XM_017402156.1

Resource Type: 
Polypeptide
Name: 
XM_017402156.1
Identifier: 
XM_017402156.1-protein
Sequence: 
MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPP
PRRRNYHHPIESIESELDLERYADLSYQQQEEEEDLKTVNAGGYNAVAFS
YGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLVIPPTEKLHQIIARTAIY
VSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEEK
PQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAI
TAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGS
KAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTSMVEPPSEMKKMIAKIV
EFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVS
GRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMV
IGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSR
SSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREA
NLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVD
AEGDRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNS
SKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHR
SRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRK
KHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRK
KHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIG
SDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGGAHREPSVDVSSSFQD
QKSSSQPLEPTEVSNDLRAKIRAMLLETM
Sequence Length: 
929
Sequence Checksum: 
979113b73c12c7732e44e9bc4cde4958
View location in JBrowse: 
DCARv2_Chr6:10030378..10035338+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402156.1, derives from mRNA, XM_017402156.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZBQ8 ((Uncharacterized protein {ECO:0000313|EMBL:MPA41449.1}) (Fragment))

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 491/990 (49.60%), Postives = 630/990 (63.64%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSS----------PPPPRRRNYHHPIESIESELDLERYADLSYQQQEEEEDL----KTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTERG----VGGGALSLLGSLYGFGDDDDAAVENALTSEENASS------GAITAHMSEKT--ASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTSM----VEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEH------VSSLGSSRASHPQSVAQKSDENGAR--------------AREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSE--PCNLSGVDAE-GDRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKST--DDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M+++VVGRHALLFDDDA AAFVNS DALVEWNS+ IDRYDVRHLLS           P      +    I S+ESELD ERY DL     E++ +L    K V+ G Y AVAFSYGN + S   K+SD+ L  S F PPFPVP  L+  +PPTEK+HQIIARTA++VSKHG QSEIVLRVKQGDNPTFGFL+P HHLH+YFR+LVDH EL+  +   KPQND  + TE      VGGGALSLLGS+YG+G+D+D A E+A  S+EN S        A  +H SEKT    +++    A S HP  S        K+K   LKRNSF S SKAG+ +  +K  D++ S SA      S+  T + +    +EPP ++K+++ +IVEFI+KNGKQFEAVLIEQDS+HGRFPFLL SNQY+ YY K+L++AQ+S+++G++ + EKD S  HG  KKT   K    SL   + C++P+D DRK+KFKMVIGKSK DG DPPSKA QQQ  V VDAAAAAAILQAAT+GI+ PNL  LS +SLN   N+  H       SSLGS  +S P+SV QKSD+NG +              A E A EA+S EA LTREQKLKAERL+RAKMFV+M+KSG  P +KTE S G S E      SG  AE  + A +EREGSS PL++  ++  E +  K+S DEYNER+ RRKYRS S + +                             + D  EK H+HS +   S  +SHD  ++ E     E+D K+SRK HRSY+SS  EDEEE                           RDHK+S+K HRS  S+  D+++++E  D +  +K    H S HHSRD+H+H+ +RH+SSK+  S++ ++H+ TS +E+     SD+   +    ERE+LEEGEIS+++SDQSRGS G  A RE S D+ +S+QD ++ S+P E TEVS+DLRAKIRAML+ T+
Sbjct:   41 MDLDVVGRHALLFDDDATAAFVNSGDALVEWNSLLIDRYDVRHLLSGPPPPRRRRNLPQQTHSTSSPPSISSLESELDHERYLDLPPSSDEQDSELDKGAKPVDGGSYRAVAFSYGNTDHSTDEKNSDAGLGDSGFRPPFPVPESLLQSLPPTEKMHQIIARTAMFVSKHGGQSEIVLRVKQGDNPTFGFLIPGHHLHAYFRFLVDHQELMQYDIDGKPQNDNKTNTEHNQTDDVGGGALSLLGSVYGYGEDEDGAGEDASESKENVSWEKFDAVSAAVSHGSEKTDFPVIEAGKEGAASKHPRTSS-------KEKAPALKRNSFISASKAGTTTSTKK-GDTLSSISAVDKSQVSAMPTMSKIEPLVLEPPFDLKRLVDRIVEFILKNGKQFEAVLIEQDSKHGRFPFLLPSNQYHPYYQKVLQKAQESKLAGKSFLSEKDDSVGHGPDKKTSRSKEESDSLSLGSGCDMPYDSDRKEKFKMVIGKSKKDGQDPPSKATQQQFGVSVDAAAAAAILQAATRGIKNPNLGILSSTSLN--GNSHMHSSEGGQASSLGSHLSSQPESVIQKSDQNGKQCVSVPVAKAIAKTAALEVASEADSSEARLTREQKLKAERLKRAKMFVSMLKSGDVP-LKTEPSRGISVERQESGFSGSGAEIVNLAGKEREGSSVPLDVDTSDKNEKSEKKYSDDEYNERRLRRKYRSRSMRDEDDD--------------------------DDDKEEKDHKHSMKKQLSPCSSHDDGKEGE-----ERDRKHSRKKHRSYRSSR-EDEEE---------------------------RDHKHSRKKHRSHHSSREDEEEDEEENDHKHSRKKHRSHRSSHHSRDTHKHR-KRHSSSKEMGSRQWHKHDSTSDDEHQHDKESDKRRKK-SHSEREELEEGEISSRISDQSRGSVGDVACREVSPDLLNSYQDGRAPSRPSETTEVSDDLRAKIRAMLMATL 958
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QDB5 ((Splicing factor, suppressor of white-apricot like {ECO:0000313|EMBL:PSS06120.1}))

HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 469/956 (49.06%), Postives = 616/956 (64.44%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPR-RRNYHHP--IESIESELDLERYADL--SYQQQEEEEDLKTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTERG----VGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSI--SIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHR-RHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EV+GRH LLFDDDA AAFVNS DALV+WN++ IDRYDVRHLLS+P  PR RRN   P    SIESELD ER+ DL  S   QE +E +K   AGGY+ VAFSYGN ++S   K+ D  L    F PPFPVP  L+  +PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVD+ +LL S+   K + +K  G+E      VG GAL LLGS YG G+D+DAAVEN+  S+E +       H S KT +  ++    +A+  HP        + PK+KV +LKRNSFTS  K+G  ++ RKE D +   SA   + Q S     S     ++EPPS++K+++ KIVEFIM+NGKQFEAVLIEQDS+HG+FPFLL SNQY+ YY+K+L++AQ+S ++G++ + EKDGS ++G  KKT + K + SS   S  C+IP+D DRK+KFKMVIGK K DG DPP KA Q Q   GV+ AAAAAILQAAT+G + PN   LS +SLN  D+ SE          S P  VA+   +    A EAA EA+S EA+LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE     S EP   +GV + G    D A +ERE  S PL++  ++ IE +  K+S DE +ER+ RRKYRS S +               E+E   +    +  +EE+D  E+ H+HSR+ HRS R+S    E+ + E ++E++H+Y+RK H SY SS +ED EE  +                       +RDHK+S+K HRS +  D+ DED  +D   +   +     R       RHKH+ RH SSK++ES R  R    S +++ L   S+  + ++     E+LEEGEI +K+SD+SRGS G G  RE S+D+SSS Q+ ++ SQP   TEVS++LRAKIRAML+ T+
Sbjct:    1 MDLEVLGRHVLLFDDDATAAFVNSVDALVDWNALLIDRYDVRHLLSAPLLPRKRRNPLSPPSASSIESELDHERFLDLPTSSDDQELDEGVKPDVAGGYHNVAFSYGNTDDSTDQKNPDDGLGDLGFRPPFPVPESLLQSLPPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDNQDLLQSDVDGKSEAEKKGGSEGNQTDVVGAGALFLLGSFYGSGEDEDAAVENSSESKETS-----VCHTSGKTETPGNLDGKDEAIGKHP--------SPPKEKVLILKRNSFTSAPKSGKLNNTRKEGDRIDLLSAAVDKPQPSAPPNISHVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLIEQDSKHGKFPFLLPSNQYHPYYVKVLQKAQESNLNGKSFISEKDGSVVNGLDKKTHLSKETDSSASGSTCCDIPYDGDRKEKFKMVIGKLKKDGQDPPYKANQPQ--FGVNVAAAAAILQAATRGTKNPNFGILSSTSLN--DDKSEQ-----KRDRSGPIPVAKAITKTA--ALEAANEADSSEAHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPLRSLSVEPQG-TGVSSSGDGVVDLAGKERESISVPLDVNTSDKIEKSEKKYS-DENHERRLRRKYRSRSGR--------------CEEEGEEEEEEEEEEEEEEDEEEEDHKHSRKKHRSHRSSR---EEGKEEDEEEREHRYARKKHWSYHSSREEDGEEDGED----------------------ERDHKHSRKKHRSHE--DNKDEDYEDDGHHKHSKKKHRSHRSSRHSRDRHKHKERHFSSKNKES-RHRRKQERSSDDDHLRRSSNSRHRKISH-SEEELEEGEICSKISDRSRGSVGAGISREASLDLSSSCQEGRAPSQPSVATEVSDELRAKIRAMLMATL 886
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9ULU7 ((protein SWAP isoform X1 {ECO:0000313|RefSeq:XP_011095416.1}))

HSP 1 Score: 652.514 bits (1682), Expect = 0.000e+0
Identity = 457/985 (46.40%), Postives = 617/985 (62.64%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYHHP---IE--SIESELDLERYADLSYQ--QQEEEEDLKTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEE--KPQNDKISG-----TERGVGGGALSLLGSLYGFGDDD--DAAVENALTSEENASSGAITAHMSEKTASVKSISID-ALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHV--SSLGSSRASHPQSVAQKSDEN----------GARAR----EAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVD---AEGDRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKH----------SRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGE--ENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEP-TEVSNDLRAKIRAMLLET 928
            M++EVVGRHALLFDDDAMAAFVNS DALVEW+S+ IDRYDVRHLLS PPP RRR+ +     +E  S+E+ELD ERY DL  Q  Q + E+D    ++ GY AVAFSYGN + SA  +D+D+  +SS F PPFP+P DL+  +PPTEK HQIIARTA++VSK+G QSEI+LRVKQGDNPTFGFLMP HHLH+YFR+LVDH ELL+SE     Q+++I G        GVGG ALSLLGS+YG G+++  D  V+    + +++S     +H S+K  S   +  D ++S +P+ S        K+KV  +K+NS  + SK+G+     +++ SV   SA   +++S  +  TS     +VEPP E+K++I KIVEFIM+NGKQFEA LIEQDS+HGRFPFLL SNQY+ YYLK+L+  Q+SRV+G++    KD      + KK  V K    SL+SA C++P + DRK+KFKMVIGKSK D  +  SK  QQ+  + VDAAAAAAILQAAT+GI+  NL  +S +S     N+SE +   +LGS  +S P +  +KS ++           A AR    EAAGEA+S EA+LT+EQKLKAERL+RAK+FVAM+KSG  P  K  +S G+S EP + SGV    +E +   ++REGS AP+++      E     +  +E+ ER ++RKYRS       A    D +ED+  DE   +H             +H  E++   E  H+H R+ HR   +S + ++K E   +D +DHK  +  HRS++S   + E+E ED+    ++               +    + S K +          ED ++D    KK R +HHS H SRD HRHK  R  SS+D+ES+R  +H+ +S +  EN   I   + NG     ER +LEEGEIS +VSD+SRG AGG   RE S+DV SS   Q++SSQP E  T+V +DLRAKIRAML+ T
Sbjct:    1 MDLEVVGRHALLFDDDAMAAFVNSGDALVEWHSLNIDRYDVRHLLSGPPPSRRRSRNSETILVEDLSLEAELDHERYLDLPSQSDQPDVEDDEHRPDSLGYRAVAFSYGNND-SADQRDADAGAESSGFLPPFPIPGDLLHCLPPTEKAHQIIARTAMFVSKNGGQSEIILRVKQGDNPTFGFLMPGHHLHAYFRFLVDHPELLNSESDGNSQDERIKGGGEPNNSNGVGG-ALSLLGSVYGSGEEEEGDDTVKTERDASQDSSVTDSISHGSKKIESQAHMMKDESVSRNPILSN-------KEKVLTVKKNSLINASKSGTVKGMEEKSRSV---SAAADKAKSLTMGMTSKIEPLIVEPPPELKRLIDKIVEFIMRNGKQFEATLIEQDSKHGRFPFLLPSNQYHSYYLKVLQTTQESRVNGKSLYPGKDDLVGRRTDKKASVLKEKDFSLDSAVCDMPLESDRKEKFKMVIGKSKKDIQETESKGAQQECGITVDAAAAAAILQAATRGIKNSNLHIISSTSPGVHVNSSEVIQPGTLGSLPSSRPGNAVEKSGQSESHNFSAVATNAIARTVAGEAAGEADSAEAHLTKEQKLKAERLKRAKLFVAMLKSGEVP-FKAGTSRGSSLEPLD-SGVSRSASEVNLDGKDREGSLAPVDLDMPATGEKREKNYFGEEHAERLSKRKYRSR------AGGCEDVDEDDYGDENTKEHESRSRRNSGSRSRRHDGEDESAEEMKHKHHRKRHRHHSSSEENEDKGESSEED-RDHKRHKSKHRSHRS---QREDECEDKYKEDRNHKRSRKKHRSHSSSHEHSRKRRSSKQYLQ--------EDNHDDHGIDKKSRKKHHS-HRSRDKHRHKSGR--SSRDKESRRNRKHDTSSDDDRENSSSIDKHK-NGS--SDERNELEEGEISYRVSDESRGIAGGHISRETSIDVVSSL--QRASSQPSETITDVPDDLRAKIRAMLMAT 945
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0G2E2 ((SWAP (Suppressor-of-White-APricot)/surp domain-containing protein {ECO:0000313|EMBL:GFZ04942.1}))

HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0
Identity = 466/978 (47.65%), Postives = 616/978 (62.99%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRR-NYHHP--IESIESELDLERYADLSYQQQEEE-------------------------EDLKTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTER----GVGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSI--SIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EV+GRH LLFDDDA AAFVNS DALV+WN++ IDRYDVRHLLS+P  PRRR N   P    SIESELD ER+ DL     ++E                         E  K   AGGY+ VAFSYGN ++S   K+ D  L    F PPFPVP  L+  +PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVD+ +LL S+   K + +K  G+E     GVG GAL LLGS YG G+D+DAAVEN+  S+E +       H S KT +  ++    +A+  HP        + PK+KV +LKRNSFTS  K+G  ++ RKE D +   S    + Q S     S     ++EPPS++K+++ KIVEFIM+NGKQFEAVLIEQDS+HG+FPFLL  NQY+ YY+K+L++AQ+S+++G++ + EKDGS ++G  KKT + K + SS   S  C+IP+D DRK+KFKMVIGK K DG DPP KA Q Q  V VDAAAAAAILQAAT+G + PN   LS +SLN  D+ SE          S P  VA+   +    A EAA EA+S EA+LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE     S EP   +GV + G    D A +ERE  S PL++  ++ IE +  K+S DE +ER+ RRKYRS S + +                        +  +EE++  E+ H+HSR+ HRS R+S    E+ + E ++E++H+Y+RK H SY SS +ED                          G+D+RDHK+S+K HRS +   D+D ++    +  KK    H S  HSRD H+HK  RH SSK++ES+ + +   +S +E+ L   S+  + ++     E+LEEGEI +K+SD+SRGS G G  RE S+D+SSS Q+ ++ SQP   TEV ++LRAKIRAML+ T+
Sbjct:    1 MDLEVLGRHVLLFDDDATAAFVNSGDALVDWNALLIDRYDVRHLLSAPLLPRRRRNPLSPPSTSSIESELDHERFLDLPTSSDDQEGHCCDMGFVLARRAFTWRGPDKKLDEGAKPDVAGGYHNVAFSYGNTDDSTDQKNPDDGLGDLGFRPPFPVPESLLQSLPPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDNQDLLRSDVDGKSEAEKKGGSEGNQTDGVGAGALFLLGSFYGSGEDEDAAVENSSESKETS-----FFHASGKTETPGNLYGKDEAIGKHP--------SPPKEKVLILKRNSFTSAPKSGKLNNTRKEGDRIDLLSGAVDKPQPSAPPNISHVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLIEQDSKHGKFPFLLPPNQYHPYYVKVLQKAQESKLNGKSFISEKDGSVVNGLDKKTHLSKETDSSASGSTCCDIPYDGDRKEKFKMVIGKLKKDGQDPPYKANQPQFGVNVDAAAAAAILQAATRGTKNPNFGILSSTSLN--DDKSEQ-----KRDRSDPVPVAKAIAKTA--ALEAANEADSSEAHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPLRSLSVEPQG-TGVSSSGDGVVDLAGKERESISVPLDVNTSDKIEKSEKKYS-DENHERRLRRKYRSRSGRCEEE-----------------GEEEEEEEEEEEEEEEEDHKHSRKKHRSHRSSR---EEGKEEDEEEREHRYARKKHWSYHSSREED--------------------------GEDERDHKHSRKKHRSHEDDKDEDCEDDGHHKHSKKKHRSHRSSRHSRDRHKHKE-RHFSSKNKESRHRRKQERSSDDEH-LRRSSNSRHRKISH-SEEELEEGEICSKISDRSRGSVGTGISREASLDLSSSCQEGRAPSQPSVATEVPDELRAKIRAMLMATL 904
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5UQF8 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4277997.1}))

HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 438/983 (44.56%), Postives = 580/983 (59.00%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYH----------HPIESIESELDLERYADLSYQQQEEEEDL----KTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVS---SLGSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEV--EDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EVVGRHAL FDDDA A+FVNS DALVEWNS+ IDRYDVRHLL+ P PP  R  H           P  ++E ELD ERY DL    +E E+D     +  +AGGY+ V FSYGN +E    K++D+      F P FPVP  L+  +PPTEKLHQIIARTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A    +  S  A++A +   +  ++S    A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A  +VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+ ++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S       S GS   S  Q+  QK   +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D E E   ED+ V+KHSR K R     H    H   R  HR   +S D D +   ++D   D K+     R  ++++D   +EH   R RK++R    S+D          +H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R   S K R+                            P+PE+E DLEEGEI  KV DQS+ S G  A+RE SVD S S Q  ++ SQP + TEVS+DLRAKIRAML+ T+
Sbjct:    1 MDLEVVGRHALFFDDDASASFVNSRDALVEWNSLFIDRYDVRHLLAGPLPPITRRRHLTRSSSSPPPQPDAALEFELDQERYLDLPSPSEEPEQDTGNDPEQADAGGYHTVGFSYGNPDEFTELKNNDTE---PVFQPAFPVPESLIQNLPPTEKLHQIIARTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVSASVPHGSEQIESSGNVAGKNDIVSKSSCIPL--KEKVSVIKHNRTVSTVKGGAISGTKKGSDASGLVSIAANKSLAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQEPKLPGKGLVSEKHESVGHAVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGISQGHSNEGGRDLSSGSLHTSQLQTSVQKEIFSGEPRIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKLSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEDKSVHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDRDSRHHHKNDSYDDEKHRHSRRRHKRNTSD---DEH---RPRKRNRHDSSSDD----------EHRISRRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSR---SGKHRK----------------------------PEPEKEADLEEGEIYTKV-DQSKASEGDHANREASVDFSKSHQIGRAPSQPSQATEVSDDLRAKIRAMLMATL 906
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4F8E2 ((Full=PREDICTED: splicing factor suppressor of {ECO:0000313|EMBL:VVA22831.1}))

HSP 1 Score: 642.884 bits (1657), Expect = 0.000e+0
Identity = 449/991 (45.31%), Postives = 589/991 (59.43%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYH----------HPIESIESELDLERYADLSYQQQEEEEDL----KTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENA-----LTSEE--NASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNS-EHVSSL--GSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDD---EEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EVVGRHAL FDDDA A+FVNS DALVEWNS+ IDRYDVRHLLS P PP  R  H           P  ++E ELD ERY DL    +E E+D     +  +AGGY+ V FSYGN +E    K++D+      F P FPVP  L+  +PPTEKLHQIIARTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A     L S E  NA S ++  H SE+  S  +I   A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A  +VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+S++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S E V  L  GS  AS  Q+  QK + +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D   E +E ED+  +KHSR K R     H    H   R  HR   +S DGD +   +HD   D K+     R  ++++D   +EH+ R+ R +H S   S+D          +H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R   S K R+                            P+PE+E DLEEGEI  KV DQS+ S G  A+RE  VD S S Q  ++ S P + TEVS+DLRAKIRAML+ T+
Sbjct:    1 MDLEVVGRHALFFDDDASASFVNSRDALVEWNSLFIDRYDVRHLLSGPLPPITRRRHLTRSSSSPPPQPDAALEFELDQERYLDLPSPSEEPEQDTGNDPEQADAGGYHTVGFSYGNPDEFTEQKNNDTE---PVFQPAFPVPESLIQNLPPTEKLHQIIARTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVNAVSASV-PHGSEQIESSGNI---AGKNDIVSKSPCIPL--KEKVNVIKHNRTVSTVKGGAISGTKKGSDAPGLVSTAANKSHAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQESKLPGKGLVSEKHESVGHVVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGIGQGHSNEGVRDLSSGSLHASQLQTSVQKENFSGEPRIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKNSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEEDKRGHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDGDSRRHRKHDSYDDEKHRHTRRRHKRNTSD---DEHQPRK-RNRHES--SSDD----------EHRISQRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSR---SGKHRK----------------------------PEPEKEADLEEGEIYTKV-DQSKASEGDHANREAFVDFSKSHQIGRAPSHPSQATEVSDDLRAKIRAMLMATL 910
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0HG50 ((SWAP (Suppressor-of-White-APricot)/surp domain-containing protein {ECO:0000313|EMBL:GFZ21961.1}))

HSP 1 Score: 642.884 bits (1657), Expect = 0.000e+0
Identity = 453/968 (46.80%), Postives = 593/968 (61.26%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYHH---PIESIESELDLERYADLSY--QQQEEEEDLKTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTER----GVGGGALSLLGSLYGFGDDDDAAVENALTSEENAS------SGAITAHMSEKTASVKSI--SIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEE--------KDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            MEMEVVGRH L FDDDA AAFVNS DALV+WNS+ IDRYDVRHLLS+PPPPRRR   H      SIESELD ER+ DL      QE +E  K    GGY+ VAFSYGN ++S   K+ D  L    F PPFPVP  L+  +PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVDH +LL S+   K +  K  G+E     GVG GAL LLGS+YG G+DD AAVEN+  S+E  S      SG    H SEKT +  ++    +A+  HP        +  K+KV + +RNSF S  K G  + +R+E D +   SA     Q S +   S     ++EPPS++K+++ KIVEFIM+NGKQFEAVL+EQDS+HGRFPFL+ SNQY+ YY+K+L++AQ+S+++G++ + EKDGS ++   KKT + K    +  S + +IP+D DRK+KFKMVIGKSK DG DPP KA Q Q  V VDAAAAAAILQAAT+G + PN   LS +SLN                         KS +    A EAA EA+S E++LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE S   S EP   +GV + G    D + +EREG   PL++  ++ IE    K+S DE +ER+ RRKYRS S + +  ++  +++         +KHSR KHR  +        +D  E+ HR++R+ H+S  +SH+ D K++ E  DE+DHK+SRK HRS++SS++ D++E  +     KH   +  +        D+  H   K+ H SSK+ +                 SRH  +  S     H HR  +S   + S     H+    EE  +C                         K+SD+SRGS G G  RE S+D+SSS+QD ++ SQPLE TEV ++LRAKIRAML+ T+
Sbjct:    1 MEMEVVGRHVLFFDDDATAAFVNSGDALVDWNSLLIDRYDVRHLLSAPPPPRRRRNPHSPPSASSIESELDRERFLDLPSPSDDQELDERAKPDVPGGYHNVAFSYGNTDDSTDQKNPDDGLGDLGFQPPFPVPESLLQSLPPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQDLLQSDVDGKSEAAKKGGSEGSQTDGVGAGALFLLGSVYGSGEDD-AAVENSPESKETVSGKTFDASGPTVCHASEKTETSGNLDDKDEAVGKHP--------SPRKEKVVIPRRNSFLSAPKFGKLNSKRREGDPIGLLSAAMDEPQPSALPNISQVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLVEQDSKHGRFPFLIPSNQYHPYYVKVLQKAQESKLNGKSFISEKDGSMVNELDKKTYLSKEIDLASGSTDYDIPYDGDRKEKFKMVIGKSKKDGQDPPYKANQPQFGVNVDAAAAAAILQAATRGTKNPNFGILSSTSLN-----------------------GDKSAKTA--ALEAANEADSSESHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPSRSLSVEPQG-TGVSSSGDGVVDLSGKEREGIYVPLDVNTSDKIEKYEKKYS-DENHERRLRRKYRSRSGRCEEEEEEEEED---------HKHSRKKHRSHQSSREEGKEEDEEEREHRYARKKHQSYCSSHEEDGKEDGE--DERDHKHSRKKHRSHRSSHENDKDEDYEDGRHHKHSKKKHRSHRSSRHSRDRHKH---KELHSSSKNKE-----------------SRHRRKQESSSDDEHLHRSSSSRHCKIS-----HSEEELEEGEICY------------------------KISDRSRGSVGAGISREDSLDLSSSYQDGRAPSQPLEATEVPDELRAKIRAMLMATL 871
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M5WM37 ((Uncharacterized protein {ECO:0000313|EMBL:EMJ14857.1}))

HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0
Identity = 446/989 (45.10%), Postives = 587/989 (59.35%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYH----------HPIESIESELDLERYADLSYQQQEEEE--DLKTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENA-----LTSEE--NASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVS---SLGSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDD---EEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EVVGRHAL FDDDA A+FVNS DALVEWNS+ IDRYDVRHLLS P PP  R  H           P  ++E ELD ERY DL    +E E+  D +  +AGGY+ V FSYGN +E    K++D+      F P FPVP  L+  +PPTEKLHQII+RTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A     L S E  NA S ++  H SE+  S  +I   A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A  +VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+S++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S       S GS   S  Q+  QK + +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D   E +E ED+  +KHSR K R     H    H   R  HR   +S DGD +   +HD   D K+     R  ++++D   +EH+ R+ R +H S   S+D          +H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R   S K R+                            P+PE+E DLEEGEI  KV DQS+ S G  A+RE  VD S S Q  ++ SQP + TEVS+DLRAKIRAML+ T+
Sbjct:    1 MDLEVVGRHALFFDDDASASFVNSRDALVEWNSLFIDRYDVRHLLSGPLPPITRRRHLTRSSSSPPPQPDAALEFELDQERYLDLPSPSEEPEQGNDPEQADAGGYHTVGFSYGNPDEFTEQKNNDTE---PVFQPAFPVPESLIQNLPPTEKLHQIISRTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVNAVSASV-PHGSEQIESSGNI---AGKNDIVSKSPCIPL--KEKVNVIKHNRTVSTVKGGAISGTKKGSDASGLVSTAANKSHAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQESKLPGKGLVSEKHESVGHVVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGIGQGHSNEGGRDLSSGSLHTSQLQTSVQKENFSGEPHIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKHSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEEDKRGHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDGDSRRHRKHDSYDDEKHRHTRRRHKRNTSD---DEHQPRK-RNRHES--SSDD----------EHRISRRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSR---SGKHRK----------------------------PEPEKEADLEEGEIYTKV-DQSKASEGDHANREAFVDFSKSHQIGRAPSQPSQATEVSDDLRAKIRAMLMATL 908
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251PP89 ((Uncharacterized protein {ECO:0000313|EMBL:ONI13367.1}))

HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0
Identity = 446/991 (45.01%), Postives = 587/991 (59.23%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYH----------HPIESIESELDLERYADLSYQQQEEEEDL----KTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENA-----LTSEE--NASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVS---SLGSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDD---EEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EVVGRHAL FDDDA A+FVNS DALVEWNS+ IDRYDVRHLLS P PP  R  H           P  ++E ELD ERY DL    +E E+D     +  +AGGY+ V FSYGN +E    K++D+      F P FPVP  L+  +PPTEKLHQII+RTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A     L S E  NA S ++  H SE+  S  +I   A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A  +VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+S++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S       S GS   S  Q+  QK + +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D   E +E ED+  +KHSR K R     H    H   R  HR   +S DGD +   +HD   D K+     R  ++++D   +EH+ R+ R +H S   S+D          +H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R   S K R+                            P+PE+E DLEEGEI  KV DQS+ S G  A+RE  VD S S Q  ++ SQP + TEVS+DLRAKIRAML+ T+
Sbjct:    1 MDLEVVGRHALFFDDDASASFVNSRDALVEWNSLFIDRYDVRHLLSGPLPPITRRRHLTRSSSSPPPQPDAALEFELDQERYLDLPSPSEEPEQDTGNDPEQADAGGYHTVGFSYGNPDEFTEQKNNDTE---PVFQPAFPVPESLIQNLPPTEKLHQIISRTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVNAVSASV-PHGSEQIESSGNI---AGKNDIVSKSPCIPL--KEKVNVIKHNRTVSTVKGGAISGTKKGSDASGLVSTAANKSHAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQESKLPGKGLVSEKHESVGHVVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGIGQGHSNEGGRDLSSGSLHTSQLQTSVQKENFSGEPHIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKHSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEEDKRGHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDGDSRRHRKHDSYDDEKHRHTRRRHKRNTSD---DEHQPRK-RNRHES--SSDD----------EHRISRRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSR---SGKHRK----------------------------PEPEKEADLEEGEIYTKV-DQSKASEGDHANREAFVDFSKSHQIGRAPSQPSQATEVSDDLRAKIRAMLMATL 910
[Close]
BLAST of XM_017402156.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5S138 ((splicing factor, suppressor of white-apricot homolog {ECO:0000313|RefSeq:XP_021809259.1}))

HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0
Identity = 444/991 (44.80%), Postives = 582/991 (58.73%), Query Frame = 0
 
Query:    1 MEMEVVGRHALLFDDDAMAAFVNSTDALVEWNSIPIDRYDVRHLLSSPPPPRRRNYH----------HPIESIESELDLERYADLSYQQQEEEEDL----KTVNAGGYNAVAFSYGNEEESAFHKDSDSRLKSSAFCPPFPVPVDLV--IPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENA-----LTSEE--NASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVS---SLGSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDD---EEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 929
            M++EVVGRHAL FDDDA A+FVNS DALVEWNS+ IDRYDVRHLLS P PP  R  H           P  ++E ELD ERY DL    +E E+D     +  +AGGY+ + FSYGN +E    K++D+      F P FPVP  L+  +PPTEKLHQIIARTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A     L S E  NA S A++A +   +  ++S    A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A   VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+S++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S       S GS   S  Q+  QK   +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D   E +E ED+  +KHSR K R     H    H   R  HR   +S D D +   +HD   D K+     R  ++++D   +EH+ R+ R +H    CS+D DE        H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R     K                               P PE+E DLEEGEI  KV DQS+ S G  A+RE SVD S S Q  ++ SQP + TEVS+DLRAKIRAML+ T+
Sbjct:    1 MDLEVVGRHALFFDDDASASFVNSRDALVEWNSLSIDRYDVRHLLSGPLPPITRRRHLTRSSSSPPPQPDAALEFELDQERYLDLPSPSEEPEQDTGNDPEQADAGGYHTIGFSYGNPDEFTEQKNNDTE---PVFQPAFPVPESLIQNLPPTEKLHQIIARTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVNAVS-AVSASVPHGSEQIESSGNVAGKNDVVSKSTCIPL--KEKVNVIKHNRTVSTVKGGAISGTKKGSDASGSVSTAANKSHAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQESKLPGKGLVSEKHESVGHVVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGIGQGHSNEGGRDLSSGSLHTSQLQTSVQKEKNSGEPRIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKLSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEEDKRGHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDRDSRHHRKHDSYDDEKHRHSRRRHKRNTSD---DEHQPRK-RNRH---DCSSD-DE--------HRISRRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSRLGKHRK-------------------------------PVPEKEADLEEGEIYTKV-DQSKASEGDHANREASVDFSKSHQIGRAPSQPSQATEVSDDLRAKIRAMLMSTL 913
Match NameStatsDescription
A0A5B6ZBQ8E-Value: 0.000e+0, PID: 49.60(Uncharacterized protein {ECO:0000313|EMBL:MPA4144... [more]
A0A2R6QDB5E-Value: 0.000e+0, PID: 49.06(Splicing factor, suppressor of white-apricot like... [more]
A0A6I9ULU7E-Value: 0.000e+0, PID: 46.40(protein SWAP isoform X1 {ECO:0000313|RefSeq:XP_01... [more]
A0A7J0G2E2E-Value: 0.000e+0, PID: 47.65(SWAP (Suppressor-of-White-APricot)/surp domain-co... [more]
A0A6J5UQF8E-Value: 0.000e+0, PID: 44.56(Uncharacterized protein {ECO:0000313|EMBL:CAB4277... [more]
A0A5E4F8E2E-Value: 0.000e+0, PID: 45.31(Full=PREDICTED: splicing factor suppressor of {EC... [more]
A0A7J0HG50E-Value: 0.000e+0, PID: 46.80(SWAP (Suppressor-of-White-APricot)/surp domain-co... [more]
M5WM37E-Value: 0.000e+0, PID: 45.10(Uncharacterized protein {ECO:0000313|EMBL:EMJ1485... [more]
A0A251PP89E-Value: 0.000e+0, PID: 45.01(Uncharacterized protein {ECO:0000313|EMBL:ONI1336... [more]
A0A6P5S138E-Value: 0.000e+0, PID: 44.80(splicing factor, suppressor of white-apricot homo... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.