Resource Type:
Polypeptide
Name:
XM_017400659.1
Identifier:
XM_017400659.1-protein
Sequence:
MGGSHSREGLDLSDSEYDSESDSQNDVAEDYYDAADDGNSKPSSSSKTLE
NIDAKLQKLKIKPAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYT
ISKTNRNELEELGEDEVDEICGGMDEFWMLRVGSKVRARVSTDLQLKMFG
DQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVK
VYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFE
EAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDN
GGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIET
GRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDM
RDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDG
KIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTL
FTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWV
TEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVP
KDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR
Sequence Length:
642
Sequence Checksum:
196b1e2541abf73f4f550ba8030ecaed
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017400659.1, derives from mRNA, XM_017400659.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
back to top
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1CFE6 ((DEM2 {ECO:0000313|EnsemblPlants:PGSC0003DMT400066344}))
HSP 1 Score: 978.778 bits (2529), Expect = 0.000e+0
Identity = 484/651 (74.35%), Postives = 549/651 (84.33%), Query Frame = 0
Match: M1CFE6 ((DEM2 {ECO:0000313|EnsemblPlants:PGSC0003DMT400066344}))
HSP 1 Score: 978.778 bits (2529), Expect = 0.000e+0
Identity = 484/651 (74.35%), Postives = 549/651 (84.33%), Query Frame = 0
Query: 1 MGGSHSREGLDLSD-SEY-DSESDSQNDVAEDYYDAADDGNS--KPSSSSKTLENIDAKLQKLKIK---PAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVD-EICGGMDE-FWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG SHSREGL+LSD S+Y D E ++ + E Y DAADD +S P S+KTL+ +D+KL+ LK+K P R N+VKLYLHVGGNT +AKWI+++K TYY KT L+ G+DE D E G DE FW+L+VG K++ RVSTD+QLKMFGDQRRVDFV+ GVWAL+FF D+ YR F+ FQDC FENVYGM A+E +KVK+YGK+F+GW+KPE +DD MWEDAD GVWK K+ + +SQ+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFD K G STPKKALLMRGETNM+LMSP K+GKP + GL+QLDIETG+VVTEWKFEKDG DI+M+DITND+KGSQLD SESTFLGLDDNRLCQWDMRD+ G+VQT+AN++SPVL+W QGHQFSRGTNFQCFA+TGDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDKDGKTKTGF GRMGNKIPAPRLLKLTPVD+H+AG NNKFHGG FSWVTE GKQERHLVA VGKFSV+WNFQQVK+SAH CY NQQGLKSCYCYKIVPKDESIIESRFMHDK+A+ +SPEAPLVVATPMKV+S SMSGK+
Sbjct: 1 MGASHSREGLELSDESDYEDDEGSTRTESEEQYEDAADDHSSMRTPPVSNKTLDELDSKLKALKLKYGSPETPTNLR--NAVKLYLHVGGNTPKAKWIISQKLTYYEFVKT----LQIGGDDEDDYESSSGGDEGFWVLKVGKKIKVRVSTDMQLKMFGDQRRVDFVDNGVWALKFFVDDEYRNFITKFQDCFFENVYGMEATEANKVKIYGKEFIGWLKPEESDDAMWEDADSGVWKGSGKSPMTPVRDSQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDEKDKWSGG-----STPKKALLMRGETNMMLMSPFKEGKPRSTGLHQLDIETGKVVTEWKFEKDGTDITMKDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDKKGIVQTLANTSSPVLNWTQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKDGKTKTGFTGRMGNKIPAPRLLKLTPVDAHIAGANNKFHGGHFSWVTESGKQERHLVAAVGKFSVIWNFQQVKDSAHRCYQNQQGLKSCYCYKIVPKDESIIESRFMHDKYAVNDSPEAPLVVATPMKVTSISMSGKK 638
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2AXI4 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 972.615 bits (2513), Expect = 0.000e+0
Identity = 474/647 (73.26%), Postives = 545/647 (84.23%), Query Frame = 0
Match: A0A6N2AXI4 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 972.615 bits (2513), Expect = 0.000e+0
Identity = 474/647 (73.26%), Postives = 545/647 (84.23%), Query Frame = 0
Query: 1 MGGSHSREGLDLSD-SEY-DSESDSQNDVAEDYYDAADDGNS--KPSSSSKTLENIDAKLQKLKIKPAQNLEKRS-ENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVDEICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG SHSREGL+LSD S+Y D E S+ + E Y DAADD S P S+K L+ +D+KL+ LK+K + + N+VKLYLHVGGNT +AKWI+++K T Y KT + +E ED+ + GG + FW+L+VG K++ RVSTD+QLKMFGDQRRVDFV+ GVWAL+FF D+ YR F+ FQDCLFENVYGM A+E +KVK+YGK+F+GW+KPE +DD MWEDAD G+WK K+ + + Q+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFD K G STPKKALLMRGETNM+LMSP K+GKP + GL+QLDIETG+VVTEWKFEKDG DI+M+DITND+KGSQLD SESTFLGLDDNRLCQWDMRD+ G+VQT+AN++SPVL+W QGHQFSRGTNFQCFA+TGDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDK GKTKTGF GRMGNKIPAPRLLKLTPVD+H+AG NNKFHGG FSWVTE GK+ERHLVA VGKFSV+WNFQQVK+SAH CY NQQGLKSCYCYKIVPKDESIIESRFMHDK+A+++SPEAPLVVATPMKV+S SMSGK+
Sbjct: 1 MGASHSREGLELSDESDYEDEEGSSRTESEEQYEDAADDHASMRTPQVSNKNLDELDSKLKALKLKYGSPVTPTNLRNAVKLYLHVGGNTPKAKWIISQKLTNYEFVKTLKIGGDE--EDDYESSSGGDEGFWVLKVGKKIKVRVSTDMQLKMFGDQRRVDFVDNGVWALKFFVDDEYRNFITKFQDCLFENVYGMEATEANKVKIYGKEFIGWLKPEESDDAMWEDADSGIWKGSGKSPMTPARDRQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDEKDKWSGG-----STPKKALLMRGETNMMLMSPFKEGKPRSTGLHQLDIETGKVVTEWKFEKDGTDITMKDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDKKGIVQTLANTSSPVLNWTQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKAGKTKTGFTGRMGNKIPAPRLLKLTPVDAHIAGANNKFHGGHFSWVTESGKEERHLVAAVGKFSVIWNFQQVKDSAHRCYQNQQGLKSCYCYKIVPKDESIIESRFMHDKYAVSDSPEAPLVVATPMKVTSISMSGKK 638
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WCX2 ((protein CYPRO4-like {ECO:0000313|RefSeq:XP_027112481.1}))
HSP 1 Score: 972.615 bits (2513), Expect = 0.000e+0
Identity = 483/652 (74.08%), Postives = 554/652 (84.97%), Query Frame = 0
Match: A0A6P6WCX2 ((protein CYPRO4-like {ECO:0000313|RefSeq:XP_027112481.1}))
HSP 1 Score: 972.615 bits (2513), Expect = 0.000e+0
Identity = 483/652 (74.08%), Postives = 554/652 (84.97%), Query Frame = 0
Query: 1 MGGSHSREGLDLSDSEYDSESDSQ-NDVAEDYYDAADDGNSKPS------SSSKTLENIDAKLQKLKIK-PAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVDEICGGMDE--FWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG S SREGL+LSDSE + + D + + +ED Y+ A G+ P+ S S TL+ +D++L+ LK++ PA SEN+VKLYLH+GGNT +AKW+V++K T+Y KT++ +++ G D ++ + FW+L+VG KVRARVSTD+QLK FG+QRRVDFV+ GVWAL+F +DE YR FV FQDCLFENVYG+RA+E++K+KVYGK+F+GWVKPE +DD MWE AD+GVWKS K S ESQ+LLEEFEEAA+ GGIQSL+LGALDNSFLV SGVQVVKNFSHGIHGKGVYVKFDNGGKRG G +STPKK+LLMRGETNMLLMSPLKDGKP + GL+QLDIETG++VTEWKF KDG DI+MRDITND+KGSQLD SESTFLGLDDNRLCQWDMRDR GMVQ IA+++SPVL+W+QGHQFSRGTNFQCFA+ GDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDKDGKTKT F GR GNKIPAPRLLKLTPVDSHMAG +NKFHGG FSWVTE GKQERHLVATVGKFSV+WNFQQVKNSAHHCY NQQGLKSCYCYKIV KDESI+ESRFMHDKFA++NSPEAPLVVATPMKV+SFSMSGKR
Sbjct: 1 MGASQSREGLELSDSESEYDDDDKGEEESEDQYEDAAAGDRTPTKTSSSRSGSITLDEVDSRLKSLKLRYPASAPSPVSENAVKLYLHIGGNTPKAKWVVSDKLTFYKFIKTSK--IDKSGGDHEEDWEEESEGEGFWVLKVGKKVRARVSTDMQLKFFGEQRRVDFVDHGVWALKFLADEEYRAFVTKFQDCLFENVYGLRATEDNKLKVYGKEFIGWVKPEESDDAMWEAADEGVWKS-PKDSPAVVRESQDLLEEFEEAAS--DGGIQSLSLGALDNSFLVGDSGVQVVKNFSHGIHGKGVYVKFDNGGKRGSSSMG-HSTPKKSLLMRGETNMLLMSPLKDGKPRSTGLHQLDIETGKIVTEWKFAKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRRGMVQNIASADSPVLNWSQGHQFSRGTNFQCFATAGDGSIVVGSLDGKIRLYSRTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKDGKTKTAFSGRAGNKIPAPRLLKLTPVDSHMAGADNKFHGGHFSWVTESGKQERHLVATVGKFSVIWNFQQVKNSAHHCYQNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVSNSPEAPLVVATPMKVTSFSMSGKR 646
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B341 (AP2/ERF domain-containing protein {ECO:0000259|PROSITE:PS51032})
HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0
Identity = 474/624 (75.96%), Postives = 541/624 (86.70%), Query Frame = 0
Match: A0A5J5B341 (AP2/ERF domain-containing protein {ECO:0000259|PROSITE:PS51032})
HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0
Identity = 474/624 (75.96%), Postives = 541/624 (86.70%), Query Frame = 0
Query: 23 SQNDVAEDYYDAADDGNSKPSSSSKTLENIDAKLQKLKIK-PAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVDEICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKS---GEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
S A+D + + +S SKTL+ +DA+L+ LK+K P+QN +++VKLYLH+GGNT +AKW+VA+K TYY K+++ + ++ +D+ GG + W+L+V SK+RARVSTD+QLKMFGDQRRVDFV GVWAL+FF DE YR F+ FQDCLFENVYG++A++E+KVKVYGKDF+GW KPEVADD+MWE A+DGVWKS G +T +R +Q+LLEEFEEAAT GGGIQSLALGALDNSFLVS SGVQVVKNFSHGIHGKGVYVKFDNGG +G +G STPKKALLMRGETNMLLMSPLK+GKPH+ GL+QLDIETG++VTEWKFEKDG D++MRDITND+KGSQLD SESTFLGLDDNRLCQWDMRDR GMVQ I N+NSPVLHW QGHQFSRGTNFQCFA+ GDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSP+THVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAG ++KFHGGQFSWVTE GKQERHLVATVGKFSV+W+FQQVKNSAH CY NQQGLKSCYCYKIV KDESI++SRFMHDKFA+++SPEAPLVVATPMKV+SFSMSGKR
Sbjct: 261 SNTTYAQDVEEQQQKPQTSSASGSKTLDELDARLKALKLKYPSQN--PNFKDAVKLYLHIGGNTPKAKWVVADKLTYYKFIKSSKIDGDDGVDDDDGGELGGAEGSWILKVSSKIRARVSTDMQLKMFGDQRRVDFVCNGVWALKFFGDEDYRNFLTKFQDCLFENVYGLKATDENKVKVYGKDFIGWAKPEVADDSMWEAAEDGVWKSPGLGTETPVR---ANQDLLEEFEEAAT--GGGIQSLALGALDNSFLVSDSGVQVVKNFSHGIHGKGVYVKFDNGGYKGSSSAG-RSTPKKALLMRGETNMLLMSPLKEGKPHSTGLHQLDIETGKIVTEWKFEKDGTDLTMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGMVQNIVNANSPVLHWTQGHQFSRGTNFQCFATAGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPVTHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGADSKFHGGQFSWVTENGKQERHLVATVGKFSVIWSFQQVKNSAHECYQNQQGLKSCYCYKIVLKDESIVDSRFMHDKFAVSDSPEAPLVVATPMKVTSFSMSGKR 876
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7ESR9 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 477/649 (73.50%), Postives = 545/649 (83.98%), Query Frame = 0
Match: A0A3Q7ESR9 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 477/649 (73.50%), Postives = 545/649 (83.98%), Query Frame = 0
Query: 1 MGGSHSREGLDLSD-SEY-DSESDSQNDVAEDYYDAADDGNS--KPSSSSKTLENIDAKLQKLKIKPAQNLEKRS-ENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVD--EICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG SHSREGL+LSD S+Y D E S+ + E Y DAADD S P S++ L+ +D+KL+ LK+K + + N+VKLYLHVGGNT +AKWI+++K T Y KT L+ G+DE D GG + FW+L+VG K++ RVSTD+QLKMFGDQRRVDFV+ GVWAL+FF D+ YR F+ FQDCLFENVYGM A+E +KVK+YGK+F+GW+KPE +DD MWEDAD GVWK K+ + + Q+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFD K G STPKKALLMRGETNM+LMSP K+GKP + GL+QLDIETG+VVTEWKFEKDG DI+M+DITND+KGSQLD SESTFLGLDDNRLCQWDMRD+ G+VQT+AN++SPVL+W QGHQFSRGTNFQCFA+TGDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDK GKTKTGF GRMGNKIPAPRLLKLTPVD+H+AG NN+FHGG FSWVTE GKQERHLVA VGKFSV+WNFQQVK+SAH CY NQQGLKSCYCYKIVPKDESIIESRFMHDK+A+++SPEAPLVVATPMKV+S SMSGKR
Sbjct: 1 MGASHSREGLELSDESDYEDEEGSSRTESEEQYEDAADDHASMRTPQVSNRNLDELDSKLKALKLKYGSPVTPTNLRNAVKLYLHVGGNTPKAKWIISQKLTNYEFVKT----LKIGGDDEDDYGSSSGGDEGFWVLKVGKKIKVRVSTDMQLKMFGDQRRVDFVDNGVWALKFFVDDEYRNFITKFQDCLFENVYGMEATEANKVKIYGKEFIGWLKPEESDDAMWEDADSGVWKGSGKSPMTPARDRQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDEKDKWSGG-----STPKKALLMRGETNMMLMSPFKEGKPRSTGLHQLDIETGKVVTEWKFEKDGTDITMKDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDKKGIVQTLANTSSPVLNWTQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKAGKTKTGFTGRMGNKIPAPRLLKLTPVDAHIAGANNEFHGGHFSWVTESGKQERHLVAAVGKFSVIWNFQQVKDSAHRCYQNQQGLKSCYCYKIVPKDESIIESRFMHDKYAVSDSPEAPLVVATPMKVTSISMSGKR 638
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HIC4 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 491/646 (76.01%), Postives = 552/646 (85.45%), Query Frame = 0
Match: A0A7J7HIC4 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 491/646 (76.01%), Postives = 552/646 (85.45%), Query Frame = 0
Query: 1 MGGSHSREGLDLSDSEYDSESDSQNDVAEDYYDAADDG--NSKPSSS--SKTLENIDAKLQKLKIKPAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVDEICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MGGS SREGLDLSD E D E + ++ D DD SKP +S SKTL+++D+KL+ LK+K + S+ SVKLYLHVGGNT +AKW+V++K T Y K N + ++ ED G + W+L+VG K+RARVSTD+QLKMFGDQRRVDFV GVWAL+FF DE YR FV FQDCLFENVYG++A +E+KVK+YGK+FMGWVKPE ADD++WEDADDGVWKS EKTS+R SQ+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFDNGG+ G S + STPKKALLMRGETNMLLMSPLK+GKPH+ GL+QLDIETG++VT+WKFEKDG DI+MRDITND+KGSQLD SESTFLGLDDNRLCQWDMRDR GMVQ IA++NSPVL W QGHQFSRGTNFQCFA+TGDGSIVVGS+DGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDG+TK GFGGRMGNKIPAPRLLKLTPVDSHM+G +NKF GGQFSWVTE GKQERHLVATVGKFSV+WNFQQVKNS H CY NQQGLKSCYCYKIV KDESI++SRFMHD+FA+++SPEAPLVVATPMKV+SFSMSGKR
Sbjct: 1 MGGSQSREGLDLSDYEDDDEEEEHSEDQNDDAQDHDDDRHQSKPQTSFGSKTLDDLDSKLKALKLKYPSSQNPNSKYSVKLYLHVGGNTPKAKWVVSDKLTSYQFVKKNDDYDDDEEEDRSGR---GGENCWVLKVGLKIRARVSTDMQLKMFGDQRRVDFVWNGVWALKFFGDEEYRSFVTEFQDCLFENVYGLKAIDENKVKIYGKEFMGWVKPESADDSVWEDADDGVWKSPEKTSVR---ASQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDNGGQMG-SSSAAKSTPKKALLMRGETNMLLMSPLKEGKPHSTGLHQLDIETGKIVTQWKFEKDGTDITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGMVQNIASANSPVLQWTQGHQFSRGTNFQCFATTGDGSIVVGSIDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGRTKNGFGGRMGNKIPAPRLLKLTPVDSHMSGTDNKFQGGQFSWVTENGKQERHLVATVGKFSVIWNFQQVKNSGHECYQNQQGLKSCYCYKIVLKDESIVDSRFMHDRFAVSDSPEAPLVVATPMKVTSFSMSGKR 637
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4V3WLR8 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 968.763 bits (2503), Expect = 0.000e+0
Identity = 491/649 (75.65%), Postives = 551/649 (84.90%), Query Frame = 0
Match: A0A4V3WLR8 (VID27 domain-containing protein {ECO:0000259|Pfam:PF08553})
HSP 1 Score: 968.763 bits (2503), Expect = 0.000e+0
Identity = 491/649 (75.65%), Postives = 551/649 (84.90%), Query Frame = 0
Query: 1 MGGSHSREGLDLSDSEYDSESDSQNDVAEDYYDAADDG--NSKPSSS--SKTLENIDAKLQKLKIKPAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEEL---GEDEVDEICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MGGS SREGLDLSD E D E + ++ D DD SKP +S SKTL+++D+KL+ LK+K + S+ SVKLYLHVGGNT +AKW+V++K T Y K N + ++ G E C W+L+VG K+RARVSTD+QLKMFGDQRRVDF+ GVWAL+FF DE YR FV FQDCLFENVYG++A +E+KVK+YGK+FMGWVKPE ADD+MWEDADDGVWKS EKTS+R SQ+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFDNGG+ G S + STPKKALLMRGETNMLLMSPLK+GKPH+ GL+QLDIETG++VT+WKFEKDG DI+MRDITND+KGSQLD SESTFLGLDDNRLCQWDMRDR GMVQ IA++NSPVL W QGHQFSRGTNFQCFA+TGDGSIVVGS+DGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDG+TK GFGGRMGNKIPAPRLLKLTPVDSHM+G +NKF GGQFSWVTE GKQERHLVATVGKFSV+WNFQQVKNS H CY NQQGLKSCYCYKIV KDESI++SRFMHD+FA+++SPEAPLVVATPMKV+SFSMSGKR
Sbjct: 1 MGGSQSREGLDLSDYEDDDEEEEHSEDQNDDAQDHDDDRHQSKPQTSFGSKTLDDLDSKLKALKLKYPSSQNPNSKYSVKLYLHVGGNTPKAKWVVSDKLTSYQFVKKNDDYDDDEEEDGSGRGGENC------WVLKVGLKIRARVSTDMQLKMFGDQRRVDFLWNGVWALKFFGDEEYRSFVTEFQDCLFENVYGLKAIDENKVKIYGKEFMGWVKPESADDSMWEDADDGVWKSPEKTSVR---ASQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDNGGQMG-SSSAAKSTPKKALLMRGETNMLLMSPLKEGKPHSTGLHQLDIETGKIVTQWKFEKDGTDITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGMVQNIASANSPVLQWTQGHQFSRGTNFQCFATTGDGSIVVGSIDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGRTKNGFGGRMGNKIPAPRLLKLTPVDSHMSGTDNKFQGGQFSWVTENGKQERHLVATVGKFSVIWNFQQVKNSGHECYQNQQGLKSCYCYKIVLKDESIVDSRFMHDRFAVSDSPEAPLVVATPMKVTSFSMSGKR 637
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q6VVW8 ((DEM2 {ECO:0000313|EMBL:AAQ90244.1}))
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 475/649 (73.19%), Postives = 544/649 (83.82%), Query Frame = 0
Match: Q6VVW8 ((DEM2 {ECO:0000313|EMBL:AAQ90244.1}))
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 475/649 (73.19%), Postives = 544/649 (83.82%), Query Frame = 0
Query: 1 MGGSHSREGLDLSD-SEY-DSESDSQNDVAEDYYDAADDGNS--KPSSSSKTLENIDAKLQKLKIKPAQNLEKRS-ENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVD--EICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG SHSREGL+LSD S+Y D E S+ + E Y DAADD S P S++ L+ +D+KL+ LK+K + + N+VKLYLHVGGNT +AKWI+++K T Y KT L+ G+DE D GG + FW+L+VG K++ RVSTD+QLKMFGDQRR+DFV+ GVWAL+FF D+ YR F+ FQDCLFENVYGM A+E +KVK+YGK+F+GW+KPE +DD MWEDAD GVWK K+ + + Q+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFD K G STPKKALLMRGETNM+LMSP K+GKP + GL+QLDIETG+VVTEWKFEKDG DI+M+DITND+KGSQLD SEST LGLDDNRLCQWDMRD+ G+VQT+AN++SPVL+W QGHQFSRGTNFQCFA+TGDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDK GKTKTGF GRMGNKIPAPRLLKLTPVD+H+AG NN+FHGG FSWVTE GKQERHLVA VGKFSV+WNFQQVK+SAH CY NQQGLKSCYCYKIVPKDESIIESRFMHDK+A+++SPEAPLVVATPMKV+S SMSGKR
Sbjct: 1 MGASHSREGLELSDESDYEDEEGSSRTESEEQYEDAADDHASMRTPQVSNRNLDELDSKLKALKLKYGSPVTPTNLRNAVKLYLHVGGNTPKAKWIISQKLTNYEFVKT----LKIGGDDEDDYGSSSGGDEGFWVLKVGKKIKVRVSTDMQLKMFGDQRRIDFVDNGVWALKFFVDDEYRNFITKFQDCLFENVYGMEATEANKVKIYGKEFIGWLKPEESDDAMWEDADSGVWKGSGKSPMTPARDRQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDEKDKWSGG-----STPKKALLMRGETNMMLMSPFKEGKPRSTGLHQLDIETGKVVTEWKFEKDGTDITMKDITNDTKGSQLDPSESTLLGLDDNRLCQWDMRDKKGIVQTLANTSSPVLNWTQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKAGKTKTGFTGRMGNKIPAPRLLKLTPVDAHIAGANNEFHGGHFSWVTESGKQERHLVAAVGKFSVIWNFQQVKDSAHRCYQNQQGLKSCYCYKIVPKDESIIESRFMHDKYAVSDSPEAPLVVATPMKVTSISMSGKR 638
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q6VVW7 ((DEM2 {ECO:0000313|EMBL:AAQ90245.1}))
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 475/649 (73.19%), Postives = 544/649 (83.82%), Query Frame = 0
Match: Q6VVW7 ((DEM2 {ECO:0000313|EMBL:AAQ90245.1}))
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 475/649 (73.19%), Postives = 544/649 (83.82%), Query Frame = 0
Query: 1 MGGSHSREGLDLSD-SEY-DSESDSQNDVAEDYYDAADDGNS--KPSSSSKTLENIDAKLQKLKIKPAQNLEKRS-ENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVD--EICGGMDEFWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG SHSREGL+LSD S+Y D E S+ + E Y DAADD S P S++ L+ +D+KL+ LK+K + + N+VKLYLHVGGNT +AKWI+++K T Y KT L+ G+DE D GG + FW+L+VG K++ RVSTD+QLKMFGDQRRVDFV+ GVWAL+FF D+ YR F+ FQDCLFENVYGM A+E +KVK+YGK+F+GW+KPE +DD MWEDAD GVWK K+ + + Q+LLEEFEEAAT GGGIQSLALGALDNSFLV+ SGVQVVKNFSHGIHGKGVYVKFD K G STPKKALLMRGETNM+LMSP K+GKP + GL+QLDIETG+VVTEWKFEK+G DI+M+DITND+KGSQLD SEST LGLDDNRLCQWDMRD+ G+VQT+AN++SPVL+W QGHQFSRGTNFQCFA+TGDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDK GKTKTGF GRMGNKIPAPRLLKLTPVD+H+AG NN+FHGG FSWVTE GKQERHLVA VGKFSV+WNFQQVK+SAH CY NQQGLKSCYCYKIVPKDESIIESRFMHDK+A+++SPEAPLVVATPMKV+S SMSGKR
Sbjct: 1 MGASHSREGLELSDESDYEDEEGSSRTESEEQYEDAADDHASMRTPQVSNRNLDELDSKLKALKLKYGSPVTPTNLRNAVKLYLHVGGNTPKAKWIISQKLTNYEFVKT----LKIGGDDEDDYGSSSGGDEGFWVLKVGKKIKVRVSTDMQLKMFGDQRRVDFVDNGVWALKFFVDDEYRNFITKFQDCLFENVYGMEATEANKVKIYGKEFIGWLKPEESDDAMWEDADSGVWKGSGKSPMTPARDRQDLLEEFEEAAT--GGGIQSLALGALDNSFLVNDSGVQVVKNFSHGIHGKGVYVKFDEKDKWSGG-----STPKKALLMRGETNMMLMSPFKEGKPRSTGLHQLDIETGKVVTEWKFEKNGTDITMKDITNDTKGSQLDPSESTLLGLDDNRLCQWDMRDKKGIVQTLANTSSPVLNWTQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKAGKTKTGFTGRMGNKIPAPRLLKLTPVDAHIAGANNEFHGGHFSWVTESGKQERHLVAAVGKFSVIWNFQQVKDSAHRCYQNQQGLKSCYCYKIVPKDESIIESRFMHDKYAVSDSPEAPLVVATPMKVTSISMSGKR 638
BLAST of XM_017400659.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VTW5 ((protein CYPRO4-like {ECO:0000313|RefSeq:XP_027105935.1}))
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 484/652 (74.23%), Postives = 554/652 (84.97%), Query Frame = 0
Match: A0A6P6VTW5 ((protein CYPRO4-like {ECO:0000313|RefSeq:XP_027105935.1}))
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 484/652 (74.23%), Postives = 554/652 (84.97%), Query Frame = 0
Query: 1 MGGSHSREGLDLSDSEYDSESDSQ-NDVAEDYYDAADDGNSKPSSSSK------TLENIDAKLQKLKIK-PAQNLEKRSENSVKLYLHVGGNTAQAKWIVAEKHTYYTISKTNRNELEELGEDEVDEICGGMDE--FWMLRVGSKVRARVSTDLQLKMFGDQRRVDFVERGVWALRFFSDESYRRFVGLFQDCLFENVYGMRASEESKVKVYGKDFMGWVKPEVADDTMWEDADDGVWKSGEKTSLRDDSESQNLLEEFEEAATAGGGGIQSLALGALDNSFLVSGSGVQVVKNFSHGIHGKGVYVKFDNGGKRGIGGSGSNSTPKKALLMRGETNMLLMSPLKDGKPHAMGLNQLDIETGRVVTEWKFEKDGCDISMRDITNDSKGSQLDHSESTFLGLDDNRLCQWDMRDRAGMVQTIANSNSPVLHWNQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSNKSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFTDKDGKTKTGFGGRMGNKIPAPRLLKLTPVDSHMAGKNNKFHGGQFSWVTEGGKQERHLVATVGKFSVVWNFQQVKNSAHHCYHNQQGLKSCYCYKIVPKDESIIESRFMHDKFALTNSPEAPLVVATPMKVSSFSMSGKR 642
MG S SREGL+LSDSE + + D + + +ED Y+ A + PS +S TL+ +D++L+ LK+K PA SEN+VKLYLH+GGNT +AKW+V++K T+Y KT++ +++ G D ++ + FW+L+VG KVRARVSTD+QLK FG+QRRVDFV+ GVWAL+F +DE YR FV FQDCLFENVYG+RA+E++K+KVYGK+F+GWVKPE +DD MWEDAD+GVWKS K S ESQ+LLEEFEEAA+ GGIQSL+LGALDNSFLV SGVQVVKNFSHGIHGKGVYVKFDNGGKRG G +STPKK+LLMRGETNMLLMSPLKDGKP + GL+QLDIETG++VTEWKF KDG DI+MRDITND+KGSQLD SESTFLGLDDNRLCQWDMRDR GMVQ IA+++SPVL+W+QGHQFSRGTNFQCFA+ GDGSIVVGSLDGKIRLYS SMRQAKTAFPGLGSPITHVDVTYDGKW+LGTTDTYLILICTLFTDKDGKTKT F GR GNKIPAPRLLKLTPVDSHMAG +NKFHGG FSWVTE GKQERHLVATVGKFSV+WNFQQVKNSAHHCY NQQGLKSCYCYKIV KDESI+ESRFMHDKFA++NSPEAPLVVATPMKV+SFSMSGKR
Sbjct: 1 MGASQSREGLELSDSESEYDDDDKGEEESEDQYEDAAAADRTPSKTSSSRSGSITLDEVDSRLKSLKLKYPASAPSPVSENAVKLYLHIGGNTPKAKWVVSDKLTFYKFIKTSK--IDKSGGDHEEDWEEESEGEGFWVLKVGKKVRARVSTDMQLKFFGEQRRVDFVDHGVWALKFLADEEYRAFVTKFQDCLFENVYGLRATEDNKLKVYGKEFIGWVKPEESDDAMWEDADEGVWKS-PKDSPAVVRESQDLLEEFEEAAS--DGGIQSLSLGALDNSFLVGDSGVQVVKNFSHGIHGKGVYVKFDNGGKRGSLSMG-HSTPKKSLLMRGETNMLLMSPLKDGKPRSTGLHQLDIETGKIVTEWKFAKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRRGMVQNIASADSPVLNWSQGHQFSRGTNFQCFATAGDGSIVVGSLDGKIRLYSRTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFTDKDGKTKTAFSGRAGNKIPAPRLLKLTPVDSHMAGADNKFHGGHFSWVTESGKQERHLVATVGKFSVIWNFQQVKNSAHHCYQNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVSNSPEAPLVVATPMKVTSFSMSGKR 646
| Match Name | Stats | Description |
|---|---|---|
| M1CFE6 | E-Value: 0.000e+0, PID: 74.35 | (DEM2 {ECO:0000313|EnsemblPlants:PGSC0003DMT400066... [more] |
| A0A6N2AXI4 | E-Value: 0.000e+0, PID: 73.26 | VID27 domain-containing protein {ECO:0000259|Pfam:... [more] |
| A0A6P6WCX2 | E-Value: 0.000e+0, PID: 74.08 | (protein CYPRO4-like {ECO:0000313|RefSeq:XP_027112... [more] |
| A0A5J5B341 | E-Value: 0.000e+0, PID: 75.96 | AP2/ERF domain-containing protein {ECO:0000259|PRO... [more] |
| A0A3Q7ESR9 | E-Value: 0.000e+0, PID: 73.50 | VID27 domain-containing protein {ECO:0000259|Pfam:... [more] |
| A0A7J7HIC4 | E-Value: 0.000e+0, PID: 76.01 | VID27 domain-containing protein {ECO:0000259|Pfam:... [more] |
| A0A4V3WLR8 | E-Value: 0.000e+0, PID: 75.65 | VID27 domain-containing protein {ECO:0000259|Pfam:... [more] |
| Q6VVW8 | E-Value: 0.000e+0, PID: 73.19 | (DEM2 {ECO:0000313|EMBL:AAQ90244.1})[more] |
| Q6VVW7 | E-Value: 0.000e+0, PID: 73.19 | (DEM2 {ECO:0000313|EMBL:AAQ90245.1})[more] |
| A0A6P6VTW5 | E-Value: 0.000e+0, PID: 74.23 | (protein CYPRO4-like {ECO:0000313|RefSeq:XP_027105... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |