XM_017402160.1

Resource Type: 
Polypeptide
Name: 
XM_017402160.1
Identifier: 
XM_017402160.1-protein
Sequence: 
MQPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLH
SYFRYLVDHSELLHSEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDD
AAVENALTSEENASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPA
KPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTP
TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQ
YYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLES
AECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAI
LQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSD
ENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIK
TESSHGTSSEPCNLSGVDAEGDRAAREREGSSAPLEIGATENIESAANKF
STDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRK
EEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSY
KSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSS
KSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQ
RQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGS
AGGAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM
Sequence Length: 
797
Sequence Checksum: 
b8678693002e35648dbaf135be5b69fb
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402160.1, derives from mRNA, XM_017402160.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZBQ8 ((Uncharacterized protein {ECO:0000313|EMBL:MPA41449.1}) (Fragment))

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 411/840 (48.93%), Postives = 535/840 (63.69%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTERG----VGGGALSLLGSLYGFGDDDDAAVENALTSEENASS------GAITAHMSEKT--ASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTSM----VEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEH------VSSLGSSRASHPQSVAQKSDENGAR--------------AREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSE--PCNLSGVDAE-GDRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKST--DDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEK+HQIIARTA++VSKHG QSEIVLRVKQGDNPTFGFL+P HHLH+YFR+LVDH EL+  +   KPQND  + TE      VGGGALSLLGS+YG+G+D+D A E+A  S+EN S        A  +H SEKT    +++    A S HP  S        K+K   LKRNSF S SKAG+ +  +K  D++ S SA      S+  T + +    +EPP ++K+++ +IVEFI+KNGKQFEAVLIEQDS+HGRFPFLL SNQY+ YY K+L++AQ+S+++G++ + EKD S  HG  KKT   K    SL   + C++P+D DRK+KFKMVIGKSK DG DPPSKA QQQ  V VDAAAAAAILQAAT+GI+ PNL  LS +SLN   N+  H       SSLGS  +S P+SV QKSD+NG +              A E A EA+S EA LTREQKLKAERL+RAKMFV+M+KSG  P +KTE S G S E      SG  AE  + A +EREGSS PL++  ++  E +  K+S DEYNER+ RRKYRS S +                              ++ D  EK H+HS +   S  +SHD  ++ E     E+D K+SRK HRSY+SS  EDEEE                           RDHK+S+K HRS  S+  D+++++E  D +  +K    H S HHSRD+H+H+ +RH+SSK+  S++ ++H+ TS +E+     SD+   +    ERE+LEEGEIS+++SDQSRGS G  A RE S D+ +S+QD ++ S+P E TEVS+DLRAKIRAML+ T+
Sbjct:  191 PPTEKMHQIIARTAMFVSKHGGQSEIVLRVKQGDNPTFGFLIPGHHLHAYFRFLVDHQELMQYDIDGKPQNDNKTNTEHNQTDDVGGGALSLLGSVYGYGEDEDGAGEDASESKENVSWEKFDAVSAAVSHGSEKTDFPVIEAGKEGAASKHPRTSS-------KEKAPALKRNSFISASKAGTTTSTKK-GDTLSSISAVDKSQVSAMPTMSKIEPLVLEPPFDLKRLVDRIVEFILKNGKQFEAVLIEQDSKHGRFPFLLPSNQYHPYYQKVLQKAQESKLAGKSFLSEKDDSVGHGPDKKTSRSKEESDSLSLGSGCDMPYDSDRKEKFKMVIGKSKKDGQDPPSKATQQQFGVSVDAAAAAAILQAATRGIKNPNLGILSSTSLN--GNSHMHSSEGGQASSLGSHLSSQPESVIQKSDQNGKQCVSVPVAKAIAKTAALEVASEADSSEARLTREQKLKAERLKRAKMFVSMLKSGDVP-LKTEPSRGISVERQESGFSGSGAEIVNLAGKEREGSSVPLDVDTSDKNEKSEKKYSDDEYNERRLRRKYRSRSMR--------------------------DEDDDDDDKEEKDHKHSMKKQLSPCSSHDDGKEGE-----ERDRKHSRKKHRSYRSSR-EDEEE---------------------------RDHKHSRKKHRSHHSSREDEEEDEEENDHKHSRKKHRSHRSSHHSRDTHKHR-KRHSSSKEMGSRQWHKHDSTSDDEHQHDKESDKRRKK-SHSEREELEEGEISSRISDQSRGSVGDVACREVSPDLLNSYQDGRAPSRPSETTEVSDDLRAKIRAMLMATL 958    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZBD0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA41450.1}))

HSP 1 Score: 541.191 bits (1393), Expect = 2.020e-179
Identity = 401/834 (48.08%), Postives = 532/834 (63.79%), Query Frame = 0
 
Query:    8 LHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTERG----VGGGALSLLGSLYGFGDDDDAAVENALTSEENASS------GAITAHMSEKT--ASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTSM----VEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEH------VSSLGSSRASHPQSVAQKSDENGAR--------------AREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSE--PCNLSGVDAE-GDRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHR-RHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            +HQIIARTA++VSKHG QSEIVLRVKQGDNPTFGFL+P HHLH+YFR+LVDH EL+  +   KPQND  + TE      VGGGALSLLGS+YG+G+D+D A E+A  S+EN S        A  +H SEKT    +++    A S HP  S        K+K   LKRNSF S SKAG+ +  +K  D++ S  A      S+  T + +    +EPP ++K+++ +IVEFI+KNGKQFEAVLIEQDS+HGRFPFLL SNQY+ YY K+L++AQ+S+++G++ + EKD S  HG  KKT   K    SL   + C++P+D DRK+KFKMVIGKSK DG DPPSKA QQQ  V VDAAAAAAILQAAT+GI+ PNL  LS +SLN   N+  H       SSLGS  +S P+SV QKSD+NG +              A E A EA+S EA LTREQKLKAERL+RAKMFV+M+KSG  P +KTE S G S E      SG  AE  + A +EREGSS PL++  ++  E +  K+S DEYNER+ RRKYRS S + D   D  D EE + +  +  + S      + K+  E+  +HSR+ HRS R+S + +E        E+DHK+SRK HRS+ SS +++EE+ E+R                          K+S+K HRS  S+ +++E++ E+   +   +     R        HKHR RH+SSK+  S++ ++H+ TS +E+     SD+   +    ERE+LEEGEIS+++SDQSRGS G  A RE S D+ +S+QD ++ S+P E TEVS+DLRAKIRAML+ T+
Sbjct:    1 MHQIIARTAMFVSKHGGQSEIVLRVKQGDNPTFGFLIPGHHLHAYFRFLVDHQELMQYDIDGKPQNDNKTNTEHNQTDDVGGGALSLLGSVYGYGEDEDGAGEDASESKENVSWEKFDAVSAAVSHGSEKTDFPVIEAGKEGAASKHPRTSS-------KEKAPALKRNSFISASKAGTTTSTKK-GDTLSSIFAVDKSQVSAMPTMSKIEPLVLEPPFDLKRLVDRIVEFILKNGKQFEAVLIEQDSKHGRFPFLLPSNQYHPYYQKVLQKAQESKLAGKSFLSEKDDSVGHGPDKKTSRSKEESDSLSLGSGCDMPYDSDRKEKFKMVIGKSKKDGQDPPSKATQQQFGVSVDAAAAAAILQAATRGIKNPNLGILSSTSLN--GNSHMHSSEGGQASSLGSHLSSQPESVIQKSDQNGKQCVSVPVAKAIAKTAALEVASEADSSEARLTREQKLKAERLKRAKMFVSMLKSGDVP-LKTEPSRGISVERQESGFSGSGAEIVNLAGKEREGSSVPLDVDTSDKNEKSEKKYSDDEYNERRLRRKYRSRSMR-DEDDDDDDKEEKDHKHSMKKQLSPCSSHDDGKEGEERDRKHSRKKHRSYRSSREDEE--------ERDHKHSRKKHRSHHSSREDEEEDGEERDL------------------------KHSRKKHRSRHSSRENEEEDEEENDHKHSRKKHRSHRSSHHSRDTHKHRKRHSSSKEMGSRQWHKHDSTSDDEHQHDKESDKRRKK-SHSEREELEEGEISSRISDQSRGSVGDVACREVSPDLLNSYQDGRAPSRPSETTEVSDDLRAKIRAMLMATL 789    

HSP 2 Score: 39.2762 bits (90), Expect = 3.789e+0
Identity = 20/76 (26.32%), Postives = 40/76 (52.63%), Query Frame = 0
 
Query:    1 MQPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEEKPQNDKISG 76
            ++PP + L +++ R   ++ K+G Q E VL  +   +  F FL+P +  H Y++ ++         +K Q  K++G
Sbjct:  207 LEPPFD-LKRLVDRIVEFILKNGKQFEAVLIEQDSKHGRFPFLLPSNQYHPYYQKVL---------QKAQESKLAG 272    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZBX9 ((Uncharacterized protein {ECO:0000313|EMBL:MPA41451.1}))

HSP 1 Score: 538.11 bits (1385), Expect = 2.522e-178
Identity = 400/835 (47.90%), Postives = 528/835 (63.23%), Query Frame = 0
 
Query:    8 LHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSE--EKPQNDKISGTERG----VGGGALSLLGSLYGFGDDDDAAVENALTSEENASS------GAITAHMSEKT--ASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTSM----VEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEH------VSSLGSSRASHPQSVAQKSDENGAR--------------AREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSE--PCNLSGVDAE-GDRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHED--RRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            +HQIIARTA++VSKHG QSEIVLRVKQGDNPTFGFL+P HHLH+YFR+LVDH EL+  +   KPQND  + TE      VGGGALSLLGS+YG+G+D+D A E+A  S+EN S        A  +H SEKT    +++    A S HP  S        K+K   LKRNSF S SKAG+ +  +K  D++ S  A      S+  T + +    +EPP ++K+++ +IVEFI+KNGKQFEAVLIEQDS+HGRFPFLL SNQY+ YY K+L++AQ+S+++G++ + EKD S  HG  KKT   K    SL   + C++P+D DRK+KFKMVIGKSK DG DPPSKA QQQ  V VDAAAAAAILQAAT+GI+ PNL  LS +SLN   N+  H       SSLGS  +S P+SV QKSD+NG +              A E A EA+S EA LTREQKLKAERL+RAKMFV+M+KSG  P +KTE S G S E      SG  AE  + A +EREGSS PL++  ++  E +  K+S DEYNER+ RRKYRS S + D   D  D EE + +  +  + S      + K+  E+  +HSR+ HRS R+S + +E        E+DHK+SRK HRS+ SS +++E+  E   +  RKKHRS   S + +E E ++   H   K     S     D                          +H+H+ +RH+SSK+  S++ ++H+ TS +E+     SD+   +    ERE+LEEGEIS+++SDQSRGS G  A RE S D+ +S+QD ++ S+P E TEVS+DLRAKIRAML+ T+
Sbjct:    1 MHQIIARTAMFVSKHGGQSEIVLRVKQGDNPTFGFLIPGHHLHAYFRFLVDHQELMQYDIDGKPQNDNKTNTEHNQTDDVGGGALSLLGSVYGYGEDEDGAGEDASESKENVSWEKFDAVSAAVSHGSEKTDFPVIEAGKEGAASKHPRTSS-------KEKAPALKRNSFISASKAGTTTSTKK-GDTLSSIFAVDKSQVSAMPTMSKIEPLVLEPPFDLKRLVDRIVEFILKNGKQFEAVLIEQDSKHGRFPFLLPSNQYHPYYQKVLQKAQESKLAGKSFLSEKDDSVGHGPDKKTSRSKEESDSLSLGSGCDMPYDSDRKEKFKMVIGKSKKDGQDPPSKATQQQFGVSVDAAAAAAILQAATRGIKNPNLGILSSTSLN--GNSHMHSSEGGQASSLGSHLSSQPESVIQKSDQNGKQCVSVPVAKAIAKTAALEVASEADSSEARLTREQKLKAERLKRAKMFVSMLKSGDVP-LKTEPSRGISVERQESGFSGSGAEIVNLAGKEREGSSVPLDVDTSDKNEKSEKKYSDDEYNERRLRRKYRSRSMR-DEDDDDDDKEEKDHKHSMKKQLSPCSSHDDGKEGEERDRKHSRKKHRSYRSSREDEE--------ERDHKHSRKKHRSHHSSREDEEDGEERDLKHSRKKHRSRHSSRENEEDEEENDHKHSRKKHRSHRSSHHSRD--------------------------THKHR-KRHSSSKEMGSRQWHKHDSTSDDEHQHDKESDKRRKK-SHSEREELEEGEISSRISDQSRGSVGDVACREVSPDLLNSYQDGRAPSRPSETTEVSDDLRAKIRAMLMATL 787    

HSP 2 Score: 39.2762 bits (90), Expect = 3.787e+0
Identity = 20/76 (26.32%), Postives = 40/76 (52.63%), Query Frame = 0
 
Query:    1 MQPPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEEKPQNDKISG 76
            ++PP + L +++ R   ++ K+G Q E VL  +   +  F FL+P +  H Y++ ++         +K Q  K++G
Sbjct:  207 LEPPFD-LKRLVDRIVEFILKNGKQFEAVLIEQDSKHGRFPFLLPSNQYHPYYQKVL---------QKAQESKLAG 272    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5UQF8 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4277997.1}))

HSP 1 Score: 516.924 bits (1330), Expect = 1.426e-168
Identity = 363/833 (43.58%), Postives = 487/833 (58.46%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVS---SLGSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEV--EDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEKLHQIIARTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A    +  S  A++A +   +  ++S    A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A  +VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+ ++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S       S GS   S  Q+  QK   +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D E E   ED+ V+KHSR K R     H    H   R  HR   +S D D +   ++D   D K+     R  ++++D   +EH   R RK++R    S+D          +H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R   S K R+                            P+PE+E DLEEGEI  KV DQS+ S G  A+RE SVD S S Q  ++ SQP + TEVS+DLRAKIRAML+ T+
Sbjct:  148 PPTEKLHQIIARTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVSASVPHGSEQIESSGNVAGKNDIVSKSSCIPL--KEKVSVIKHNRTVSTVKGGAISGTKKGSDASGLVSIAANKSLAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQEPKLPGKGLVSEKHESVGHAVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGISQGHSNEGGRDLSSGSLHTSQLQTSVQKEIFSGEPRIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKLSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEDKSVHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDRDSRHHHKNDSYDDEKHRHSRRRHKRNTSD---DEH---RPRKRNRHDSSSDD----------EHRISRRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSR---SGKHRK----------------------------PEPEKEADLEEGEIYTKV-DQSKASEGDHANREASVDFSKSHQIGRAPSQPSQATEVSDDLRAKIRAMLMATL 906    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0G2E2 ((SWAP (Suppressor-of-White-APricot)/surp domain-containing protein {ECO:0000313|EMBL:GFZ04942.1}))

HSP 1 Score: 514.998 bits (1325), Expect = 8.153e-168
Identity = 386/814 (47.42%), Postives = 520/814 (63.88%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEE--KPQNDKISGTER----GVGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSI--SIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVD+ +LL S+   K + +K  G+E     GVG GAL LLGS YG G+D+DAAVEN+  S+E +       H S KT +  ++    +A+  HP        + PK+KV +LKRNSFTS  K+G  ++ RKE D +   S    + Q S     S     ++EPPS++K+++ KIVEFIM+NGKQFEAVLIEQDS+HG+FPFLL  NQY+ YY+K+L++AQ+S+++G++ + EKDGS ++G  KKT + K + SS   S  C+IP+D DRK+KFKMVIGK K DG DPP KA Q Q  V VDAAAAAAILQAAT+G + PN   LS +SLN  D+ SE          S P  VA+   +    A EAA EA+S EA+LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE     S EP   +GV + G    D A +ERE  S PL++  ++ IE +  K+S DE +ER+ RRKYRS S + +                        +  +EE++  E+ H+HSR+ HRS R+S    E+ + E ++E++H+Y+RK H SY SS +ED                          G+D+RDHK+S+K HRS +   D+D ++    +  KK    H S  HSRD H+HK  RH SSK++ES+ + +   +S +E+ L   S+  + ++     E+LEEGEI +K+SD+SRGS G G  RE S+D+SSS Q+ ++ SQP   TEV ++LRAKIRAML+ T+
Sbjct:  165 PPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDNQDLLRSDVDGKSEAEKKGGSEGNQTDGVGAGALFLLGSFYGSGEDEDAAVENSSESKETS-----FFHASGKTETPGNLYGKDEAIGKHP--------SPPKEKVLILKRNSFTSAPKSGKLNNTRKEGDRIDLLSGAVDKPQPSAPPNISHVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLIEQDSKHGKFPFLLPPNQYHPYYVKVLQKAQESKLNGKSFISEKDGSVVNGLDKKTHLSKETDSSASGSTCCDIPYDGDRKEKFKMVIGKLKKDGQDPPYKANQPQFGVNVDAAAAAAILQAATRGTKNPNFGILSSTSLN--DDKSEQ-----KRDRSDPVPVAKAIAKTA--ALEAANEADSSEAHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPLRSLSVEPQG-TGVSSSGDGVVDLAGKERESISVPLDVNTSDKIEKSEKKYS-DENHERRLRRKYRSRSGRCEEE-----------------GEEEEEEEEEEEEEEEEDHKHSRKKHRSHRSSR---EEGKEEDEEEREHRYARKKHWSYHSSREED--------------------------GEDERDHKHSRKKHRSHEDDKDEDCEDDGHHKHSKKKHRSHRSSRHSRDRHKHK-ERHFSSKNKESRHRRKQERSSDDEH-LRRSSNSRHRKISH-SEEELEEGEICSKISDRSRGSVGTGISREASLDLSSSCQEGRAPSQPSVATEVPDELRAKIRAMLMATL 904    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0HG50 ((SWAP (Suppressor-of-White-APricot)/surp domain-containing protein {ECO:0000313|EMBL:GFZ21961.1}))

HSP 1 Score: 513.457 bits (1321), Expect = 1.276e-167
Identity = 369/827 (44.62%), Postives = 498/827 (60.22%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEE--KPQNDKISGTE----RGVGGGALSLLGSLYGFGDDDDAAVENALTSEENAS------SGAITAHMSEKTASVKSISI--DALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEE--------KDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVDH +LL S+   K +  K  G+E     GVG GAL LLGS+YG G+DD AAVEN+  S+E  S      SG    H SEKT +  ++    +A+  HP        +  K+KV + +RNSF S  K G  + +R+E D +   SA     Q S +   S     ++EPPS++K+++ KIVEFIM+NGKQFEAVL+EQDS+HGRFPFL+ SNQY+ YY+K+L++AQ+S+++G++ + EKDGS ++   KKT + K    +  S + +IP+D DRK+KFKMVIGKSK DG DPP KA Q Q  V VDAAAAAAILQAAT+G + PN   LS +SLN                         KS +    A EAA EA+S E++LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE S   S EP   +GV + G    D + +EREG   PL++  ++ IE    K+S DE +ER+ RRKYRS S + +  ++  +++         +KHSR KHR  +        +D  E+ HR++R+ H+S  +SH+ D K++ E  DE+DHK+SRK HRS++SS++ D++E  +     KH   +  +        D+  H   K+ H SSK+ +                 SRH  +  S     H HR  +S   + S     H+    EE  +C                         K+SD+SRGS G G  RE S+D+SSS+QD ++ SQPLE TEV ++LRAKIRAML+ T+
Sbjct:  142 PPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQDLLQSDVDGKSEAAKKGGSEGSQTDGVGAGALFLLGSVYGSGEDD-AAVENSPESKETVSGKTFDASGPTVCHASEKTETSGNLDDKDEAVGKHP--------SPRKEKVVIPRRNSFLSAPKFGKLNSKRREGDPIGLLSAAMDEPQPSALPNISQVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLVEQDSKHGRFPFLIPSNQYHPYYVKVLQKAQESKLNGKSFISEKDGSMVNELDKKTYLSKEIDLASGSTDYDIPYDGDRKEKFKMVIGKSKKDGQDPPYKANQPQFGVNVDAAAAAAILQAATRGTKNPNFGILSSTSLN-----------------------GDKSAKTA--ALEAANEADSSESHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPSRSLSVEPQG-TGVSSSGDGVVDLSGKEREGIYVPLDVNTSDKIEKYEKKYS-DENHERRLRRKYRSRSGRCEEEEEEEEED---------HKHSRKKHRSHQSSREEGKEEDEEEREHRYARKKHQSYCSSHEEDGKEDGE--DERDHKHSRKKHRSHRSSHENDKDEDYEDGRHHKHSKKKHRSHRSSRHSRDRHKH---KELHSSSKNKE-----------------SRHRRKQESSSDDEHLHRSSSSRHCKIS-----HSEEELEEGEICY------------------------KISDRSRGSVGAGISREDSLDLSSSYQDGRAPSQPLEATEVPDELRAKIRAMLMATL 871    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P5C7 ((Splicing factor, suppressor of white-apricot like {ECO:0000313|EMBL:PSR85319.1}))

HSP 1 Score: 513.457 bits (1321), Expect = 1.336e-167
Identity = 368/826 (44.55%), Postives = 502/826 (60.77%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEE--KPQNDKISGTE----RGVGGGALSLLGSLYGFGDDDDAAVENALTSEENAS------SGAITAHMSEKTASVKSISI--DALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEE--------KDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAGGAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVDH +LL S+   K +  K  G+E     GVG GAL LLGS+YG G+DD AAVEN+  S+E  S      SG    H SEKT +  ++    +A+  HP        +  ++KV +L+RNSF S  K G  + +RKE D +   SA     Q S +   S     ++EPPS++K+++ KIVEFIM+NGKQFEAVL+EQDS+HGRFPFL+ SNQY+ YY+K+L++AQ+S+++G++ + EKDGS ++   KKT + K +  +  S + +IP+D DRK+KFKMVIGKSK DG DPP KA Q Q  V VDAAAAAAILQAAT+G + PN   LS +SLN  D+ S   ++L                       EAA EA+S E++LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE S   S EP   +GV + G    D + +EREG   PL++  ++ IE    K+S DE ++R+ RRKY S S +    +   ++EE+E ED   +KHSR KHR  +        +D  E+ HR++R+ H+S  +SH+ + K++ E  DE+DHK+SRK HRS++SS++ D++E                   D  +G   +  K   + HRSS+ + D           R KH+  H S  +    HR   R+  SS D E  R++    +S     +C   +E        +  D   G + A +S           RE S+D+SSS+QD ++ SQP E TEV ++LRAKIRAML+ T+
Sbjct:  140 PPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQDLLQSDVDGKSEAAKKGGSEGSQTDGVGAGALFLLGSVYGSGEDD-AAVENSPESKETVSGKTFDASGPTVCHASEKTETSGNLDGKDEAVGKHP--------SPREEKVVILRRNSFLSAPKFGKLNRKRKEGDPIGLLSAAMDEPQPSALPNISQVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLVEQDSKHGRFPFLIPSNQYHPYYVKVLQKAQESKLNGKSFISEKDGSVVNELDKKTYLSKETDPASGSTDYDIPYDGDRKEKFKMVIGKSKKDGQDPPYKANQPQFGVNVDAAAAAAILQAATRGTKNPNFGILSSTSLN--DDKSAKTAAL-----------------------EAANEADSSESHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPSRSLSVEPQG-TGVSSSGDGVVDLSGKEREGIYVPLDVNTSDKIEKYEKKYS-DENHKRRLRRKYHSRSGR--CEEVGEEEEEEEEED---HKHSRKKHRSHQSSREEGKEEDEEEREHRYARKKHQSYCSSHEENGKEDGE--DERDHKHSRKKHRSHRSSHENDKDE-------------------DYEDGRHHKHSKKKHRSHRSSRHSRD-----------RHKHKELHSSSKNKESRHR---RKQESSSDDEHLRRS----SSSRHWKICHSEEELEEGEICYKISDRSRGSVGAGIS-----------REDSLDLSSSYQDGRAPSQPSEATEVPDELRAKIRAMLMATL 873    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4F8E2 ((Full=PREDICTED: splicing factor suppressor of {ECO:0000313|EMBL:VVA22831.1}))

HSP 1 Score: 509.99 bits (1312), Expect = 8.472e-166
Identity = 373/841 (44.35%), Postives = 496/841 (58.98%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLH--------SEEKPQNDKISGTERGVGGGALSLLGSLYGFGDDDDAAVENA-----LTSEE--NASSGAITAHMSEKTASVKSISIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAG--SGSDRRKEADSVVSHSATTSRSQSSFVTP---TSMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNS-EHVSSL--GSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEGDR----AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDD---EEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPERE-DLEEGEISAKVSDQSRGSAGG-AHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEKLHQIIARTA +VSKHG QSEI+LRVKQGDNPTFGFLMPDHHLH+YFR+LVDH ELL          EEK  +  I  T     GGALSLLGS+YG G+D+D  +E+A     L S E  NA S ++  H SE+  S  +I   A  N  V+    +P   K+KV V+K N   S  K G  SG+ +  +A  +VS +A  S + +   TP     ++EPP + KK++ KIVEFI+KNG++FEAVLIEQ+ +HGRF FL+ SNQY+ YYL +L++AQ+S++ G+  V EK  S  H   KKT   +G  +S  SA  ++PFD+DRK+KFKMVI K K DG DPPSKA + QS V +D   AAAILQAAT+GI+ P L+   +SS      +S E V  L  GS  AS  Q+  QK + +G                A  AA EA+S EA+LTREQKLKAERL+RAKMF AMIKSGSAP +K+ES  G S+EP   SG+ + G+     +A+EREGSS PLE   ++ +E    K S D+ NER+++R YR+ S +H+  ++  +D   E +E ED+  +KHSR K R     H    H   R  HR   +S DGD +   +HD   D K+     R  ++++D   +EH+ R+ R +H S   S+D          +H+ S++ ++ S S+DD+           + +R RH   + S D H H+ R   S K R+                            P+PE+E DLEEGEI  KV DQS+ S G  A+RE  VD S S Q  ++ S P + TEVS+DLRAKIRAML+ T+
Sbjct:  148 PPTEKLHQIIARTATFVSKHGGQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELLEYDTDGKSLDEEKKADGGIDQT-----GGALSLLGSVYGSGEDEDGIIEDAPELGKLKSVEAVNAVSASV-PHGSEQIESSGNI---AGKNDIVSKSPCIPL--KEKVNVIKHNRTVSTVKGGAISGTKKGSDAPGLVSTAANKSHAPAMPSTPKVELPILEPPPDQKKVVEKIVEFILKNGREFEAVLIEQNCKHGRFLFLMPSNQYHSYYLTVLQKAQESKLPGKGLVSEKHESVGHVVDKKT-AKEGDTASSGSAGHDLPFDYDRKEKFKMVISKLKKDGHDPPSKASEPQSGVSLD--TAAAILQAATRGIKNPGLEIFPKSSSGIGQGHSNEGVRDLSSGSLHASQLQTSVQKENFSGEPRIPVPVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGSAP-LKSESLRGLSAEPPE-SGISSSGNEVVNLSAKEREGSSVPLEADISDKVEEFEKKNSVDDCNERRSKRSYRARSKRHEGEEESDNDLEQEAEEEEDKRGHKHSRKKRRS----HHSSEHSRDRHKHRRHSSSKDGDSRRHRKHDSYDDEKHRHTRRRHKRNTSD---DEHQPRK-RNRHES--SSDD----------EHRISQRRYKHSDSSDDE----------HQHYRRRHKHDNSSEDEHLHRSR---SGKHRK----------------------------PEPEKEADLEEGEIYTKV-DQSKASEGDHANREAFVDFSKSHQIGRAPSHPSQATEVSDDLRAKIRAMLMATL 910    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QDB5 ((Splicing factor, suppressor of white-apricot like {ECO:0000313|EMBL:PSS06120.1}))

HSP 1 Score: 508.834 bits (1309), Expect = 1.317e-165
Identity = 387/815 (47.48%), Postives = 518/815 (63.56%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEE--KPQNDKISGTERG----VGGGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSI--SIDALSNHPVNSQDEVPAKPKDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPTS-----MVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPKGSGSSLE-SAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNNSEHVSSLGSSRASHPQSVAQKSDENGARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEPCNLSGVDAEG----DRAAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEKYHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHR-RHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEK+HQIIARTA +VSKHG QSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVD+ +LL S+   K + +K  G+E      VG GAL LLGS YG G+D+DAAVEN+  S+E +       H S KT +  ++    +A+  HP        + PK+KV +LKRNSFTS  K+G  ++ RKE D +   SA   + Q S     S     ++EPPS++K+++ KIVEFIM+NGKQFEAVLIEQDS+HG+FPFLL SNQY+ YY+K+L++AQ+S ++G++ + EKDGS ++G  KKT + K + SS   S  C+IP+D DRK+KFKMVIGK K DG DPP KA Q Q   GV+ AAAAAILQAAT+G + PN   LS +SLN  D+ SE          S P  VA+   +    A EAA EA+S EA+LT+EQKLKAERLRRAKMFVAM+K+G+AP  KTE     S EP   +GV + G    D A +ERE  S PL++  ++ IE +  K+S DE +ER+ RRKYRS S +               E+E   +    +  +EE+D  E+ H+HSR+ HRS R+S    E+ + E ++E++H+Y+RK H SY SS +ED EE  +                       +RDHK+S+K HRS +  D+ DED  +D   +   +     R       RHKH+ RH SSK++ES R  R    S +++ L   S+  + ++     E+LEEGEI +K+SD+SRGS G G  RE S+D+SSS Q+ ++ SQP   TEVS++LRAKIRAML+ T+
Sbjct:  142 PPTEKIHQIIARTATFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDNQDLLQSDVDGKSEAEKKGGSEGNQTDVVGAGALFLLGSFYGSGEDEDAAVENSSESKETS-----VCHTSGKTETPGNLDGKDEAIGKHP--------SPPKEKVLILKRNSFTSAPKSGKLNNTRKEGDRIDLLSAAVDKPQPSAPPNISHVEQLLLEPPSDIKRLVDKIVEFIMRNGKQFEAVLIEQDSKHGKFPFLLPSNQYHPYYVKVLQKAQESNLNGKSFISEKDGSVVNGLDKKTHLSKETDSSASGSTCCDIPYDGDRKEKFKMVIGKLKKDGQDPPYKANQPQ--FGVNVAAAAAILQAATRGTKNPNFGILSSTSLN--DDKSEQ-----KRDRSGPIPVAKAITKTA--ALEAANEADSSEAHLTKEQKLKAERLRRAKMFVAMLKNGAAPS-KTEPLRSLSVEPQG-TGVSSSGDGVVDLAGKERESISVPLDVNTSDKIEKSEKKYS-DENHERRLRRKYRSRSGR--------------CEEEGEEEEEEEEEEEEEEDEEEEDHKHSRKKHRSHRSSR---EEGKEEDEEEREHRYARKKHWSYHSSREEDGEEDGED----------------------ERDHKHSRKKHRSHE--DNKDEDYEDDGHHKHSKKKHRSHRSSRHSRDRHKHKERHFSSKNKES-RHRRKQERSSDDDHLRRSSNSRHRKISH-SEEELEEGEICSKISDRSRGSVGAGISREASLDLSSSCQEGRAPSQPSVATEVSDELRAKIRAMLMATL 886    
BLAST of XM_017402160.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4EYQ5 ((splicing factor, suppressor of white-apricot homolog {ECO:0000313|RefSeq:XP_018824521.1}))

HSP 1 Score: 508.064 bits (1307), Expect = 1.709e-165
Identity = 367/837 (43.85%), Postives = 489/837 (58.42%), Query Frame = 0
 
Query:    3 PPTEKLHQIIARTAIYVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRYLVDHSELLHSEEKPQNDKISGTERGVG-------GGALSLLGSLYGFGDDDDAAVENALTSEENASSGAITAHMSEKTASVKSISIDALSNHPVNS--QDEVPAKP-----KDKVFVLKRNSFTSGSKAGSGSDRRKEADSVVSHSATTSRSQSSFVTPT----SMVEPPSEMKKMIAKIVEFIMKNGKQFEAVLIEQDSEHGRFPFLLSSNQYYQYYLKILEEAQKSRVSGRASVKEKDGSGLHGSSKKTIVPK-GSGSSLESAECEIPFDFDRKDKFKMVIGKSKNDGLDPPSKAGQQQSEVGVDAAAAAAILQAATKGIRTPNLDFLSRSSLNRKDNN----SEHVSSLGSSRASHPQSVAQKSDENG--------------ARAREAAGEAESREANLTREQKLKAERLRRAKMFVAMIKSGSAPQIKTESSHGTSSEP--CNLSGVDAEGDR-AAREREGSSAPLEIGATENIESAANKFSTDEYNERKARRKYRSNSSKHDAAKDYTDDEEDEVEDEVVYKHSRNKHRKEEKDHSEK-YHRHSRRHHRSRRASHDGDEKDEVEHDDEKDHKYSRKHHRSYKSSNDEDEEEHEDRRYRKKHRSLRCSNDGDEVEGDDKRDHKYSKKHHRSSKSTDDDDEDEYEDRRSRKKHRSRHHSRHHSRDSHRHKHRRHTSSKDRESQRQNRHNITSGEENVLCIGSDEFNGEVPQPEREDLEEGEISAKVSDQSRGSAG-GAHREPSVDVSSSFQDQKSSSQPLEPTEVSNDLRAKIRAMLLETM 797
            PPTEKLHQIIARTA++VSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLH+YFR+LVDH EL     +P +   S  E+ +        GGALS+LGS+YG G+D+D   E+   SEE    G   A++S      +           VN+  +DEV AK      K+K  ++KRN F   S  G+ S  + E D++ + S    +SQ+S    +     +VEPPS++K+++ KIVEFI++NGK+FEAVL+EQD +HGRFPFLL SNQY+ YYL++L++A++S++ G+ SV EK  S  HG  KKT   K G   S  SA  +IP+++D+K+KFKMVIGKSK DG DPPSKA + Q    +DAA+ AAILQAAT+GI+   L+F  R+SLN             SS GS ++S PQ    K  + G                A  AA EA+S EA LT+EQKLKAERL+RAKMF AMIK+G+AP +KTE   G S+EP    +SG DA+ +    +EREGSS P+++  ++  E +  K S DEYNER+++R YRS S +H+  ++   +E +E      +KHSR KHR     H  +  H+H +RH     +S D D +    +DD  D ++ R  H+   ++  EDE     RR  K HR    S+D      ++ R  +  +KHH SS     DDE E         HRSR                   S + R+SQ                            PE  DLEEGEI  K SDQS+ S G GA+RE S++VS S++D ++ SQPLE TEVS+DLRAKIRAML+ T+
Sbjct:  140 PPTEKLHQIIARTAVFVSKHGAQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQELF----EPDSGSKSLEEKNIADSGPDHSGGALSILGSVYGSGEDEDGTTEDVPESEEAVDVG--NANVSNGLEQAEPY---------VNAAGKDEVVAKSSFSIMKEKAPIIKRNRFI--STVGTTSGNKNEGDALNALSIAGDKSQTSLPRTSKVEGPIVEPPSDLKRVVDKIVEFILRNGKEFEAVLVEQDKKHGRFPFLLPSNQYHAYYLEVLKKAKESKLPGKDSVSEKHDSVGHGVDKKTASSKEGDTLSGGSASHDIPYNYDKKEKFKMVIGKSKKDGQDPPSKATEPQ----IDAASTAAILQAATRGIKNAGLEFFPRTSLNSSGRGLSIEGGRTSSFGSLQSSQPQKSISKPGQMGDPNVSAPVAKAIAETAAIAAASEADSSEACLTKEQKLKAERLKRAKMFAAMIKTGAAP-MKTEPLRGLSAEPPASGISGSDADFENLVGKEREGSSVPMDVDTSDKTEKSDKKSSVDEYNERRSKRSYRSRSKRHEQEEEEEKEEREEEYKR-AHKHSRKKHRSLRSSHHNRDRHKHRKRH----SSSEDTDSRHVHNYDDSLDDEHRRSSHQHKHNARSEDE-----RRPSKHHRKHASSSD------NEHRHSQRRRKHHSSSS----DDEHE---------HRSR-------------------SVRYRKSQ----------------------------PEEVDLEEGEILTK-SDQSQASQGKGANREASIEVSKSYRDGRAPSQPLETTEVSDDLRAKIRAMLMATL 877    
Match NameStatsDescription
A0A5B6ZBQ8E-Value: 0.000e+0, PID: 48.93(Uncharacterized protein {ECO:0000313|EMBL:MPA4144... [more]
A0A5B6ZBD0E-Value: 2.020e-179, PID: 48.08(Uncharacterized protein {ECO:0000313|EMBL:MPA4145... [more]
A0A5B6ZBX9E-Value: 2.522e-178, PID: 47.90(Uncharacterized protein {ECO:0000313|EMBL:MPA4145... [more]
A0A6J5UQF8E-Value: 1.426e-168, PID: 43.58(Uncharacterized protein {ECO:0000313|EMBL:CAB4277... [more]
A0A7J0G2E2E-Value: 8.153e-168, PID: 47.42(SWAP (Suppressor-of-White-APricot)/surp domain-co... [more]
A0A7J0HG50E-Value: 1.276e-167, PID: 44.62(SWAP (Suppressor-of-White-APricot)/surp domain-co... [more]
A0A2R6P5C7E-Value: 1.336e-167, PID: 44.55(Splicing factor, suppressor of white-apricot like... [more]
A0A5E4F8E2E-Value: 8.472e-166, PID: 44.35(Full=PREDICTED: splicing factor suppressor of {EC... [more]
A0A2R6QDB5E-Value: 1.317e-165, PID: 47.48(Splicing factor, suppressor of white-apricot like... [more]
A0A2I4EYQ5E-Value: 1.709e-165, PID: 43.85(splicing factor, suppressor of white-apricot homo... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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