XM_017402207.1

Resource Type: 
Polypeptide
Name: 
XM_017402207.1
Identifier: 
XM_017402207.1-protein
Sequence: 
MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLA
LVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGL
LTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLV
ASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVS
AGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLI
TCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR
LSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLG
SLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCT
PCDPSLQEACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFST
NTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLG
IAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPIT
MLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADV
KPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHG
LVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVT
KNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQG
SGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ
Sequence Length: 
787
Sequence Checksum: 
ba06fae20145219f58c6f43f5abad616
View location in JBrowse: 
DCARv2_Chr6:19808606..19813486+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402207.1, derives from mRNA, XM_017402207.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RK16 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1332.78 bits (3448), Expect = 0.000e+0
Identity = 651/788 (82.61%), Postives = 716/788 (90.86%), Query Frame = 0
 
Query:    1 MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
            M ++    A+    Y    QA+EE+ +PE+NSLH+PLLKRN TLSS+PLA+VG+KVSHIESLDYEINENDLFK DWRSRSKVQVLQYIFLKWT+AFLVGLLTG+IATLINLA+ENIAGYKLL V  YIEKE YL GFI+    NF LTL+A+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKIVGSIGAVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR++WRWLRYFNNDRDRRD+ITCG+SSGVCAAFR+PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDVS V++ YHV+DIIP+ V+GVIGGVLGSLYN+ LHK+LR+YNLINEKGK++KLLLSLTVSLFTSACLYGLPFLA C PCD SL E ACP TGR GNFKQFNCP G+YNDLATLL TTNDDAVR+IFSTNT +EF  FSLTIFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMG YT IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLI+KTVGDCFNPSIYEIILDLKGLPFL+A+PEPWMRNITVGELADVK PVVTL G+EKVGRIVDVL+NTTHNGFP+VD+   P    A G  ELHG++LRAHLVL L+KKWFLQE+RRTEEWEVREK TSVDLAER  K+EEVAVTK+EMEMY+DLH LTN T YTV+E+MSVAKALVLFR+VGLRHMLI+P++Q +GVSPVVGILTRQDLRA NIL+AFPHLEK+KG +KG 
Sbjct:    1 MEDDLRNTAKATTTYNMEAQANEER-DPESNSLHQPLLKRNRTLSSTPLAMVGSKVSHIESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWTVAFLVGLLTGIIATLINLAVENIAGYKLLAVVGYIEKERYLMGFIFLAGVNFFLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIVGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDIITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKSGNCGLFGQGGLIMFDVSGVTVSYHVMDIIPIAVIGVIGGVLGSLYNHFLHKVLRLYNLINEKGKIYKLLLSLTVSLFTSACLYGLPFLARCRPCDSSLSESACPNTGRAGNFKQFNCPDGYYNDLATLLLTTNDDAVRNIFSTNTSSEFHVFSLTIFFVLYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYEIILDLKGLPFLEANPEPWMRNITVGELADVKAPVVTLNGVEKVGRIVDVLKNTTHNGFPIVDEGVTPPVRLATGVIELHGIILRAHLVLALQKKWFLQEKRRTEEWEVREKFTSVDLAEREGKIEEVAVTKDEMEMYIDLHSLTNRTPYTVMESMSVAKALVLFRQVGLRHMLIVPQYQAAGVSPVVGILTRQDLRAQNILTAFPHLEKSKGREKGN 787
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7C227 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1321.61 bits (3419), Expect = 0.000e+0
Identity = 648/789 (82.13%), Postives = 718/789 (91.00%), Query Frame = 0
 
Query:    1 MVEEQSQHAEPARNY-MEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
            M E+ SQ AE    + MEGQ ADEE+ +PE+NSLH+PLLKR  TLSS+PLA+VGAKVS+IESLDYEINENDLF+ DWRSRSKVQVLQYIFLKW LAFLVGLLTG+IATLINLA+ENIAGYKLL V +YIEKE YL GFIYFT ANF LT+VA+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKI+GSIGAVSAGLDLGKEGPLVHIG+C+ASLL QGGPD   ++WRWLRY NNDRDRRDLITCG+SSGVCAAFR+PVGGVLF+LEEVATWWRSALLWRTFFSTA+V VVLR  +EYC + +CGLFGQGGLI+FDVS V++RYHV+DIIPV V+G+IGGVLGSLYN+LLHK+LR+Y+LINEKG++HKLLLSLTVSLFTSACLYG PFLASC PCDPSL E ACPTTGR GNFKQFNCP+G+YNDLATLL TTNDDAVR++FS NTP EF   SL IFFALYCILGL TFGIAVPSGLFLPIILMGSAYGRMLGIAMG YT IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLI+KTVGDCFNPSIYEIIL+LKGLPFLDAHPEPWMRNITVGELAD KP +V L G+EKV RIVDVLRNTTHNGFPVVDD  VP    ++G  ELHGL+LR+HL+L+LKKKWFLQERRRTEEWEVREK T V+LAER  K+EEVAVTK+E+EMYVDLHPLTN T YTV+E+MSVAKA+VLFR+VGLRH+L++P++Q +GVSPVVGILTRQDLRAHNILSAFPHL K+KG +KG 
Sbjct:    1 MEEDSSQFAETTTTHNMEGQ-ADEEERDPESNSLHQPLLKRTRTLSSTPLAMVGAKVSYIESLDYEINENDLFRHDWRSRSKVQVLQYIFLKWALAFLVGLLTGIIATLINLAVENIAGYKLLAVVHYIEKERYLMGFIYFTGANFALTMVATVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLSQGGPD---IKWRWLRYVNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAIVAVVLRAFIEYCTSGNCGLFGQGGLIMFDVSGVTVRYHVMDIIPVAVIGIIGGVLGSLYNHLLHKVLRLYSLINEKGRIHKLLLSLTVSLFTSACLYGFPFLASCRPCDPSLTESACPTTGRTGNFKQFNCPNGYYNDLATLLLTTNDDAVRNVFSINTPAEFTLLSLIIFFALYCILGLLTFGIAVPSGLFLPIILMGSAYGRMLGIAMGPYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYEIILELKGLPFLDAHPEPWMRNITVGELADAKPALVALHGVEKVARIVDVLRNTTHNGFPVVDDGVVP----SIGATELHGLILRSHLILVLKKKWFLQERRRTEEWEVREKFTWVELAERGGKIEEVAVTKDELEMYVDLHPLTNRTPYTVMESMSVAKAMVLFRQVGLRHLLVVPQYQAAGVSPVVGILTRQDLRAHNILSAFPHLAKSKGIEKGN 781
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9UGW8 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1304.27 bits (3374), Expect = 0.000e+0
Identity = 651/787 (82.72%), Postives = 714/787 (90.72%), Query Frame = 0
 
Query:    2 VEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDP-SLQEACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
            +E+ ++  E     ++ Q  DEE+ +PE+N+LH+PLLKRN TLSSSPLA+VGAKVSHIESLDYEINENDLFKQDWRSRSK +VLQYIFLKW LAFLVGLLTG+IATLINLA+ENIAGYKLL V  YIE++ YL GFIY   ANFLLTLVA+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKI+GSIGAVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR+RWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFG+GGLI+FDVS VS+RYH  DIIPV V+GV+GGVLGSLYN+ LHK+L+VYN+INEKGKLHKLLLSL+VS+FTS C+YGLPFL  C PCD  SL+ +CPTTGR GNFKQFNCP G+YNDLATLL  TND+AVR+IFS NTPTEF  FSLTIFFALYCILGL TFGIAVPSGLFLPIILMGSAYGRMLGIAMG YTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLI+KTVGDCFNPSIY+IIL+LKGLPFLDAHPEPWMRNITVGELADVKPPVVTL GIEKV  IV+VL+NTTHNGFPVVD   +P      G  ELHGLVLRAHL+L+LKKKWFLQE+RRT+EWEVREK TS+DLAER  K+EEV VTK+EMEMYVDLHPL+NTT YTVVE+MSVAKA+VLFR+VGLRHMLILPK+Q +GV PVVGILTRQDLRAHNILSA P L+K+ GSKKG 
Sbjct:    1 MEDFNKLVEAEAANIQRQGEDEEERDPESNTLHQPLLKRNRTLSSSPLAIVGAKVSHIESLDYEINENDLFKQDWRSRSKTEVLQYIFLKWLLAFLVGLLTGLIATLINLAVENIAGYKLLAVVKYIEQKRYLMGFIYMAGANFLLTLVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKSGNCGLFGKGGLIMFDVSGVSVRYHAEDIIPVAVIGVLGGVLGSLYNHFLHKVLKVYNIINEKGKLHKLLLSLSVSIFTSICMYGLPFLVKCRPCDASSLESSCPTTGRAGNFKQFNCPKGYYNDLATLLIATNDNAVRNIFSINTPTEFHIFSLTIFFALYCILGLITFGIAVPSGLFLPIILMGSAYGRMLGIAMGPYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYDIILELKGLPFLDAHPEPWMRNITVGELADVKPPVVTLSGIEKVSHIVEVLKNTTHNGFPVVDAGVIPPMGSPNGATELHGLVLRAHLILVLKKKWFLQEKRRTQEWEVREKFTSIDLAERGGKIEEVTVTKDEMEMYVDLHPLSNTTPYTVVESMSVAKAMVLFRQVGLRHMLILPKYQAAGVYPVVGILTRQDLRAHNILSALPQLKKSNGSKKGH 787
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6NGH5 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1303.89 bits (3373), Expect = 0.000e+0
Identity = 633/770 (82.21%), Postives = 706/770 (91.69%), Query Frame = 0
 
Query:   19 QQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPS-LQEACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
            +QA++++ +PE+NSLH+PLLKRN TLSSSPLALVG KVS+IESLDYEINENDLFK DWR+RS+ QVLQY+FLKW LAFLVGLLTG+IATLINLA+ENIAGYKLL V NYIE++ Y+ GF++ T  NF+LTL+A+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATT+ VKI+GSIGAV+AGLDLGKEGPLVHIGAC+ASLLGQGGPDNYR+RW+W+RYFNNDRDRRD+ITCG+SSGVCAAFR+PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+  CGLFG+GGLI+FDVS V++ YHVVD+IPVTV+G+IGGVLGSLYNY+LHK+LR+YNLINEKGKL K+LLSL+VSLFTSACLYGLPFLASCTPC+PS +   CPTTGR+GNFK+FNCP GHYNDLATLL TTNDDAVR+IFSTNTP+E++ FSL IFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG YT IDQGL+AVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISK+VGDCFNPSIYEIILDLKGLPFL+AHPEPWMRNITVGELAD+KPPVV+L GIEKVGRIV+VLRNTTHN F VVD   VP   Q     E+HGLVLRAHL+L+LK KWFLQERRRTEEWEVREK T VD+AER   +EEVAVTK EMEMYVDLHPLTNTT YTVVETMSVAKALV FR+VGLRHML+LPK+ G  V PVVGILTRQDLRA NILSAFPHLEK+  +KKG+
Sbjct:   12 EQANQQERDPESNSLHQPLLKRNRTLSSSPLALVGTKVSYIESLDYEINENDLFKHDWRTRSQAQVLQYVFLKWLLAFLVGLLTGIIATLINLAVENIAGYKLLAVVNYIERKRYMMGFLFMTGVNFILTLIATLLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTMFVKIIGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDNYRIRWKWIRYFNNDRDRRDIITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKSGECGLFGEGGLIMFDVSGVAVNYHVVDLIPVTVIGIIGGVLGSLYNYVLHKVLRLYNLINEKGKLAKILLSLSVSLFTSACLYGLPFLASCTPCNPSAVDSECPTTGRMGNFKKFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFILYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTTIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKSVGDCFNPSIYEIILDLKGLPFLEAHPEPWMRNITVGELADIKPPVVSLSGIEKVGRIVEVLRNTTHNAFAVVDYTLVPTVGQM---SEVHGLVLRAHLLLVLKTKWFLQERRRTEEWEVREKFTWVDVAERWGTIEEVAVTKEEMEMYVDLHPLTNTTPYTVVETMSVAKALVQFRQVGLRHMLVLPKYHGPSVPPVVGILTRQDLRAGNILSAFPHLEKSHATKKGR 778
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6MDV2 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1299.26 bits (3361), Expect = 0.000e+0
Identity = 639/772 (82.77%), Postives = 703/772 (91.06%), Query Frame = 0
 
Query:   18 GQQADEEQGNPENNSLHRPLLKRNLT-LSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
             +  ++++ + E+NSLH+PLLKRNLT LSSSPLALVGAKVS+IESLDYEINENDLFK DWRSRS+ QVLQYIFLKW LAFLVGLLTG+IATLINLA+ENIAGYKLL V  YI+ + Y+ GF+Y T  NF+LTL+A+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATT+ VKIVGSIGAV+AGLDLGKEGPLVHIGAC+ASLLGQGGPD+YR++WRW+RYFNNDRDRRD+ITCG+SSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDV  V +RYHV D+IPVTV+G+IGGVLGSLYNYLLHK+LR+YNLIN KGKL K+ LSL VSLFTSACLYGLPFLASCTPCDPS+ ++ CP+TGR+GNFKQFNCP GHYNDLATLL TTNDDAVR+IFSTNTP+E++ FSL IFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG Y  IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISK+VGDCFNPSIYEIIL+LKGLPFL+AHPEPWMRNITVGELADVKPPVVTL GIE VGRIVDVLRNTTHNGF VVD     VG  +    E+HGLVLRAHL+L+LKKKWFLQERRRTEEWEVREK T VD+AER   +EEVAVTK EMEMYVDLHPLTNTT YTVVETMSVAKALV FR+VGLRHML+LPK+ G GV PVVGILTRQDLRAHNILSAFPHLEK+  SKKG+
Sbjct:    9 AETTNQQERDMESNSLHQPLLKRNLTALSSSPLALVGAKVSYIESLDYEINENDLFKHDWRSRSQAQVLQYIFLKWLLAFLVGLLTGLIATLINLAVENIAGYKLLAVVQYIDNKRYMMGFLYMTGVNFILTLIATVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTMFVKIVGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDDYRIKWRWIRYFNNDRDRRDIITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKDGACGLFGQGGLIMFDVGGVPVRYHVADLIPVTVIGIIGGVLGSLYNYLLHKVLRLYNLINAKGKLAKISLSLAVSLFTSACLYGLPFLASCTPCDPSVVDSECPSTGRMGNFKQFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFILYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYASIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKSVGDCFNPSIYEIILELKGLPFLEAHPEPWMRNITVGELADVKPPVVTLSGIETVGRIVDVLRNTTHNGFAVVDS----VGQVS----EVHGLVLRAHLLLVLKKKWFLQERRRTEEWEVREKFTWVDVAERWGTIEEVAVTKEEMEMYVDLHPLTNTTPYTVVETMSVAKALVQFRQVGLRHMLVLPKYHGHGVPPVVGILTRQDLRAHNILSAFPHLEKSHASKKGR 772
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7N4J5 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1299.26 bits (3361), Expect = 0.000e+0
Identity = 641/772 (83.03%), Postives = 702/772 (90.93%), Query Frame = 0
 
Query:   18 GQQADEEQGNPENNSLHRPLLKRNLT-LSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
             +  ++++ + E++SLH+PLLKRNLT LSSSPLALVGAKVS+IESLDYEINENDLFK DWRSRS+ QVLQYIFLKW LAFLVGLLTG+IATLINLA+ENIAGYKLL V  YI+ + Y+ GF Y T  NFLLTLVA+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATT+ VKIVGSIGAV+AGLDLGKEGPLVHIGAC+ASLLGQGGPD+YR++WRW+RYFNNDRDRRD+ITCG+SSGVCAAFR+PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDVS V +RYHV D+IPVTV+G+IGGVLGSLYNYLLHK+LR+YNLIN KGKL K+ LSL VSLFTSACLYGLPFLASCTPCDPSL ++ CP+TGR+GNFKQFNCP GHYNDLATLL TTNDDAVR+IFSTNTP+E++ FSL IFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG Y  IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISK+VGDCFNPSIYEIIL+LKGLPFL+AHPEPWMRNITVGELADVKPPVVTL GIE VGRIVDVLRNTTHNGF VVD     VG  +    E+HGLVLRAHL+L+LKKKWFLQERRRTEEWEVREK T VD+AER   +EEVAVTK EMEMYVDLHPLTNTT YTVVETMSVAKALV FR+VGLRHML+LPK+ G GV PVVGILTRQDLRAHNILSAFPHLEK+  SKKG 
Sbjct:    9 AETTNQQERDMESDSLHQPLLKRNLTALSSSPLALVGAKVSYIESLDYEINENDLFKHDWRSRSQAQVLQYIFLKWLLAFLVGLLTGLIATLINLAVENIAGYKLLAVVQYIDNKRYMMGFFYMTGVNFLLTLVATVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTMFVKIVGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDDYRIKWRWIRYFNNDRDRRDIITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKDGACGLFGQGGLIMFDVSGVPVRYHVADLIPVTVIGIIGGVLGSLYNYLLHKVLRLYNLINAKGKLAKISLSLAVSLFTSACLYGLPFLASCTPCDPSLVDSECPSTGRMGNFKQFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFILYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGPYASIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKSVGDCFNPSIYEIILELKGLPFLEAHPEPWMRNITVGELADVKPPVVTLSGIETVGRIVDVLRNTTHNGFAVVDS----VGQVS----EVHGLVLRAHLLLVLKKKWFLQERRRTEEWEVREKFTWVDVAERWGTIEEVAVTKEEMEMYVDLHPLTNTTPYTVVETMSVAKALVQFRQVGLRHMLVLPKYHGHGVPPVVGILTRQDLRAHNILSAFPHLEKSHASKKGS 772
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VG31 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1298.11 bits (3358), Expect = 0.000e+0
Identity = 635/786 (80.79%), Postives = 721/786 (91.73%), Query Frame = 0
 
Query:    2 VEEQSQHAEPA-RNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREV-PVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSK 784
            +E+ +Q A  A  N ++GQ  ++E+ +PE+NSLH+PLLKRN TLSS+PLA+VGAKVS+IESLDYEINENDLFK DWRSR++VQVLQY+FLKWTLAFLVGLLTGVIATLINLA+ENIAGYKLL V +YI  + YL GF++F   NFLLTL+A+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATTL+VKI+GSIGAV+AGLDLGK GPLVHIG+C+ASLLGQGGPDNYR++WRWLRYFNNDRDRRDLITCGSSSGVCAAFR+PVGGVLFALEEVATWWRSALLWR+FFSTAVVVVVLR  MEYCK+  CGLFG+GGLI+FDVS+VS+RYH+VD+IP+ V+G+IGG+LGSLYN++LHK+LR+Y+LINEKGKLHKLLLSL VS+FTS C+YGLPFLASC PCDPS+QE +CPT G  GNFKQFNCP+G YNDLATLL TTNDDAVR+IFST+T +EF  F+LTIFF LYCILGL TFGIAVPSGLFLPIILMG+AYGRMLG+AMG YT+IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLP+TMLVLLI+KTVGDCFNPSIYEIIL+LKGLPFLDA+PEPWMRNITVGELADVKPPVVTL GIEKVG IV+VLRNTTHNGFPVVD+  + PVG+Q  G  EL GLVLRAHL+L+LK+KWFL ERRRTEEWEVREK T VDLAER  K+++V VTK+EMEMYVDLHP+TNTT YTV+E+MS AKA+VLFR+VGLRHM+I+PK+Q SGVSPVVGILTRQDLRAHNILSAFPHL K+KG K
Sbjct:    1 MEDSNQFAAAAATNDVDGQAQNQER-DPESNSLHQPLLKRNRTLSSNPLAVVGAKVSYIESLDYEINENDLFKHDWRSRAQVQVLQYVFLKWTLAFLVGLLTGVIATLINLAVENIAGYKLLKVIDYINNKRYLMGFLFFAGTNFLLTLLAAVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIIGSIGAVAAGLDLGKXGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFALEEVATWWRSALLWRSFFSTAVVVVVLRAFMEYCKSRYCGLFGKGGLIMFDVSEVSVRYHIVDLIPIAVIGIIGGLLGSLYNHVLHKVLRLYSLINEKGKLHKLLLSLGVSIFTSVCVYGLPFLASCRPCDPSIQETSCPTNGGAGNFKQFNCPNGQYNDLATLLLTTNDDAVRNIFSTSTSSEFHIFTLTIFFVLYCILGLITFGIAVPSGLFLPIILMGAAYGRMLGVAMGPYTQIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPMTMLVLLIAKTVGDCFNPSIYEIILELKGLPFLDANPEPWMRNITVGELADVKPPVVTLHGIEKVGYIVEVLRNTTHNGFPVVDEGVMAPVGTQT-GATELVGLVLRAHLLLVLKRKWFLPERRRTEEWEVREKFTWVDLAERWGKIDDVTVTKDEMEMYVDLHPITNTTPYTVLESMSAAKAMVLFRQVGLRHMIIIPKYQASGVSPVVGILTRQDLRAHNILSAFPHLAKSKGKK 784
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068V7H3 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1297.72 bits (3357), Expect = 0.000e+0
Identity = 636/786 (80.92%), Postives = 719/786 (91.48%), Query Frame = 0
 
Query:    2 VEEQSQHAEPA-RNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREV-PVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSK 784
            +E+ +Q A  A  N ++GQ  ++E+ +PE+NSLH+PLLKRN TLSS+PLA+VGAKVS+IESLDYEINENDLFK DWRSR++VQVLQY+FLKWTLAFLVGLLTGVIATLINLA+ENIAGYKLL V +YI  + YL GF++F   NFLLTL+A+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATTL+VKI+GSIGAV+AGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR++WRWLRYFNNDRDRRDLITCGSSSGVCAAFR+PVGGVLFALEEVATWWRSALLWR+FFSTAVVVVVLR  MEYC +  CGLFG+GGLI+FDVS+VS+ YH+VD+IP+ V+G+IGG+LGSLYN++LHK+LR+Y+LINEKGKLHKLLLSL VS+FTS C+YGLPFLASC PCD S+QE +CPT G  GNFKQFNCP+G YNDLATLL TTNDDAVR+IFST T +EF  F+LTIFF LYCILGL TFGIAVPSGLFLPIILMG+AYGRMLG+AMG YTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLP+TMLVLLI+KTVGDCFNPSIYEIIL+LKGLPFLDA+PEPWMRNITVGELADVKPPVVTL GIEKVG IV+VLRNTTHNGFPVVD+  + PVG+Q  G  EL GLVLRAHL+L+LK+KWFLQERRRTEEWEVREK T VDLAER  K+++V VTK+EMEMYVDLHPLTNTT YTV+E+MS AKA+VLFR+VGLRHM+I+PK+Q SGVSPVVGILTRQDLRAHNILSAFPHL K+KG K
Sbjct:    1 MEDSNQFAAAAVTNDVDGQAQNQER-DPESNSLHQPLLKRNRTLSSNPLAVVGAKVSYIESLDYEINENDLFKHDWRSRAQVQVLQYVFLKWTLAFLVGLLTGVIATLINLAVENIAGYKLLKVIDYINNKRYLMGFLFFAGTNFLLTLLAAVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFALEEVATWWRSALLWRSFFSTAVVVVVLRAFMEYCNSRYCGLFGKGGLIMFDVSEVSVSYHIVDLIPIAVIGIIGGLLGSLYNHVLHKVLRLYSLINEKGKLHKLLLSLGVSIFTSVCIYGLPFLASCRPCDSSIQETSCPTNGGTGNFKQFNCPNGQYNDLATLLLTTNDDAVRNIFSTGTSSEFHIFTLTIFFVLYCILGLITFGIAVPSGLFLPIILMGAAYGRMLGVAMGSYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPMTMLVLLIAKTVGDCFNPSIYEIILELKGLPFLDANPEPWMRNITVGELADVKPPVVTLHGIEKVGYIVEVLRNTTHNGFPVVDEGVMAPVGTQT-GATELVGLVLRAHLLLVLKRKWFLQERRRTEEWEVREKFTWVDLAERWGKIDDVTVTKDEMEMYVDLHPLTNTTPYTVLESMSAAKAMVLFRQVGLRHMIIIPKYQASGVSPVVGILTRQDLRAHNILSAFPHLAKSKGKK 784
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A830CDF2 ((Chloride channel protein clc-a {ECO:0000313|EMBL:GFP94053.1}))

HSP 1 Score: 1288.48 bits (3333), Expect = 0.000e+0
Identity = 633/787 (80.43%), Postives = 702/787 (89.20%), Query Frame = 0
 
Query:    2 VEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPS-LQEACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
            +E+  + AE     +E +  DEE  +PE+N L++PL+KRN TLSSSPLA+VGAKVSHIESLDYEINENDLFKQDWRSRSKV+VLQY+FLKW  AFLVGLLTG+IATLINLA+ENIAGYKLL V  YIE++ Y+ G +Y +  NFLLTLVA+ LCV FAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VK++GSIGAV+AGLDLGKEGPLVHIG C+ASLLGQGGPDNYR++WRWLRYFNNDRDRRDLITCGSS+GVCAAFRSPVGGVLFA EEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDVS VS+RYHVVDIIPV V+GVIGGVLGSLYN++LHKIL+VYN+INEKGKLHK+LLSL+VS+FTS C+YGLPFLA C PCD S L  +CPTTGR GN+KQFNCP+GHYNDLATLL TTND AVR+IFS NT  EF   SL IFFA+YC+LGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMG YTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLI+KTVGDCFNPSIYEIIL+LKGLPFLDAHPEPWMRNITVGELAD K  VVTL GIEKVGRIV+VL NTTHNGFPVVD  +  V        ELHGLVLR+HL+L+LKKKWFL+E+RRTEEWEVREK +S+DLAER  K+EEV VTK+EMEM+VDLHPLTNTT YTVVE MS+AKA+VLFR+VGLRHML+LP++   G  PVVGILTRQDLRAHNILSAFP LEK+  SKKG 
Sbjct:    1 MEDLYKLAENEAANIEKRGEDEEN-DPESNELYQPLIKRNQTLSSSPLAIVGAKVSHIESLDYEINENDLFKQDWRSRSKVEVLQYVFLKWLFAFLVGLLTGLIATLINLAVENIAGYKLLAVVKYIEQKRYIMGLVYVSGVNFLLTLVATVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKVIGSIGAVAAGLDLGKEGPLVHIGTCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGSSAGVCAAFRSPVGGVLFAFEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKSGNCGLFGQGGLIMFDVSGVSIRYHVVDIIPVAVIGVIGGVLGSLYNHILHKILKVYNVINEKGKLHKILLSLSVSIFTSICMYGLPFLAKCQPCDSSLLDSSCPTTGRTGNYKQFNCPNGHYNDLATLLLTTNDGAVRNIFSINTLNEFHISSLAIFFAIYCVLGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGPYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYEIILELKGLPFLDAHPEPWMRNITVGELADAKSAVVTLSGIEKVGRIVEVLENTTHNGFPVVDLGQNEVA-------ELHGLVLRSHLILVLKKKWFLREKRRTEEWEVREKFSSIDLAERGGKIEEVTVTKDEMEMFVDLHPLTNTTPYTVVENMSLAKAMVLFRQVGLRHMLVLPRYTSVGAPPVVGILTRQDLRAHNILSAFPQLEKSTLSKKGH 779
[Close]
BLAST of XM_017402207.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A059AQZ9 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1286.17 bits (3327), Expect = 0.000e+0
Identity = 620/790 (78.48%), Postives = 713/790 (90.25%), Query Frame = 0
 
Query:    1 MVEEQSQHA--EPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 787
            M+EE       E + N M G++ +EE+   E+NSL++PLL+R+ TLSS+PLA+VGAKV+HIESLDYEINENDLFK DWRSRSKVQVLQY+FLKWTLAFLVGLLTG+IATLINLA+ENIAGYKLL V ++I++E Y  GF+ FT +NF+LTL A+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGA+TL+VKIVGSIGAVSAGLDLGKEGPLVH G C+ASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCG+SSGVCAAFR+PVGGVLF+LEEVATWWRSALLWRTFFSTA   VVLR  +EYC + +CGLFGQGGLI+FDVS+V++RYHV+DIIPVT++G+IGGVLGSLYNY+LHK+LR+Y++IN+KGK+HKLLLSLTVSLFTS CLYGLPFLA CT C+P+L ++ CP TGR GNFKQFNCP+G+YNDLATLL TTNDDAVR+IFSTNTP E+   SL IFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG YT ID+GLYAVLGAASLM+GSMRMTVSLCVIFLELTNNL+LLP+TM+VLLISKTVGD FNPSIYEIIL+LKGLPFLDA+PEPWMR++TVGELADVKPPVVTL G+EKV R+V+VL+NTTHNGFPVV+   VP         ELHGL+LRAHLV ++KKKWFLQERRRTE+WEVRE+ + +DLAER  K+EEVAVT++EMEMYVDLHP TNTT YTVVE+MSVAKA+VLFR+VGLRHMLILPK+Q +GVSPVVG+LTRQDLRA+NIL+AFPHL K+KG + G 
Sbjct:    1 MMEEDPNRVAEESSPNGMAGEEDEEERDP-ESNSLNQPLLRRHRTLSSNPLAMVGAKVAHIESLDYEINENDLFKHDWRSRSKVQVLQYVFLKWTLAFLVGLLTGIIATLINLAVENIAGYKLLAVVHFIDEERYFTGFLLFTGSNFVLTLFAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGASTLIVKIVGSIGAVSAGLDLGKEGPLVHTGCCIASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTATTAVVLRAFIEYCSSGNCGLFGQGGLIMFDVSNVTVRYHVMDIIPVTLIGIIGGVLGSLYNYVLHKVLRLYSMINQKGKIHKLLLSLTVSLFTSICLYGLPFLAKCTKCNPALTDSVCPNTGRSGNFKQFNCPNGYYNDLATLLLTTNDDAVRNIFSTNTPGEYHTTSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDEGLYAVLGAASLMSGSMRMTVSLCVIFLELTNNLILLPLTMIVLLISKTVGDSFNPSIYEIILELKGLPFLDANPEPWMRDLTVGELADVKPPVVTLCGVEKVSRVVEVLKNTTHNGFPVVEG-VVPPAGLITSTTELHGLILRAHLVQVIKKKWFLQERRRTEDWEVRERFSWIDLAEREGKIEEVAVTRDEMEMYVDLHPFTNTTPYTVVESMSVAKAMVLFRQVGLRHMLILPKYQAAGVSPVVGVLTRQDLRAYNILAAFPHLAKSKGMEGGH 788
Match NameStatsDescription
A0A2R6RK16E-Value: 0.000e+0, PID: 82.61Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A5B7C227E-Value: 0.000e+0, PID: 82.13Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A6I9UGW8E-Value: 0.000e+0, PID: 82.72Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A5N6NGH5E-Value: 0.000e+0, PID: 82.21Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A2J6MDV2E-Value: 0.000e+0, PID: 82.77Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A6S7N4J5E-Value: 0.000e+0, PID: 83.03Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A6P6VG31E-Value: 0.000e+0, PID: 80.79Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A068V7H3E-Value: 0.000e+0, PID: 80.92Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A830CDF2E-Value: 0.000e+0, PID: 80.43(Chloride channel protein clc-a {ECO:0000313|EMBL:... [more]
A0A059AQZ9E-Value: 0.000e+0, PID: 78.48Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.