MERFSIREYTCQMRSVDVMKCWPFGPTNIEYVQAFLPAITVKKFKWWTDE
LENELTEDLTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSRMRAKSRM
PKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNEK
RNRKMKSRDLTLVNVSMNSKKRKSGMKKGREADTIDISIDRKDKLLAPKQ
KRTFNPTENVTASPHILEYAKKLGDAAGKRTKAFGASKLTLGKKKSVFSF
HCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILE
RRMKSAPHDAVSSETNLLAEERDKFCPLNVDKSKGNSSINREENNEFFSV
TEKSTPDTCLCVEKFCFSRPRDSQENLVDRPVASNKFAYYSDHGYEVASP
DSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRR
DGACFKDCVTSFPQASSSSYVSKENWNACGGQISPHSASEKYPGQILRYH
PIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQL
ASGKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQLSFINHDERLPSEK
LCHVLSSHGQFKEKPNSMESSSLGTTSGTDASLEFRSCDPIYPYKSGINL
MSLPSQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIG
KNYRNSHEGQKVWMDNQIMVHHDGNAISYESSRHFQQDLMMQRGIEKNKR
IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVP
VPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQPVRASSSYNAY
QSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSIT
SSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVP
YIHNPLTIQSPLQNGPNLASIARPPIRPRFLPTSTMNEKREYRLKFKERI
KARLCVKDPQSKRTKKKPGSKPVKLTTPGDMSSGVTVSKLVGDAEIGALE
RKETTVLDRSGDVAKTIISASKPGNPLEGPLKLTAGAKHIFNPSGECMYS
SDSKLTHSKVPFTTQSDSAIPLESHPSKIYRF
| Relationships |
|---|
| The polypeptide, XM_017403129.1, derives from mRNA, XM_017403129.1. |

Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
Match: A0A5B7ALN7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA55983.1}))
HSP 1 Score: 546.584 bits (1407), Expect = 8.392e-172
Identity = 444/1269 (34.99%), Postives = 624/1269 (49.17%), Query Frame = 0
Query: 4 FSIREYTCQMRSVDVMKCWPFG-PTNIEYVQAFLPAITVKKFKWWTDEL---------------------------------------ENELTEDLTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSRMR--AKSRMPKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNEKRNRKMKSRD------LTLVNVSMNSKKRKSGMKKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTASPHILEYAKKLGD------------------AAGKRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMKSAP-------HDAVSSETNLLAEERDK---------FCPLNVDKSKGNSSINREENNEFFSVTEKSTPDTCLCVEKFCFSRPRDS-QENLVDRPVASNKFAYYSDH------GYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFK-DCVTSFPQASSSSYVSKENWNACGGQISP-HSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQL-ASGKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQLSFINHDERLPSEKLCHVLSSHGQFKEKPNSMESSSLGTT----SGTDASLEFRSC----DPIYPYKSGINLMSLP-SQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRNSHE--GQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKNKR-IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQ-PVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARP---PIRPRFLPTSTMNEKREYRLKFKERIKARLCVKDPQSKRTKKKPGSK---PVK------LTTPGDMSSGVTVSKLVGDAEIGALERKETTVLDRSGD------------------VAKTIISASKPGNPLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPF--TTQSDSAIPLESHPSKIYRF 1132
FSIREY +MRSVDV+KCWP G IE V+A LP ITVKKF+ W+DEL +NE E L CPVC +F+A + +N HV+ C+ E +M+ AKSR PKKRSIVE+FAVAPQV++V + D+D + KLSA+ N K+ +K K + +++ KK+K K EA +D+S+ K P + + +P N T P+ Y+K L + A K+ SKL +K VF ILK +KV+ G+ STI +++AN C S+RHVR SGKDDIL R K P + +S +N++A K + V G++SI+ E E + EK DTC V+ F RPR S QEN DR + N+ A +S++ GY AS D S A P SM+K + P++ T+ N+S + + KVI H+ D R + +FP SSS + N NA G P + E Y G L+ LSPKELM S+CS + ++R+ + + +NGD+ GLPLNS GE I +SGKG F+Q +R + T SSR+L N G +D R P + + H +E N SS LG T SG S ++P +S ++LM++ ++ + DQ Q ++ +R ++P+ +P+ + + TQPTMRLMG+EF++G++ ++ +KVW D QI+ H S ++S R QQDL++ K +A SSEIQI+ S S+ + P+ RF P + CQTN V N R G P +++P+ PP SPA FN + QE F+ +SL +N Q P+ S+ +N QS+SSN AE P++T SAF+FPF D GEH QP QSSSKS+ LLNA Q E IGS Q YS+ SH +S NF+ FVR T NPL+ SPLQN A++A P PIRP +PTS + R R+K K+R+K ++C Q +TKK+P +K P K L TP SS VT K G+ K L+ +GD V+ + S GP+KL+AGAKHI P + M ++++ THS +PF T S + E +KIYRF
Sbjct: 13 FSIREYASKMRSVDVVKCWPLGGEMKIEVVEALLPPITVKKFRLWSDELGLVRSKCVEEEKSKIHEEVSGNGSNLVLETEKWDVVLGSDNEKLE-LICPVCRLFRAATVNAVNAHVNSCLTHASREERRQMKTKAKSRTPKKRSIVEIFAVAPQVERVDD---------DDEDSYTKLSALTDFGLNSKKKKKKKETKLMKEEAVVIMSKLKKQKKKKKIKVKKNEAINVDLSVRSIAKKEKPHKLKLQSPV-NFTGKPNGSSYSKGLTNDISDAVSIRKKKSRLQCSATQKKNTVVQTSKLITKHQKPVFPVRGILKNRTKVILGQN-STICNLQAASQANQCGVQPSDRHVRFSGKDDILGPRRKPFPSVESPKSQNICNSYSNVIAASLVKDHAVKMGKDLATVEVSGGMGDASISTENETEVQPIMEKQLSDTCHRVDIPNFLRPRISCQENFSDRSITVNQVAMHSENLHSFEQGYRAASHDPSYAFNPRFLSMQKEGFNPNVNTQVGGNISNASNTSLKVIDHFGDPTARVATVSSVGYMEAFPHPSSSFF--PLNGNANGRLPFPLQTTQENYNGHTLQKQSFCRLSPKELMGSICSFPDWKRRAVICEEKCKNGDFFGLPLNSQGELIHWNSSGKGEFSQLMRESTITGSSRSLTEYNNVLPNSTGVYC---NDWRAPPKDQLTLFPVHSCVEENHNLPVSSRLGITELQCSGRTDVQRLDSVRGNTHSVHPLESDLDLMNISHNRCKQFDQVQYHTGNRKIHPQGNPDHVTLHFTQPTMRLMGKEFTVGRSSKDLQGIVDEKVWTDKQIIAEHLPGYTSADNSSVKRQLQQDLIVHPVSSNVKETVACSSEIQINQASNSLLLMKTPELRFPHPYLNCQTNIVCRNGSRTINGNPNSKSHPHSPPAVSPAFFNGSTIFQEPFIRGFDSLKVNSQVPMPMSTPHNTCQSMSSNSAELKYKQKLPYATKSAFEFPFSRPDCGEHVQPPWFQSSSKSLPPWLLNATQQKEKFIGSCQSYSDVGSSHRPCTMSGANFRTVPFVRSTP-----CNPLSFYSPLQNSLGPAALAHPPLLPIRPGCIPTSVKYKSRGERMKVKDRMKLKVCADHGQ--KTKKRPAAKSNDPTKRTKIPNLETPEGYSS-VTALKTSGNFGGDIQFSKGALGLNSNGDKASSEGCWQNETQKDGLRVSPGVDSFKLDDMARSGPIKLSAGAKHILKPC-QNMDQNNARSTHSTIPFAAATSSGRVVQSEKKSAKIYRF 1255
Match: A0A5J5A8L7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526222.1}))
HSP 1 Score: 437.187 bits (1123), Expect = 1.622e-131
Identity = 379/1144 (33.13%), Postives = 549/1144 (47.99%), Query Frame = 0
Query: 1 MERFSIREYTCQMRSVDVMKCWPFG----PTNIEYVQAFLPAITVKKFKWWTDELENELTE--------------------------------------------DLTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSRMRA--KSRMPKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNEKRNRKM-------KSRDLTLVNVSMNSKKRKSGMKKGREADTIDIS---IDRKDKLLAPKQKRTFNPTENVTASPHILEYAKKLGDA--------------AGKRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMK---------------SAPHDAVSSETNLLAEERDK-FCPLNVDKSKGNSSINREENNEFFSVTEKSTPDTCLCVEKFCFSRPRDS-QENLVDRPVASNKFAYYSD------HGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFPQASSSSYVSKENWNACGGQISP-HSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQL-ASGKGGFNQTIRPAIFTDSSRTLA--FCTEPPSNQDGQLSFINHDERLPSEKLCHVLSSHGQFKEKPN-----SMESSSLGTTSGTDASL--EFRSCD-PIYPYKSGINLMSLPSQSNRT-DQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRNSH--EGQKVWMDNQIMVHH--DGNAISYESS---RHFQQDLMMQRGIEKNKRIAS-SSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQ-PVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARP---PIRPRFLPTSTMNEKREYRLKFKERIKARLCVKDP-QSKRTKKKPGSK 1021
E FSIREY + R+VDV+K WPFG N E V+A LP ITVKKF+WW++EL+ L+ DL CPVC VF A + +N HV+ C+ E +MR KSRMPKKRSIVE+FAVAPQV++ D+DED +D+ + K+S N KR +K ++ + N K + K EA+ +D+S I +K+K K + T N T + SP+ A ++ +A A K+ K SKL KKSVF ILK H+KV+SG+ STI +++AN C S+RHVR SGKDDIL R K S +S A +R K +++++S + SI +E E +TEK D V+ F RP S +E+ ++ V N+ A +S+ G+ A D S P SM+K Y ++ T+ S + KVI H+ D + + FPQ SSS Y N NA G P + Y G +Y P+ H+SPKELM S+ S + +QR+ + + D+ GLPLNS GE IQ +SGKGG Q +R A T SSR+LA P S ++ D R+ + L KE N + + L T TD R + +P +S ++LM++ + +Q QN + + ++ + +P+ + + PTMRLMG+EF++ ++ ++ E +KVW D QI+ H A + E+S R F QDL++ ++ K A+ SSEIQI+ S SV Q+ PPD RFS P + QT+ VY+NA R P +++P+ PP PA FN+ QE +C +ES +N Q P++AS+ +N YQ + G++ QP QSSSKS+ LLNA Q E IGS Q YS+ HH IS +NF+ + T +V Y+ +PL+ S LQN A++A P PI P +P +++ + R+K K ++K R+C KDP K+TKK+P +K
Sbjct: 5 FEGFSIREYASKRRTVDVVKSWPFGGDSNEINKEDVEAVLPPITVKKFRWWSNELQLVLSNCVDEGKSKIPEESSEVVGSESGFVSDSVEAGKSEVVLGLDNDKLDLICPVCRVFTAATLNSVNAHVNSCLAHASRDERRQMRTRIKSRMPKKRSIVEIFAVAPQVERFDVDDDEDSSQ-ADELQYDKVSTSTDVGLNNKRKKKKKKTKLKEEAAVIISKLKKQNKKIKFKKKAKKNEANNVDLSVRSIVKKEKPHKLKLQSTVNFTGKQSGSPYSKGLASEILNAVSVHKKKPRLKCSAAQKKNKIGQPSKLIAKHKKSVFPVRGILKNHTKVISGQN-STICNLQGASQANQC-VQPSDRHVRFSGKDDILGPRRKPFSSAEGCKLQNICNSHSRAIAASLIKEHAVKRGKDIATVDLNRSDEDISIGKENETEVQPITEKQLSDIHPRVDTSNFLRPDTSCKEHFSEKSVTVNQVALHSEKLHSFEQGHRAALHDPSYVFNPRFLSMQKEGYSSNVNTQVGGRAS---NTSLKVIDHFGDTAGVATLTSMEYMKEFPQPSSSFYAL--NGNANGRLPFPLQTTRGNYNGHASQYQPVCHMSPKELMGSIGSFPDWKQRAVTCEEKCTDEDFFGLPLNSQGELIQWNSSGKGGIEQLMR-ASTTGSSRSLAKDINVLPNSTRN-----YYSDGRVAPKDQLKFLPVQSCVKENHNLPISSRLHITDLQCTGRTDVQWLDSVREANHSFHPVESDLDLMNVSHNGRKQYNQVQNKNGNGKIHLQGNPD----HASLPTMRLMGKEFTVVRSSKDLQGIEDEKVWKDKQIIAEHRPAATATATENSVVKRQFLQDLIVHPVSDRVKETAACSSEIQINQASNSVLQMKPPDFRFSHPYVNYQTDIVYQNASRTINRNPNSRSHPFSPPAVPPAFFNRSHILQEPLICGYESQKVNSQIPMQASTIHNTYQ------------------------------NFGDYVQPPWLQSSSKSLPPWLLNATQQKEMLIGSSQLYSDVGGGHHPCTISGSNFRTVPSLHSTAEVSYLCSPLSSHSLLQNSFGPAALAHPPLMPIPPGCIPNASIYKSYGQRMKGKGKMKLRVCAKDPDHGKKTKKRPAAK 1100
Match: A0A2R6QZ26 ((Inter-alpha-trypsin inhibitor heavy chain like {ECO:0000313|EMBL:PSS17648.1}))
HSP 1 Score: 365.155 bits (936), Expect = 1.878e-105
Identity = 371/1205 (30.79%), Postives = 542/1205 (44.98%), Query Frame = 0
Query: 13 MRSVDVMKCWPFGPTNIEYVQAFLPAITVKKFKWWTDELENELTEDLTCPVCFVFKALSTQELNGHVSRCIV--QLGNTENSRMRAKSRMPKKRSIVELFAVAPQVDKVYEDED---------EDGDDLSDQDDHVKLSAMIRTRFNEKRNRKMKSRDLTLVNVSMNSKKRKSGMKKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTASPHILEYAKKLGDAAGKRTKAFGASKLTLGKK-------------KSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMKSAPHDA---------VSSETNLLAEERDKFCPLNVDKSKGNSSINREENNEFFSVTEKSTPDTCLCVEKFCFSRPRD-SQENLVDRPVASNKFAYYSD------HGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFPQASSSSYVSKENWNACGGQISPHSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQLAS-GKGGFNQTIRP-AIFTDSSRTLAFCTEPPSNQDGQLSFINHD--ERLPSEKLCHVLSSHGQFKEKPNSMESSSLGT-----TSGTDASLEFRSCD---PIYPYKSGINLMSLPSQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRN--SHEGQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKN--KRIASSSEIQIDM-LSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYL--PPDYSPAIFNKGSSSQETFVCEHESL-PLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRP---RFLPTSTMNEKREYRLKFKERIKARLCVKDP-QSKRTKKKPGS------KPVK---LTTPGDMSSGVTVSKLVGDAEIGALERKETTVLDRSGDVAKTIISASKPGNPLE-------GPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPFTTQSDSAIPLESHP--SKIYRF 1132
MR VDV K WPF + + ++ LP ITVKKF+WW+DELE + +C E+N +S ++ +L + +++ SR PKKRSIVE+FAVAPQV++ EDE+ + L+ D L + + + +K K +D T+ + +KR S +KK ++ +K+K PK +R F T + +S K + +A R K A L KK K+VF ILK H K S + ST++ +N N +RHVR S +D+ILE S H+ VSS + E V+ S + S+ E E +EK + DTC ++ F RP QE L DRPV N+ +S+ G+ AS P S+ K Y P + + ++S +SH D ++ S+ Y S N N G P + + ++Y P+ H SPKELM S+CS + QR+ + GR + + GLPLNS GE IQL+S GKG NQ RP +I T SSR A ++ F + + P++ + KE PN S+ G T TD + + +Y +S + LM++ + Y+N +N E G G PTMRLMG+EF++ ++ + S E KVW D QI+ H + +SS R FQQD +++ +K + IA SE QI+ L + PP S F P + C+ +A Y N G P+ PYL SP + Q+ FV +ESL P + P ASS + SSN E M PH+T SAF+FPFL D GEH QP QSSSKS+ LL A Q E+ + Q YS+ HH + ++ Y +NP S +QN AS RPP+ P F+PTS++N+ R+KF+ER R+ K+ Q K+T+K+P + KP+K LT D +S + E+ ++ KE++V R ++ + S + L GP++L+AGAKHI PS +S+ THS +PF S ES ++IYRF
Sbjct: 1 MRDVDVAKSWPFSAASDDEIRTSLPPITVKKFRWWSDELELLGRSEERSKICDQNIEQEEIEVNLELSETVLGDKLVQSREIKVKKSSRTPKKRSIVEIFAVAPQVERADEDEEEGSSEENEAHNSKVLALADVVCDLESKEKMKKMMNTKKKPKLKDETMRK--LKKQKRMSKVKK---------NVQKKEKPHNPKLQRRFILTSKLNSSLCSEGLGKDILNATSIRKKKTTAKCLATKKKNKLVQTSKLIKHKKAVFPVRGILKNHKKGFS-LEHSTVSNSQIANLVNQFVVQQPDRHVRFSDEDEILEH---SKLHNVCSLTSSAIPVSSGKDYALERGKDLATPEVNGSDEDVSMRTEREIEVRPASEKQSSDTCF-LDIPNFLRPHVVGQEQLSDRPVTVNQVGLHSENLQTFKQGFRDASHGPLFDHTPNFISLLKEGYNPGLNAQVGPDISR--------VSHPSD--------------RLIESQSNPYFSM-NENVNGKFSCPSQNTVNFGSHSVQYQPLVHFSPKELMRSICSFPDWNQRAVIGEGRRMDEGFCGLPLNSQGELIQLSSSGKGALNQLTRPTSILTGSSRNSAVHNTLKNSTVDLSKFKDKNCYGGAPAKDQLNTFPDWNCAKEFPNLPVCSTSGISRIQGTGRTDVHCLYSVGENNRSVYRLESDLELMNISHHGQK-----QYNNVQNQIRE-------GKGP-PTMRLMGKEFTVSRSSNDLLSFEDGKVWTDKQIIAEHRPANAAIDSSSLERRFQQDFIVRPDSDKQAFEDIACLSETQINQSLQGRPLLVKPPGSGFPHPHLNCKPDAGYRNLYPVTNGNRFPKLRPYLHSAAAASPPFSTQTPLFQDEFVFGYESLKPTSQIPKFASSPRG---NTSSNPVELQNMQKLPHATKSAFEFPFLRPDCGEHVQPSWFQSSSKSLPPWLLTATQQKETPLRLSQSYSDVAGRHHPRPM-------YHPLQHPPQASYPYNPAYFHSTVQNSLGPASFPRPPLMPLCREFIPTSSINKLHGERMKFRERPAPRVISKESDQGKKTRKRPAAKSSGSQKPIKMPNLTVQEDSNSEPSPRANGSALELESIRDKESSVECRQTEIQTHGMRVSPVIDTLNVDEIARSGPIRLSAGAKHIIKPSSNMNDQDNSRPTHSTIPFDASPSSVRVSESEKRTAQIYRF 1143
Match: A0A7J7H5S8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5948332.1}))
HSP 1 Score: 369.392 bits (947), Expect = 2.121e-105
Identity = 344/1058 (32.51%), Postives = 500/1058 (47.26%), Query Frame = 0
Query: 144 RTRFNEKRNRKMKSRDLTLVN-VSMNSKKRKSGMKKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTASPHILEYAKKLGDAAGKRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMKS--------APHDAVSSETNLLAE-------ERDKFCPLNVDKSKGNSSINREENNEFFSVTEKSTPDTCLCVEKFCFSRPR-DSQENLVDRPVASNKFAYYSDH------GYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGA--CFKDCVTSFPQASSSSYVSKENWNA---CGGQISPHSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQLAS-GKGGFNQTIRP--AIFTDSSRTLAFCTEPPSNQDGQLSF--INHDERLPSEKLCHVLSSHGQFKEKPNSMESSSL---------GTTSGTDASLEFRSCDPIYPYKSGINLMSLPSQS-NRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRN--SHEGQKVWMDNQIMVHHDGNAISYES---SRHFQQDLMMQRGIEKNKR-IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHA-QPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIA-RPPIRPR---FLPTSTMNEKREYRLKFKERIKARLCVKDP-QSKRTKKKPGSKP---------VKLTTPGDMS-SGVTVSKLVGDAE---IGALERKETTVLDRSGDVAKTIISASKPGNPLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPFTTQSDSAIPLESHP--SKIYR 1131
R R + +K K R L L + +++ +K S KG +D+ K K P+ K + A K+ K SKL + ++K+VF ILK K +SG+ N+ S++ N + +R VR S KDDIL R K P+ S+ + A ER K + VD S + SI+ E E ++E+ DTC C++ F RP QE+L DR + N+ A S++ GY AS + AC P S+ K Y PS+ T+ ++ + + ++I + DP A C V +FP SSS + N N C Q + + Y + L+Y P HLSPKELM S+CS + +QR+ + + D+ GLPLNSHGE IQ S GKG FN IRP + T SSR+LA + +F N+ P+ V KE PN SS L T S SLE S + LM++ Q N+ +Q QN D + + + TQPTMRLMG+EF++G++ R+ ++E KVW D QI+ H + +S R QQDL++ K K +A SE QI+ SQS Q+ P S FS P + C+T+ Y N G + Q +PYLP SP +F++ QE F+ +ESL LN Q + +S+ +++SS +N + L H+T SAF+FPFL+ D GEH +P QSSSKS+ LL+A Q E+++GS Q YS+ H +S + + + +V Y +NP++ S +QN A A PP+ P F+ TS +N+ R+KFKER+ R+ VK+P Q K+T+K+P +K KLT D S + + + + G A G +E T D G + + + G GP+KL+AGAKHI PS + SK THS VPF + S ES ++IYR
Sbjct: 258 RDRLVQSIAKKEKPRKLKLQSAINIGTKPNSSSDGKGLRKGILDVVTSHKKK---PRVKCS----------------------ATHKKNKLLQTSKL-IKQQKTVFPVRSILKNKKKGISGEHPMVCNS-KISSQVNQFGSTQVDRRVRFSDKDDILGPRRKDFSSVDCPKVPNVCGSNYNAIPAASVKDHGTERGKDLTIEVDGSDEDVSISTENETEVQPISERQLSDTC-CLDTPNFLRPHMGCQEHLSDRSMTVNQVALRSENSQTIEQGYRDASHEPLYACSPRFPSLPKEGYNPSVNTQVGADILRASNTSDRLIEYQSGDPTSSAAAVCSMGYVKAFPPPSSSYFAMNGNTNGRLPCPSQ----NTTVNYNNKALQYQPFRHLSPKELMRSICSFPDWKQRAVTGKEKCMDEDFCGLPLNSHGEIIQFNSIGKGMFNHLIRPPTSTVTGSSRSLAVHNMLTNGTVNLSNFKDTNYVGGAPTVDQLKVFPVRSCVKENPNIPVSSRLDYKVLKEQMSTVSTLSISLE-----------SDLELMNISQQGHNQYNQVQNQIGDGKGNQQGSSDHVPMRVTQPTMRLMGKEFTVGRSARDLQAYEDGKVWTDKQIIAEHRQANTAMDSLSLGRQLQQDLIVHSASGKLKENVACLSEPQINQASQSTIQMKNPGSGFSYPYLNCKTDTGYPNCYPTISGNHISQLHPYLPSAASPPLFSRTPLLQEAFISGYESLKLNAQIPKLAST--PRRNMSS---QNKQKL--HHATKSAFEFPFLHPDCGEHVRRPSWFQSSSKSLPPWLLSATQQKETSLGSCQSYSDVGGKRHSCTMSGTSLRN---IPSVPEVSYPYNPMSSNSAMQNFLGPAPFAHHPPLMPLSRGFIQTSGINKIHGDRMKFKERMIPRVSVKEPFQGKKTRKRPAAKSDDSAKLTKIPKLTVQEDSSIAALELDSIRGKARSVGCGVIE----TRTDELGVSPAVVDTFNVDGIARSGPIKLSAGAKHILKPSSN-LNQDSSKPTHSTVPFAAATISGRVSESEKKSAQIYR 1257
Match: A0A2R6QXC7 ((Protein EMBRYONIC FLOWER like {ECO:0000313|EMBL:PSS16387.1}))
HSP 1 Score: 343.969 bits (881), Expect = 8.271e-98
Identity = 377/1223 (30.83%), Postives = 549/1223 (44.89%), Query Frame = 0
Query: 1 MERFSIREYTCQMRSVDVMKCWPFGPTNIEYVQAFLPAITVKKFKWWTDELENELTEDLTCPVCFVFKALSTQELNGHVSRCIV--QLGNTENSRMRAKSRMPKKRSIVELFAVAPQVDKVYEDED------------EDGDDLSDQDDHVKLSAMIRTRFNEKRNRKMKSRDLTLVNVSMN---SKKRKSGMKKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTASPHILEYAKKLGDAAG--------------KRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILER-------RMKSAPHDAVSSETNLLAEERDKFCPLNVDKSKGNSSINREENNEFFSVTEKSTPDTCLCVEKFCFSRPR-DSQENLVDRPVASNKFAYYSD------HGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFPQASSSSYVSKENWNACGGQISP-HSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQL-ASGKGGFNQTIRP-AIFTDSSRTLAF-CTEPPSNQD-GQLSFINHDERLPSEKLCHVLSSHGQFKEKPNSMESSSLGT----TSGTDASLEFRSCD---PIYPYKSGINLMSLPSQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRNSH--EGQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKNKR----IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLP--PDYSPAIFNKGSSSQETFVCEHESL-PLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRP---RFLPTSTMNEKREYRLKFKERIKARLCVKD-PQSKRTKKKPGSK------PVK---LTTPGDMSSGVTVSKLVGDAEIGALERKETTVLDRSGDVAKTIISASKPGNPLE-------GPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPFTTQSDSAIPLESHP--SKIYRF 1132
E FSIREY MR VDV K WPFG + + ++ LP ITVKKF+WW+DELE + +C E+N +S ++ +L + +M+ SR PKKRSIVE+FAVAPQV++V +D+D + L+ D L + +T+ + +K +D L + SK +K+G+K K+K L PK +R F T + +S + K + +A K+ K SKL + +KK++F ILK H K +S + ST++ +N N + +R VR S KDDILE S+ A S + L +D P V+ S+ + S++ E E EK DTC ++ F RP E+L DRP N+ +S+ G+ AS P S+ K Y P + ++ +SH D ++ S+ Y S N N G P + + Y ++Y P H SPKEL H R + GR + ++GLPLNS GE I L +SGKG NQ RP + T SSRTLA T S D + N P++ KE PN SS+ G+ T TD + + +Y +S + LM++ + Y+ +N E GNG PTMRLMG+EF++G++ ++S E KVW D QI+ H + +SS R F +D ++ R +K+ + SE +I+ + + PP S F P + C+ +A Y N A G P+ +PYLP SP F + Q+ FV +SL P + P ASS + SSN E PH+T SAF+FPFL D GEH +P QSSSKS+ L+ A Q E+ +G Q YS+ HH + N Q + Y +N S N AS R P P +F+PTS++N+ R+KF+ER R+ K+ Q K+T+K+P +K P K LT D +S + S V E+ ++ KE+ V D+ + S + L+ GP++L+AGAKHI PS +S+ THS +PF SA ES ++IYRF
Sbjct: 5 FEGFSIREYASMMRDVDVAKSWPFGGESADEIRTVLPPITVKKFRWWSDELELLGRSEERSKICEQNVDQEEIEVNPELSEMVLGEKLIQSREIKMKKSSRTPKKRSIVEIFAVAPQVERVDDDDDDEEEVCSEEKETHNSKVLALADVVCYLESKGKTKKMMAKKKKPNLKDEALRKLKKQKRMSKAKKNGLK--------------KEKPLNPKLQRRFILTSKLNSSLYSEGSGKDILNATSIHKKKPIAKCLATKKKNKLVQTSKL-IKRKKAIFPVRGILKNHKKGLS-VEHSTVSNSQIANLVNQFAVPQPDRRVRFSDKDDILEHPKLRNVCSFTSSASTASSGKDYTLERGKDLATP-EVNGSEEDVSMSTESEIEVRPAGEKQLSDTCF-LDIPNFLRPHVVGLEHLSDRPTIVNQVGLHSENLQTFKQGFRDASHGPLFDRTPSFISLPKEGYNPCLNAHVGPDIPR--------VSHPGD--------------RLIESQSNPYFST-NGNISGKFSCPSQNTTVNYGSHSMQYQPFVHFSPKELTH----------RVVMCEGRCMDEGFSGLPLNSQGELIHLSSSGKGALNQLTRPTSTLTGSSRTLAVHNTLKNSTMDLSKCKDKNCYGGAPAKDQLKTFRDWNFMKEYPNLPVSSTSGSRIQGTGRTDVHCLYSVGENNRSVYRLESDLELMNISHHGQK-----QYNQVQNQIRE-------GNGP-PTMRLMGKEFTVGRSSKDSQSFEDGKVWTDKQIIAEHRPANAAIDSSALERRFLRDFIV-RPASSDKQPFHNVVCLSEAKINQSVKGSLPMKPPGSGFPHPYLNCKPDAGYRNTYPAVDGNRFPKLHPYLPSAAAASPPFFTQSPLFQDQFVFGFDSLKPTSQIPKFASSPRG---NTSSNPVELQNRQKLPHATKSAFEFPFLRPDCGEHVKPSWFQSSSKSLPPWLVTATQQKETLLGPCQSYSDVVGRHHPRPM-YNPLQH------PPEASYPYN--YFHSTGHNSLGPASFHRSPFMPLCGKFIPTSSINKLHGERMKFRERPTPRVSSKEVDQDKKTRKRPAAKSSESQRPAKVPNLTFQEDSNSDPSPSANVAALELESIRDKESGVECAQTDIQTGGMRVSPVIDTLKVDEITRSGPIRLSAGAKHILKPSSNTNDQDNSRPTHSTIPFDASPSSARVSESEKRTAQIYRF 1150
Match: A0A5B7BEG1 ((Uncharacterized protein {ECO:0000313|EMBL:MPA66051.1}) (Fragment))
HSP 1 Score: 329.717 bits (844), Expect = 1.682e-97
Identity = 239/630 (37.94%), Postives = 339/630 (53.81%), Query Frame = 0
Query: 539 LPLNSHGEYIQL-ASGKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQL---SFINH--DERLPSEKLCHVLSSHGQFKEKPNSMESSSLG-----TTSGTDASL---EFRSCDPIYPYKSGINLMSLPSQSNRT-DQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRNSH--EGQKVWMDNQIMVHH---DGNAISYESSRHFQQDLMMQRGIEKNKR-IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQ-PVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRPRF---LPTSTMNEKREYRLKFKERIKARLCVKDP-QSKRTKKKPGSK---PVKLTTPGDMS-----SGVTVSKLVGDAEIGALERKETTVLDRSGDVAKTIISASKPGNPLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPFTTQSDSAIPLES--HPSKIYRF 1132
LPLNS GE IQ +SGKGGFNQ +R + T SSR+LA +D + S NH D R P ++ + KE N SS LG +T TD + +P +S ++LM++ + DQ QN + ++P+ +P TQPTMRLMG+EF++ ++ ++ E +KVW D QI+ H D A + R FQQDL++ + K +A SSEIQ + S SV ++ PP+ RFS P + CQT+ VY+N +P +++PY PP SP FN+ QE F+C +ES +N Q P++AS+ +N YQS+SSN AE P++T S FKFPFL D GEH QP QSSSKS+ LLNA Q E+ IGS Q YS+A SH+ +S NF+ +R + Y+ NPL+ SPLQN A++A P+ P +PTS++ + R+K K R+K ++C KDP K+T+K+P +K K T ++ S VT K G+ RK T LD + D A ++ G GP+KL+AGAKHI P + M ++++ THS +PF + S ES +KIYRF
Sbjct: 1 LPLNSQGELIQWNSSGKGGFNQLMRASTITGSSRSLA--------EDNNVLPNSTRNHCRDGRAPPKEQLKLFPVQSCVKENHNLPISSRLGMTDLRSTGRTDVQWLDSARENNHSFHPLESDLDLMNISHNGRKQYDQVQNRIGNGKIHPQGNPAHASLPVTQPTMRLMGKEFTVVRSSKDLQGVEDEKVWKDKQIIAEHRPADNAADNSVVKRQFQQDLIVHPVSGRVKETVACSSEIQTNQASNSVLRMKPPEFRFSHPYLNCQTDIVYQNGSGTINRIPDSRSHPYSPPAISPEFFNRPPIFQEPFICGYESRKVNSQIPMQASTLHNTYQSMSSNSAEIKYKQKLPYATKSHFKFPFLRPDCGEHVQPPWFQSSSKSLPPWLLNATQQKETLIGSCQLYSDAGGSHYPCTMSGANFRTVPSLRSAPEASYLCNPLSSHSPLQNSLGPAALAHHPLMPIHSGCIPTSSIYKSCGQRMKGKGRMKLKVCAKDPDHGKKTRKRPAAKSDDSTKRTKIPNLELQEDCSTVTAMKASGNFGGEMQFRKGTLELDSNRDTASSV------GMARSGPIKLSAGAKHILKPC-QNMDQNNTRHTHSTIPFAAATSSGRVSESDKKSAKIYRF 615
Match: A0A2I4DND7 ((uncharacterized protein LOC108981852 isoform X1 {ECO:0000313|RefSeq:XP_018808652.2}))
HSP 1 Score: 334.724 bits (857), Expect = 5.797e-94
Identity = 368/1276 (28.84%), Postives = 564/1276 (44.20%), Query Frame = 0
Query: 1 MERFSIREYTCQMRSVDVMKCWPFG-----PTNIEYVQAFLPAITVKKFKWWTDEL-------------------ENEL------------------TED----LTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSR-MRAK-SRMPKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNE----KRNRKMKSRDLTLVNVSMNSKKRKSGM----------KKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTASPHILEYAKKLGDAA--------------GKRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMK---------SAPH--DA-VSSETNLLAEERDKFCPLNVDKSKGNSSINREENNEFFSVTEKS-TPDTCLCVEKFCFSRP----RDSQENLVDRPVASNKFAYYSD--HGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFPQAS---SSSYVSKENWNACGGQISPHSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQLAS-GKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQLSFINHDERLPSEKL---CHVLSSHGQFKEKPNSMESSSLGTT-----SGTDA-SLEFRSCD--PIYPYKSGINLMSLPSQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRNSHEGQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKNKR-IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRPRFLPTSTMNEKREY--RLKFKERIKAR-LCVKDPQSKRTKKKPGSKP-----------VKLTTPGDMSSGVTVSKLVGDAE--IGALERK----ETTVL-------DRSGDVAKTIISASKPGN-PLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPF--TTQSDSAIPLESHPSKIYRF 1132
+ FSIREY +MR+VD+ KCWPFG E ++ LP ITV KF+WW+ EL E EL ED + CPVC VF A + +N H+ C+ Q E R M+AK S+ PKKRSI E+FAVAPQ++ V D DE GD+ S + S +R N K + + R +SGM K ++A + SI +K+ L K + T S + + + DA+ KR K ASK ++K VF ILK H KV+ G T S + N + S+RHVR SGKDDIL R K ++ H DA +S L++ERDK P+ +D ++ + + + + +T V+ RP +D ++ ++PV+ ++ A ++D H + A + C + + N+ + K I H+VD G +++ +S SS +VS EN N +S SA++ + G + Y P H SP ELM+S+ E +QR+ + + + GLPLNS GE I +S G+G F+Q + P+ SS +L G + + E ++ E P + G T +DA L F + + S +NL + +Q QN +N R ++PE++P+ ++ N TQPTMRLMG++ ++G++ + E KVW D +I+ + E+S R+F QD M+ K K +A+S IQ + +Q +SR S+P + QTNA+++N F P ++ ++ S F S +E F E+L +H AS+ + + Q + + E + QPH+T SAF FPFLYTD E QPY Q SS+S+ LL+A Q ++ I S QF S+ ++ IS NF SQ V ++V Y P+ QS ++ SI P + P +T EY R+KF++++K++ +KDP + K+P +K +++ + G+T D + + ER +T+ L + G T I SK + GP+KLTAGAKHI PS + +S+L HS +PF T +SA + +KIYRF
Sbjct: 5 FQGFSIREYAAKMRTVDLGKCWPFGVDPAEEMKKEDIKLLLPPITVTKFRWWSHELHGGRKHDQIHGGNANVRGEEVELRRNGSELDAERAEFKKSQAEDEKLEMVCPVCLVFTAATVNAVNAHMDSCLAQPSKKEARRQMKAKTSKAPKKRSIAEIFAVAPQIEAVDVD-DESGDEDSSGGGEMFGSCKFSSRDNVVSIIKGKKNINKRMKLKKKKKKKRALEESGMAIVSKLKKNKKFMKKAAVKNGSIAKKETLHKIKLPAHVDFTVKPNGSFCNKRFPEDILDASFIRGKKPSLKCLSLQKRLKVVQASKFIAKQQKPVFPVRSILKAHKKVIPGLNSVTC-PLQCSTQINHSGIHRSDRHVRFSGKDDILGPRTKKISDAFVHCTSKHFSDAFAASSEECLSDERDKVSPMEIDGTQDVVFASTDNGTGVLPIAGREHLLNTHGHVDIQKNLRPHVTCQDKAKHFPEKPVSPSQVAIHNDEVHRFVSALDGRHNTC---------------VNAQVGGNVVRAFNESGKSIDHFVDSIH--GVPVISSISNTRLSSPPSSSCFVSDENANRRLPFLS-QSATQNFNGHTMHYQPHCHASPMELMNSVRLFPEWKQRAVSVREKCMDDGFFGLPLNSQGELIPFSSSGQGAFDQLMLPSSVHHSSSSLPVHNLVMRQSIGDYWSVKKRQIAEGEHSKDPLNLFPVQNYVIENPKVHLPARFGVTELEATGRSDAHGLNFERLNHHSVSQLDSDLNLSFGGCRQYNQEQDQN-ANGR-VHPEKYPDKMILNSTQPTMRLMGKDLAVGRSSK--FEDGKVWTDKEIIAEDCPASTVLENSFMERNFLQDWMLHPASRKPKESVANSLAIQCNHTAQDNLMTKASESRISNPFLNWQTNALHKNGSLTFNENP-SNSHSFVHSPASSGAFRGAPSFREPFPSGAEALRGSHYLPLASTPHISCQHIPWSPVEFNHK-NQPHATKSAFNFPFLYTDCREDVQPYWFQRSSESLPPWLLHAQQ-DKQLITSSQFISDLGHNYPPQLISGTNFFPSQPVNHLSEVSY---PVKSQSHFKSSLGSTSILHPALVPVIPTVNTPAVNMEYGNRIKFRDKLKSKAFGIKDPNPCKKTKRPTAKADCSTKATRIPNLQMQKDLNAVMGLTSENFGRDIQSNVAVAERNPRRDKTSSLGCGSNESSKDGLRNSTGIDFSKDHDLARSGPVKLTAGAKHILKPS-QAADQDNSRLIHSTLPFAVATNCESAQESQKKLTKIYRF 1249
Match: A0A061DKK8 ((Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOX92977.1}))
HSP 1 Score: 325.865 bits (834), Expect = 7.162e-91
Identity = 356/1284 (27.73%), Postives = 559/1284 (43.54%), Query Frame = 0
Query: 1 MERFSIREYTCQMRSVDVMKCWPFGPT---------------NIEYVQAFLPAITVKKFKWWTDELE-------------------NELTED-------------------------LTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSRMR-----AKSRMPKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNEKRNRKMKSRDLTLVNVSMNSKKRKSGMKKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTA---SPHILEYAKKLGD----AAGKRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMKSAPHD--AVSSETNLLAEERDKF------CPLNVDKSKGNSSINREENNEFFSVTE-----------KSTPDTCLCVEKFCFSRP----RDSQENLVDRPVASNKFA------YYSDHGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFP--QASSSSYVSKENWNACGGQISPHSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQL-ASGKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQLSFINH--DERLPSEKLCHVLSSHGQFKEKPNSMESSSLGTTSGTDASLEF-------RSCD-PIYPYKSGINLMSLP-SQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGK--NYRNSHEGQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKNKRIASSS-EIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRPRF---LPTSTMNEKREYRLKFKERIKAR-LCVKDPQ-SKRTKKKPGS------KPVKLTTPG--DMSSGVTVS---KLVGDAE--IGALE----RKETTVLDR-------SGDVAKTIISASK-PGNPLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPFTTQSDSAIPLESHP--SKIYRF 1132
E FSIREY +MRS+DV+KCWPF N + V++ LP ITV KF+WW++EL+ N+L E L CPVC F A + LN HV C+ Q E +MR KSR PKKRSIVE+FA APQ+ KV ED ED ++L D+D++ + + + + +K K + + + +K K K ++ D + I+ + L + FN N T + + KK +A K+ K ASK + + ILK K++SG+ + N S +A+ C HS RHV G+DD+L PH A S E + + D F + DK IN ++ TE + PD V+ F RP ++ + N D+ + + + + S+ G + A + P S K P I ++ S + ++ + V Y D ++ A T+ Q SSS + +N N + ASE G L + P+ HLSP ELM LC E +Q++ + R+ ++ GLPLNS GE +Q ++GKGGFNQ + + SS +++ P D + H P+ +L + + KE + LG T E R C+ + S +NL ++ S + DQ QN + + + + + N PTMRLMG++ +I + + R KVW +I+ H ++S RHF QD ++ + K EI+ + S + P +S F P + Q N + N+ P P ++ + S AIF G+ QE F+ +E+L ++ Q AS+S+ YQ+++ + E+ ++ S+F FPFL+ D GEH QP + SSKS+ LL A Q ++ Q + + H H + + +F + V V Y HNP+ S +++ IA P+ P P+S +N R+KFK+R+K + + ++DP ++T+K+P + KP+K+ + G D S T S D + +G+LE R E ++ +G A +I +SK G GP+KL AG KHI PS + + +S+L HS +PF + +D LE+ +KIYRF
Sbjct: 5 FEGFSIREYASKMRSIDVVKCWPFSGASSSSLDDDDNGNSRINKQTVESLLPPITVTKFRWWSEELDRLKSTELANIQSSSSNMENNKLQETQLRNQNNLLQVYLHVEEKSDERLDMLECPVCGAFAASTVNALNAHVDSCLAQASREERRQMRMAIKATKSRAPKKRSIVEIFAAAPQIHKV-EDAAED-NNLLDEDENGSFKSELNCKIERPKKKKKKKKVAIVKKLMKKKRKMKKNKNKNKKKDGL-IANEENGSKLKLQIPVNFNRKPNNTLCNRGSNAVSILKKKPSIKCLSAKKKNKVVQASKPIVEHENRNSPVRGILKNPPKIISGQNAAMCNVRAIS-QASTCGVQHSARHVSFLGQDDML------GPHKKHATSFEKGICGIDLDSFDLSKKGHWIEGDKEFPAREINGSDDEGVSFSTENGIGVQAMMEKQQLPDIHHNVDIPKFLRPCIVEQEKENNFSDKSLPTGQVVVDSGNLHMSNQGNQTALRNPLYTGVPRLFSSVKEVQNPFINSQVCGGAS-TASNYSSVFVDYFGDHTQEVASISSKATARASLQPSSSGFALSKNVNE-SAPFASQFASETVSGYALSHQPLYHLSPIELMGRLCPFPEWKQKAVAFREKYRDEEFFGLPLNSQGELVQANSTGKGGFNQLKKSTPASGSSNSISNLVLPTRIDDHSILKGKHFIGSAHPNNQLS-LFPAQYHMKENATVHSPARLGATQSQGPRKEDGYCLNSDRRCNRSVCLMDSDLNLTNISFSGCGQYDQFQNQKEKGITHAKENADKMHLNRPPPTMRLMGKDVAICRSSDERQGFADGKVWTHKEIIREHHPQGTVLQNSYVDRHFTQDWLLNPASGQFKETPDQRFEIESNQAFPSNAFMKPLESNFFQPGLNWQANPEFHNSSLTIARNPDPNSHHFAHSPTSHAIFENGADFQEPFISRNENLRVSSQLPSASTSHRIYQNINGSSVEHKYKQNLQNAVKSSFNFPFLHPDQGEHVQPSWFRGSSKSLIPWLLQATQQVKAPCTPSQPFPDEGGRRHPHTMQT-SFLTNPLVPHLPIVSYDHNPMISHSHMESPVGQPYIAHSPLIPALPGIKPSSPVNMSHRNRIKFKDRMKLKSVGIQDPDICRKTRKRPRAKEDCPMKPIKIPSLGIQDKSRAATRSTRENFFDDIQCNMGSLEIDPYRDEAGLVGWIPNEPRCNGFGASAVIDSSKIDGVTRPGPIKLGAGVKHILKPS-QNVDQDNSRLIHSTIPFASVTDCGNILETQKKSTKIYRF 1273
Match: A0A2I4DNE2 ((uncharacterized protein LOC108981852 isoform X2 {ECO:0000313|RefSeq:XP_018808657.2}))
HSP 1 Score: 321.627 bits (823), Expect = 1.707e-89
Identity = 366/1279 (28.62%), Postives = 562/1279 (43.94%), Query Frame = 0
Query: 1 MERFSIREYTCQMRSVDVMKCWPFG-----PTNIEYVQAFLPAITVKKFKWWTDEL-------------------ENEL------------------TED----LTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSR-MRAK-SRMPKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNE----KRNRKMKSRDLTLVNVSMNSKKRKSGM----------KKGREADTIDISIDRK--DKLLAPKQ-KRTFNPTENVTASPHILEYAKKLGDAAGKRTKAFGASKLTLGKKKSV--------------FSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMK---------SAPH--DA-VSSETNLLAEERDKFCPLNVDKSKGNSSINREENNEFFSVTEKS-TPDTCLCVEKFCFSRP----RDSQENLVDRPVASNKFAYYSD--HGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFPQA---SSSSYVSKENWNACGGQISPHSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQL-ASGKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQLSFINHDERLPSEKL---CHVLSSHGQFKEKPNSMESSSLGT-----TSGTDA-SLEFRSCD--PIYPYKSGINLMSLPSQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGKNYRNSHEGQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKNKR-IASSSEIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRPRFLPTSTMNEKREY--RLKFKERIKAR-LCVKDPQSKRTKKKPGSKP-----------VKLTTPGDMSSGVTVSKLVGDAE--IGALERK----ETTVL-------DRSGDVAKTIISASKPGN-PLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPF--TTQSDSAIPLESHPSKIYRF 1132
+ FSIREY +MR+VD+ KCWPFG E ++ LP ITV KF+WW+ EL E EL ED + CPVC VF A + +N H+ C+ Q E R M+AK S+ PKKRSI E+FAVAPQ++ V D DE GD+ S + S +R N K + + R +SGM K ++A + SI +K K+ P T P + + + + DA+ R K L+L K+ V F ILK H KV+ G T S + N + S+RHVR SGKDDIL R K ++ H DA +S L++ERDK P+ +D ++ + + + + +T V+ RP +D ++ ++PV+ ++ A ++D H + A + C + + N+ + K I H+VD G +++ + SSS +VS EN N +S SA++ + G + Y P H SP ELM+S+ E +QR+ + + + GLPLNS GE I +SG+G F+Q + P+ SS +L G + + E ++ E P + G T +DA L F + + S +NL + +Q QN +N R ++PE++P+ ++ N TQPTMRLMG++ ++G++ + E KVW D +I+ + E+S R+F QD M+ K K +A+S IQ + +Q +SR S+P + QTNA+++N F P ++ ++ S F S +E F E+L +H AS+ + + Q + + E + QPH+T SAF FPFLYTD E QPY Q SS+S+ LL+ AQ ++ I S QF S+ ++ IS NF SQ V ++V Y P+ QS ++ SI P + P +T EY R+KF++++K++ +KDP + K+P +K +++ + G+T D + + ER +T+ L + G T I SK + GP+KLTAGAKHI PS + +S+L HS +PF T +SA + +KIYRF
Sbjct: 5 FQGFSIREYAAKMRTVDLGKCWPFGVDPAEEMKKEDIKLLLPPITVTKFRWWSHELHGGRKHDQIHGGNANVRGEEVELRRNGSELDAERAEFKKSQAEDEKLEMVCPVCLVFTAATVNAVNAHMDSCLAQPSKKEARRQMKAKTSKAPKKRSIAEIFAVAPQIEAVDVD-DESGDEDSSGGGEMFGSCKFSSRDNVVSIIKGKKNINKRMKLKKKKKKKRALEESGMAIVSKLKKNKKFMKKAAVKNGSIAKKTLHKIKLPAHVDFTVKPNGSFCNK----RFPEDILDASFIRGKKPSLKCLSLQKRLKVVQASKFIAKQQKPVFPVRSILKAHKKVIPGLNSVTC-PLQCSTQINHSGIHRSDRHVRFSGKDDILGPRTKKISDAFVHCTSKHFSDAFAASSEECLSDERDKVSPMEIDGTQDVVFASTDNGTGVLPIAGREHLLNTHGHVDIQKNLRPHVTCQDKAKHFPEKPVSPSQVAIHNDEVHRFVSALDGRHNTC---------------VNAQVGGNVVRAFNESGKSIDHFVDSIH--GVPVISSISNTRLSSPPSSSCFVSDENANRRLPFLS-QSATQNFNGHTMHYQPHCHASPMELMNSVRLFPEWKQRAVSVREKCMDDGFFGLPLNSQGELIPFSSSGQGAFDQLMLPSSVHHSSSSLPVHNLVMRQSIGDYWSVKKRQIAEGEHSKDPLNLFPVQNYVIENPKVHLPARFGVTELEATGRSDAHGLNFERLNHHSVSQLDSDLNLSFGGCRQYNQEQDQN-ANGR-VHPEKYPDKMILNSTQPTMRLMGKDLAVGRSSK--FEDGKVWTDKEIIAEDCPASTVLENSFMERNFLQDWMLHPASRKPKESVANSLAIQCNHTAQDNLMTKASESRISNPFLNWQTNALHKNGSLTFNENP-SNSHSFVHSPASSGAFRGAPSFREPFPSGAEALRGSHYLPLASTPHISCQHIPWSPVEFNHK-NQPHATKSAFNFPFLYTDCREDVQPYWFQRSSESLPPWLLH-AQQDKQLITSSQFISDLGHNYPPQLISGTNFFPSQPVNHLSEVSY---PVKSQSHFKSSLGSTSILHPALVPVIPTVNTPAVNMEYGNRIKFRDKLKSKAFGIKDPNPCKKTKRPTAKADCSTKATRIPNLQMQKDLNAVMGLTSENFGRDIQSNVAVAERNPRRDKTSSLGCGSNESSKDGLRNSTGIDFSKDHDLARSGPVKLTAGAKHILKPS-QAADQDNSRLIHSTLPFAVATNCESAQESQKKLTKIYRF 1248
Match: A0A6J0ZH78 ((uncharacterized protein LOC110409142 {ECO:0000313|RefSeq:XP_021274072.1}))
HSP 1 Score: 319.316 bits (817), Expect = 1.591e-88
Identity = 357/1286 (27.76%), Postives = 552/1286 (42.92%), Query Frame = 0
Query: 1 MERFSIREYTCQMRSVDVMKCWPFG-----------------PTNIEYVQAFLPAITVKKFKWWTDELE-------------------NELTED-------------------------LTCPVCFVFKALSTQELNGHVSRCIVQLGNTENSRMR-----AKSRMPKKRSIVELFAVAPQVDKVYEDEDEDGDDLSDQDDHVKLSAMIRTRFNEKRNRKMKSRDLTLVNVSMNSKKRKSGMKKGREADTIDISIDRKDKLLAPKQKRTFNPTENVTA------SPHILEYAKKLG-DAAGKRTKAFGASKLTLGKKKSVFSFHCILKKHSKVVSGKKKSTINTFPDSNEANWCSTNHSNRHVRISGKDDILERRMKSAPHD--AVSSETNLLAEERDKF------CPLNVDKSKGNSSINREENNEF-FS----------VTEKSTPDTCLCVEKFCFSRP----RDSQENLVDRPVASNKFA------YYSDHGYEVASPDSSSACPPGSGSMRKMTYKPSITTRGDENLSMSCTSKAKVISHYVDDPRRDGACFKDCVTSFP--QASSSSYVSKENWNACGGQISPHSASEKYPGQILRYHPIPHLSPKELMHSLCSPSEMEQRSEVHLGRPRNGDYTGLPLNSHGEYIQLAS-GKGGFNQTIRPAIFTDSSRTLAFCTEPPSNQDGQLSFINH--DERLPSEKLCHVLSSHGQFKEKPNSMESSSLGTTSGTDASLEF-------RSCD-PIYPYKSGINLMSLP-SQSNRTDQSQNYSNDRNMYPERHPNLILGNGTQPTMRLMGQEFSIGK--NYRNSHEGQKVWMDNQIMVHHDGNAISYESS---RHFQQDLMMQRGIEKNKRIASSS-EIQIDMLSQSVFQIIPPDSRFSSPSIGCQTNAVYENACRAFGGVPVPQTYPYLPPDYSPAIFNKGSSSQETFVCEHESLPLNHQPVRASSSYNAYQSLSSNYAENSRMLPQPHSTSSAFKFPFLYTDLGEHAQPYNCQSSSKSITSSLLNAAQANESTIGSFQFYSNATDSHHHHCISSNNFQKSQFVRCTTDVPYIHNPLTIQSPLQNGPNLASIARPPIRPRF---LPTSTMNEKREYRLKFKERIKARLC-VKDPQ-SKRTKKKPGS------KPVKLTTPG--DMSSGVTVS---KLVGDAEIGALERKETTVLDRSGDV--------------AKTIISASKPGNPLEGPLKLTAGAKHIFNPSGECMYSSDSKLTHSKVPFTTQSDSAIPLESHP--SKIYRF 1132
E FSIREY +MRS+DV+KCWPF N + +++ LP ITV KF+WW++EL+ N+L E L CPVC F A + LN HV C+ Q E +MR KSR PKKRSIVE+FA APQ+ KV ++ D ++L D+D++ + + + + + + L M K K+ K G A+ + S K KL P FN N T + IL L +A K+ K ASK + +K + + ILK K++SG+ + N S +A+ C HS RHVR SG+D +L PH A S E ++ + D F C + DK IN ++ FS + ++ PD V+ F RP ++ + D+ + + + + S+ G + A + P S K P I ++ S + ++ + V Y D ++ A T+ Q SSS + +N N + ASE G L + P+ HLSP ELM L E +Q++ + R+ ++ GLPLNS GE +Q S GKGGFNQ + + SS +++ P D L H LP+ +L + + KE + LG T E R C+ + S +NL ++ S + DQ QN + + + + N PTMRLMG++ +I + + R KVW +I+ H ++S RHF QD ++ K K EI+ + S + P +S F P + Q N + N+ P P ++ + S AIF G+ QE F+ +E+L ++ Q AS+S+ YQ+++ + E+ ++ S+F FPFL+ D GEH QP + SSKS+ LL A Q ++ Q + + H H + + +F + V V Y HNP+ S +++ IA P+ P P+S++N R+KFK+R+K + ++DP ++T+K+P + KP K+ + G D S T S D + + D +G V + I S+ G GP+KLTAG KHI PS + + +S+L HS +PF + + LE+ +KIYRF
Sbjct: 5 FEGFSIREYASKMRSIDVVKCWPFSGAAASSSSLDDDDNGNSKINKQTMESLLPPITVTKFRWWSEELDRLKSTELANIQSSSSNMENNKLQEAQLRNQSNLLQVYLHVEEKSDERLDMLECPVCGAFAASTVNALNAHVDSCLAQASREERRQMRMAIKATKSRTPKKRSIVEIFAAAPQIHKV--EDAADDNNLLDEDENGSFKSELNCKIERPKKKVAIVKKLMKKKRKMKKSKNKNKKKDGLIANEENGS---KLKLQIPV---NFNRKPNNTLCNRGSNAVSILRKKPSLKCLSAKKKNKVVQASKPIVEHEKPISAVRGILKNPPKIISGQNAAMCNVRATS-QASTCGVQHSARHVRFSGQDGML------GPHKKHATSFEKSICHIDLDSFDLSEKGCWIEGDKEFPAREINGSDDEGVSFSTGNGIGVQSMMEKQQLPDIHCNVDIPKFLRPHIVEQEKANHFSDKSLPTGQVVVDSGNLHMSNQGNQTALHNPLYTGVPRLFSSVKEVQNPFINSQVCGGAS-TASNYSSVFVDYFGDHTQEVAAISSTATARASLQPSSSGFALSKNVNE-SAPFTSQFASENVSGHALSHQPLYHLSPIELMGRLGPFPEWKQKAVAFREKYRDEEFFGLPLNSQGELVQAKSTGKGGFNQLKKSTPASGSSNSISNLVLPMRIDDHSLMKGKHFIGSALPNNQLS-LFPAQYHMKENATVHSPARLGATQSQGPRKEDGYRLNSDRRCNRSVCLMDSDLNLTNISFSGCGQYDQFQNQKEKGITRAKENADKMHLNRPPPTMRLMGKDVAICRSSDERQGFADGKVWTHKEIIREHHPQGTVLQNSYVDRHFTQDWLLNPASGKFKEAPDQRFEIESNQAFPSNVFMKPLESNFLQPGLNWQANPEFHNSSLTIARNPNPNSHHFAHSPTSHAIFENGADFQEPFISRNENLRVSSQLSSASTSHRIYQNINGSSVEHQYKQNPQNAVKSSFNFPFLHPDQGEHVQPSWFRGSSKSLIPWLLQATQQVKAPCTPSQPFPDDGGRRHPHPMET-SFLPNPLVPHLPIVSYDHNPMISHSHMESPVGQPYIAHSPLIPALPGIKPSSSVNMSHRNRIKFKDRMKLKSAGIQDPDICQKTRKRPRAKEDCPMKPTKIPSLGIQDKSRAATRSTRENFFDDIQCNMGSPEIDPYRDEAGLVGWIPNEPRCNGFGTSAGIDSSKIDGVTRPGPIKLTAGLKHILKPS-QNVDQDNSRLIHSTIPFASVTGCGNILETQKKSTKIYRF 1270
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7ALN7 | E-Value: 8.392e-172, PID: 34.99 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5598... [more] |
| A0A5J5A8L7 | E-Value: 1.622e-131, PID: 33.13 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8526... [more] |
| A0A2R6QZ26 | E-Value: 1.878e-105, PID: 30.79 | (Inter-alpha-trypsin inhibitor heavy chain like {E... [more] |
| A0A7J7H5S8 | E-Value: 2.121e-105, PID: 32.51 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5948... [more] |
| A0A2R6QXC7 | E-Value: 8.271e-98, PID: 30.83 | (Protein EMBRYONIC FLOWER like {ECO:0000313|EMBL:P... [more] |
| A0A5B7BEG1 | E-Value: 1.682e-97, PID: 37.94 | (Uncharacterized protein {ECO:0000313|EMBL:MPA6605... [more] |
| A0A2I4DND7 | E-Value: 5.797e-94, PID: 28.84 | (uncharacterized protein LOC108981852 isoform X1 {... [more] |
| A0A061DKK8 | E-Value: 7.162e-91, PID: 27.73 | (Uncharacterized protein isoform 1 {ECO:0000313|EM... [more] |
| A0A2I4DNE2 | E-Value: 1.707e-89, PID: 28.62 | (uncharacterized protein LOC108981852 isoform X2 {... [more] |
| A0A6J0ZH78 | E-Value: 1.591e-88, PID: 27.76 | (uncharacterized protein LOC110409142 {ECO:0000313... [more] |
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |
