERVQEYIPEDFENILNIFQCGKGVPEVCRTCTWIHADIMDDNIIMEPSSVGSGSGDTTSGGLGTT------YSKGEL-NLWRPSHILDFGNMSVGDPICDLIPLYLDVFKGDSRLLKKFLESYQLPLMSDAGQKELLNQDSKFYRTSYLAMCYCILHDDNILGAIFSIWKELRMSQSWEDVEEAVWGELNNYTGL 971
            PRDRR+DALGDLRVLPDET+C+IL  L+PRD+ARL+CVSSVMYILCNEEPLWM LCL   N  LQY+GSWKKT LH   L NE  +PC+K L FDGFNSL+LYRRLYR +T+L GFSFDNG VERK+DLS+EEF+H+YD KKPVL++GLA++W A   WT D+ ++ YGD  FRISQ+SS+K  IKF+DY+SY ++QHDEDP+YIFDDKFGEVAPGLLKDYSVPHLFQED+FDVL+RD+RPPFRWLI+GPERSGASWH+DPALTSAWNTLL GRKRWALYPPGRVPLGVTVHVNE+DGDV+++TP+SLQWWLD YPLLADE+KP ECTQLPGETI+VPSGWWHCVLNLETT+AVTQNFVNS NFEF CLDMAPGYRHKG+CRAGLLAL+E + E   EN  + ++     D+  T   KR +V + G +P+ E    GA   +++    FSYDINFL+MFLDK+RDHYN+ WSSGN +GQRE+REWL  LWVG PG R+LIWKGACLALNA KW  C+  IC+FH L  P+DDE+LPVGTGSNPVYL+ D+V+KI+VE GLEAS++ +GTELEFY+L+ +  S LK HIPDVLASGI+  E GSY V PW+GKG+PD++ + +L  +    D  + FG+WSK+QFEYR A TS  E     G   +WPYI+TKRCKGK+ ++L +R+ WEDT++LASFLGEQLR LHL+P PP   L   +  +  +  + NS  +      + PAEW++F+ TL +K+KDV SRL  WGDPIP  LIE+V EYI +DF  +L+I +   GV +V   C+WIH+DIMDDNI ME  SV   SG++     G        Y  G + + W PSHILDF ++S GDPI DLIP+YLD+F+GD  LLK+FL SY+LPL      + +   D K  R SYL MCYCILH++NILGAIF +WKELR ++SWE+VE AVWGELN Y G 
Sbjct:   27 PRDRRLDALGDLRVLPDETICAILEYLTPRDIARLACVSSVMYILCNEEPLWMILCLKRPNGSLQYRGSWKKTALHLESLPNECEEPCRKPLHFDGFNSLFLYRRLYRSHTSLYGFSFDNGTVERKKDLSIEEFYHQYDGKKPVLLTGLADSWPARCTWTTDQFLLKYGDTTFRISQKSSQKILIKFKDYVSYMKLQHDEDPIYIFDDKFGEVAPGLLKDYSVPHLFQEDFFDVLDRDQRPPFRWLIVGPERSGASWHIDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEEDGDVNVETPSSLQWWLDIYPLLADEDKPFECTQLPGETIFVPSGWWHCVLNLETTIAVTQNFVNSTNFEFACLDMAPGYRHKGVCRAGLLALDEGSFEDADENMCYNDDDFSCSDL--TRKEKRVRVLKPGDDPSKERTTNGASKRYNLWKQGFSYDINFLSMFLDKDRDHYNSPWSSGNCMGQREMREWLSKLWVGNPGKRELIWKGACLALNADKWLECLAEICTFHNLPSPADDERLPVGTGSNPVYLIGDSVVKIFVEGGLEASMYGLGTELEFYNLVRKVNSHLKKHIPDVLASGILYLENGSYTVVPWDGKGVPDVIAKSNLIPEKCELD-GYAFGLWSKQQFEYRKAATSIHESISSAGCMMIWPYIITKRCKGKIFAQLRERLSWEDTLSLASFLGEQLRQLHLLPLPPFNYLIFPDIGKDLELTYTNSCMEVVPSKSNAPAEWEIFVRTLIRKKKDVTSRLSKWGDPIPNTLIEKVDEYILDDFSKLLDINEGKNGVNKVGNPCSWIHSDIMDDNIHMESRSVPLCSGESAKDAGGVDDGSKNGYDDGRMGDSWSPSHILDFSDLSSGDPILDLIPIYLDIFRGDQSLLKQFLNSYKLPLRRMPLHESVEGGD-KLGRLSYLVMCYCILHEENILGAIFGLWKELRTAKSWEEVELAVWGELNTYDGF 995
Match NameStatsDescription
A0A5J5ACJ0E-Value: 0.000e+0, PID: 68.90(Uncharacterized protein {ECO:0000313|EMBL:KAA8528... [more]
A0A5B7ALR7E-Value: 0.000e+0, PID: 68.80(Uncharacterized protein {ECO:0000313|EMBL:MPA5760... [more]
A0A5B7AP33E-Value: 0.000e+0, PID: 68.20(Uncharacterized protein {ECO:0000313|EMBL:MPA5760... [more]
A0A7J7HR38E-Value: 0.000e+0, PID: 66.70(Uncharacterized protein {ECO:0000313|EMBL:KAF5955... [more]
A0A2R6Q0C4E-Value: 0.000e+0, PID: 65.72(F-box protein {ECO:0000313|EMBL:PSR99866.1})[more]
A0A5N6R7E8E-Value: 0.000e+0, PID: 63.56(Uncharacterized protein {ECO:0000313|EMBL:KAE8056... [more]
E0CRN6E-Value: 0.000e+0, PID: 64.01(Uncharacterized protein {ECO:0000313|EMBL:CBI1919... [more]
A0A1R3JI52E-Value: 0.000e+0, PID: 63.15(Uncharacterized protein {ECO:0000313|EMBL:OMO9448... [more]
A0A1R3K2F0E-Value: 0.000e+0, PID: 63.38(Uncharacterized protein {ECO:0000313|EMBL:OMP0125... [more]
A0A833X9M6E-Value: 0.000e+0, PID: 63.41(Uncharacterized protein {ECO:0000313|EMBL:KAF5456... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.