XM_017402282.1

Resource Type: 
Polypeptide
Name: 
XM_017402282.1
Identifier: 
XM_017402282.1-protein
Sequence: 
MGRSTKSCFKIITCGSDSVDRDDLQVSESKSSARGWSFRKRSASHRVLSN
TVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAI
NSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVT
LQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAEEKRHVKPGR
DSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDP
SRPDSAWEWMERWVSVSPTEQSPKVEPSTALKDQEILKHPENQVETACAD
KEDSELTDFTFVATSAAVPYLESDSEEAAVLSKSEQNLASQEFEQPQPES
QDSTKSSESPQQPLDKPSDSSPEVELNNLPSKPELEEEQPKRSVEIVASE
HTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEV
ESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTL
DSPEQSEFGAVDGHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDL
SNPLMVQSEKQSDTDIVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKS
SPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRS
PLPSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSV
PSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPR
IQRSTSLAQQSTKESGNVPAQEKKWQR
Sequence Length: 
777
Sequence Checksum: 
96afbe76ba7db5e2c9116525d2f12af7
View location in JBrowse: 
DCARv2_Chr6:12422950..12427691+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402282.1, derives from mRNA, XM_017402282.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZEV7 (DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178})

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 424/817 (51.90%), Postives = 550/817 (67.32%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIIT-CGSDSVDRDDLQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLS-----AEEKRHVKPGRD--SSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTE--QSPKVEPSTALKDQEILKHPENQVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAV----------LSKSEQNLASQEFEQPQPESQDSTKSSESPQQPLDK------PSDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVDG-HEVNISEEEMSNLKNT-TICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTD---------IVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVPAQEKKWQR 777
            MGRST SCFK+IT CGSDSV +DDL+ S+ K S+  RGWSFRKRSA HRVLSNTVISE PS+ NKESPE+ + ++Q Q  + +PEK+S MQ T+E PQL  ++NSK  E +V  E DT++D+ P+ESV+TVIQ A+R FLAQR L K KNIV LQAAVRGHLVRR AVG+LRCVQAI+K+Q LVRAR  RLS      E K   K G+D  SSK+ E+  S  +   +YTSIEKLLSN FAR+LLES+P TK ++IKCDPSR DSAW+W+ERW+SVS T   QS K    T  ++QE ++H   QVE     +   E TD         VP+   +SEE  +          + +   +  S    QPQPE+   T +S S    LD        SD   + ELN+L S PE+E EQP  S++  A E   TEG K VFG RKASN A IA QSKFEEL  T+N   + +S N+D  VES      S++D++++T +  L+++++    +VL+G SECGTELSI+STLDSP++SE GA++   E  + EE  SN+K+T  + +E +     P     +D+S    VQ EK  D +         ++  +SS+++    + AS +Q +++ +T +Q YKSSPEASPRS +T+ +SQ TPSSQVS K+++T+S K+GS+ KR+SLS GKRSP  P++DSG RSSLE+LPKD K+GK RNS  SA+ DHVD+  RDSSSS S+PSYMQATESARAKAYA+ +PRSSPDVQDK+ +IKKRHSLP ANG+Q SPRI+RS S AQQ  K +G     E+KWQR
Sbjct:    1 MGRSTTSCFKVITTCGSDSVAKDDLEASQGKGSSDKRGWSFRKRSARHRVLSNTVISEKPSA-NKESPESATVNFQTQANSTVPEKTSAMQCTDEKPQLSTSVNSKVAETIVSLEDDTEVDVNPEESVITVIQAAVRGFLAQRALLKLKNIVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQALVRARRARLSIGGSCTEMKLDGKHGKDNHSSKLLEKENSVTRSNVKYTSIEKLLSNGFARQLLESTPRTKPIHIKCDPSRSDSAWKWLERWMSVSSTGVGQSQK---GTEQQEQEKVEHSTCQVEAGIPSESYYETTDLKTSIGETTVPF---ESEEDLITYDAGNFEFQVCRPTSSSTSDNLVQPQPEN---TGTSNSKANSLDSLPNQITQSDLISQTELNSLSSNPEVESEQPIHSIKRFAPEQPETEGNKFVFGLRKASNPASIAGQSKFEELMLTANSTRTFSSSNQDVGVESNMDAVFSAMDNAIRTGEIGLSENSVLHTSRVLVG-SECGTELSISSTLDSPDRSEVGAMEFEQEAKVLEEGTSNIKSTKNLDVEAKGEFTTP----GSDVSYSTTVQPEKLDDGNGADGEPVNSVIAIDSSQVKQELEKNASDVQIELDSETGHQAYKSSPEASPRSHMTVPESQGTPSSQVSVKAKRTKSHKSGSNPKRRSLSAGKRSPANPNHDSGARSSLEQLPKDHKSGKQRNSLSSARPDHVDQEPRDSSSSNSLPSYMQATESARAKAYASSSPRSSPDVQDKDIFIKKRHSLPGANGKQESPRIERSMSQAQQGAKGNG-THHHERKWQR 801
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZFK3 ((Uncharacterized protein {ECO:0000313|EMBL:MPA42899.1}))

HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0
Identity = 420/809 (51.92%), Postives = 545/809 (67.37%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIIT-CGSDSVDRDDLQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLS-----AEEKRHVKPGRD--SSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTE--QSPKVEPSTALKDQEILKHPENQVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAV----------LSKSEQNLASQEFEQPQPESQDSTKSSESPQQPLDK------PSDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVDG-HEVNISEEEMSNLKNT-TICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTD---------IVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVP 769
            MGRST SCFK+IT CGSDSV +DDL+ S+ K S+  RGWSFRKRSA HRVLSNTVISE PS+ NKESPE+ + ++Q Q  + +PEK+S MQ T+E PQL  ++NSK  E +V  E DT++D+ P+ESV+TVIQ A+R FLAQR L K KNIV LQAAVRGHLVRR AVG+LRCVQAI+K+Q LVRAR  RLS      E K   K G+D  SSK+ E+  S  +   +YTSIEKLLSN FAR+LLES+P TK ++IKCDPSR DSAW+W+ERW+SVS T   QS K    T  ++QE ++H   QVE     +   E TD         VP+   +SEE  +          + +   +  S    QPQPE+   T +S S    LD        SD   + ELN+L S PE+E EQP  S++  A E   TEG K VFG RKASN A IA QSKFEEL  T+N   + +S N+D  VES      S++D++++T +  L+++++    +VL+G SECGTELSI+STLDSP++SE GA++   E  + EE  SN+K+T  + +E +     P     +D+S    VQ EK  D +         ++  +SS+++    + AS +Q +++ +T +Q YKSSPEASPRS +T+ +SQ TPSSQVS K+++T+S K+GS+ KR+SLS GKRSP  P++DSG RSSLE+LPKD K+GK RNS  SA+ DHVD+  RDSSSS S+PSYMQATESARAKAYA+ +PRSSPDVQDK+ +IKKRHSLP ANG+Q SPRI+RS S AQQ  K +G  P
Sbjct:    1 MGRSTTSCFKVITTCGSDSVAKDDLEASQGKGSSDKRGWSFRKRSARHRVLSNTVISEKPSA-NKESPESATVNFQTQANSTVPEKTSAMQCTDEKPQLSTSVNSKVAETIVSLEDDTEVDVNPEESVITVIQAAVRGFLAQRALLKLKNIVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQALVRARRARLSIGGSCTEMKLDGKHGKDNHSSKLLEKENSVTRSNVKYTSIEKLLSNGFARQLLESTPRTKPIHIKCDPSRSDSAWKWLERWMSVSSTGVGQSQK---GTEQQEQEKVEHSTCQVEAGIPSESYYETTDLKTSIGETTVPF---ESEEDLITYDAGNFEFQVCRPTSSSTSDNLVQPQPEN---TGTSNSKANSLDSLPNQITQSDLISQTELNSLSSNPEVESEQPIHSIKRFAPEQPETEGNKFVFGLRKASNPASIAGQSKFEELMLTANSTRTFSSSNQDVGVESNMDAVFSAMDNAIRTGEIGLSENSVLHTSRVLVG-SECGTELSISSTLDSPDRSEVGAMEFEQEAKVLEEGTSNIKSTKNLDVEAKGEFTTP----GSDVSYSTTVQPEKLDDGNGADGEPVNSVIAIDSSQVKQELEKNASDVQIELDSETGHQAYKSSPEASPRSHMTVPESQGTPSSQVSVKAKRTKSHKSGSNPKRRSLSAGKRSPANPNHDSGARSSLEQLPKDHKSGKQRNSLSSARPDHVDQEPRDSSSSNSLPSYMQATESARAKAYASSSPRSSPDVQDKDIFIKKRHSLPGANGKQESPRIERSMSQAQQGAKGNGTHP 794
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H068 (DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178})

HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 419/810 (51.73%), Postives = 546/810 (67.41%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIITCGSDSVDRDDLQVSESK--SSARGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAEEKRHVKPGRDSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTEQSPKVEPSTALKDQEILKHP--EN---QVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAVLSKSEQNLA-----SQEFEQPQPESQDSTKSSESP--------QQPLDKPSD--------SSPE----VELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVD-GHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTD------IVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTK-ESGNVP 769
            MGRS  SCFKII+CG DSV +D+L ++E K  S  RGWSFRKRSA HRVLSNTV+SE+PSS NKESPE+ + ++Q    + +PEK+S  QW +E PQL  + NSK  E VV +E ++K+D+  DES    IQ A+R FLAQR L K KN++ LQAAVRGHLVRR AVG+LR VQAI+K+Q LVRAR  +    + R  KP   SSK  E+  S A P A YTSI+KLLSN FAR+LLES+P TKS++IKCDPSRP+S W+W+ERW+SVS +      +P   + ++E L+H   EN   QVET    +  SE  D            L+S+  E AV S+SE+NL      S +F+   P S     + E P            D PS+          PE     E N++  K E+E EQPKRSV+  ASE   TEG+K VFGSRK SN AF+AAQSKFEEL+ST+N    ++  ++D  VES   T SS+ D S+ TKD N  D++IP   ++ +GGSECGTELSITSTLDSP+ SE GA++  +E  +SEE + NL N+T  ++ E++  D S I  ++LS+ ++   EK+   +      +V+ +SS+++ +    AS +Q +++  T  Q Y+SSPEASPRS +T+ +SQ TPSSQVS K+++++++K+GS+QKR SLS GKRSP  P++DSG RSS+E+LPKD+K GK RNSFGS + D+VD+  RDSSSS S+PSYMQATESARAK +AN +PRSSPDVQDK+ YIKKRHSLP ANGRQGSPRIQRS S AQQ  K  S N P
Sbjct:    1 MGRSA-SCFKIISCGGDSVGQDELDLAERKGYSDKRGWSFRKRSARHRVLSNTVVSEIPSSGNKESPESAAINFQTPVDSTIPEKTSVPQWADEKPQLSTSFNSKASETVVASENESKVDVNVDESAAIAIQAAVRGFLAQRALLKLKNVIKLQAAVRGHLVRRHAVGTLRVVQAIVKIQALVRARRVQAGKLDDRKDKP---SSKPMEKENSSADPSATYTSIDKLLSNGFARQLLESNPRTKSIHIKCDPSRPNSGWQWLERWMSVSSSNLG---QPQIPVLEKEELEHERVENSAVQVETGITSETTSESED------------LKSNVRETAVPSESEENLITYDAESFDFQTCCPTSSSVKDNLELPPSENTGGTSHAKDSPSEIDLLPNHTMQPEEKSLTEFNSVSGKSEMESEQPKRSVKRFASEQLETEGKKFVFGSRKVSNPAFVAAQSKFEELSSTANSGRLISPSHQDVGVESNIETVSSAADTSITTKDLNSEDNSIPPNSRLQVGGSECGTELSITSTLDSPDISEVGAMEFDNEAKVSEEVICNL-NSTGGLDVESK--DVSTIAVSNLSDTMLAPPEKRDAVNGEPVNSVVDVDSSQVKQKPERTASDLQIELDPQTGRQAYRSSPEASPRSHITVPESQGTPSSQVSVKAKRSKTDKSGSNQKRASLSAGKRSPSNPNHDSGARSSMEQLPKDQKTGKRRNSFGSTRPDNVDQEPRDSSSSNSLPSYMQATESARAKLHANNSPRSSPDVQDKDIYIKKRHSLPGANGRQGSPRIQRSMSQAQQGAKGNSANPP 788
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HS85 (DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178})

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 395/793 (49.81%), Postives = 524/793 (66.08%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIITCGSDSVDRDD-LQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAEEK---RHVKPGRDSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTEQSPKVEPSTALKDQEILKHPENQVETACADKE------DSELTDFTFVATSAAVP------YLESDSEEAAVLS-KSEQNLASQEFEQPQPESQDSTKSSES----PQQPLDKPSDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVDGHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTDIVNEES--SKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPLPSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNV 768
            MGRST SCFKIITC SD+VD DD ++ SESK S+  RGWSFRKRSA HRVLSN VISE+PSS+NK+ PE  + + + QP     EK+S M WT+E P+L  + N K  +  V  E DT  D+ PDESV+ +IQ AIR FLAQREL K KN+V LQAAVRGHLVRRQAVG+L C+QAI+KMQ LVRAR  R+S++ K    HVK   + SK+ E+    AKP   YTSIEKLL N FA +LLES+P TK ++IKCDPSR DS+W+W+ERW+SVS        +P   ++     +H E++ E +  + E      DSE TD         VP       +  D++  AVL+ +   +  S   E PQPE+  ++   ES    P Q   K SDS  ++EL +  SKPE+E E    SV+ +ASE    EG+K VFG RKA+N AFIA +SKFEEL+ST+N   S ++ ++D  VES     S ++D++V+T +  LA++++    +V +GGSECGTELSITSTLDSPE SE GA    +  I  E+ ++  + T  ++ EA  +  + I  +D +  ++VQ EK  D +  N +   S     S++   ++Q K+  +T ++MYKSSPEASPRS +T+ + Q TPSSQVS K+ +T+SE+  ++QKR+S          ++DS  RSSLE+LPK+ K GK RNSFGS + D+VD+  RDS+SS S+PSYMQATESARAKA A  +PRSSPDVQDK+ YIKKRHSLP++NGRQGSPRIQRSTS AQQ  K +G++
Sbjct:    1 MGRSTASCFKIITCSSDAVDEDDDIEASESKGSSDKRGWSFRKRSARHRVLSNIVISEMPSSLNKDGPETATVNLETQPNPAFQEKTSAMGWTDEKPRLSTSANLKVSDTRVATENDTMHDVDPDESVIVIIQAAIRGFLAQRELLKLKNVVKLQAAVRGHLVRRQAVGTLHCLQAIVKMQTLVRARQARVSSDGKLDGNHVKDDHN-SKLLEKGDLLAKPNVRYTSIEKLLKNKFAHQLLESTPRTKHIHIKCDPSRSDSSWKWLERWMSVSSMGVEQPQKPGLRME-----QHEEDKDECSGCEVESEFPSGDSESTDLKATIREKVVPSKGEDTLMTYDADNVAVLACEPASSTISDNLELPQPENSGTSNLKESLDLLPNQT--KQSDSISQMELKSNTSKPEMENEHSACSVKSLASEQVEAEGKKFVFGMRKATNPAFIAVKSKFEELSSTANFARSTSTYSQDVGVESNSDAVSYAMDNAVRTMEIGLAENSVLHTSRVKVGGSECGTELSITSTLDSPESSEIGATGVEQEAILFEKGNSNADITRTLDIEA--NGVTTIPGSDSAYSILVQPEKLDDVNGANGKPVISVTAVDSLQEQPNVQIKLGSETGHKMYKSSPEASPRSHMTVPEFQVTPSSQVSVKTERTKSERGSTNQKRRS----------NHDSVTRSSLEQLPKENKTGKRRNSFGSGRPDYVDQEPRDSNSSNSLPSYMQATESARAKALATSSPRSSPDVQDKDIYIKKRHSLPASNGRQGSPRIQRSTSQAQQGAKGNGHL 773
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ADQ6 (DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178})

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 415/825 (50.30%), Postives = 541/825 (65.58%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIITCGSDSVDRDDLQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEK---------SSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLS-----AEEKRHVKPGRD--SSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPT--EQSPKVEPSTALKDQEILKHPENQVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAV----------LSKSEQNLASQEFEQPQPESQDSTKSSESPQQPLD-------KPSDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVDG-HEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTD---------IVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVPAQEKKWQR 777
            MGRST SCF II+CGSDSV ++D   SESK S+  RGWSFRKRSA HRVLSNTVISE PS+ NK SPE+ + +   Q  + +PEK         +S MQ T+E  +   ++NSK  E  V +E DT++D+  DESV+TVIQ AIR FLAQR L K KNIV LQAAVRGHLVR  AVG+LRCVQAI+K+Q LVRAR  RLS      E +   K G+D  SSK+ E+  S  K    YTSIEKLLSN F R+LLES+P TK+++IKCDPSR DSAW+W ERW+SVS T  EQS K       +++E ++H  +QVE     +   E TD        AVP+   +SEE  +          + +   +  S +  QPQPE+   T +S S +  LD       +P   SP +E+N++ SKPE E EQ K S    A E   TEG K VF SRKASN A IAAQSKFEEL+ST+N V S++S +++  VES     SS++D++ + +D +L+++++P   +VL+GGSECGTELSI+STLDSP++ E GAVD   E  +SEE  SN+ +T   ++ EA+ +  S I  +D +    VQ E   D +         ++  +SS+++    + AS +Q +++  T +Q +KSSPEASPRS +T+ +SQ TPSSQVS K+++T+S K+GS+ K +SLS  KRSP  P++DSG   SLE+LPKD K GK RNS  SA+ DHVD+  RDS SS S+PSYMQAT+SARAKA A+ +PRSSPDVQDK+ YIKKRHSL  ANG Q SPRIQR+TS  QQ  K +G     E+KWQR
Sbjct:    1 MGRSTPSCFSIISCGSDSVFKEDFDDSESKGSSDKRGWSFRKRSARHRVLSNTVISEAPSA-NKGSPESATVNSLTQANSPIPEKNLQCTDEKPTSAMQCTDENSRFSTSVNSKVSETRVSSEDDTEVDVNLDESVITVIQAAIRGFLAQRALLKLKNIVKLQAAVRGHLVRSHAVGTLRCVQAIVKLQALVRARLARLSIGGSCTEMRLDGKHGKDNHSSKLLEKENSVTKSNVTYTSIEKLLSNGFTRQLLESTPRTKTIHIKCDPSRSDSAWKWFERWMSVSSTGVEQSQK---GIEQQEEEKVEHSTSQVEAGIPFESYYETTDLKTSIGETAVPF---ESEENLITYDVDNFEFQVCRPTSSSKSDDLVQPQPEN---TGTSNSKRNSLDSLPNQITQPRLISP-MEVNSISSKPEAESEQHKCSTRRFAPEQAETEGNKFVFESRKASNPASIAAQSKFEELSSTANSVRSISSFHQEIGVESNMDAVSSAMDNAFRIRDIDLSENSVPHTSRVLVGGSECGTELSISSTLDSPDRFELGAVDFEQEAKVSEEGTSNIMSTK-NLDAEAKGE--STIPGSDATYSTTVQPETLGDVNGADGEPLDSVIAVDSSQVKQELEKNASDVQTELDSQTGHQAFKSSPEASPRSHMTVPESQGTPSSQVSVKAKRTKSHKSGSNPKHRSLSASKRSPANPNHDSGASGSLEQLPKDHKYGKRRNSLSSARPDHVDQEPRDSCSSNSLPSYMQATKSARAKAQASSSPRSSPDVQDKDIYIKKRHSLTGANGNQESPRIQRTTSQGQQGAKGNG-THHHERKWQR 810
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EA98 (DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178})

HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0
Identity = 397/793 (50.06%), Postives = 520/793 (65.57%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIITCGSDSVDRDD-LQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAEEK---RHVKPGRDSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTEQSPKVEPSTALKDQEILKHPENQVETACADKE------DSELTDFTFVATSAAVP------YLESDSEEAAVLS-KSEQNLASQEFEQPQPESQDSTKSSES----PQQPLDKPSDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVDGHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTDIVNEES--SKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPLPSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNV 768
            MGRST SCFKIITC SD+VD DD ++ SESK S+  RGWSFRKRSA HRVLSN VISE+PSS+NK+ PE    + + QP     EK+S M WT+E P+L  + N K  +  V  E DT  D+ PDESV+ +IQ AIR FLAQREL K KN+V LQAAVRGHLVRRQAVG+L C+QAI+KMQ LVRAR  R+S++ K    HVK   + SK+ E+    AKP   YTSIEKLL N FA +LLES+P TK ++IKCDPSR DS+W+W+ERW+SVS        +P   ++     +H E++ E +  + E      DSE TD         VP       +  D++  AV + +   +  S   E PQPE+  ++   ES    P Q   K SDS  ++EL +  SKPE+E E    SV+ +ASE   TEG+K VFG RKA+N AFIA +SKFEEL+ST+N   S ++ ++D  VES     S ++D++V+T +  LA++++    +V +GGSECGTELSITSTLDSPE SE GA  G E      E  N   +T+ IE     +  + I  +D +  ++VQ EK  D +  N +   S     S++   ++Q K+  +T ++MYKSSPEASPRS +T+ + Q TPSSQVS K+ +T+SE+  ++QKR+S          ++DS  RSSLE+LPK+ K GK RNSFGS + D+VD+  RDS+SS S+PSYMQATESARAKA A  +PRSSPDVQDK+ YIKKRHSLP++NGRQGSPRIQRSTS AQQ  K +G++
Sbjct:    1 MGRSTASCFKIITCSSDAVDEDDDIEASESKGSSDKRGWSFRKRSARHRVLSNIVISEMPSSLNKDGPETAIVNLETQPNTAFQEKTSAMGWTDEKPRLSTSANLKVSDTRVATENDTMHDVDPDESVIVIIQAAIRGFLAQRELLKLKNVVKLQAAVRGHLVRRQAVGTLHCLQAIVKMQTLVRARQARVSSDGKLDGNHVKDDHN-SKLLEKGDLLAKPNVRYTSIEKLLKNKFAHQLLESTPRTKHIHIKCDPSRSDSSWKWLERWMSVSSMGVEQPQKPGLRMQ-----QHEEDKDECSGCEVETEFPSGDSESTDLKATIREKVVPSKGEDTLMTYDADNVAVQACEPASSTISDNLELPQPENSGTSNLKESLDLLPNQT--KQSDSISQMELKSNTSKPEMENEHSACSVKSLASEQVETEGKKFVFGMRKATNPAFIAVKSKFEELSSTANFARSTSTYSQDVGVESNSDAVSYAMDNAVRTMEIGLAENSVLHTSRVKVGGSECGTELSITSTLDSPESSEIGAT-GVEQEAILFEKGNSNVSTLDIE----ANGVTTIPGSDSAYSILVQPEKLDDVNGANGKPVISVTAVDSLQEQPNVQIKLGSETGHKMYKSSPEASPRSHMTVPEFQVTPSSQVSVKTERTKSERGSTNQKRRS----------NHDSVTRSSLEQLPKENKTGKRRNSFGSGRPDYVDQEPRDSNSSNSLPSYMQATESARAKALATSSPRSSPDVQDKDIYIKKRHSLPASNGRQGSPRIQRSTSQAQQGAKGNGHL 770
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4DKW0 ((protein IQ-DOMAIN 32 isoform X1 {ECO:0000313|RefSeq:XP_018807773.2}))

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 408/810 (50.37%), Postives = 532/810 (65.68%), Query Frame = 0
 
Query:    7 SCFKIITCGSDSVDRDDLQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAE--------EKRHVKPGRDSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSV-SP-TEQSPKVEPSTALKDQEILKHPENQVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAVLSKSEQNLASQ-----EFEQPQPES--------QDSTKSSESPQQPLDKP-----SDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVD-GHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTDI------VNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSS-SPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVPAQEKKWQR 777
            SCFKIITCGSDS D+DDL+VSESK S   RGWSFRKRSA HRVLSNTVISE PSS NKESPE+ + ++     + +PEK S +Q T E PQL  ++N K +E +V AE ++  D+  +ESVV VIQTAIR F+  R L K KN+V LQAAVRGHLVR  AVG+LRCVQAI+KMQ L+RAR  RLS E        + +H + G +SS  +       K    YTSI+KLLSNSFAR+LLES+P TK +++KCD S+PDS W W+ERW+SV SP T +S K E  T  + +E  ++  + VET    +E  E  D            + S ++E    S+SE NL +      EF+   P S        Q  + ++E+P      P     +DS+ +VE N+L  KPE E E+PKRS++ +A E   TE +K VFGSRK SN AFIAAQSKFEEL+ST N    ++   ED  VES   T  S  D  ++TK+   A+ + P + K  +GGSECGTELSITSTLDSP++SE GA + GHE  + EE + N  N+T  +  E++  D S+I  +DLS  +  Q EK  D +       V   SS+L+ +    AS M+++++ + V+Q Y+SSPEASPRS +T+ +S  TPSSQVS +++K +++K+GS+ KRKSLS GK SP  P+ DS  RSS+E+LPKD+K GK RNSFGS + DH+++  RDSS+ + S+P +MQATESARAK  AN +P SSPDVQD++ YIKKRHSLP ANGRQGSPRIQRS S AQQS K +G     E+KWQR
Sbjct:    6 SCFKIITCGSDSADKDDLEVSESKGSGDKRGWSFRKRSARHRVLSNTVISETPSSGNKESPESATLNHPLPANSTVPEKVSAIQSTGEKPQLSTSVNPKVIETIVAAENESTPDVNLEESVVIVIQTAIRGFMGLRMLLKLKNVVKLQAAVRGHLVRNHAVGTLRCVQAIVKMQALIRARRARLSLEVSCPEKKLDDKH-EEGNNSSNTQVNESVVTKSAITYTSIDKLLSNSFARQLLESTPKTKPIHVKCDSSKPDSGWNWLERWMSVTSPNTVESKKAELVTDQQKKEKDENVVSLVETKVPSEEFMESQD------------VNSSNKETLERSESEDNLITYDPSNFEFQACHPTSSLQNDVLEQRRSDANETPLMITSTPNQSTQADSTSQVEFNSLSVKPEAETEEPKRSMKRLAPEQLETEAKKFVFGSRKVSNPAFIAAQSKFEELSSTLNSDRPMSPSYEDAGVESHTDTILSGTDTVIRTKELITAETSAPHSSKAQVGGSECGTELSITSTLDSPDRSEVGATECGHEAKVLEEGICN-PNSTENVNVESK--DASVISPSDLSPFVSDQPEKPGDANGESINLEVAANSSQLKPQLENNASDMKRQLDSEIVHQSYRSSPEASPRSHITVPESHGTPSSQVSVRAKKNKTDKSGSNHKRKSLSGGKNSPSNPNLDSASRSSMEQLPKDQKNGKRRNSFGSPRPDHIEQEPRDSSTNNNSLPHFMQATESARAKLQANKSPISSPDVQDRDIYIKKRHSLPGANGRQGSPRIQRSMSQAQQSAKGNGTY-LHERKWQR 798
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4DKV0 ((protein IQ-DOMAIN 32 isoform X2 {ECO:0000313|RefSeq:XP_018807775.2}))

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 409/810 (50.49%), Postives = 532/810 (65.68%), Query Frame = 0
 
Query:    7 SCFKIITCGSDSVDRDDLQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAE--------EKRHVKPGRDSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSV-SP-TEQSPKVEPSTALKDQEILKHPENQVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAVLSKSEQNLASQ-----EFEQPQPES--------QDSTKSSESPQQPLDKP-----SDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVD-GHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTDI------VNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSS-SPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVPAQEKKWQR 777
            SCFKIITCGSDS D+DDL+VSESK S   RGWSFRKRSA HRVLSNTVISE PSS NKESPE+ + ++     + +PEK S +Q T E PQL  ++N K +E +V AE ++  D+  +ESVV VIQTAIR F+  R L K KN+V LQAAVRGHLVR  AVG+LRCVQAI+KMQ L+RAR  RLS E        + +H + G +SS  +       K    YTSI+KLLSNSFAR+LLES+P TK +++KCD S+PDS W W+ERW+SV SP T +S K E  T  + +E  ++  + VET    +E  E  D            + S ++E    S+SE NL +      EF+   P S        Q  + ++E+P      P     +DS+ +VE N+L  KPE E E+PKRS++ +A E   TE +K VFGSRK SN AFIAAQSKFEEL+ST N    ++   ED  VES   T  S  D  ++TK+   A+ + P + K  +GGSECGTELSITSTLDSP++SE GA + GHE  + EE + N  N+T  +  E++  D S+I  +DLS  +  Q EK  D +       V   SS+L+ +    AS M+++++ + V+Q Y+SSPEASPRS +T+ +S  TPSSQVS +++K +++K+GS+ KRKSLS GK SP  P+ DS  RSS+E+LPKD+K GK RNSFGS + DH+++  RDSS+ + S+P +MQATESARAK  AN +P SSPDVQD++ YIKKRHSLP ANGRQGSPRIQRS S AQQS K  GN    E+KWQR
Sbjct:    6 SCFKIITCGSDSADKDDLEVSESKGSGDKRGWSFRKRSARHRVLSNTVISETPSSGNKESPESATLNHPLPANSTVPEKVSAIQSTGEKPQLSTSVNPKVIETIVAAENESTPDVNLEESVVIVIQTAIRGFMGLRMLLKLKNVVKLQAAVRGHLVRNHAVGTLRCVQAIVKMQALIRARRARLSLEVSCPEKKLDDKH-EEGNNSSNTQVNESVVTKSAITYTSIDKLLSNSFARQLLESTPKTKPIHVKCDSSKPDSGWNWLERWMSVTSPNTVESKKAELVTDQQKKEKDENVVSLVETKVPSEEFMESQD------------VNSSNKETLERSESEDNLITYDPSNFEFQACHPTSSLQNDVLEQRRSDANETPLMITSTPNQSTQADSTSQVEFNSLSVKPEAETEEPKRSMKRLAPEQLETEAKKFVFGSRKVSNPAFIAAQSKFEELSSTLNSDRPMSPSYEDAGVESHTDTILSGTDTVIRTKELITAETSAPHSSKAQVGGSECGTELSITSTLDSPDRSEVGATECGHEAKVLEEGICN-PNSTENVNVESK--DASVISPSDLSPFVSDQPEKPGDANGESINLEVAANSSQLKPQLENNASDMKRQLDSEIVHQSYRSSPEASPRSHITVPESHGTPSSQVSVRAKKNKTDKSGSNHKRKSLSGGKNSPSNPNLDSASRSSMEQLPKDQKNGKRRNSFGSPRPDHIEQEPRDSSTNNNSLPHFMQATESARAKLQANKSPISSPDVQDRDIYIKKRHSLPGANGRQGSPRIQRSMSQAQQSAK--GN----ERKWQR 793
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P4AGG9 ((protein IQ-DOMAIN 32 isoform X1 {ECO:0000313|RefSeq:XP_015884830.1}))

HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0
Identity = 416/819 (50.79%), Postives = 529/819 (64.59%), Query Frame = 0
 
Query:    1 MGRSTKSCFKIITCGSDSVDRDDLQVSESKSSA--RGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAEEKRHVK-----PGRDSSKVKEERKS-GAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTEQSPKVEPSTALKDQEILKHPENQVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAVLSKSEQNLASQE-------------------FEQPQPESQDSTKSSES-------PQQPLDKPSDSSPEVELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVD-GHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEK------QSDTDIVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPLPSN-DSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVPAQEKKWQR 777
            MG+ST SCFKIITCGSDS D+DD +   SK S   RGWSFRKRSA  RVLSNTV +E P S NKESPE+ + ++Q      +PEK S +Q  +E P LP   N K  E  V  E ++ +D  PDESVV VIQTA+R F+AQR L K  N+V LQAAVRGHLVRR AVG+LRCVQAIIKMQ LVRAR  RLS E    VK     P +D+S  K  +++   K    YTSIEKLLSN FAR+LLES+P TK +++KCD S+PDSAW W+ERW+SVS  + +   +P T  + QE  K  E+  E+       SE+  F   A S      +S  EE+ V S+SE+NL + E                    EQPQ ES+D++ + E+       P Q L   SD+  E+E N    K E+E EQPKRS++  ASE   TEG+K + GSRK SN AFIAA SKFEEL+ST N   S++S  ++  VES D T SS     ++TK+  +A++     P+  +GGSECGTELSI+STLDSP+ S+ GAV+   E  +S+E +SN  N+    + EA+  D S I  + +S P+  Q EK      +S   +V  +S ++E R     S  Q+++  +T  Q+Y SSPEASPRS +T+L+SQ TPSSQVS K RK +S+K+GSSQKR SLS GK+SP  +N DSG RSS+EKL K E+ GK RNS GSA+ D  D   RDS+++ S+P +MQATESARAK  AN +PRSSPDVQ++++YIKKRHSLP ANGRQGSPRIQRS S AQQ TK  GN    E+KWQR
Sbjct:    1 MGKST-SCFKIITCGSDSADKDDAEAYGSKGSTDKRGWSFRKRSARPRVLSNTVNAETPLSGNKESPESANLNFQASADTTIPEKISVVQCIDEKPPLPIPENPKVDETAVATESESVVDTKPDESVVIVIQTAVRGFMAQRALLKLTNVVKLQAAVRGHLVRRHAVGTLRCVQAIIKMQALVRARCARLSLEGSYPVKKLVGKPEKDNSSTKNLKENLAGKTNVTYTSIEKLLSNKFARQLLESTPKTKPIHVKCDLSKPDSAWMWLERWMSVSAADIAETTKPVTVTEQQEGRK--EDNFESQLKSGMQSEV--FGETADS------KSGIEESVVPSESEENLITYEADNFHFHASQSTSSLVKDNLEQPQMESKDASDAKETSIDTSFLPNQSLQ--SDADSELEQNAFSGKLEMETEQPKRSMKRSASEQLETEGKKFISGSRKVSNPAFIAAHSKFEELSSTVNSCRSISSSYQEAGVESED-TISSGAHPIIRTKEIGVAENPALLGPRFQVGGSECGTELSISSTLDSPDISDVGAVEYDREAKVSDERLSN-PNSMKNPDTEAK--DVSTIPASSVS-PVTDQPEKVDAINAESIDSVVAVDSPQIEQRPDSNKSDFQRELHSETGVQVYGSSPEASPRSHMTVLESQGTPSSQVSVKGRKHKSDKSGSSQKRGSLSAGKKSPSNANRDSGARSSVEKLSK-ERNGKRRNSLGSARPDQPDHEPRDSTANSSLPHFMQATESARAKLQANNSPRSSPDVQERDNYIKKRHSLPGANGRQGSPRIQRSMSQAQQGTK--GN----ERKWQR 794
[Close]
BLAST of XM_017402282.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438J3E4 ((Protein IQ-domain 32 {ECO:0000313|EMBL:RVX03445.1}))

HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 395/777 (50.84%), Postives = 523/777 (67.31%), Query Frame = 0
 
Query:   31 SSARGWSFRKRSASHRVLSNTVISEVPSSVNKESPEAVSADYQNQPKAGLPEKSSEMQWTEEVPQLPAAINSKFLEAVVGAEVDTKLDIPPDESVVTVIQTAIRKFLAQRELTKQKNIVTLQAAVRGHLVRRQAVGSLRCVQAIIKMQILVRARHTRLSAEEKRHVKPGRDSSKVKEERKSGAKPGAEYTSIEKLLSNSFARRLLESSPSTKSMNIKCDPSRPDSAWEWMERWVSVSPTEQSPKVEPSTALKDQEILKHP--EN---QVETACADKEDSELTDFTFVATSAAVPYLESDSEEAAVLSKSEQNLASQEFEQ--------------------PQPESQDSTKSSESPQQPLDKPSDS-SPE----VELNNLPSKPELEEEQPKRSVEIVASEHTGTEGRKIVFGSRKASNAAFIAAQSKFEELTSTSNLVNSVNSCNEDNEVESGDITFSSSIDDSVKTKDTNLADDAIPTAPKVLLGGSECGTELSITSTLDSPEQSEFGAVD-GHEVNISEEEMSNLKNTTICIENEARVDDPSIILNTDLSNPLMVQSEKQSDTD------IVNEESSKLEDRSVEIASSMQKKMEHDTVNQMYKSSPEASPRSRVTILDSQTTPSSQVSTKSRKTRSEKNGSSQKRKSLSVGKRSPL-PSNDSGVRSSLEKLPKDEKAGKHRNSFGSAKTDHVDEGRRDSSSSPSVPSYMQATESARAKAYANITPRSSPDVQDKESYIKKRHSLPSANGRQGSPRIQRSTSLAQQSTKESGNVP 769
            S  RGWSFRKRSA HRVLSNTV+SE+PSS NKESPE+ + ++Q    + +PEK+S  QW +E PQL  + NSK  E VV +E ++K+D+  DES    IQ A+R FLAQR L K KN++ LQAAVRGHLVRR AVG+LR VQAI+K+Q LVRAR  +    +    KP   SSK  E+  S A P A YTSI+KLLSN FAR+LLES+P TKS++IKCDPSRP+S W+W+ERW+SVS +      +P   + ++E L+H   EN   QVET    +  SE  D            L+S+  E AV S+SE+NL + + E                     P   +  ++ + +SP +    P+ +  PE     E N++  K E+E EQPKRSV+  ASE   TEG+K VFGSRK SN AF+AAQSKFEEL+ST+N    ++  ++D  VES   T SS+ D SV TKD N  D++IP   ++ +GGSECGTELSITSTLDSP+ SE GA++  +E  +SEE + NL N+T  ++ E++  D S I  ++LS+ ++   EK+   +      +V+ +SS+++ +    AS +Q +++  T  Q Y+SSPEASPRS +T+ +SQ TPSSQVS K+++++++K+GS+QKR SLS GKRSP  P++DSG RSS+E+LPKD+K GK RNSFGS + D+VD+  RDSSSS S+PSYMQATESARAK +AN +PRSSPDVQDK+ YIKKRHSLP ANGRQGSPRIQRS S AQQ  K +G  P
Sbjct:    9 SDKRGWSFRKRSARHRVLSNTVVSEIPSSGNKESPESAAINFQTPVDSTIPEKTSVPQWADEKPQLSTSFNSKASETVVASENESKVDVNVDESAAIAIQAAVRGFLAQRALLKLKNVIKLQAAVRGHLVRRHAVGTLRVVQAIVKIQALVRARRVQAGKLDDGKDKP---SSKPMEKENSSADPSATYTSIDKLLSNGFARQLLESNPRTKSIHIKCDPSRPNSGWQWLERWMSVSSSNLG---QPQIPVLEKEELEHERVENSAVQVETGITSETTSESED------------LKSNVRETAVPSESEENLITYDAESFDFQTCCTTSSSVKDNLELPPSENTGGTSHAKDSPSEIDLLPNHTMQPEEKSLTEFNSVSGKSEMESEQPKRSVKRFASEQLETEGKKFVFGSRKVSNPAFVAAQSKFEELSSTANSGRLISPSHQDVGVESNIETVSSAADTSVTTKDLNTEDNSIPPNSRLQVGGSECGTELSITSTLDSPDISEVGAMEFDNEAKVSEEVICNL-NSTGGLDVESK--DVSTIAVSNLSDTMLAPPEKRDAVNGEPVKSVVDVDSSQVKQKPERTASDLQIELDPQTGRQAYRSSPEASPRSHITVPESQGTPSSQVSVKAKRSKTDKSGSNQKRASLSAGKRSPSNPNHDSGARSSMEQLPKDQKTGKRRNSFGSTRPDNVDQEPRDSSSSNSLPSYMQATESARAKLHANNSPRSSPDVQDKDIYIKKRHSLPGANGRQGSPRIQRSMSQAQQGAKGNGANP 764
Match NameStatsDescription
A0A5B6ZEV7E-Value: 0.000e+0, PID: 51.90DUF4005 domain-containing protein {ECO:0000259|Pfa... [more]
A0A5B6ZFK3E-Value: 0.000e+0, PID: 51.92(Uncharacterized protein {ECO:0000313|EMBL:MPA4289... [more]
F6H068E-Value: 0.000e+0, PID: 51.73DUF4005 domain-containing protein {ECO:0000259|Pfa... [more]
A0A7J7HS85E-Value: 0.000e+0, PID: 49.81DUF4005 domain-containing protein {ECO:0000259|Pfa... [more]
A0A5J5ADQ6E-Value: 0.000e+0, PID: 50.30DUF4005 domain-containing protein {ECO:0000259|Pfa... [more]
A0A4S4EA98E-Value: 0.000e+0, PID: 50.06DUF4005 domain-containing protein {ECO:0000259|Pfa... [more]
A0A2I4DKW0E-Value: 0.000e+0, PID: 50.37(protein IQ-DOMAIN 32 isoform X1 {ECO:0000313|RefS... [more]
A0A2I4DKV0E-Value: 0.000e+0, PID: 50.49(protein IQ-DOMAIN 32 isoform X2 {ECO:0000313|RefS... [more]
A0A6P4AGG9E-Value: 0.000e+0, PID: 50.79(protein IQ-DOMAIN 32 isoform X1 {ECO:0000313|RefS... [more]
A0A438J3E4E-Value: 0.000e+0, PID: 50.84(Protein IQ-domain 32 {ECO:0000313|EMBL:RVX03445.1... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.