XM_017403536.1

Resource Type: 
Polypeptide
Name: 
XM_017403536.1
Identifier: 
XM_017403536.1-protein
Sequence: 
MAASTAAKARMTTTAPPSLSSLKSLNPSSPFSLPFPPSPVSLRRHSLHIT
NVLSHPTSPSPIPTHTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGA
SMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGA
TNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHN
YLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMR
LNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVE
LTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGV
RFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGL
NKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLD
ELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIG
AAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVV
QWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELR
AAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH
Sequence Length: 
648
Sequence Checksum: 
d3d331cb588f00b11e3f1a0a1f3043a6
View location in JBrowse: 
DCARv2_Chr6:21387754..21389700+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017403536.1, derives from mRNA, XM_017403536.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AV77 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}) (Fragment))

HSP 1 Score: 1082.4 bits (2798), Expect = 0.000e+0
Identity = 533/650 (82.00%), Postives = 575/650 (88.46%), Query Frame = 0
 
Query:    6 AAKARMTTTAPPSLSSLKSLNPSSPFSLPFPPSPVSLRRHS-LHITNVLSHP------TSPSPIPTHTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            A  A  + + PPS    KS N  S F+LP   +   L  H  L I+NVLS P      T+  P  T  SRF P EPRKGSD+LVEALEREGV  VFAYPGGASMEIHQALTRS  I+N+LPRHEQGGVFAAEGYARA+G+PGVCIATSGPGATNLVSGLADA+LDS+PIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVL+VEDIPRIV+EAFFLASSGRPGPVLID+PKD+QQQLVVP WDQPMRL GY+SRLPK P+   LEQIVRL+ ESKKPVLYVGGGCLNSSEEL+RFVEL+GIPVASTLMGLGA+P SD+LSL+MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSIC DV+LAL GLN+I E K   +K +FS WR+EL  QKMNYPLS+KTFG+AIPPQYAIQVLDELTNG+AIISTGVGQHQMWAAQFYKYNRPRQWLTS GLGAMGFGLPAAIGAAV RPD VVVDIDGDGSFIMNVQELATIRVE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P  ESEIFP+MLKFAEAC I AARV KKG+LRAAIQ+MLD PGPYLLDV+VPHQEHVLPMIPSGGAFKDVITEGDGRS++
Sbjct:   23 ATAANPSISKPPSFYPTKSSNSYSRFTLPISFNLQKLTLHRPLQISNVLSSPKPTVTTTTTVPPETFISRFAPDEPRKGSDVLVEALEREGVATVFAYPGGASMEIHQALTRSGIIRNVLPRHEQGGVFAAEGYARASGRPGVCIATSGPGATNLVSGLADAMLDSVPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVEDIPRIVREAFFLASSGRPGPVLIDVPKDIQQQLVVPKWDQPMRLPGYLSRLPKPPNDEHLEQIVRLVSESKKPVLYVGGGCLNSSEELRRFVELSGIPVASTLMGLGAYPCSDELSLQMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICGDVRLALEGLNRIMEEKGAELKLDFSAWRQELKVQKMNYPLSYKTFGDAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQFYKYNRPRQWLTSGGLGAMGFGLPAAIGAAVARPDAVVVDIDGDGSFIMNVQELATIRVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSKESEIFPNMLKFAEACEIPAARVMKKGDLRAAIQEMLDTPGPYLLDVVVPHQEHVLPMIPSGGAFKDVITEGDGRSTY 672
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ATP8 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}) (Fragment))

HSP 1 Score: 1078.54 bits (2788), Expect = 0.000e+0
Identity = 534/655 (81.53%), Postives = 584/655 (89.16%), Query Frame = 0
 
Query:    3 ASTAAKARMTTTAPPSL-SSLKSLNPSSPFSLPFPPSPVSLRRHS-LHITNVLSHP-----TSPSPIP-THTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGS-VKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            +  AA A  T+ + PSL SS KS    S F+LP   +P     H  LHI+ VLS+P     ++ + IP +  SRF   EPRKGSD+LVEALEREGV  VFAYPGGASMEIHQALTRS+ I+N+LPRHEQGGVFAAEGYARA+G PGVCIATSGPGATNLVSGLADA+LDS+P+VAITGQVPRRMIGTDAFQETPIVEV+RSITKHNYLVL VEDIPRIV+EAFFLASSGRPGPVLID+PKD+QQQLVVPDW+QPMRL GY+SRLP+ P+  LLEQIVRLI ESKKPVLYVGGGCLNSSEEL+RFVELTGIPVASTLMGLGA+P SD+LSL+MLGMHGTVYANYAVD+SDLLLAFGVRFDDRVTGKLEAFASRAKIVH+DIDSAEIGKNK PHVS+C DVKLAL GLN+IFE  +G+ +K +FS WR+EL  QKMN+PLSFKTFG+AIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTS GLGAMGFGLPAAIGA V RPD VVVDIDGDGSFIMNVQELATIRVE LPVKIM+LNNQHLGMVVQWEDRFYK+NRAHT+LG+P  ESEIFP+MLKFAEAC I AARVTKK ++RAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRS +
Sbjct:    7 SKMAATAANTSISNPSLFSSSKSPKLHSRFNLPISYNPQKPTLHRPLHISTVLSNPKPAITSTDTVIPESFISRFASDEPRKGSDVLVEALEREGVTTVFAYPGGASMEIHQALTRSDIIRNVLPRHEQGGVFAAEGYARASGLPGVCIATSGPGATNLVSGLADAMLDSVPLVAITGQVPRRMIGTDAFQETPIVEVSRSITKHNYLVLYVEDIPRIVREAFFLASSGRPGPVLIDVPKDIQQQLVVPDWNQPMRLPGYMSRLPRPPNETLLEQIVRLISESKKPVLYVGGGCLNSSEELRRFVELTGIPVASTLMGLGAYPCSDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHVDIDSAEIGKNKQPHVSVCGDVKLALEGLNRIFEEGKGANLKLDFSAWRQELKEQKMNHPLSFKTFGDAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSGGLGAMGFGLPAAIGAVVARPDAVVVDIDGDGSFIMNVQELATIRVENLPVKIMILNNQHLGMVVQWEDRFYKANRAHTYLGNPSKESEIFPNMLKFAEACEIPAARVTKKEDVRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSVY 661
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7FJD2 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1072 bits (2771), Expect = 0.000e+0
Identity = 526/659 (79.82%), Postives = 572/659 (86.80%), Query Frame = 0
 
Query:    1 MAASTAAKARMTTTAPPSLSSLKSLNPSSPFSL---PFPPSPVSL-----RRHSLHITNVLSHPTSPSPIP---THTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            MAA+ +     + T PPS S   ++ P S FS    P   SP+ L      R    + NV+   T+ + +    T  SRF P EPRKG D+LVEALEREGV  VFAYPGGASMEIHQALTRSN I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA SGRPGPVLID+PKD+QQQLV+P+WDQPMRL GY+SRLPK P+  LLEQIVRLI ESKKPVLYVGGGC  SSEEL+RFVELTGIPVASTLMGLGAFP  D+LSL+MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN I E KEG +K +FS WR+EL  QKM YPL+FKTFG+AIPPQYAIQVLDELTNG+AIISTGVGQHQMWAAQ+YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRP  +VVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LGDP NE EIFP+MLKFAEAC + AARV+ + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR S+
Sbjct:    1 MAAAASPSPCFSKTLPPSSSKSSTILPRSTFSFHNHPQKASPLHLIHAQHNRRGFAVANVVISTTTHNDVSEPETFVSRFAPDEPRKGCDVLVEALEREGVTDVFAYPGGASMEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLAKSGRPGPVLIDVPKDIQQQLVIPNWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPTGDELSLQMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSILEGKEGKMKLDFSAWRQELTEQKMKYPLNFKTFGDAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQYYKYKKPRQWLTSGGLGAMGFGLPAAIGAAVGRPGEIVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSNEEEIFPNMLKFAEACGVPAARVSHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRCSY 659
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7FZG4 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1070.46 bits (2767), Expect = 0.000e+0
Identity = 524/655 (80.00%), Postives = 583/655 (89.01%), Query Frame = 0
 
Query:    3 ASTAAKARMTTTAPPSLSSLKSLNPSSPFSLPFPPSPVS---LRRHSLHITNVLSHP------TSPSPIPTHTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            A+TA    ++   PPS  S KS    S F+ P P +P +   LRR +LHI+NVLS+P      T+P+   T  SRF   EPRKGSD+LVEALEREGV  VFAYPGGASMEIHQALTRS  I+N+LPRHEQGG+FAAEGYARA+G PGVCIATSGPGATNLVSGLADA+LDS+P+VAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVL+V+DIPR+V+EAFFLASSGRPGPVLID+PKD+QQQLVVP+W+QP+RL GY+SRLPK P    L+QIVRLI ESKKPVLYVGGGCLNSSEEL+RFVELTGIPVASTLMGLG++P SD+LSL+MLGMHGTVYAN+AVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVS+C DVKLAL GLN+I E+K  ++K +FS WR+EL  QK+ +PL+FKTFG+AIPPQYAIQVLDELTNG AIISTGVGQHQMWAAQFYKY+RPRQWLTS GLGAMGFGLPAAIGAAV RPD VVVDIDGDGSF+MNVQELATIRVE LPVKI+LLNNQHLGMVVQWEDRFYK+NRAHT+LG+P  ESEIFP+MLKFAEAC+I AARVTKK ++RAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRS++
Sbjct:    2 AATAGNPGISIRPPPS--STKSHQLLSRFTFPIPSNPQNPTLLRRRALHISNVLSNPKPTTLATTPAAAETFVSRFAADEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQALTRSQIIRNVLPRHEQGGIFAAEGYARASGLPGVCIATSGPGATNLVSGLADAMLDSVPVVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRVVREAFFLASSGRPGPVLIDVPKDIQQQLVVPNWNQPLRLPGYLSRLPKPPQDTHLDQIVRLISESKKPVLYVGGGCLNSSEELRRFVELTGIPVASTLMGLGSYPCSDELSLQMLGMHGTVYANFAVDGSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCGDVKLALKGLNEILEAKRANLKMDFSAWRQELKEQKVQHPLTFKTFGDAIPPQYAIQVLDELTNGKAIISTGVGQHQMWAAQFYKYDRPRQWLTSGGLGAMGFGLPAAIGAAVARPDAVVVDIDGDGSFMMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSKESEIFPNMLKFAEACDIPAARVTKKEDVRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSTY 654
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: C0L093 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1069.3 bits (2764), Expect = 0.000e+0
Identity = 519/624 (83.17%), Postives = 561/624 (89.90%), Query Frame = 0
 
Query:   28 SSPFSLPFPPSPVSLRRHSLHITNVLSHPTSPSPI---PTHTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            ++P  L   P+ +  +R    I+NV+S     S      T  SRF P EPRKGSD+LVEALEREGV  VFAYPGGASMEIHQALTRS+ I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDS+PIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA SGRPGPVLID+PKD+QQQLV+PDWDQPMRL GY+SRLPK P+  LLEQIVRLI ESKKPVLYVGGGC  SSEEL+RFVELTGIPVASTLMGLGAFP  D+LSL MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN I ESKEG +K +FS WR+EL  QK+ YPL+FKTFG+AIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQ+YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRPD VVVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P NE+EIFP+MLKFAEAC + AARVT + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSS+
Sbjct:   41 TTPPPLHLTPTHIHSQRRRFTISNVISTTQKVSETQKAETFVSRFAPDEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQALTRSSIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSVPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLARSGRPGPVLIDVPKDIQQQLVIPDWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPTGDELSLSMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSILESKEGKLKLDFSAWRQELTVQKVKYPLNFKTFGDAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQYYKYRKPRQWLTSGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: P09114 (Acetolactate synthase 2, chloroplastic (2.2.1.6) (ALS II) (Acetohydroxy-acid synthase II) (Acetolactate synthase II) (Precursor))

HSP 1 Score: 1069.3 bits (2764), Expect = 0.000e+0
Identity = 519/624 (83.17%), Postives = 561/624 (89.90%), Query Frame = 0
 
Query:   28 SSPFSLPFPPSPVSLRRHSLHITNVLSHPTSPSPI---PTHTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            ++P  L   P+ +  +R    I+NV+S     S      T  SRF P EPRKGSD+LVEALEREGV  VFAYPGGASMEIHQALTRS+ I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDS+PIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA SGRPGPVLID+PKD+QQQLV+PDWDQPMRL GY+SRLPK P+  LLEQIVRLI ESKKPVLYVGGGC  SSEEL+RFVELTGIPVASTLMGLGAFP  D+LSL MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN I ESKEG +K +FS WR+EL  QK+ YPL+FKTFG+AIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQ+YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRPD VVVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P NE+EIFP+MLKFAEAC + AARVT + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSS+
Sbjct:   41 TTPPPLHLTPTHIHSQRRRFTISNVISTTQKVSETQKAETFVSRFAPDEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQALTRSSIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSVPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLARSGRPGPVLIDVPKDIQQQLVIPDWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPTGDELSLSMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSILESKEGKLKLDFSAWRQELTVQKVKYPLNFKTFGDAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQYYKYRKPRQWLTSGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2B2Y1 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1067.37 bits (2759), Expect = 0.000e+0
Identity = 525/657 (79.91%), Postives = 571/657 (86.91%), Query Frame = 0
 
Query:    2 AASTAAKARMTTTAPPSLSSLKSLNPSSPFSL---PFPPSPVSLRRHSLH----ITNVLSHPT---SPSPIPTHTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            AAS +     + T PPS S   +L P S F+    P   SP+ L     H    ++NV+   T   + S   T  SRF P EPRKG D+LVEALEREGV  VFAYPGGASMEIHQALTRSN I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA+SGRPGPVLID+PKD+QQQLV+P+WDQPMRL GY+SRLPK P+  LLEQIVRLI ES KPVLYVGGGC  SSEEL+RFVELTGIPVASTLMGLGAFP  D+LSL+MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN I ESK+G +K +FS WR+EL  QK+ YPL+FKTFGEAIPPQYAIQVLDELTNG+AIISTGVGQHQMWAAQ YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRP  +VVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P NE EIFP+MLKFAEAC + AARV+ + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR S+
Sbjct:    3 AASASPSPCFSKTLPPSSSKSSTLLPKSTFTFHNHPKKASPLHLTHTQHHSRFTVSNVILSTTIHDNVSETETFVSRFAPDEPRKGCDVLVEALEREGVKDVFAYPGGASMEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLANSGRPGPVLIDVPKDIQQQLVIPNWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESNKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPSGDELSLQMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSILESKKGKLKLDFSAWRQELTEQKVKYPLNFKTFGEAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQHYKYKKPRQWLTSGGLGAMGFGLPAAIGAAVGRPGEIVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPANEEEIFPNMLKFAEACGVPAARVSHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRRSY 659
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0V0IYE7 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1067.37 bits (2759), Expect = 0.000e+0
Identity = 525/659 (79.67%), Postives = 572/659 (86.80%), Query Frame = 0
 
Query:    1 MAASTAAKARMTTTAPPSLSSLKSLNPSSPFSL---PFPPSPVSL-----RRHSLHITNVLSHPTSPSPIP---THTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            MAA+ +     + T PPS S   ++ P S F     P   SP+ L      R    ++NV+   T+ + +    T  SRF P EPRKG D+LVEALEREGV  VFAYPGGASMEIHQALTRSN I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA SGRPGPVLID+PKD+QQQLV+P+WDQPMRL GY+SRLPK P+  LLEQIVRLI ESKKPVLYVGGGC  SSEEL+RFVELTGIPVASTLMGLGAFP  D+LSL+MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN I E KEG +K +FS WR+EL  QK+ YPLSFKTFGEAIPPQYAIQVLDELTNG+AIISTGVGQHQMWAAQ+YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRP  +VVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P NE EIFP+MLKFAEAC + AARV+ + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR S+
Sbjct:    1 MAAAASPSPCFSKTLPPSSSKSSTILPRSTFPFHNHPQKASPLHLIHTQHHRRGFAVSNVVISTTTHNDVSEPETFVSRFAPDEPRKGCDVLVEALEREGVTDVFAYPGGASMEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLAKSGRPGPVLIDVPKDIQQQLVIPNWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPTGDELSLQMLGMHGTVYANYAVDGSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSILEGKEGKLKLDFSAWRQELTEQKVKYPLSFKTFGEAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQYYKYKKPRQWLTSGGLGAMGFGLPAAIGAAVGRPGEIVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPANEEEIFPNMLKFAEACGVPAARVSHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRRSY 659
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7HE60 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1066.99 bits (2758), Expect = 0.000e+0
Identity = 525/658 (79.79%), Postives = 573/658 (87.08%), Query Frame = 0
 
Query:    1 MAASTAAKARMTTTAPPSLSSLKSLNPSSPFSL---PFPPSPVSLRRHSLH----ITNVLSHPTSPSPIP---THTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            MAA++ +    + T PPS S   +L P S F+    P   SP+ L     H    ++NV+   T+   +       SRF P EPRKG D+LVEALEREGV  VFAYPGGASMEIHQALTRSN I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA SGRPGPVLID+PKD+QQQLV+P+WDQPMRL GY+SRLPK P+  LLEQIVRLI ESKKPVLYVGGGC  SSEEL+RFVELTGIPVASTLMGLGAFP  D+LSL+MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN IFESK+G +K +FS WR+EL  QK+ YPL+FKTFGEAIPPQYAIQVLDELTNG+AIISTGVGQHQMWAAQ YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRP  +VVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P NE EIFP+MLKFAEAC + AARV+ + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR S+
Sbjct:    1 MAAASPSPC-FSKTLPPSSSKSSTLLPKSTFTFHNHPKKASPLHLTHTQHHSRFTVSNVILSTTTHDDVSEPEIFVSRFAPDEPRKGCDVLVEALEREGVKDVFAYPGGASMEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLAKSGRPGPVLIDVPKDIQQQLVIPNWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPSGDELSLQMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSIFESKKGKLKLDFSAWRQELTEQKVKYPLNFKTFGEAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQHYKYKKPRQWLTSGGLGAMGFGLPAAIGAAVGRPGEIVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPANEEEIFPNMLKFAEACGVPAARVSHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRRSY 657
[Close]
BLAST of XM_017403536.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4APB5 (Acetolactate synthase {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591} (2.2.1.6 {ECO:0000256|ARBA:ARBA00013145, ECO:0000256|RuleBase:RU003591}))

HSP 1 Score: 1066.22 bits (2756), Expect = 0.000e+0
Identity = 509/585 (87.01%), Postives = 545/585 (93.16%), Query Frame = 0
 
Query:   64 THTSRFPPSEPRKGSDILVEALEREGVNHVFAYPGGASMEIHQALTRSNAIKNILPRHEQGGVFAAEGYARATGKPGVCIATSGPGATNLVSGLADALLDSIPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLNVEDIPRIVKEAFFLASSGRPGPVLIDIPKDVQQQLVVPDWDQPMRLNGYVSRLPKTPDFGLLEQIVRLIGESKKPVLYVGGGCLNSSEELKRFVELTGIPVASTLMGLGAFPGSDDLSLRMLGMHGTVYANYAVDQSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKLALNGLNKIFESKEGSVKGEFSQWREELAAQKMNYPLSFKTFGEAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQFYKYNRPRQWLTSSGLGAMGFGLPAAIGAAVGRPDCVVVDIDGDGSFIMNVQELATIRVEQLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTFLGDPENESEIFPDMLKFAEACNIEAARVTKKGELRAAIQKMLDYPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSH 648
            T  SRF P EPRKGSD+LVEALEREGV  VFAYPGGASMEIHQALTRS+ I+N+LPRHEQGGVFAAEGYARATG PGVCIATSGPGATNLVSGLADALLDS+PIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLV++VEDIPR+V+EAFFLA SGRPGPVLID+PKD+QQQLV+PDWDQPMRL GY+SRLPK P+  LLEQIVRLI ESKKPVLYVGGGC  SSE+L+RFVELTGIPVASTLMGLGAFP  D+LSL MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSICAD+KLAL GLN I ESKEG +K +FS WR+EL  QK+ YPL+FKTFG+AIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQ+YKY +PRQWLTS GLGAMGFGLPAAIGAAVGRPD VVVDIDGDGSFIMNVQELATI+VE LPVKIMLLNNQHLGMVVQWEDRFYK+NRAHT+LG+P NE+EIFP+MLKFAEAC + AARVT + +LRAAIQKMLD PGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSS+
Sbjct:   36 TFVSRFAPDEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQALTRSSIIRNVLPRHEQGGVFAAEGYARATGFPGVCIATSGPGATNLVSGLADALLDSVPIVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRVVREAFFLARSGRPGPVLIDVPKDIQQQLVIPDWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEDLRRFVELTGIPVASTLMGLGAFPTGDELSLSMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGLNSILESKEGKLKLDFSAWRQELTVQKVKYPLNFKTFGDAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQYYKYRKPRQWLTSGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 620
Match NameStatsDescription
A0A5B7AV77E-Value: 0.000e+0, PID: 82.00Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
A0A5B7ATP8E-Value: 0.000e+0, PID: 81.53Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
A0A3Q7FJD2E-Value: 0.000e+0, PID: 79.82Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
A0A7J7FZG4E-Value: 0.000e+0, PID: 80.00Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
C0L093E-Value: 0.000e+0, PID: 83.17Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
P09114E-Value: 0.000e+0, PID: 83.17Acetolactate synthase 2, chloroplastic (2.2.1.6) (... [more]
A0A6N2B2Y1E-Value: 0.000e+0, PID: 79.91Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
A0A0V0IYE7E-Value: 0.000e+0, PID: 79.67Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
A0A3Q7HE60E-Value: 0.000e+0, PID: 79.79Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
A0A1S4APB5E-Value: 0.000e+0, PID: 87.01Acetolactate synthase {ECO:0000256|ARBA:ARBA000131... [more]
back to top
Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.