Resource Type:
Polypeptide
Name:
XM_017402247.1
Identifier:
XM_017402247.1-protein
Sequence:
MVLDAETIPNVIEALVEVIHAAKDVFFKDSFSKLSASLLGIIPILEELNK
KNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIE
DINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDIL
DKIDSGIQERNIDRANAYKLALMIGQAVGISTQTALKQEFEGFKTEIEDA
KLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPL
QSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETP
LFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLC
EQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKE
IIAKSDDALESIVRSLGRRDGKLAVALLLELSKNDSLRQSIGKVKGCIIY
LVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGP
ADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVK
ALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSLREQAAATIMHLAI
STTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSP
SASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIM
EHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGL
SKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIP
VLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEA
GCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQ
DPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQ
KYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF
Sequence Length:
992
Sequence Checksum:
91563ccae2601e07b2d26cb475afab97
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017402247.1, derives from mRNA, XM_017402247.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z4L3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1270.76 bits (3287), Expect = 0.000e+0
Identity = 647/992 (65.22%), Postives = 788/992 (79.44%), Query Frame = 0
Match: A0A5B6Z4L3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1270.76 bits (3287), Expect = 0.000e+0
Identity = 647/992 (65.22%), Postives = 788/992 (79.44%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRRDG--KLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
AE + IEA++E + AKDVF K +SF++L+ L I+P+L+ELNK+NV D++ LNN +E+L+RE+K K++++ECSKR+KVY + R + KR+ED +EI LSLI L SL++S+ I E++ QLCD+MR AEFK A A E+IL+KI+SGIQERN+DR+ A L + I +A+GIST+ +ALK+EFE FK+EIE+ +LRKDQAEAIQM+QIIALLER DA SS +EKE KY +KR SLG+QPLEPLQSFYCPITREVM DPVETSSG TFER AIE+W A GSNLCP+T L+T + RPNKTLRQSIEEWKDRNTMI+IASM+PKLLS + EE++H L +LQDLCE RD HREWV+LENYIP+L+ L A+NRDIR ALVIL IL+K+ DD KE IAK+D+A+ESIVRSLGRR G KLAVALLLELS+++S+R IG+V+GCI+ LVTMS+S D Q+ARDA +LL+NLSFSD+NVIQMAK NYF+HLL+RLSSGP DV++ MA TLAEM++TDH K SL E GVL SLL L+ GD +MK+VAVKAL NLS LP+NG MIR+G+V LL LLY +SS +LREQ AATI+HLAIST +++ + VSL ESD++I FS I L P VQ+SIL++F A+CQSPSASN+ KL Q +++QVL+QLCELDD NVR NAVKLL CLTE G E I+EHL Q ETL RII TS D +EIASAMGIISNL S QI+EWLL+A GL I DG+ NG KNQLIE A+ AICRFT P N Q QK AE G+IPVLV+LL+ GTSLTKR+AA SLAQFS+S+ L+ PI +R CFSA E GCPVH G CTVESSFCLV+A AV LVR+LG D G CEASLDALLTLI+ RL+SGSKVLDEA+AIP +IKLL+ PSP LQEKVLS LER+F E +QKYG S+QMPLV+LTQRG+++ KS AA+ILA LNVLHEQSSYF
Sbjct: 15 AEVLSQTIEAIIETVVNAKDVFIKKESFAELADYLERIVPLLKELNKRNVSDAEGLNNVVEVLNREIKVAKQLIMECSKRNKVYLLMNCRSIVKRLEDTTREISRVLSLIPLDSLNISSGIIEDITQLCDNMRNAEFKAAIAEEEILEKIESGIQERNVDRSYANNLLVSIAEAIGISTERSALKKEFEEFKSEIENVQLRKDQAEAIQMDQIIALLERADAASSPKEKEIKYFTKRKSLGSQPLEPLQSFYCPITREVMVDPVETSSGHTFERSAIEKWFADGSNLCPLTMTPLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLLSEEEEEVLHYLGQLQDLCELRDQHREWVVLENYIPILIELLGAKNRDIRNHALVILCILAKDGDDAKERIAKADNAIESIVRSLGRRIGERKLAVALLLELSRSESVRDCIGRVQGCILLLVTMSSSDDIQAARDASELLENLSFSDQNVIQMAKANYFKHLLQRLSSGPDDVKMTMATTLAEMELTDHNKLSLLEDGVLGSLLHLVSYGDIEMKKVAVKALNNLSSLPRNGRQMIREGAVGLLLDLLYRHTSSPTLREQVAATIVHLAISTASQDSSGTQVSLLESDEDICRLFSFINLTGPTVQQSILQAFHAMCQSPSASNIKTKLTQFSAVQVLLQLCELDDLNVRANAVKLLCCLTEDGDEATILEHLGQKSIETLLRIIKTSSDEDEIASAMGIISNLPESLQITEWLLDAGGLPIIFSFFHDGKHNGPQKNQLIETAVGAICRFTVPTNPQSQKKVAEAGVIPVLVKLLDLGTSLTKRQAAISLAQFSQSSLGLSWPIQKRKGFCCFSAPPETGCPVHRGICTVESSFCLVKAAAVEPLVRVLGDPDIGACEASLDALLTLIEAERLQSGSKVLDEAKAIPPIIKLLSDPSPRLQEKVLSSLERIFRQVEFKQKYGASAQMPLVDLTQRGNSSTKSLAAKILAHLNVLHEQSSYF 1006
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z6T4 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1269.99 bits (3285), Expect = 0.000e+0
Identity = 647/992 (65.22%), Postives = 787/992 (79.33%), Query Frame = 0
Match: A0A5B6Z6T4 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1269.99 bits (3285), Expect = 0.000e+0
Identity = 647/992 (65.22%), Postives = 787/992 (79.33%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRRDG--KLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
AE + IEA++E + AKDVF K +SF++L+ L I+P+L+ELNK+NV D++ LNN +E+L+RE+K K++++ECSKR+KVY + R + KR+ED +EI LSLI L SL++S+ I E++ QLCD+MR AEFK A A E+IL+KI+SGIQERN+DR+ A L + I +A+GIST+ +ALK+EFE FK+EIE+ +LRKDQAEAIQM+QIIALLER DA SS +EKE KY +KR SLG+QPLEPLQSFYCPITREVM DPVETSSG TFER AIE+W A GSNLCP+T L+T + RPNKTLRQSIEEWKDRNTMI+IASM+PKLLS + EE++H L +LQDLCE RD HREWV+LENYIP+L+ L A+NRDIR ALVIL IL+K+ DD KE IAK+D A+ESIVRSLGRR G KLAVALLLELS+++S+R IG+V+GCI+ LVTMS+S D Q+ARDA +LL+NLSFSD+NVIQMAK NYF+HLL+RLSSGP DV++ MA TLAEM++TDH K SL E GVL SLL L+ GD +MK+VAVKAL NLS LP+NG MIR+G+V LL LLY +SS +LREQ AATI+HLAIST +++ + VSL ESD++I FS I L P VQ+SIL++F A+CQSPSASN+ KL Q +++QVL+QLCELDD NVR NAVKLL CLTE G E I+EHL Q ETL RII TS D +EIASAMGIISNL S QI+EWLL+A GL I DG+ NG KNQLIE A+ AICRFT P N Q QK AE G+IPVLV+LL+ GTSLTKR+AA SLAQFS+S+ L+ PI +R CFSA E GCPVH G CTVESSFCLV+A AV LVR+LG D G CEASLDALLTLI+ RL+SGSKVLDEA+AIP +IKLL+ PSP LQEKVLS LER+F E +QKYG S+QMPLV+LTQRG+++ KS AA+ILA LNVLHEQSSYF
Sbjct: 15 AEVLSQTIEAIIETVVNAKDVFIKKESFAELADYLERIVPLLKELNKRNVSDAEGLNNVVEVLNREIKVAKQLIMECSKRNKVYLLMNCRSIVKRLEDTTREISRVLSLIPLDSLNISSGIIEDITQLCDNMRNAEFKAAIAEEEILEKIESGIQERNVDRSYANNLLVSIAEAIGISTERSALKKEFEEFKSEIENVQLRKDQAEAIQMDQIIALLERADAASSPKEKEIKYFTKRKSLGSQPLEPLQSFYCPITREVMVDPVETSSGHTFERSAIEKWFADGSNLCPLTMTPLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLLSEEEEEVLHYLGQLQDLCELRDQHREWVVLENYIPILIELLGAKNRDIRNHALVILCILAKDGDDAKERIAKADSAIESIVRSLGRRIGERKLAVALLLELSRSESVRDCIGRVQGCILLLVTMSSSDDIQAARDASELLENLSFSDQNVIQMAKANYFKHLLQRLSSGPDDVKMTMATTLAEMELTDHNKLSLLEDGVLGSLLHLVSYGDIEMKKVAVKALNNLSSLPRNGRQMIREGAVGLLLDLLYRHTSSPTLREQVAATIVHLAISTASQDSSGTQVSLLESDEDICRLFSFINLTGPTVQQSILQAFHAMCQSPSASNIKTKLTQFSAVQVLLQLCELDDLNVRANAVKLLCCLTEDGDEATILEHLGQKSIETLLRIIKTSSDEDEIASAMGIISNLPESLQITEWLLDAGGLPIIFSFFHDGKHNGPQKNQLIETAVGAICRFTVPTNPQSQKKVAEAGVIPVLVKLLDLGTSLTKRQAAISLAQFSQSSLGLSWPIQKRKGFCCFSAPPETGCPVHRGICTVESSFCLVKAAAVEPLVRVLGDPDIGACEASLDALLTLIEAERLQSGSKVLDEAKAIPPIIKLLSDPSPRLQEKVLSSLERIFRQVEFKQKYGASAQMPLVDLTQRGNSSTKSLAAKILAHLNVLHEQSSYF 1006
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HLG4 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1226.46 bits (3172), Expect = 0.000e+0
Identity = 630/992 (63.51%), Postives = 786/992 (79.23%), Query Frame = 0
Match: A0A7J7HLG4 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1226.46 bits (3172), Expect = 0.000e+0
Identity = 630/992 (63.51%), Postives = 786/992 (79.23%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFF-KDSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGIST-QTALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
AE + +++A+++++ +K+VF K+SF++L+ L I+P L+E+ +K++ +S LNN + IL+ EVK K+++ ECSKR+KVY V R ++KRIED KEI ALSL+ L+SLD+SA I E ++QL D M+ AEFKTA A E+IL+KI+SGIQERN+DR+ A L I QAVGIST Q+ LK+EFE FK EIE+A+LRKDQAEAIQM+QIIALLER DATSS EKE KY +KRNSLGTQPLEPLQSF CPITREVM DPVETSSG TFER +IE+W A G+NLCP+T I L+T + RPNKTLRQSIEEWKDRNTMI+IASM+PKLL G+ EE++HCL +LQDLCE+RDIHREWVILENYIP+L+ L A++RDIR ALVIL IL+K++DD KE +A ++A+ESIVRSLGRR + KLAVALLLELSK++ ++ IGKV+GCI+ LVTMS+S +SQ+A+DAR+LL+NLSFS++NVIQMAK NYF+HLL+ LSSGP DV+L MARTLAEM++TDH KSSL E GVL SLLQL+ GD +MK+VAVKAL+NLS LP+NG MIR+G+V LL LL H +S +LREQ AAT+M+LAIST ++ E+ VSL ESD++I FS I L P VQ+SILR+F A+CQSPSA+ + +L Q +++QVLV LC+LD N+R NAVKLL CLTE E I+EH++Q TL RII TS D EEIASAMG+ISNL PQI+EWLL AEGL IL L + G +KNQLIENA+ AIC F+ P N Q QK AAE G+IP LV+ LE GT+LTK++AA SLAQFS S+ AL++P P+RH WCFS EA CPVH G CT+ESSFCLVEAGAV LVR+LG + +CEA+LDALLTLI+ RL+SGSKVL EA+AIP +I+LL+V SP LQEKVL LER+F E +QKYG S+QMPLV+LTQRG+++ KS AA+ILA LNVLH+QSSYF
Sbjct: 15 AEFLSQIVQAIIDIVITSKNVFIEKESFAELANYLEQIVPFLKEMMRKDISNSDGLNNVITILNHEVKVAKQLIEECSKRNKVYLLVNCRSIAKRIEDTTKEISRALSLLPLSSLDISAGIIEEISQLSDLMQTAEFKTALAEEEILEKIESGIQERNVDRSYANNLLFSIAQAVGISTEQSVLKKEFEEFKMEIENAQLRKDQAEAIQMDQIIALLERADATSSPNEKEIKYFNKRNSLGTQPLEPLQSFICPITREVMVDPVETSSGHTFERSSIEKWFADGNNLCPLTMIPLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLLVGEDEEVLHCLGQLQDLCEERDIHREWVILENYIPILIELLGAKSRDIRNHALVILCILAKDSDDAKERVANVENAIESIVRSLGRRIAERKLAVALLLELSKSEMVQDCIGKVQGCILLLVTMSSSDESQAAKDARELLENLSFSNQNVIQMAKANYFKHLLQHLSSGPEDVKLIMARTLAEMELTDHNKSSLLEDGVLGSLLQLVSHGDTEMKQVAVKALQNLSTLPKNGLQMIREGAVGPLLDLLCHHTSPQTLREQVAATVMNLAISTASQDLSETQVSLLESDEDICRLFSVISLTRPTVQKSILRAFHAMCQSPSATTIKAQLTQCSAVQVLVPLCDLDG-NIRANAVKLLCCLTEDVDEATILEHMTQKSIGTLLRIIKTSSDEEEIASAMGVISNLPKRPQITEWLLGAEGLPLILRFLQASKSKGSHKNQLIENAVGAICHFSNPTNQQSQKQAAEIGLIPALVQWLELGTTLTKKQAALSLAQFSVSSLALSRPFPKRHGFWCFSPPPEAVCPVHRGICTIESSFCLVEAGAVEPLVRVLGETNLDVCEAALDALLTLIEGERLQSGSKVLAEAKAIPSIIRLLSVSSPGLQEKVLRSLERIFRQVEFKQKYGASAQMPLVDLTQRGNSSTKSLAAKILAHLNVLHDQSSYF 1005
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A1W3A6 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1194.49 bits (3089), Expect = 0.000e+0
Identity = 600/1001 (59.94%), Postives = 764/1001 (76.32%), Query Frame = 0
Match: A0A6A1W3A6 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1194.49 bits (3089), Expect = 0.000e+0
Identity = 600/1001 (59.94%), Postives = 764/1001 (76.32%), Query Frame = 0
Query: 2 VLDAETIP------NVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGIST-QTALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
V A TIP +EA++E++ AA +V FK DSF +L+A L ++P+L+EL++KNV D +NNA+EIL+RE++ K++ LECSKR+KVY + R V KR+E+ EI ALSL LASLD+SA I +++ +LCD M+ AEF+ A A E+IL+KI+SGIQERN+DR+ A L ++I +AVGIST ++ +++E E FK+EIE+ +LRKDQAEAIQM+QIIALLER DATSS EKE +Y +KR SLG+QPLEPLQSFYCPITR+VM DPVETSSGQTFER AIE+W G+ LCP+T L+T + RPNKTLRQSIEEWKDRNTMI+IAS++PKL+S + EE++H LE+L+DLCEQRD+HREWVILENYI +L+ L NRDIR ALVIL IL+K++DD KE I + D+A+E++VRSLGRR + KLAVALLLELSK + +R IGKV+GCI+ LVTMS S D Q+ARDA+ LL+NLSFSD+NVIQMAK NYF+HLL+RLS+GP DV++ MA TLAEM++TDH K SLFE G L LL + GD MKEVA+KAL+NL+ P+NG MIR+G+V LL +LY SSS+SLRE AA TIMHLA+ST + + + PV+L ESD+++ FS I L P+VQ+SIL++FQA+CQSPSA N+ KL Q +++QVLVQL E D+ +VR NAVKL CL E I+EH+SQ ETL +II +S EEI AMGIISNL PQI++WLL+A L IL+H+ +G++N +KN LIENA AICRFT P L+ QK AAE G+IP+LV+LLE GT+L K+ AA SL +FS+S+P L++ IP+R CFSA E C VH G C+++ SFCL+EA AV LVR+LG D G CEASLDAL TLI+ RL+SGSKVL EA AIP +I+ L PSP LQEK L LER+F L E +Q+YG +QMPLV+LTQRG ++KS AARILA LNVLH+QSSYF
Sbjct: 6 VTSASTIPASEVLSQTVEAILEIVLAANNVLFKKDSFKELAAYLERVVPLLKELSRKNVGDFGSINNAVEILNREIRAAKQLTLECSKRNKVYLLMNCRAVVKRLENTVTEISRALSLFPLASLDLSAGISQDIGELCDDMQRAEFRAAIAEEEILEKIESGIQERNVDRSYANNLLVLIAEAVGISTDRSVMRKELEEFKSEIENERLRKDQAEAIQMDQIIALLERADATSSPREKELRYFTKRKSLGSQPLEPLQSFYCPITRDVMMDPVETSSGQTFERTAIEKWFGDGNKLCPLTMTPLDTSILRPNKTLRQSIEEWKDRNTMITIASIKPKLMSEEEEEVLHSLEQLKDLCEQRDLHREWVILENYIALLIQLLGTRNRDIRDHALVILCILAKDSDDAKERIVRVDNAIEAVVRSLGRRVAERKLAVALLLELSKCNVVRDCIGKVQGCILLLVTMSTSDDIQAARDAQALLENLSFSDQNVIQMAKANYFKHLLQRLSTGPEDVKVIMAATLAEMELTDHNKESLFEAGALGPLLHFVSCGDTHMKEVALKALQNLTSSPKNGLQMIREGAVRPLLEVLYQHSSSSSLREHAAGTIMHLALSTMSQESSQIPVALLESDEDVFMLFSLINLTGPDVQQSILQTFQALCQSPSAPNIKTKLTQCSAVQVLVQLSEHDNMHVRANAVKLFSCLVGGADEATILEHVSQKCIETLIKIIKSSKYEEEIVYAMGIISNLPEIPQITQWLLDAGALPVILNHIHNGKQNNAHKNMLIENAAGAICRFTVPTKLEWQKSAAETGVIPLLVQLLELGTTLAKKHAAVSLRRFSESSPGLSRSIPKRKGFLCFSAPPETLCQVHGGICSIKLSFCLLEADAVRPLVRILGEPDPGACEASLDALSTLIEGERLQSGSKVLAEANAIPPIIRFLGSPSPSLQEKALYALERIFRLVEFKQQYGTLAQMPLVDLTQRGRGSMKSLAARILAHLNVLHDQSSYF 1006
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6QMJ3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1194.1 bits (3088), Expect = 0.000e+0
Identity = 606/997 (60.78%), Postives = 779/997 (78.13%), Query Frame = 0
Match: A0A5N6QMJ3 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1194.1 bits (3088), Expect = 0.000e+0
Identity = 606/997 (60.78%), Postives = 779/997 (78.13%), Query Frame = 0
Query: 1 MVLDAETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGIST-QTALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYH-PSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
++ +E + +EA++E++ AA DV K DSF +L+A L ++P+L+ELN+KNV DSQ LNNA++IL+RE++ K++ LECSKR+KVY + R + K +ED KEI ALSL+ LASL++S++I E + LCD+M+ AEFK A A E+IL+KI+SGIQERN+DR+ A L ++I AVGIST ++ALK+EFE FK EIE+A+LRKD+AEAIQM+QIIALLER DATSS EKE KY +KR SLG+QPLEPLQSFYCPITR+VM DPVETSSGQTFER AIE+W + G+ CP+T L+T + RPNKTLRQSIEEWKDRNTMI+IAS++ KL+S + E+++ LE+L DLCEQRD+HREWVILENYIP L+ L A+NRDIR ALVIL IL+K++DD KE I K D+A+ESIVRSLGRR + KLAVALLLELSK++S+R IG V+GC++ LVTMS+S D Q+ARDA+ LL+NLS+SD+NVIQMAK NYF++LL+RLS+GP DV++ MA TLAEM++TDH K SLFE G L LL + GD QM++VA +AL+NLS LP+NG ++R+G+V LL +L+H SSS SLRE A TIM+LA+ST + + E PVSL ESD++I FS I L P+VQ+SI+R+FQA+CQSPSA+N+ KL Q +++QVLVQLCE D+ +VR +AVKL CL E G E I+EH+ Q ETL II +S D EEIASAMGIISNL + +I++WLL+A L+ I ++ +G++ KNQLIENA+ +CRF AP NL+ QK AAE GIIP+LVELL+ GT+LTK+RAA SL +FS+S+ L++ +P+R LWCFSAQ+E CPVH G C+ ESSFCL+EA AV LVR+LG D G+CEASLDALLTLI+ RL+SGSK L +A AI +IK L PSP LQEK L LER+F L E +QKYGG++QMPLV+LTQRG +K+ AAR+LA LNVLH+QSSYF
Sbjct: 11 IIPGSEVLSQTVEAILEIVIAANDVLVKKDSFKELAAYLERVVPVLKELNRKNVNDSQSLNNAIQILNREIRAAKQLTLECSKRNKVYLLMNCRTIVKHLEDTVKEISRALSLLPLASLNISSAISEEIRDLCDNMQRAEFKAAIAEEEILEKIESGIQERNVDRSYANNLLVLIAGAVGISTDRSALKKEFEEFKNEIENARLRKDEAEAIQMDQIIALLERADATSSPREKEIKYFTKRRSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNKSCPLTMNSLDTSVLRPNKTLRQSIEEWKDRNTMIAIASIKQKLMSEE-EDVLQSLEQLLDLCEQRDLHREWVILENYIPNLIQLLGAKNRDIRNHALVILCILAKDSDDAKERIGKVDNAIESIVRSLGRRVAERKLAVALLLELSKSNSVRDCIGDVQGCVLLLVTMSSSDDGQAARDAQALLENLSYSDQNVIQMAKANYFKYLLQRLSTGPEDVKMVMATTLAEMELTDHNKESLFEAGALGPLLHFVSHGDTQMRKVAFRALQNLSSLPKNGLQIVREGAVRPLLDVLFHHSSSSRSLREHVAGTIMNLAVSTVSQGSSEIPVSLLESDEDIFMLFSLINLTGPDVQQSIIRTFQALCQSPSATNIKSKLKQCSAVQVLVQLCEHDNLDVRAHAVKLFCCLAEGGDEATILEHVGQKCIETLLGIIKSSDDEEEIASAMGIISNLPETSEITQWLLDAGALTVIFSYIHNGKQKDPRKNQLIENAVGVLCRFAAPNNLEWQKSAAETGIIPLLVELLQLGTTLTKKRAAISLYRFSESSLGLSRSVPKRKGLWCFSAQSETVCPVHGGICSTESSFCLLEADAVRPLVRILGEPDPGVCEASLDALLTLIEGERLQSGSKALADANAIQPIIKFLGSPSPSLQEKALHALERIFRLMEFKQKYGGAAQMPLVDLTQRGSGNVKALAARVLAHLNVLHDQSSYF 1006
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834YGQ0 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8379970.1}))
HSP 1 Score: 1193.33 bits (3086), Expect = 0.000e+0
Identity = 613/997 (61.48%), Postives = 759/997 (76.13%), Query Frame = 0
Match: A0A834YGQ0 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8379970.1}))
HSP 1 Score: 1193.33 bits (3086), Expect = 0.000e+0
Identity = 613/997 (61.48%), Postives = 759/997 (76.13%), Query Frame = 0
Query: 1 MVLDAETIPNVIEALVEVIHAAKDVFF-KDSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRRDGK--LAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLY-HPSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
+V +E + +EA+VE+I+ A+DV K+SFS+LS L IIP+L+EL++KN +S+ LNN+++IL++E+K K + LECSKR+KVY + R + K +E +EI ALSLI LASLD+S+SI E + LCD+M EF+ A A E+ILDKI+SGIQERN+DRA A L +I AVGIST+ +ALK+EFE FK+ IED +L+K QAEAIQM+QIIALL R DATSS +EKE KY SKRNSLG+QPLEPLQ FYCPITREVM DPVETSSGQTFER AIE+W A G+ CP+T L T RPNKTLRQSIEEWKDRNTMI+IASM+P+L S + + ++H L +LQD+C++RD+HREWV LENYIP+L+ L A+NR+IR ALVIL IL K+NDDTKE I D+A+ESIVRSL RR G+ LAVALLLELSKND LR IGKV+GCI LVTMS+S D+Q+A+DA+ LL+NLSF D+NVIQMAK NYF LL+RLSSG +V++ MA+TLAEM++TDH KSSLFE GVL LL L+ GD +MK+VAVKAL+NLS LP+NG MIR+G+V LL LLY H SSS SLREQ AATIMHLAISTT + ++P++L ESD++I FS I L P+VQ+SIL +F A+CQSPS ++ KL Q +++QVLV LCELD+ +R NAVKL CLTE + + EH+ Q TL RII TS D EEI +AMGIISNL QI++WLL++ L + L DG NG YKNQLIENA+ AI F+ +N + Q+ AAE GIIPVLV+LL G++LTKR AA SL QFS+S+ L++PI +R WCFSA E GCPVH G CTVESSFCLVEA AV LVR+LG D G +ASLDALLTLI+ RL+SGSKVL E AI +IKLLN P LQEK L+ LER+F L E +QKYG S+QMPLV++TQRG++++KS AARILA LNVLHEQSSYF
Sbjct: 11 LVPASEILSQTLEAIVEIINVARDVIIEKESFSELSTYLERIIPLLKELSRKNTGNSESLNNSVQILNQEIKVAKHLALECSKRNKVYLLINCRRIIKHLEHTTREIGRALSLIPLASLDLSSSIDEEIRMLCDNMLTTEFRVAVAEEEILDKIESGIQERNVDRAYANNLLFLIAGAVGISTEGSALKKEFEEFKSTIEDVQLQKFQAEAIQMDQIIALLGRADATSSPKEKELKYFSKRNSLGSQPLEPLQPFYCPITREVMVDPVETSSGQTFERSAIEKWFADGNITCPLTMTPLNTSTLRPNKTLRQSIEEWKDRNTMITIASMKPQLQSDEEQGVLHSLGQLQDICQERDLHREWVALENYIPILIGLLGAKNREIRNRALVILCILVKDNDDTKERIMNVDNAIESIVRSLARRIGESTLAVALLLELSKNDVLRDCIGKVQGCIFLLVTMSSSGDTQAAKDAQTLLENLSFCDQNVIQMAKANYFRPLLQRLSSGTENVKIIMAKTLAEMELTDHIKSSLFENGVLGPLLHLVSHGDAEMKKVAVKALQNLSSLPRNGLQMIREGAVGLLLDLLYRHSSSSPSLREQVAATIMHLAISTTAQEADQTPLTLLESDEDIFRLFSLINLTGPDVQQSILMTFHAMCQSPSGRDIRTKLRQCSAVQVLVHLCELDNLTIRANAVKLFCCLTEDRDDGTLSEHVGQRCIGTLLRIIQTSNDEEEIVAAMGIISNLPKDHQITQWLLDSGALPIVFKFLPDGIHNGSYKNQLIENAVGAISHFSVSKNGEGQRRAAEAGIIPVLVQLLGSGSALTKRHAAISLTQFSESSIMLSRPIEKRGRFWCFSAPVETGCPVHQGICTVESSFCLVEADAVGPLVRVLGEPDLGASDASLDALLTLIEGERLQSGSKVLAEENAIAPIIKLLNSPCVRLQEKALNALERIFRLAEFKQKYGSSAQMPLVDITQRGNSSMKSLAARILAHLNVLHEQSSYF 1007
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061DS61 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1182.55 bits (3058), Expect = 0.000e+0
Identity = 598/992 (60.28%), Postives = 760/992 (76.61%), Query Frame = 0
Match: A0A061DS61 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1182.55 bits (3058), Expect = 0.000e+0
Identity = 598/992 (60.28%), Postives = 760/992 (76.61%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSLREQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
+E + +EA++E + AA DV FK DSF +L+ L I+P+L+ELN+K + +S+ LN+A++IL+RE+K K++ LECS +SKVY + R + KR+ED +EI ALSL+ L SL++S+ I + LCDSM+ AEFK A E+IL+KI++GIQERN DR+ A L ++I +AVGI T+ +ALK+EFE FK+EIE+ +LRKD+AEAIQM+QIIALL R DA SS +EKE KY +KR SLG+QPLEPLQSFYCPITR+VM DPVETSSGQTFER AIE+W G+NLCP+T L+T + RPNKTLRQSIEEWKDRNTMI+IASM+P L SG+ EE++HCL +L+DLCE RD+HREWVILENYIP L+ L +NRDIR LV+LHIL+K+NDD K+ +AK D+A+ES+VRSLGRR + +LAVALLLELSK + LR SIGKV+GCI+ LVTM+N D Q+ARDA ++L+NLSFSD+N+IQMA+ NYF+HLL+RLS+GP DV+L MA TLAEM++TDH K L E G L LL + +GD QMK VAVKALRNLS +P+NG MI+ G+ L+ LL + S SLREQ AATI HLA+ST + + E+PVSL ESD++I FS I L PEVQ++IL+ FQA+CQSP A+N+ KL Q ++IQVLVQLCE D NVR NAVKL CL G E I+EH+ Q ETL RII +S D EE+ASA+GIISNL + QI++WL++A + I LC+GR+N +++QL+ENA+ AICRFTAP NL+ QK AAE G+IP+LV LL GT++TK AATSL++FS S+ L++PIP+ WCFSA E C VH G C+VESSFCLVEA AV LV +L D G+CEASLDALLTLI+ RL+SG KVL EA AI MIK L+ PS LQEK L LER+F L E +QKYG S+QMPLV+LTQRG++++KS +ARILA LNVLH+QSSYF
Sbjct: 15 SEILSQTVEAILETVVAANDVLFKKDSFKELATYLERIVPVLKELNRKYISNSESLNSAIQILNREIKAAKQLTLECSTKSKVYLLMNSRGIVKRLEDTAREISRALSLLPLTSLELSSGIVVEIGNLCDSMQQAEFKAAIGEEEILEKIETGIQERNADRSYANNLLVLIAEAVGIPTERSALKKEFEDFKSEIENVRLRKDKAEAIQMDQIIALLGRADAASSPKEKEMKYFTKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFTEGNNLCPLTMTPLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPNLTSGNEEEVLHCLGQLKDLCE-RDLHREWVILENYIPDLIQLLGGKNRDIRNRVLVMLHILTKDNDDAKDRVAKVDNAIESVVRSLGRRIDERRLAVALLLELSKYNLLRDSIGKVQGCILLLVTMANGDDIQAARDAEEILENLSFSDQNIIQMARANYFKHLLQRLSTGPEDVKLVMATTLAEMELTDHNKVVLLEGGALDPLLDWISQGDIQMKSVAVKALRNLSSVPKNGLQMIKGGAARALVDLLRISTPSPSLREQVAATIKHLAVSTMSQESKETPVSLLESDEDIFMLFSLINLTGPEVQQNILQIFQALCQSPFAANIKTKLTQCSAIQVLVQLCERDIENVRPNAVKLFCCLVNDGDEATILEHVHQRCLETLLRIIQSSNDEEEVASAVGIISNLPENAQITQWLVDAGAIPIIFQLLCNGRQNDSHRSQLVENAVGAICRFTAPTNLEWQKRAAEAGVIPILVHLLYLGTTMTKNHAATSLSRFSLSSRELSRPIPKHKGFWCFSAPPETSCQVHGGICSVESSFCLVEAEAVRPLVMVLEESDPGVCEASLDALLTLIEGERLQSGIKVLAEANAITPMIKFLSSPSLRLQEKALHALERIFRLPEFKQKYGPSAQMPLVDLTQRGNSSMKSLSARILAHLNVLHDQSSYF 1005
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: V4TWT6 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0
Identity = 590/993 (59.42%), Postives = 774/993 (77.95%), Query Frame = 0
Match: V4TWT6 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0
Identity = 590/993 (59.42%), Postives = 774/993 (77.95%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSL-REQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
+E + ++EA++EV+ A+ +V K +SF +L+A L I+P+L+ELNK+++ S+ LN+A+EIL+RE+K K++ ECSKR+KVY + R + KR++D +EI AL ++ LASLD+S I E + ++CD+M+ AEF+ A A E+IL+K++SGIQERN+DR+ A L +I AVGIST+ +ALK+EF+ FK+EIE++++RKDQAEA+QM+QIIALLER DA SS EKE KY SKR SLG+QPLEPLQSFYCPITR+VM DPVETSSGQTFER AIE+W + G+NLCP+T VL+T + RPNKTLRQSIEEWKDRNTMI+IASM+PKL+S +VEE++HCLE+LQDLC+QRD HREWVILENYIP L+ L ++NRD+R AL+ILHIL K+++DTKE +A DDA+ESIVRSLGRR + KLAVALLLELS ++LR IG V+GCI+ LVTM++S D+Q++RDA++LL+NLSFSD+NV+QMAK NYF+HLL+RLS+GP V+++MA TLAEM++TDH+K+SL E VL LL L+ GD QMK+VAVKALRNLS +PQNG MI++G+V L+ LL H SSS+S RE+ A IMHLA+ST + + ++PV+L ESD EI FS I L P VQ+ IL++F A+C+SPSA N+ L Q ++I VLVQLCE D+ NVR NAVKL CL + G E I EH+ Q ETL II +S + EEIASAMGI+S L PQ ++WLL+A L +L+ L +GR+N + Q++ENA+ A+ RFTAP NL+ QK AAE G+IP LV+LLE GT+LTK AATSLA+FSK++ L++PIP+R WCFS E GC VH G C +ESSFCL+EA AV LVR+L D G CEASLDAL+TLI+ RL++GSKVL++A AI M++ L+ PSP LQEK L +ER+F L E +QKYG S+QMPLV+LTQRG++++KS +AR+LA LNVL +QSSYF
Sbjct: 16 SEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 1008
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067H3W0 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0
Identity = 590/993 (59.42%), Postives = 774/993 (77.95%), Query Frame = 0
Match: A0A067H3W0 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0
Identity = 590/993 (59.42%), Postives = 774/993 (77.95%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSL-REQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
+E + ++EA++EV+ A+ +V K +SF +L+A L I+P+L+ELNK+++ S+ LN+A+EIL+RE+K K++ ECSKR+KVY + R + KR++D +EI AL ++ LASLD+S I E + ++CD+M+ AEF+ A A E+IL+K++SGIQERN+DR+ A L +I AVGIST+ +ALK+EF+ FK+EIE++++RKDQAEA+QM+QIIALLER DA SS EKE KY SKR SLG+QPLEPLQSFYCPITR+VM DPVETSSGQTFER AIE+W + G+NLCP+T VL+T + RPNKTLRQSIEEWKDRNTMI+IASM+PKL+S +VEE++HCLE+LQDLC+QRD HREWVILENYIP L+ L ++NRD+R AL+ILHIL K+++DTKE +A DDA+ESIVRSLGRR + KLAVALLLELS ++LR IG V+GCI+ LVTM++S D+Q++RDA++LL+NLSFSD+NV+QMAK NYF+HLL+RLS+GP V+++MA TLAEM++TDH+K+SL E VL LL L+ GD QMK+VAVKALRNLS +PQNG MI++G+V L+ LL H SSS+S RE+ A IMHLA+ST + + ++PV+L ESD EI FS I L P VQ+ IL++F A+C+SPSA N+ L Q ++I VLVQLCE D+ NVR NAVKL CL + G E I EH+ Q ETL II +S + EEIASAMGI+S L PQ ++WLL+A L +L+ L +GR+N + Q++ENA+ A+ RFTAP NL+ QK AAE G+IP LV+LLE GT+LTK AATSLA+FSK++ L++PIP+R WCFS E GC VH G C +ESSFCL+EA AV LVR+L D G CEASLDAL+TLI+ RL++GSKVL++A AI M++ L+ PSP LQEK L +ER+F L E +QKYG S+QMPLV+LTQRG++++KS +AR+LA LNVL +QSSYF
Sbjct: 16 SEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 1008
BLAST of XM_017402247.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2H5P064 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1181.01 bits (3054), Expect = 0.000e+0
Identity = 590/993 (59.42%), Postives = 773/993 (77.84%), Query Frame = 0
Match: A0A2H5P064 (RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483} (2.3.2.27 {ECO:0000256|ARBA:ARBA00012483}))
HSP 1 Score: 1181.01 bits (3054), Expect = 0.000e+0
Identity = 590/993 (59.42%), Postives = 773/993 (77.84%), Query Frame = 0
Query: 5 AETIPNVIEALVEVIHAAKDVFFK-DSFSKLSASLLGIIPILEELNKKNVYDSQVLNNALEILDREVKEFKKVVLECSKRSKVYQFVKYRFVSKRIEDINKEIIHALSLISLASLDVSASIRENVNQLCDSMRAAEFKTATAYEDILDKIDSGIQERNIDRANAYKLALMIGQAVGISTQ-TALKQEFEGFKTEIEDAKLRKDQAEAIQMEQIIALLERGDATSSFEEKEKKYISKRNSLGTQPLEPLQSFYCPITREVMEDPVETSSGQTFERKAIEEWLASGSNLCPMTNIVLETPLFRPNKTLRQSIEEWKDRNTMISIASMRPKLLSGDVEEIIHCLEELQDLCEQRDIHREWVILENYIPVLVSFLRAENRDIRTCALVILHILSKNNDDTKEIIAKSDDALESIVRSLGRR--DGKLAVALLLELSKNDSLRQSIGKVKGCIIYLVTMSNSTDSQSARDARDLLQNLSFSDENVIQMAKTNYFEHLLERLSSGPADVQLKMARTLAEMDITDHYKSSLFEQGVLHSLLQLMKEGDDQMKEVAVKALRNLSDLPQNGWHMIRQGSVSTLLSLLYHPSSSTSL-REQAAATIMHLAISTTVENTGESPVSLFESDDEINTFFSCIILAVPEVQESILRSFQAICQSPSASNVMKKLNQSTSIQVLVQLCELDDHNVRVNAVKLLYCLTEYGTEDNIMEHLSQNLTETLTRIIMTSIDSEEIASAMGIISNLTVSPQISEWLLEAEGLSKILDHLCDGRKNGQYKNQLIENALAAICRFTAPENLQLQKMAAEKGIIPVLVELLEQGTSLTKRRAATSLAQFSKSTPALTKPIPRRHALWCFSAQAEAGCPVHAGFCTVESSFCLVEAGAVASLVRLLGVQDTGLCEASLDALLTLIQDPRLKSGSKVLDEARAIPCMIKLLNVPSPPLQEKVLSCLERMFTLQELRQKYGGSSQMPLVELTQRGHNTIKSSAARILAQLNVLHEQSSYF 992
+E + ++EA++EV+ A+ +V K +SF +L+A L I+P+L+ELNK+++ S+ LN+A+EIL+RE+K K++ ECSKR+KVY + R + KR++D +EI AL ++ LASLD+S I E + ++CD+M+ AEF+ A A E+IL+K++SGIQERN+DR+ A L +I AVGIST+ +ALK+EF+ FK+EIE++++RKDQAEA+QM+QIIALLER DA SS EKE KY SKR SLG+QPLEPLQSFYCPITR+VM DPVETSSGQTFER AIE+W + G+NLCP+T VL+T + RPNKTLRQSIEEWKDRNTMI+IASM+PKL+S +VEE++HCLE+LQDLC+QRD HREWVILENYIP L+ L ++NRD+R AL+ILHIL K+++DTKE +A DDA+ESIVRSLGRR + KLAVALLLELS ++LR IG V+GCI+ LVTM++S D+Q++RDA++LL+NLSFSD+NV+QMAK NYF+HLL+RLS+GP V+++MA TLAEM++TDH+K+SL E VL LL L+ GD QMK+VAVKALRNLS +PQNG MI++G+V L+ LL H SSS+S RE+ A IMHLA+ST + + ++PV+L ESD EI FS I L P VQ+ IL++F A+C+SPSA N+ L Q ++I VLVQLCE D+ NVR NAVKL CL + G E I EH+ Q ETL II +S + EEIASAMGI+S L PQ ++WLL+A L +L+ L +GR+N + Q++ENA+ A+ RFTAP NL+ QK AAE G+IP LV+LLE GT+LTK AATSLA+FSK++ L++PIP+R WCFS E GC VH G C +ESSFCL+EA AV LVR+L D G CEASLDAL+TLI+ RL++GSKVL++A AI M++ L+ PSP LQEK L +ER+F L E +QKYG S+QMPLV+LTQRG +++KS +AR+LA LNVL +QSSYF
Sbjct: 16 SEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGSSSMKSLSARVLAHLNVLQDQSSYF 1008
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6Z4L3 | E-Value: 0.000e+0, PID: 65.22 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A5B6Z6T4 | E-Value: 0.000e+0, PID: 65.22 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A7J7HLG4 | E-Value: 0.000e+0, PID: 63.51 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A6A1W3A6 | E-Value: 0.000e+0, PID: 59.94 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A5N6QMJ3 | E-Value: 0.000e+0, PID: 60.78 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A834YGQ0 | E-Value: 0.000e+0, PID: 61.48 | (Uncharacterized protein {ECO:0000313|EMBL:KAF8379... [more] |
| A0A061DS61 | E-Value: 0.000e+0, PID: 60.28 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| V4TWT6 | E-Value: 0.000e+0, PID: 59.42 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A067H3W0 | E-Value: 0.000e+0, PID: 59.42 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
| A0A2H5P064 | E-Value: 0.000e+0, PID: 59.42 | RING-type E3 ubiquitin transferase {ECO:0000256|AR... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |