XM_017402841.1

Resource Type: 
Polypeptide
Name: 
XM_017402841.1
Identifier: 
XM_017402841.1-protein
Sequence: 
MGDASFPPNNNMLYTSPDPVMDLDLDELLFDGCWLEANDGSEFFNQSPPP
FDPSFLWSSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQPPNQIQG
LGNDMLTSTSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEY
FKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISV
KYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYD
VRGTLAVPVFEQGTCLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSE
VASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEG
CRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFM
SNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLE
FFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKA
VVPSADRLGKQEIAEVENSAKSSHEVSFRTSSNMEMQESKPRELTESASS
PSQYQQISADGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDML
RQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQ
GVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASKPIGNSSQNEG
SALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCN
PGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESPSRLPND
IGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRT
GFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLG
SSYGSSQL
Sequence Length: 
908
Sequence Checksum: 
a4eccf7615962b12994a3d0bb0e624ec
View location in JBrowse: 
DCARv2_Chr6:3018644..3022511+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402841.1, derives from mRNA, XM_017402841.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BEM2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA66111.1}))

HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 566/937 (60.41%), Postives = 672/937 (71.72%), Query Frame = 0
 
Query:    1 MGDASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSPPPF----DPSFLWSSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQPPNQIQGL-------GNDMLTST---SHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQG--TCLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEIAEVE--NSAKSSHEVSFRTSSNMEMQES----------KPRE-LTESASSPSQYQQISA-DGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASKPIGNSSQNEGSALSPE--------AVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESPSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQH 898
            M D+ FPPN    Y S    MD D +DELL DGCWLE  DGSEF + SPP F    DPSF+W ++E+ N + +     KDS+EERQ SS   NLSIS+   Q             DM+  T   +   NY VE S+L    WIGPR   G + SV++R++RAL YFK+STRD DVL+Q+WVP++R GRR L+T  QPFSLD N PRLANYR ISV YQF AE DSKE+ G+P RVFMGKVPEWTPDVRF++ +EY RV HA+QYDVRGTLAVPVFEQG  +CLGVIE+V T+QKINY  ELESV +AL+AV+L  SEV+ST S+K C  SYQ+ALPEI+EVLR  CET+RLPLAQTW+PC+QQGK GCRHSDEN + CVST+DSACY+A+P I+GFHEACSEHHLL+GQGV G+AFM+NQP FSPDVTS SKTEYPLSHHARMFGL AAVAIRLRSIYTGT+DFVLEFFLP++C DPE+QK +L  LSI+IQKVC SLR++TD EL EE ++   + +VPS      +    ++  +S +SS EVS  T S+ME+QES          KPRE LTE +S   Q +  S+    + F+ D    G GS+S + KTGE+RR K +K ITL +L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSLQK+Q VIDSVQ ASG FQI+SFYSNFPELASPN S    L+ SKP G   Q   S++ P+          ASKSP SSCSQSS SS C SSG Q  PC    LN++  V  N G+G+LKR  S   LHA T   PK+L RSQS+K+L   P++ES   L  + GE   E DS  RVKVTYGEEKIRFRM N   + DL+ EI +RF IDD  GFHLKY+DDDSE VLLTCD DLEEC +VC+ + S TIKL L     QH
Sbjct:    1 MDDSIFPPNTMSPYYS---AMDFDYMDELLLDGCWLETTDGSEFLHHSPPTFSALHDPSFMWPNLEDNNEELSANPSQKDSREERQISSLAKNLSISESQGQNHAKTQSFSQEDQDMINVTGCSTQSVNYLVEDSELSRRWWIGPRSNSGPSSSVIERLIRALGYFKASTRDKDVLIQIWVPVNRDGRRFLTTNDQPFSLDLNCPRLANYRDISVNYQFPAEEDSKEIVGLPGRVFMGKVPEWTPDVRFFRSDEYLRVGHARQYDVRGTLAVPVFEQGCRSCLGVIEVVMTTQKINYHAELESVYKALEAVNLGSSEVSSTQSIKACYESYQAALPEILEVLRSACETHRLPLAQTWVPCIQQGKGGCRHSDENYVYCVSTVDSACYVADPHIQGFHEACSEHHLLKGQGVAGRAFMTNQPCFSPDVTSFSKTEYPLSHHARMFGLRAAVAIRLRSIYTGTADFVLEFFLPMDCGDPEEQKKMLTLLSIIIQKVCQSLRVITDKELEEENVLPVSEVIVPSDGSPCNKTTQNMQYTHSERSSQEVSSWTVSHMEVQESGNDVQLFQKEKPREVLTEKSSKFRQCENDSSLRASIAFDGDCSTFGEGSFSGMAKTGERRRTKAEKTITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQSASGAFQIESFYSNFPELASPNLSGTSPLSNSKPDG---QLRPSSMLPDDGTFSLQGGAASKSPSSSCSQSSCSSQCCSSGMQRHPCT---LNDDPIVKENCGDGVLKRVRSDAELHA-TSGGPKILPRSQSHKSLTEHPKSESLPPLLKNSGEKSQERDS-QRVKVTYGEEKIRFRMQNGWGHRDLVQEIARRFSIDDTRGFHLKYVDDDSELVLLTCDADLEECIDVCQLSGSHTIKLFLLPISQQH 926
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B435 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8537408.1}))

HSP 1 Score: 983.786 bits (2542), Expect = 0.000e+0
Identity = 544/929 (58.56%), Postives = 653/929 (70.29%), Query Frame = 0
 
Query:    1 MGDASFPPNNNMLYTSPDPVMDL-DLDELLFDGCWLEANDGSEFFNQSPPPF----DPSFLWSSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQP----PNQIQGLGNDMLT---STSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQG--TCLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEIAEVE--NSAKSSHEVSFRTSSNMEMQES----------KPRE-LTESASSPSQYQQISA-DGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASKPIGNSSQN----------EGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESPSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSL 891
            M D  FPPN  M  T P+  MD  D+DEL  DGCWLE   GSEF + SPP F    DPSF+W ++E    +   +S  KDSQEE Q SS   N SIS+     P + Q    +M+     +S   ++ V+GS+L    WIGP    G + SV++R++RAL Y K+STRD +VL+QLWVP++RGGRR L+T  QPFSLD + PRLA+YR ISV YQF+AE DSKE+ G+P RVFMGKVPEWTPDVRF++ +EY RV HAQQYDVRGTLA+PVFEQG  +CLGVIE+V T+QKINY+ ELESV +AL+AVDLRGSE +S  +MK CN S+Q+ LPEI+EVLR  CET+RLPLAQTW+PC+QQ   GCRHSDEN + CVST+DSACY+A+P I+GFHEACSEHHLL+GQG+ G+AFM+NQP FS DVTS SKTEYPLSHHAR+FGLCAAVAIRLRSIYT T+DFVLEFFLP+ CRDPE+QK +L +LSI+IQKVC SLR++TD EL EE +    + +VPS D    +    ++  +S + S EVS+ T S+ME+QES          KP E LTE +S     +  S     +    D   SG GS+S +GKTG +RR K +K ITL +LRQYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKI+KVGHSLQK+Q VIDSVQ ASG FQ  SFYSNFPELASPN      L  + P  N   N          +GS  S +  ASKSP SSCSQSS+SS C SSG Q  P     L ++  V  N G  +LKR  S   LHA T   PK+L RSQS+K+L   P+ ES   LP        E DS  RVKVTY EE IRFRM N   Y+DL+ +I +RF IDD  GF LKYLDDDSEWVLLTCD DLEEC +VC+ + S TIKLSL
Sbjct:    1 MDDGIFPPNT-MSGTPPNSAMDFNDIDELFLDGCWLETTGGSEFLHHSPPTFGSLFDPSFMWPTLEPDTEELTVSSSQKDSQEEGQISSLAKNQSISETREWNPAKTQSFSQEMINVAGCSSQSVSFLVDGSELSRRWWIGPSSNSGPSSSVIERLIRALGYIKASTRDKEVLIQLWVPVNRGGRRFLTTNDQPFSLDLHCPRLASYRDISVNYQFAAEEDSKEIVGLPGRVFMGKVPEWTPDVRFFRSDEYARVGHAQQYDVRGTLALPVFEQGCRSCLGVIEVVMTTQKINYRAELESVYKALEAVDLRGSEDSSIQNMKACNESFQAVLPEILEVLRSACETHRLPLAQTWVPCIQQSNGGCRHSDENYVYCVSTVDSACYVADPHIQGFHEACSEHHLLKGQGLAGRAFMTNQPCFSRDVTSFSKTEYPLSHHARVFGLCAAVAIRLRSIYTVTTDFVLEFFLPMGCRDPEEQKKMLTSLSIIIQKVCQSLRVITDKELEEENIFTVSEVIVPSDDGPSNKNTQNIQYTHSERFSQEVSW-TVSHMEVQESGNVTQLFQKEKPSEVLTEKSSEVRHCENDSCLRDSIASGGDCSTSGEGSFSGMGKTGARRRTKAEKTITLQILRQYFAGSLKDAAKSIGVCPTTLKRICRQHGINRWPSRKIQKVGHSLQKLQLVIDSVQSASGAFQNDSFYSNFPELASPN------LPGTSPFSNPKPNVQLRSSSTLPDGSTFSRQGTASKSPSSSCSQSSSSSQCCSSGMQQHP---YMLKDDPMVKENSGNVVLKRVRSDAELHA-TSGGPKLLPRSQSHKSLTEHPKFESLPPLPKRSSGKSQERDS-QRVKVTYREEIIRFRMQNGWVYEDLVQKIARRFSIDDTRGFRLKYLDDDSEWVLLTCDADLEECVDVCKLSGSHTIKLSL 916
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IGZ9 ((Protein nlp4 {ECO:0000313|EMBL:OIT03946.1}))

HSP 1 Score: 953.355 bits (2463), Expect = 0.000e+0
Identity = 522/926 (56.37%), Postives = 655/926 (70.73%), Query Frame = 0
 
Query:    3 DASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSPP----PFDPSFLW-SSMENYNGDFNWTSVP-KDSQEERQRSSYPGNLSISQPPNQIQGLGNDMLTSTSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQGT--CLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEI-AEVENSAKSSHEVSFRTSSNM--EMQESKPRELTESASSPSQYQQISADGH---VTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASK----PIGNSSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPG-EGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTES--PSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            D S  P+N +L    D  MDLD +D LL +GCWLE  DG+EF   SP     PFD SF+W ++++  N +FN   +P KDSQ+E+Q   +  N+             N+ + ++    ++ VE  +L    W GP+     + SVMDR++ AL + +  +RD D+LLQLWVPI+R GR VLST  QPF LD N PRLANYR +SVKYQF A  DSKE+ G+P RVF  KVPEW+PDVRF++ EEY RV HAQQYDVRGTLAVPVFEQG+  CLGVIE+V T+QKI Y+PELESVCEALKAV+LR SEV++T + K+C+ SYQ+ALPEI+EVL+  CET+ LPLAQTW+PCVQQGK GCRHS+EN+I+CVST DSACYIA+P +RGFHEACSEHHLL+GQGVVG+AFM+NQP FS D+TS SKTEYPLSHHA+MFGL AAVAIRLRSI TG+ DFVLEFFLP +CR+PE+ + +L +LSI+IQ VC +LR+VTD EL EE +   G+A  PS  R  K+      E ++ +S +  F+ SS +    Q+ KP E+      P +++  +  G+      N++ CASG G  S  GK G++RR K +K ITL++L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSLQKIQ VIDSVQGASG  QI+SFYSNFPELASPN S+      SK    P   ++Q EG  +SP A ASKSP SSCS+SS+SS C SSGT+ Q   L+   N+D +      +  +KR  S   LH S+  + K+L RSQS+  +   P++ES    + P    E  P      RVKVT+GEEKIRFRM N+  Y +LL EIT+RF +DD +G  LKY+DDDSEWVLLTCD DLEEC +VC S+ +Q IKL L ++   H+GSS+GSS
Sbjct:    2 DESVIPSNPLLTNQSDYFMDLDYMDGLLLEGCWLETTDGNEFLQNSPATFNAPFDSSFMWPNTIDTNNVEFN--GIPSKDSQQEKQIQPFGENV-------------NNAMCTSGQSESHFVEAPELNRRWWFGPKA----SSSVMDRLIWALGHIRDCSRDKDILLQLWVPINRDGRHVLSTTDQPFLLDLNCPRLANYRQVSVKYQFPANEDSKEIVGLPGRVFADKVPEWSPDVRFFRSEEYPRVEHAQQYDVRGTLAVPVFEQGSRNCLGVIEVVMTTQKIKYRPELESVCEALKAVNLRTSEVSTTQNAKVCDLSYQAALPEILEVLKSACETHGLPLAQTWVPCVQQGKGGCRHSEENLIHCVSTEDSACYIADPHVRGFHEACSEHHLLKGQGVVGRAFMTNQPCFSADLTSYSKTEYPLSHHAQMFGLQAAVAIRLRSISTGSCDFVLEFFLPSDCRNPEEHRKMLTSLSIIIQNVCRTLRVVTDKELQEEAV-SIGEAANPSFIRSNKEHTETSQERTSWTSCDAEFQESSTVVSAFQDEKPDEMLR--KEPVEFRHHNDSGYGMDFALNENHCASGEG-VSRNGKKGDRRRTKAEKTITLEILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQKIQRVIDSVQGASGSLQIESFYSNFPELASPNVSRLSPFADSKSNEHPKALNAQQEGCVMSPHAAASKSPSSSCSRSSSSSQCCSSGTKPQSSPLSIAGNDDPIVQEESVDNAVKRVKSEPELHLSSEAL-KILPRSQSHACVAENPKSESLLVKKGPLRSQEEAP------RVKVTHGEEKIRFRMQNNWRYSELLREITRRFGVDDPSGLQLKYMDDDSEWVLLTCDADLEECIDVCMSSQNQMIKLILVRDSQHHIGSSFGSS 897
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7UY38 ((protein NLP4-like {ECO:0000313|RefSeq:XP_009759077.1, ECO:0000313|RefSeq:XP_009759078.1}))

HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0
Identity = 520/924 (56.28%), Postives = 650/924 (70.35%), Query Frame = 0
 
Query:    3 DASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSPP----PFDPSFLW-SSMENYNGDFNWTSVP-KDSQEERQRSSYPGNLSISQPPNQIQGLGNDMLTSTSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQGT--CLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEI-AEVENSAKSSHEVSFRTSSNM--EMQESKPRELTESASSPSQYQQISADG-HVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASK----PIGNSSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPG-EGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTES--PSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            D +  P+N +L    D  MDLD +D LL +GCWLE  DG+EF   SP     PFD SF+W ++++  N +FN   +P KD QEE+Q   +  N+             N+ + ++    ++ VE  +L    W GP+     + SVMDR++ AL + +  +RD D+LLQLWVPI+R GR VLST  QPF LD N PRLANYR +SV YQF A  DSKE+ G+P RVF  KVPEW+PDVRF++ EEY RV HAQQYDVRGTLAVPVFEQG+  CLGVIE+V T+QKI Y+PELESVCEALKAV+LR SEV++T + K+C+ SYQ+ALPEI+EVL+  CET+ LPLAQTW+PCVQQGK GCRHS+EN+I+CVST DSACY+A+P +RGFHEACSEHHLL+GQGVVG+AFM+NQP FS D+TS SKTEYPLSHHA+MFGL AAVAIRLRSI TG+ DFVLEFFLP +CR+PE+ + +L +LSI+IQ VC +LR+VTD EL EE +   G+A  PS  R  K++     E ++ +S +  F+ SS +     + KP E+        ++   S  G     N++ CASG G  S  GK G++RR K +K ITL++L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSLQKIQ VIDSVQGASG  QI+SFYSNFPELASPN S+      SK    P   ++Q EG  +SP A ASKSP SSCS+SS+SS C SSGT+ Q   L+   N+D +      +  +KR  S   LH S+  + K+L RSQS+  +   P++ES    + P    E  P      RVKVT+GEEKIRFRM NS  Y +LL EIT+RF IDD +G  LKY+DDDSEWVLLTCD DLEEC +VC S+ +Q IKL L ++   H+GSS+GSS
Sbjct:    2 DETVIPSNPLLTNQSDYFMDLDYVDGLLLEGCWLETTDGNEFLQNSPANFNAPFDSSFMWPNTIDTNNVEFN--GIPSKDFQEEKQIQPFGENV-------------NNAMCTSGQSESHFVEAPELNRRWWFGPKA----SSSVMDRLIWALGHIRDCSRDKDILLQLWVPINRDGRHVLSTTDQPFLLDLNCPRLANYRQVSVNYQFPANEDSKEIVGLPGRVFADKVPEWSPDVRFFRSEEYPRVEHAQQYDVRGTLAVPVFEQGSRNCLGVIEVVMTTQKIKYRPELESVCEALKAVNLRTSEVSTTQNAKVCDLSYQAALPEILEVLKSACETHGLPLAQTWVPCVQQGKGGCRHSEENLIHCVSTEDSACYVADPHVRGFHEACSEHHLLKGQGVVGRAFMTNQPCFSADLTSYSKTEYPLSHHAQMFGLQAAVAIRLRSISTGSCDFVLEFFLPSDCRNPEEHRKMLTSLSIIIQNVCRTLRVVTDKELQEEAV-SIGEAANPSFIRSNKEQTETSQERTSWTSCDAEFQESSTVVSAFHDEKPDEMLRKEPVEFRHHNDSDYGMDFALNENHCASGEG-VSRNGKKGDRRRTKAEKTITLEILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQKIQRVIDSVQGASGSLQIESFYSNFPELASPNVSRLSPFANSKSNEHPKALNAQQEGCVMSPHAAASKSPSSSCSRSSSSSQCCSSGTKPQSSPLSIAGNDDPIVQEESVDNAVKRVKSEPELHLSSETL-KILPRSQSHACVAENPKSESLLVKKGPLRSQEEAP------RVKVTHGEEKIRFRMQNSWRYSELLREITRRFGIDDPSGLQLKYMDDDSEWVLLTCDADLEECLDVCMSSQNQMIKLILVRDSQHHIGSSFGSS 897
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4CYT4 ((protein NLP4-like {ECO:0000313|RefSeq:XP_016506302.1}))

HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0
Identity = 520/924 (56.28%), Postives = 649/924 (70.24%), Query Frame = 0
 
Query:    3 DASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSPP----PFDPSFLW-SSMENYNGDFNWTSVP-KDSQEERQRSSYPGNLSISQPPNQIQGLGNDMLTSTSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQGT--CLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEI-AEVENSAKSSHEVSFRTSSNM--EMQESKPRELTESASSPSQYQQISADG-HVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASK----PIGNSSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPG-EGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTES--PSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            D +  P+N +L    D  MDLD +D LL +GCWLE  DG+EF   SP     PFD SF+W ++++  N +FN   +P KD QEE+Q   +  N+             N+ + ++    ++ VE  +L    W GP+     + SVMDR++ AL + +  +RD D+LLQLWVPI+R GR VLST  QPF LD N PRLANYR +SV YQF A  DSKE+ G+P RVF  KVPEW+PDVRF++ EEY RV HAQQYDVRGTLAVPVFEQG+  CLGVIE+V T+QKI Y+PELESVCEALKAV+LR SEV++T + K+C+ SYQ+ALPEI+EVL   CET+ LPLAQTW+PCVQQGK GCRHS+EN+I+CVST DSACY+A+P +RGFHEACSEHHLL+GQGVVG+AFM+NQP FS D+TS SKTEYPLSHHA+MFGL AAVAIRLRSI TG+ DFVLEFFLP +CR+PE+ + +L +LSI+IQ VC +LR+VTD EL EE +   G+A  PS  R  K++     E ++ +S +  F+ SS +     + KP E+        ++   S  G     N++ CASG G  S  GK G++RR K +K ITL++L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSLQKIQ VIDSVQGASG  QI+SFYSNFPELASPN S+      SK    P   ++Q EG  +SP A ASKSP SSCS+SS+SS C SSGT+ Q   L+   N+D +      +  +KR  S   LH S+  + K+L RSQS+  +   P++ES    + P    E  P      RVKVT+GEEKIRFRM NS  Y +LL EIT+RF IDD +G  LKY+DDDSEWVLLTCD DLEEC +VC S+ +Q IKL L ++   H+GSS+GSS
Sbjct:    2 DETVIPSNPLLTNQSDYFMDLDYVDGLLLEGCWLETTDGNEFLQNSPANFNAPFDSSFMWPNTIDTNNVEFN--GIPSKDFQEEKQIQPFGENV-------------NNAMCTSGQSESHFVEAPELNRRWWFGPKA----SSSVMDRLIWALGHIRDCSRDKDILLQLWVPINRDGRHVLSTTDQPFLLDLNCPRLANYRQVSVNYQFPANEDSKEIVGLPGRVFADKVPEWSPDVRFFRSEEYPRVEHAQQYDVRGTLAVPVFEQGSRNCLGVIEVVMTTQKIKYRPELESVCEALKAVNLRTSEVSTTQNAKVCDLSYQAALPEILEVLNSACETHGLPLAQTWVPCVQQGKGGCRHSEENLIHCVSTEDSACYVADPHVRGFHEACSEHHLLKGQGVVGRAFMTNQPCFSADLTSYSKTEYPLSHHAQMFGLQAAVAIRLRSISTGSCDFVLEFFLPSDCRNPEEHRKMLTSLSIIIQNVCRTLRVVTDKELQEEAV-SIGEAANPSFIRSNKEQTETSQERTSWTSCDAEFQESSTVVSAFHDEKPDEMLRKEPVEFRHHNDSDYGMDFALNENHCASGEG-VSRNGKKGDRRRTKAEKTITLEILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQKIQRVIDSVQGASGSLQIESFYSNFPELASPNVSRLSPFANSKSNEHPKALNAQQEGCVMSPHAAASKSPSSSCSRSSSSSQCCSSGTKPQSSPLSIAGNDDPIVQEESVDNAVKRVKSEPELHLSSETL-KILPRSQSHACVAENPKSESLLVKKGPLRSQEEAP------RVKVTHGEEKIRFRMQNSWRYSELLREITRRFGIDDPSGLQLKYMDDDSEWVLLTCDADLEECLDVCMSSQNQMIKLILVRDSQHHIGSSFGSS 897
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438ETN8 ((Protein NLP2 {ECO:0000313|EMBL:RVW50985.1}))

HSP 1 Score: 944.495 bits (2440), Expect = 0.000e+0
Identity = 518/927 (55.88%), Postives = 641/927 (69.15%), Query Frame = 0
 
Query:    7 PPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSPP----PFDPSFLWSSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQPPNQIQGLGNDMLTSTSH---IGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQG--TCLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEIAEVEN--SAKSSHEVSFRTSSNMEMQES----------KPRE-LTESASSPSQYQQISADGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASKPIGN----SSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESPSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            PP    L T PD  MDLD +DEL   GCWLE  DGSEF  QSP      FDPS LW +  + N D +      + QEE QRS++PGN   S   ++ Q L   M     +     NY ++   L    WI P+   G + +VM+R++RAL Y + ST++ D L+Q+WVP++RGGRRVL+T  QPFSLD + PRLA YR ISV YQFSAE DS E+ G+P RVF+GKVPEWTPDVRF++ EEY RV +AQ +DVRGTLA+PVFEQG  TCLGVIE+V T+QK NY+PELESVC+AL+AVDLR SEV ST ++K CN  YQ+ALPEI+EVL   C T+ LPLAQTW+PC+QQGK G RH+D N I+CVST+DSAC +A+P  +GFHEACSEHHLL+GQG+ G+AF +N+P FS D++S SKT+YPLSHHARMFGLCAAVAIRLRSI+   SDFVLEFFLPV+CRDPE+QK +L +LS++IQKVC SLR+VTD EL  ET     +  V S    G++E  +V++  + K S E S   +S  E Q+S          K RE L+E +    Q+QQ S+       +D    G+ S SSVGKTGE+RR K ++ ITL +L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSL KIQ VIDSV+GASG FQI +FYS FPELASP  S     + SK   +    S Q EG   S    ASKS  SSCS SS+SS C S+GTQ  P   +   ++  VG N  EG+LKR  S V L  S+ +  K+L RSQS+K+L   P  ES   +P        EGD+  RVKVTYG+EKIRFRM ++    DL  EI +RF IDD +GFHLKYLDDD EWVLLTC+ D EEC+++C S+ +  I+L++HQ  + HLGSS GS+
Sbjct:    6 PPPETALGTVPDSSMDLDFMDELFLGGCWLETTDGSEFLLQSPSNSGSVFDPSSLWPTFGSNNVDLSANLSANNIQEETQRSNFPGNAVEST--DKTQSLSQSMTNVAGYPVQSENYLMDDFDLSRRWWIRPKSSPGPSSTVMERLIRALSYIRGSTKNKDALIQIWVPVNRGGRRVLTTNDQPFSLDPSCPRLARYRDISVNYQFSAEEDSNELAGLPGRVFLGKVPEWTPDVRFFRSEEYPRVDYAQHFDVRGTLALPVFEQGSQTCLGVIEVVMTTQKSNYRPELESVCKALEAVDLRSSEVLSTRNVKACNKFYQAALPEILEVLTSACGTHGLPLAQTWVPCIQQGKWGSRHTDGNYIHCVSTVDSACCVADPRTQGFHEACSEHHLLKGQGIAGRAFTTNEPCFSADISSFSKTQYPLSHHARMFGLCAAVAIRLRSIHVPVSDFVLEFFLPVDCRDPEEQKGMLCSLSVIIQKVCRSLRVVTDKELEGETPSLVSELTVLSDGSPGREETQKVQHTPTEKISQEQSSWMASLKEAQQSIDITPPSQKEKVRERLSEKSLEFRQHQQDSSQQGSFDCRDDSTFGKSSLSSVGKTGERRRSKAEQTITLQVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLHKIQLVIDSVKGASGAFQIGNFYSKFPELASPELSGTHPYSTSKLFDHQNPLSVQPEGDNSSTGVAASKSLSSSCSPSSSSSQCCSTGTQEHPSTCSVTGSDPMVGENSAEGMLKRVRSEVELPISSQEELKLLPRSQSHKSLPECPNLESHPAIPQSGSLASQEGDAW-RVKVTYGDEKIRFRMQSNWGLKDLRQEIGRRFNIDDSSGFHLKYLDDDLEWVLLTCEADFEECKDICGSSQNHVIRLAIHQI-SHHLGSSLGST 928
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1ALT3 ((NIN 1 {ECO:0000313|EnsemblPlants:PGSC0003DMT400025657}))

HSP 1 Score: 943.34 bits (2437), Expect = 0.000e+0
Identity = 521/933 (55.84%), Postives = 658/933 (70.53%), Query Frame = 0
 
Query:    3 DASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSP----PPFDPSFLW-SSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSIS--QPPN--QIQGLGNDM---LTSTSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQGT--CLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEIAEVENSAKSSHEVSFRTSSNME-MQESKPRELTESASSPSQYQQISADGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASK----PIGNSSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGT-----QAQPCNLNGLNNEDQVGCNPG-EGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESP--SRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVC-ESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            D    P+N +L T  D +MDLD +D L  +GCWLE+ DG+EF   SP     PFD SF+W ++++  N +FN  S  KD+Q+E+QR S   NLSI+  Q  N  ++Q  G +M   + ++S   N+ VE  +L    WIGP+     + SVMDR++ AL Y +  +RD D+LLQLWVPI+R GRRVLST  QPF LD N P+LANYR +SVKYQF A  DSK++ G+P RVF  KVPEWTPDVRF++ EEY RV HAQQYDVRGTLAVPVFEQG+  CLGVIE+V T+QKI Y+ ELESVC+AL+AVDL  SEV++T   K+C+ SYQ+ALPE++EVL+  CET+ LPLAQTW+PC+QQGK GCRHS+EN+I+CVST DSACY+A+P ++GFH+ACSEHHLL+G+GVVG+AF +NQP FS D+TS SK+EYPLSH+A+MFGL AAVAIRLRSI TG+SDFVLEFFLP +CR+PED + +L +LSI+IQ VC +LR+VTD EL EET+   G+    + +   +      E ++ +S +  F+ SS M   Q+ KP E+    S   ++++ S            A   G   ++GKTG++RR K +K ITL +L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSLQKIQ VIDSVQGASG  QI+SFYSNFPELASPN+++      SK    P   ++Q EG   SP   ASKSP SS S+SS+SS C SSGT     Q+QP N+ G  +ED +      +  +KR  S   LH S+  + K + RSQS+  +   P++E+P   R P+   E  P      RVKVT+GEEKIRFRM NS  Y+DLL EIT+RF IDD +G  LKYLDDDSEWVLLTCD DLEEC +VC  S+  Q IKL L Q+   H GSS+GSS
Sbjct:    2 DERVIPSNPLLTTPSDYLMDLDYMDGLFLEGCWLESTDGNEFLQHSPGIFNAPFDSSFMWPTTIDANNVEFNGIS-SKDAQQEKQRPSLTENLSINHCQEINYAKVQSFGENMNNAMCTSSLSENHLVEAPELNKRWWIGPKA----SSSVMDRLIWALGYIRDCSRDKDILLQLWVPINRDGRRVLSTTNQPFLLDLNCPQLANYREVSVKYQFPANEDSKDIVGLPGRVFADKVPEWTPDVRFFRSEEYPRVEHAQQYDVRGTLAVPVFEQGSRNCLGVIEVVMTTQKIKYRSELESVCKALEAVDLSTSEVSTTQDAKVCDLSYQAALPEVLEVLKSACETHGLPLAQTWVPCIQQGKGGCRHSEENLIHCVSTEDSACYVADPRVQGFHDACSEHHLLKGKGVVGRAFNTNQPCFSADLTSYSKSEYPLSHYAKMFGLQAAVAIRLRSISTGSSDFVLEFFLPSDCRNPEDHRKMLTSLSIIIQNVCRTLRVVTDKELQEETV-SMGEVANHTVEPHKEHTETSQERTSWTSCDAEFQESSVMSTFQDEKPDEMLRKDSVEFRHRKNS------------AYEEGVSRNLGKTGDRRRAKAEKTITLQVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQKIQRVIDSVQGASGTLQIESFYSNFPELASPNATRMSPFADSKSNEHPTALNTQQEGCITSPNPDASKSPSSSSSRSSSSSQCCSSGTKPKSPQSQPSNIVG--DEDLIVQEKSVDNAVKRIKSEPELHLSSEAL-KTIPRSQSHACVAENPKSENPLVKRSPSTSQEEAP------RVKVTHGEEKIRFRMQNSWRYNDLLREITRRFGIDDPSGLQLKYLDDDSEWVLLTCDADLEECIDVCMSSSQIQMIKLILVQDSQHHYGSSFGSS 907
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5APM7 ((Uncharacterized protein {ECO:0000313|EMBL:CAN75893.1}))

HSP 1 Score: 941.414 bits (2432), Expect = 0.000e+0
Identity = 521/930 (56.02%), Postives = 640/930 (68.82%), Query Frame = 0
 
Query:    7 PPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSPP----PFDPSFLWSSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQPPNQIQGLGNDMLTSTS---HIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQG--TCLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEIAEVEN--SAKSSHEVSFRTSSNMEMQES----------KPRE-LTESASSPSQYQQISADGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAA-KSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPN------SSKHILLTASKPIGNSSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGCNPGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESPSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            PP    L T PD  MDLD +DEL   GCWLE  DGSEF  QSP      FDPS LW +  + N D +      + QEE QRS++PGN   S   ++ Q L   M           NY ++   L    WI P+   G + +VM+R++RAL Y + ST++ D L+Q+WVP++RGGRRVL+T  QPFSLD + PRLA YR ISV YQFSAE DS E+ G+P RVF+GKVPEWTPDVRF++ EEY RV +AQ +DVRGTLA+PVFEQG  TCLGVIE+V T+QK NY+PELESVC+AL+AVDLR SEV ST ++K CN  YQ+ALPEI+EVL   C T+ LPLAQTW+PC+QQGK G RH+D N I+CVST+DSAC +A+P  +GFHEACSEHHLL+GQG+ G+AF +N+P FS D+TS SKT+YPLSHHARMFGLCAAVAIRLRSI+   SDFVLEFFLPV+CRDPE+QK +L +LSI+IQKVC SLR+VTD EL  ET     +  V S    G++E  +V++  + K S E S   +S  E Q+S          K RE L+E +    Q+QQ S+       +D    G+ S SSVGKTGE+RR K ++ ITL +L+QYFAGSLKDAA KS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSL KIQ VIDSV+GASG FQI +FYS FPELASP        S   L    KP+  S Q EG   S    ASKS  SSCS SS+SS C S+GTQ  P   +   ++  VG N  EG+LKR  S V L  S+ +  K+L RSQS+K+L   P  ES   +P        EGD+  RVKVTYG+EKIRFRM ++    DL  EI +RF IDD +GFHLKYLDDD EWVLLTC+ D EEC+++C S+ +  I+L++HQ  + HLGSS GS+
Sbjct:    6 PPPETALGTVPDSSMDLDFMDELFLGGCWLETTDGSEFLLQSPSNSGSVFDPSSLWPTFGSNNVDLSANLSANNIQEETQRSNFPGNAVEST--DKTQSLSQSMTNVAGXPVQSENYLMDDFDLSRRWWIRPKSSPGPSSTVMERLIRALSYIRGSTKNKDALIQIWVPVNRGGRRVLTTNDQPFSLDPSCPRLARYRDISVNYQFSAEEDSXELAGLPGRVFLGKVPEWTPDVRFFRSEEYPRVDYAQHFDVRGTLALPVFEQGSQTCLGVIEVVMTTQKSNYRPELESVCKALEAVDLRSSEVLSTRNVKACNKFYQAALPEILEVLTSACGTHGLPLAQTWVPCIQQGKWGSRHTDGNYIHCVSTVDSACCVADPRTQGFHEACSEHHLLKGQGIAGRAFTTNEPCFSADITSFSKTQYPLSHHARMFGLCAAVAIRLRSIHVPVSDFVLEFFLPVDCRDPEEQKGMLCSLSIIIQKVCRSLRVVTDKELEGETPSLVSELTVLSDGSPGREETQKVQHTPTEKISQEQSSWMASLKEAQQSIDITPPSQKEKVRERLSEKSLEFRQHQQDSSQQGSFDCRDDSTFGKSSLSSVGKTGERRRSKAEQTITLQVLQQYFAGSLKDAAIKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLHKIQLVIDSVKGASGAFQIGNFYSKFPELASPELSGTHPYSTSKLFDHQKPL--SVQPEGDNSSTGVAASKSLSSSCSPSSSSSQCCSTGTQEHPSTCSVTGSDPMVGENSAEGMLKRVRSEVELPISSQEELKLLPRSQSHKSLPECPNLESHPAIPQSGSLASQEGDAW-RVKVTYGDEKIRFRMQSNWGLKDLRQEIGRRFNIDDSSGFHLKYLDDDLEWVLLTCEADFEECKDICGSSQNHVIRLAIHQI-SHHLGSSLGST 929
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0V0IWK3 ((Uncharacterized protein {ECO:0000313|EMBL:JAP36395.1}))

HSP 1 Score: 938.717 bits (2425), Expect = 0.000e+0
Identity = 518/934 (55.46%), Postives = 651/934 (69.70%), Query Frame = 0
 
Query:    3 DASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLEANDGSEFFNQSP----PPFDPSFLW-SSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQPPN----QIQGLGNDM---LTSTSHIGNYSVEGSQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQGT--CLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMR---AGKAVVPSADRLGKQEIAEVENSAKSSHEVSFRTSSNME-MQESKPRELTESASSPSQYQQISADGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASK----PIGNSSQNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGT-----QAQPCNLNGLNNEDQVGCNPGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESP--SRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQHLGSSYGSS 906
            D    P+N +L T  D +MDLD +D L  +GCWLE  DG+EF   SP     PFD SF+W ++++  N +FN  S  KD+Q+E+QR S   NLSI+        ++Q  G +M   + ++S   N+ VE  +L    WIGP+     + SVMDR++ AL Y +  +RD  +LLQLWVPI+R GRRVLST  QPF LD N P+LANYR +SVKYQF A  DSK++ G+P RVF  KVPEWTPDVRF++ EEY RV HAQQYDVRGTLAVPVFEQG+  CLGVIE+V T+QKI Y+ ELESVC+AL+AVDL  SEV++T   K+C+ SYQ+ALPE++EVL+  CET+ LPLAQTWIPC+QQGK GCRHS+EN+I+CVST DSACY+A+P ++GFH+ACSEHHLL+GQGVVG+AF +NQP FS D+TS SK+EYPLSH+A+MFGL AAVAIRLRSI TG+SDFVLEFFLP +CR+PED + +L +LSI+IQ VC +LR+VTD EL EET      A   V P  +     +    E ++ +S +  ++ SS M   Q+ KP E+    S   ++++ S            A   G   ++G+TG++RR K +K ITL +L+QYFAGSLKDAAKS+GVCPTTLKRICRQHGI RWPSRKIKKVGHSLQKIQ VIDSVQGASG  QI+SFYSNFPELASPN+S+      SK    P   ++Q EG   SP   ASKSP SS S+SS+SS C SSGT     Q+ P N+ G +++  V     +  +KR  S   LH S+  + K + RSQS+  +   P++E+P   R P+   E  P      RVKVT+GEEKIRFRM NS  Y+DLL EIT+RF IDD +G  LKY DDDSEWVLLTCD DLEEC +VC S+  Q IKL L Q+   H GSS+GSS
Sbjct:    2 DERVIPSNPLLTTPSDYLMDLDYMDGLFLEGCWLETTDGNEFLQHSPGIFNAPFDSSFMWPTTIDANNVEFNGIS-SKDAQQEKQRPSLTENLSINHXQEINYAKVQSFGENMNNAMCTSSLSENHLVEAPELNKRWWIGPKA----SSSVMDRLIWALGYIRDCSRDKGILLQLWVPINRDGRRVLSTTNQPFLLDLNCPQLANYREVSVKYQFPANEDSKDIVGLPGRVFADKVPEWTPDVRFFRSEEYPRVEHAQQYDVRGTLAVPVFEQGSRNCLGVIEVVMTTQKIKYRSELESVCKALEAVDLSTSEVSTTQDAKVCDLSYQAALPEVLEVLKSACETHGLPLAQTWIPCIQQGKGGCRHSEENLIHCVSTEDSACYVADPRVQGFHDACSEHHLLKGQGVVGRAFNTNQPCFSADLTSYSKSEYPLSHYAKMFGLQAAVAIRLRSISTGSSDFVLEFFLPSDCRNPEDHRKMLTSLSIIIQNVCRTLRVVTDKELQEETXSMGEVANHXVEPHKEHTETSQ----ERTSWTSCDAEYQESSVMSTFQDEKPDEMLRKDSVEFRHRKNS------------AYEEGVSRNLGRTGDRRRAKAEKTITLQVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQKIQRVIDSVQGASGTLQIESFYSNFPELASPNASRMSPFADSKSNEHPTALNTQQEGCITSPNPDASKSPSSSSSRSSSSSQCCSSGTKPXSPQSHPLNIVG-DDDLIVQEKSVDNAVKRVKSEPELHLSSEAL-KTIPRSQSHACVAENPKSENPLVKRSPSTSQEEAP------RVKVTHGEEKIRFRMQNSWRYNDLLREITRRFGIDDPSGLQLKYXDDDSEWVLLTCDADLEECIDVCXSSQIQMIKLILVQDSQHHYGSSFGSS 906
[Close]
BLAST of XM_017402841.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EJA4 ((Plant regulator RWP-RK family protein {ECO:0000313|EMBL:GFY86296.1}))

HSP 1 Score: 937.176 bits (2421), Expect = 0.000e+0
Identity = 514/913 (56.30%), Postives = 631/913 (69.11%), Query Frame = 0
 
Query:    1 MGDASFPPNNNMLYTSPDPVMDLD-LDELLFDGCWLE--ANDGSEFFNQSP----PPFDPSFLWSSMENYNGDFNWTSVPKDSQEERQRSSYPGNLSISQPPNQIQGLGNDMLTSTSHIGNYSVEG-SQLGSNLWIGPRPIHGRAMSVMDRVVRALEYFKSSTRDTDVLLQLWVPIDRGGRRVLSTCGQPFSLDSNSPRLANYRAISVKYQFSAEHDSKEVEGMPSRVFMGKVPEWTPDVRFYKREEYQRVRHAQQYDVRGTLAVPVFEQGT--CLGVIEIVTTSQKINYKPELESVCEALKAVDLRGSEVASTHSMKICNGSYQSALPEIMEVLRCTCETNRLPLAQTWIPCVQQGKEGCRHSDENIINCVSTLDSACYIAEPSIRGFHEACSEHHLLRGQGVVGKAFMSNQPSFSPDVTSDSKTEYPLSHHARMFGLCAAVAIRLRSIYTGTSDFVLEFFLPVNCRDPEDQKILLNALSIVIQKVCHSLRIVTDTELHEETLMRAGKAVVPSADRLGKQEIAEVENSAKSSHEVSFRTSSNMEMQESKPRELTESASSPSQYQQISADGHVTFNQDLCASGRGSYSSVGKTGEKRRGKTDKNITLDMLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKIQGVIDSVQGASGGFQIKSFYSNFPELASPNSSKHILLTASKPIGNSS----QNEGSALSPEAVASKSPPSSCSQSSNSSHCYSSGTQAQPCNLNGLNNEDQVGC-NPGEGILKRATSAVHLHASTHDVPKVLSRSQSYKNLIRQPRTESPSRLPNDIGENIPEGDSTSRVKVTYGEEKIRFRMLNSMTYDDLLVEITKRFCIDDRTGFHLKYLDDDSEWVLLTCDDDLEECREVCESAHSQTIKLSLHQNPTQH 898
            M +  FPPN  ML  S +  MDLD +DELL +GCWLE     GSEF N+SP    P FD SF+W S E  NG+ +   +  ++Q+ERQRSS+P NL+ S+P  Q+Q   N   TS+       + G S L    WIGP+   G   SVMDR++RAL Y K STR+ D L+QLWVP++ GGRR L+T  QPF LD NSP LA+YR ISV YQF  E +SKE+ G+P RVF GKVPEW+PDVRF++ +E+ RV HAQQ  +RGTLA+PVFEQG+  CLGVIE+V T+QK N +PE ESVC+AL+AVDLR SEV++  ++K CNGS Q+ALPEI+EVLR  C T++LPLAQTW+PC+QQGKEG RHSDEN   CVST+DSACY+ +  ++ F EACSEHHLL+G+GV G+AFM+NQP FS DVTS +KTEYPLSHHA++FGL AAVAIRLRSIYTGT+DFVLEFFLPV+C   E+Q+ +L +LSI+IQ+VC SLRI+TD EL EE      KA+  S + +   +    E S K S  + F+ S                       Q  S    V+F+ D  + G GS+ +  K GE+R  K +K ITL  LRQYF+GSLKDAAKSLGVCPTTLKRICRQHGI RWPSRKIKKVGHSLQ++Q V+DSVQG SG FQI+SFYSNFP+LASPN S+    + SKP   S     Q E    SP+A ASKSP SSCS SS+SS C SS TQ     LN +  EDQV    PG G+L RA S V LH S+ +V K L RSQS+K+LI   ++     +P   G++  E D+  R+KVTY EEKIRFRM N   Y +LL EI +RF IDD  GFHLKYLDD+ +WV LTCD DLEEC ++C    + TIKLSL QNP QH
Sbjct:    2 MDNGDFPPNT-MLADSAN--MDLDYIDELLLEGCWLEMETTQGSEFLNRSPSTSSPLFDSSFIWPSFEASNGEPSVNPLQNNAQQERQRSSFPENLTTSEP--QVQ---NPTKTSSPSHNLLDLSGCSDLSGRFWIGPKANSGPGSSVMDRLIRALGYIKDSTRNKDALIQLWVPVNSGGRRFLTTNDQPFFLDFNSPGLASYRDISVNYQFPTEENSKEIVGLPGRVFKGKVPEWSPDVRFFRNDEFARVAHAQQCGIRGTLALPVFEQGSQNCLGVIEVVMTTQKANCRPEFESVCKALEAVDLRSSEVSNGQNVKACNGSSQAALPEILEVLRSACGTHQLPLAQTWVPCIQQGKEGSRHSDENHTRCVSTVDSACYVTDLRMQDFQEACSEHHLLKGEGVAGQAFMTNQPCFSSDVTSFTKTEYPLSHHAKIFGLRAAVAIRLRSIYTGTADFVLEFFLPVDCTAFEEQRKMLASLSIIIQRVCRSLRIITDKELEEEN-----KAIRESGNAVPLFQEKPSEASMKKS--LDFKKSQ----------------------QDPSLRAIVSFSGDHSSFGEGSFLNAEKAGERRYAKAEKTITLQTLRQYFSGSLKDAAKSLGVCPTTLKRICRQHGIKRWPSRKIKKVGHSLQRLQTVMDSVQGGSGAFQIESFYSNFPDLASPNMSRISPFSTSKPSDRSKLPNVQPESGTFSPQAAASKSPSSSCSHSSSSSQCCSSKTQPNASTLNTIGGEDQVAKETPGNGVLTRARSEVKLHVSSDEVQKTLPRSQSHKSLIEHRKSGKHPPVPRSGGKS-QEQDAL-RIKVTYEEEKIRFRMQNKWAYKNLLQEIVRRFDIDDTNGFHLKYLDDEFDWVSLTCDADLEECIDLCRLTQTHTIKLSLFQNPQQH 875
Match NameStatsDescription
A0A5B7BEM2E-Value: 0.000e+0, PID: 60.41(Uncharacterized protein {ECO:0000313|EMBL:MPA6611... [more]
A0A5J5B435E-Value: 0.000e+0, PID: 58.56(Uncharacterized protein {ECO:0000313|EMBL:KAA8537... [more]
A0A1J6IGZ9E-Value: 0.000e+0, PID: 56.37(Protein nlp4 {ECO:0000313|EMBL:OIT03946.1})[more]
A0A1U7UY38E-Value: 0.000e+0, PID: 56.28(protein NLP4-like {ECO:0000313|RefSeq:XP_00975907... [more]
A0A1S4CYT4E-Value: 0.000e+0, PID: 56.28(protein NLP4-like {ECO:0000313|RefSeq:XP_01650630... [more]
A0A438ETN8E-Value: 0.000e+0, PID: 55.88(Protein NLP2 {ECO:0000313|EMBL:RVW50985.1})[more]
M1ALT3E-Value: 0.000e+0, PID: 55.84(NIN 1 {ECO:0000313|EnsemblPlants:PGSC0003DMT40002... [more]
A5APM7E-Value: 0.000e+0, PID: 56.02(Uncharacterized protein {ECO:0000313|EMBL:CAN7589... [more]
A0A0V0IWK3E-Value: 0.000e+0, PID: 55.46(Uncharacterized protein {ECO:0000313|EMBL:JAP3639... [more]
A0A7J0EJA4E-Value: 0.000e+0, PID: 56.30(Plant regulator RWP-RK family protein {ECO:000031... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.