XM_017402963.1

Resource Type: 
Polypeptide
Name: 
XM_017402963.1
Identifier: 
XM_017402963.1-protein
Sequence: 
MSKASIQQQQQQDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSP
NFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFS
RSLALDHGEIQLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGKCSSN
GNGFCNDSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHHNRSCSGSVAL
PGGNGSTVSPNKPPLGKHSRVDSTRKSLSGNCISFVVRESGGGERARVME
GEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGR
QLTMEEFEMCVGHSPIVQELMRRQNVEDGNDKNNSDYNGNGDGAKLKKKG
SWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHG
PERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGED
CVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQL
EKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWS
KSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISG
SLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLY
NTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIR
VVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADS
RPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDD
HPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDR
IATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRT
FQNFGMPVCI
Sequence Length: 
910
Sequence Checksum: 
1780b8336d2249197d48f26d2b7f11c2
View location in JBrowse: 
DCARv2_Chr6:26825115..26831574-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402963.1, derives from mRNA, XM_017402963.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HCY2 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5949718.1}))

HSP 1 Score: 1165.98 bits (3015), Expect = 0.000e+0
Identity = 634/937 (67.66%), Postives = 724/937 (77.27%), Query Frame = 0
 
Query:    1 MSKASIQQQQQ-QDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSPNFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR---SLALDH---GEI---QLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGKCSSNGNGFCNDSVCCLPEILCIDSS--VVVGNDLGCCHGTVVNKH---HNRSCSGSVALPGGNGSTVSPNKPPLGKHSR------VDSTRKSLSGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGNDKNNSDYNGNGDG---AKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKK--RSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            M K S+ Q    +D +CF+DSLDRI SS++SS S S  E+E D    ++S + +PNYA   +FPMG+ +NYD+WIS+PSSV+ERR +LLR +GL+RD   SR   SL+ D    G +    ++ D +    Q     +++ N  ++RSKSD +    S +       S  C P+IL I+S+   V   D     G  VN H    ++S +G + L  G     SPNKPP GK+SR      +DST  +L+ N  S  V  + G       E + DL C+ I  V  P CTIKNLDTGKEFVVNEVR DG W K+KEV TG+QLTMEEFEMCVGHSPIVQELMRRQNVEDG+ K+N D N  G G   +K KKKGSWLKSIKNVASS+TG KERRSSD+RDT+SE+GGRRSSSATDDSQ+V+FHGPER+RVRQYGKSCKE+T LYKSQEI AH GSIWTIKFSL+GKYLASAGEDCVIH+W+V ESERKGDLL+DK EDGNL++  + N SPEP S SPN  S  EKKRRGRSSISRKSVSLDH+ VPETVFALSEKP CSF+GHLDDVLDLSWSKSQHLLSSSMDKTVRLWHL+ KSCLK FSHSDYVTCIQFNPVDD +FISGSLDAKVRIW+I DRQVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSCRLYNTS+NKLQQK QINL NKKKK   +KITGFQFAPGS SEV ITSADSRIRV+DGVDLVHKFKGFRNTNSQISASLTAN KYV+CASEDSHVYIWKHE DSRPS+SKGV VT+SYEHFHCQDVS AIPWPGM D WG QD  +       DH +E S AN+PPTPVE+ N  E SPLA+GC+SSP HGTISSATNSYFFDRI ATWPEEKL+LA+      P VSVDF+NG++Q RSAWGMVIVTA LRGEIRTFQNFG+PV I
Sbjct:    1 MIKPSLNQHHNNKDCDCFYDSLDRIFSSSSSSSSSSPPEDERDRDPNSNSISDSPNYAPNPRFPMGLSNNYDIWISEPSSVEERRIQLLRQMGLSRDPILSRQIPSLSADFDAGGGVFGRSVSADHLIRTQQRAQISSSNFNPGVVRSKSDTE---ASPHDQCNSISSSICSPQILSINSTSPPVFKPD-----GPFVNNHTVVKSQSGNGLLGLNAG-----SPNKPPTGKNSRRVEEIRIDSTSSNLNFNSSSSPVLGNSGDR-----ELDDDLGCNGIVEVDGPVCTIKNLDTGKEFVVNEVREDGMWNKLKEVGTGKQLTMEEFEMCVGHSPIVQELMRRQNVEDGH-KDNVDPNAKGSGGIGSKSKKKGSWLKSIKNVASSMTGHKERRSSDERDTSSEKGGRRSSSATDDSQDVTFHGPERVRVRQYGKSCKELTALYKSQEIQAHNGSIWTIKFSLDGKYLASAGEDCVIHVWQVVESERKGDLLIDKPEDGNLNIFFVANGSPEPISLSPNLDSLPEKKRRGRSSISRKSVSLDHIMVPETVFALSEKPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSGKSCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQQKAQINLQNKKKKSHQKKITGFQFAPGSSSEVHITSADSRIRVIDGVDLVHKFKGFRNTNSQISASLTANAKYVLCASEDSHVYIWKHEGDSRPSRSKGVTVTQSYEHFHCQDVSVAIPWPGMCDAWGFQDAQA-------DHLDEVSTANHPPTPVEEFNDDEKSPLASGCSSSPLHGTISSATNSYFFDRISATWPEEKLVLASNNVGSPPRVSVDFTNGISQSRSAWGMVIVTASLRGEIRTFQNFGLPVRI 911
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BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B0D0 ((Putative WD repeat-containing protein 44-like isoform X2 {ECO:0000313|EMBL:MPA61935.1}))

HSP 1 Score: 1161.75 bits (3004), Expect = 0.000e+0
Identity = 639/928 (68.86%), Postives = 718/928 (77.37%), Query Frame = 0
 
Query:   16 CFHDSLDRILSSTNSSCSPSSSEEEE-DEHDVAHSPNFNPNYAQK-SKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR--------------SLALDHGEI--QLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGK-CSSNGNGFCN-DSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHHNRSCSGSVALPGGNGS----TVSPNKPPLGKHSRV------DSTRKSLSGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGNDKN-NSDYNGNG-DGAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            CF++SLDRILSST+S  S S+ +++E D +  + SPN+ PN      +FPMGV +NYDVWIS+PSSV+ERR RLLR +GL+RD   SR                 L  GE    +++D ++   Q      +  N  + RSKSDG T   C+S+ +  CN +S  C P+IL I+S     N+ G   G  VN H+       V L   NGS     VSPNKPP GK+ R       DST   LS NC S  V  +     A   E + D  C+ I  VSDP CTIKNLD GKEFVVNEVR DG W K+KEV TGRQLTMEEFEMC+GHSPIVQEL+RRQNVEDGN  N +S+ NG+G  G+KLKKKGSWLKSI+NVAS++TG KERRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPERIRVRQYGKS KE+T LYKSQEI AH GSIW IKFSL+GKYLASAGED VIH+ +V E+ERKGDLL DK EDGNL+LL+L N SPEP S SP   +  EKKRRGRSSISRKSVS+DHV VPETVFALSEKP CSF+GHLDDVLDLSWSKSQHLLSSSMDKTVRLWHL+SK+CLK FSHSDYVTCIQFNPVDD++FISGSLDAKVRIW+I D QVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSCRLYNTS+NKLQQK+QINL NKKKK  H+KITGFQFAPGS SEVLITSADSRIRV+D VDLVHKFKGFRNTNSQISASLTANGKYVVCASEDS+VY+WKHE DSRPS+SKG+ VTRSYEHFHCQDVSAAIPW GM D              LD    E S AN+PPTPVE+ N  ESSPLA+GCTSSP HGTISSATNSYFFDRI ATWPEEKLLLA K RSPH SVDFS+G+NQ RSAWGMVIVTAGLRGEIRTFQNFG+PV I
Sbjct:   13 CFYESLDRILSSTSSCSSSSAEDDDEKDPNSNSDSPNYAPNRPLPIPRFPMGVSNNYDVWISEPSSVEERRMRLLRQMGLSRDPSLSRQKPSHLAASDQGGSGGGLCRGEFGRSVSSDHLNRSQQRGEVSCSESNPGIQRSKSDGATDHHCNSSSHDQCNSNSSVCSPQILSINSISPSVNETG---GPFVNNHN-----VVVKLRSANGSPITNAVSPNKPPSGKNCRRVEEIRNDSTSLHLSVNCNSLPVLGN-----ASSGEFDDDSGCNGIVRVSDPVCTIKNLDNGKEFVVNEVREDGMWNKLKEVGTGRQLTMEEFEMCLGHSPIVQELLRRQNVEDGNKDNVDSNVNGSGGSGSKLKKKGSWLKSIRNVASTMTGHKERRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERIRVRQYGKSSKELTALYKSQEIQAHNGSIWIIKFSLDGKYLASAGEDRVIHVRQVVEAERKGDLL-DKLEDGNLNLLILANGSPEPISMSPK-DNHPEKKRRGRSSISRKSVSIDHVAVPETVFALSEKPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKTCLKIFSHSDYVTCIQFNPVDDSYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQQKSQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVIDCVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSYVYVWKHEGDSRPSRSKGITVTRSYEHFHCQDVSAAIPWLGMCD-------------DLD----EVSTANHPPTPVEEMNGSESSPLASGCTSSPLHGTISSATNSYFFDRISATWPEEKLLLATKNRSPHSSVDFSSGMNQSRSAWGMVIVTAGLRGEIRTFQNFGLPVRI 908
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BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QWT5 ((WD repeat-containing protein {ECO:0000313|EMBL:PSS16200.1}))

HSP 1 Score: 1149.42 bits (2972), Expect = 0.000e+0
Identity = 623/925 (67.35%), Postives = 714/925 (77.19%), Query Frame = 0
 
Query:    1 MSKASIQQQQQQDEECFHDSLDRILSSTNSSCSPSSSE--EEEDEHDVAHSPNFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR---SLALDHGEIQLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTG---KCSSNGNGFCNDSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHHNRSCSGSVALPGGNGSTVSPNKPPLGKH-SRVDSTRKSLSGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGN-DKNNSDYNGNG-DGAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVE---DANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            MSKA   + ++ ++ECF++SLDR++SS  SSCS SS+E  EE D +  + SPNF PN          + ++YDVWIS+PSSV++RR RLLR +GL+RD   SR   SL+  HG    + D +   N         C   ++RSKSDG      +C+S+ + F   ++        ++ S    N     H +VVN   +RS +GS            PNKPP GK   RV+  R        +  V  +  GE   V       DC+ I  V+   CTIKNLD GKEFVVNEVR DG W K+KEV TGRQLTMEEFE+CVGHSPIVQELMRRQNVEDGN D  +SD +G+G  G+KLKKKGSWLKSIK+VAS++T  KERRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPER+RVRQYGKS KE+T LYKSQEI  H GSIWTIKFSL+G+YLASAGEDCVIH+W+V +S+RKGDLL+DK EDGNL+LL +TN SPEP S SPN  S  EKKRRGRSSISRKSV ++ + VPET+FALSEKPFCSFEGHL+DVLDLSWSKS+HLLSSSMDKTVRLWHL+SKSCLK FSHSDYVTCIQFNPVD+ +FISGSLDAKVRIW+I DR VVDW+DLHEMVTAACYTPDGQ+ALVGSYKGSCRLYNTS+NKLQQK QINL NKKKK  H+KITGFQFAP S SEVL+TSADSRIRVVDG DLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVY+WKHE DSRP++SKGV VTRSYEHFHCQDVS AIPWPGM D WG  D  SGE N L DH +E S AN+PP+PVE   D N  ESSP+ATGC+SSP HGTISSATNSYFFDRI ATWPEEKL+LAAK RSP VSVDFSN +NQ R AWGMVIVTAGLRGEIRTFQNFG+PV I
Sbjct:    1 MSKA---RDEEDEDECFYESLDRLVSSATSSCSSSSAEDDEERDPNSNSDSPNFAPNN-------QSLWNSYDVWISEPSSVEDRRMRLLRQMGLSRDPVLSRQTPSLSSAHGGRSASADQLSGGN---------CGPGIVRSKSDGGASVHDQCNSDSSVFSPRNLSGNSISQSVNESE--ENSFVNNHSSVVN---SRSDNGS------------PNKPPAGKICRRVEEIRSDSISTSSNSNVNYNSSGELIHVS------DCNGIVGVNGLVCTIKNLDNGKEFVVNEVREDGMWNKLKEVGTGRQLTMEEFEICVGHSPIVQELMRRQNVEDGNKDSVDSDVHGSGGSGSKLKKKGSWLKSIKSVASTMTSYKERRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERVRVRQYGKSYKELTALYKSQEIQGHNGSIWTIKFSLDGRYLASAGEDCVIHVWQVEKSQRKGDLLMDKLEDGNLNLLFVTNGSPEPTSMSPNLESHPEKKRRGRSSISRKSVCIEQILVPETLFALSEKPFCSFEGHLNDVLDLSWSKSEHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDEKYFISGSLDAKVRIWSIPDRLVVDWNDLHEMVTAACYTPDGQSALVGSYKGSCRLYNTSENKLQQKDQINLQNKKKKCHHKKITGFQFAPESSSEVLVTSADSRIRVVDGTDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYVWKHEGDSRPNRSKGVTVTRSYEHFHCQDVSVAIPWPGMCDPWGFHDTLSGEQNQLHDHLDEVSTANHPPSPVEEIIDGN--ESSPMATGCSSSPLHGTISSATNSYFFDRISATWPEEKLILAAKNRSPRVSVDFSNALNQNRPAWGMVIVTAGLRGEIRTFQNFGLPVRI 881
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BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A0P4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8523869.1}))

HSP 1 Score: 1142.87 bits (2955), Expect = 0.000e+0
Identity = 638/950 (67.16%), Postives = 728/950 (76.63%), Query Frame = 0
 
Query:    1 MSKASIQQQQQQDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSPNFN---PNYAQK-----SKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR-------------SLALDHGEI--QLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGK-CSSNGNGFCN-DSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHH----NRSCSGSVALPGGNGSTVSPNKPPLGKHSRV------DSTRKSL--SGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDG-NDKNNSDYNGNGD-GAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            MSKA     ++ ++ECF++SLDRILSST+S  S S+  E++DE D    PN N   PNYA        +FPMGV +NYD+WIS+PSSV+ERR RLLR +GL+RD   SR             S  L  GE    +++D ++   Q D     + N  +L   SDG T   C+S+ +  CN +S    P+IL I+S     N+ G   G  V+ H+    +RS +GS+       +T S NKPP GK+ R       DST  +L  +GN +  +   SGG       E E D  C+ I   SDP CTIKNLD GKEFVVNEVR DG W K+KEV TGRQLTMEEFE+C+GHSPIVQELMRRQNVEDG ND  +S+ NG+G  G+KLKKKGSWL+SIKNVAS++TG KERRSSD+RDT+SE+GGRRSSSATDDSQ+VSFH PERIRVRQYGKSCKE+T LYKSQEI AH+GSIWTIKFSL+GKYLA+AGEDCVI +W+V ESERKGDLL+DKSEDGNL+LL+L N SPEP S SPN  S LEKKR+GRSSISRKSVS+DHV VPETVFALSEKP CSF+GHLDDVLDLSWSKSQ LLSSSMDKTVRLWHL+SKSCLK FSHSDYVTCIQFNPVDD +FISGSLDAKVRIW+I DRQVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSCRLYNTS+NKLQ K+QINL NKKKK  H+KITGFQFAPGS SEVLITSADSRIRV+D VDLVHKFKGFRN NSQISASLTANGKYV+CASEDSHVY+WKHE DSRPSKSKG+ VTRSYEHFH QDVS AIPWPGM         C        D+ +E S  N+PPTPVE+ N  ESSPLA+GCTSSPFHGTISSAT+SYFFDRI ATWPEEKL L+ K  SP  SVDFS G+N  RSAWGMVIVTAGLRGEIRT+QNFG+PV I
Sbjct:    1 MSKAG---DEEDEDECFYESLDRILSSTSSCSSSSA--EDDDEKD----PNSNSDSPNYASNRPLPIPRFPMGVSNNYDMWISEPSSVEERRLRLLRQMGLSRDPSLSRQKPFLLSSSEAGGSGGLCRGEFGRSVSSDHLNRSQQRDEVSYNNSNPGILWPDSDGATDHHCNSSSHDQCNFNSSVFSPQILSINSISPSVNETG---GPFVHNHNVVITSRSDNGSLIT-----NTASLNKPPTGKNCRRVEEIRDDSTSSNLHVNGNSLPVLGNASGG-------ELEDDSGCNGIVRASDPVCTIKNLDNGKEFVVNEVREDGMWNKLKEVGTGRQLTMEEFEICLGHSPIVQELMRRQNVEDGTNDNVDSNVNGSGSSGSKLKKKGSWLRSIKNVASTMTGLKERRSSDERDTSSEKGGRRSSSATDDSQDVSFHCPERIRVRQYGKSCKELTALYKSQEIQAHSGSIWTIKFSLDGKYLATAGEDCVIQVWQVVESERKGDLLMDKSEDGNLNLLILANGSPEPTSMSPNLDSHLEKKRKGRSSISRKSVSVDHVVVPETVFALSEKPICSFQGHLDDVLDLSWSKSQQLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQPKSQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVIDDVDLVHKFKGFRNPNSQISASLTANGKYVICASEDSHVYVWKHEVDSRPSKSKGITVTRSYEHFHSQDVSVAIPWPGM---------C--------DYLDEVSTTNHPPTPVEETNGSESSPLASGCTSSPFHGTISSATDSYFFDRISATWPEEKLPLSTKNPSPRSSVDFSVGINDSRSAWGMVIVTAGLRGEIRTYQNFGLPVRI 909
[Close]
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EU06 ((Uncharacterized protein {ECO:0000313|EMBL:THG20390.1}))

HSP 1 Score: 1139.02 bits (2945), Expect = 0.000e+0
Identity = 630/970 (64.95%), Postives = 716/970 (73.81%), Query Frame = 0
 
Query:    1 MSKASIQQQQQ-QDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSPNFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR---SLALDH---GEI---QLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGKCSSNGNGFCNDSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHHNRSCSGSVALPGGNGSTVSPNKPPLGKHSR------VDSTRKSLSGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGNDKNNSDYNGNGDG---AKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKS--------------------------------------QHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKK--RSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            M K S+ Q    +D +CF+DSLDRI SS++SS S S  E+E D    ++S + +PNYA   +FPMG+ +NYD+WIS+PSSV+ERR +LLR +GL+RD   SR   SL+ D    G +    ++ D +    Q     +++ N  ++RSKSD +    S +       S  C P+IL I+S+      +    G  VN H          L G N    SPNKPP GK+SR      +DST  +L+ N  S  V  + G       E + D  C+ I  V  P CTIKNLDTGKEFVVNEVR DG W K+KEV TG+QLTMEEFEMCVGHSPIVQELMRRQNVEDG+ K+N D N  G G   +K KKKGSWLKSIKNVASS+TG KERRSSD+RDT+SE+GGRRSSSATDDSQ+V+FHGPER+RVRQYGKSCKE+T LYKSQEI AH GSIWTIKFSL+GKYLASAGEDCVIH+W+V ESERKGDLL+DK EDGNL++  + N SPEP S SPN  S  EKKRRGRSSISRKSVSLDH+ VPETVFALSEKP CSF+GHLDDVLDLSWSKS                                      QHLLSSSMDKTVRLWHL+ KSCLK FSHSDYVTCIQFNPVDD +FISGSLDAKVRIW+I DRQVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSCRLYNTS+NKLQQK QINL NKKKK   +KITGFQFAPGS SEV ITSADSRIRV+DGVDLVHKFKGFRNTNSQISASLTAN KYV+CASEDSHVYIWKHE DSRPS+SKGV VT+SYEHFHCQDVS AIPWPGM D WG QD  +       DH +E S AN+PPTPVE+ N  E SPLA+GC+SSP HGTISSATNSYFFDRI ATWPEEKL+LA+      P VSVDF+NG +Q RSAWGMVIVTA LRGEIRTFQNFG+PV I
Sbjct:    1 MIKPSLNQHHNNKDCDCFYDSLDRIFSSSSSSSSSSPPEDERDRDPNSNSISDSPNYAPNPRFPMGLSNNYDIWISEPSSVEERRIQLLRQMGLSRDPILSRQIPSLSADFDAGGGVFGRSVSADHLIRTQQRAQISSSNFNPGVVRSKSDTE---ASPHDQCNSISSSICSPQILSINST---SPPVFKPEGPFVNNHSVVKSQNGNGLLGLNAG--SPNKPPTGKNSRRVEEIRIDSTSSNLNFNSSSSPVLGNSGDR-----ELDDDSGCNGIVEVDGPVCTIKNLDTGKEFVVNEVREDGMWNKLKEVGTGKQLTMEEFEMCVGHSPIVQELMRRQNVEDGH-KDNVDPNAKGSGGIGSKSKKKGSWLKSIKNVASSMTGHKERRSSDERDTSSEKGGRRSSSATDDSQDVTFHGPERVRVRQYGKSCKELTALYKSQEIQAHNGSIWTIKFSLDGKYLASAGEDCVIHVWQVVESERKGDLLIDKPEDGNLNIFFVANGSPEPISLSPNLDSLPEKKRRGRSSISRKSVSLDHIMVPETVFALSEKPICSFQGHLDDVLDLSWSKSQMDICILVKQLSFLWITGSGFWLVQYVINASYYQKFYFQHLLSSSMDKTVRLWHLSGKSCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQQKAQINLQNKKKKSHQKKITGFQFAPGSSSEVHITSADSRIRVIDGVDLVHKFKGFRNTNSQISASLTANAKYVLCASEDSHVYIWKHEGDSRPSRSKGVTVTQSYEHFHCQDVSVAIPWPGMCDAWGFQDAQT-------DHLDEVSTANHPPTPVEEFN-DEKSPLASGCSSSPLHGTISSATNSYFFDRISATWPEEKLVLASNNPGSPPRVSVDFTNGTSQSRSAWGMVIVTASLRGEIRTFQNFGLPVRI 948
[Close]
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4H4K7 ((WD repeat-containing protein 44-like {ECO:0000313|RefSeq:XP_018851091.1}))

HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0
Identity = 604/911 (66.30%), Postives = 698/911 (76.62%), Query Frame = 0
 
Query:   13 DEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSPNFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR-SLALDHGEIQLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGKCSSNGNGFCNDSVCCLPEILCIDSSVVVGND---LGCCHGTVVNKHHNRSCSGSVALPGGNGSTVSPNKPPLGKHS--RVDSTRKSLS-GNCISFVVRESG-GGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGNDKNNSDYNGNG---DGAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKR-SPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            D EC+++SLDRI+SS+ S  + +S  +E D    + SPN    +    KFPMG  + YDVWISQPSSV ERRSRLLR +GL+ D   SR   A D G       DI     +D     S  + M+RSKSDG   +           +  C P +L   S  +V N+     C H  +V      S        G + +  SPNKPP+GK S  +VD  R + + G  ++F     G GGE    +E EG LDC+ +G  S+  C IKNLD GKEFVVNE+R DG+W K+KEV TGRQLTMEEFEM VGHSPIVQELMRRQNVE+GN K++SD N NG    GAK+KKKGSW KSI++VASSVTG+KERRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPER++VRQYGKSCKE+T LYKSQEI AH GSIW+IKFSL+GKYLASAGEDCVIH+W+V ES+RKGDLL+DK +DGN+SL  + N SPEP   SP+  +  EKKRRGRSS+SRKS+SLDHV VPETVF+LSEKP CSF GHLDDVLDLSWSKSQHLLSSSMDKTVRLWHL+S+SCLK FSH+DYVTCIQFNPVDD +FISGSLDAKVRIW+I DRQVVDW+D+HEMVTAACYTPDGQ ALVGSYKGSC LYNTS+NKLQ   QINL NKKKK  H+KITGFQFAPGS SEVLITSADSRIRVVD VDL+ KFKGFRN NSQISASLT+NGKYVV ASEDS V++WKHEADSRP++SK V VT SYEHFHCQDVSAAIPWPG+GD WGLQD    E NGLD++ +E S AN+PPTPVE+ N    S  A+G ++SP HGTISSATNSYFFDRI ATWPEEKLL+  + R SP VSVDF NGVNQ  SAWG+VI+TAGLRGEIRTFQNFG+PV I
Sbjct:   21 DNECYYESLDRIVSSSCSCSNSNSDNDENDTVSFSASPN----HGSVPKFPMGTSNKYDVWISQPSSVSERRSRLLRQMGLSNDPSLSRDKPARDFGF----GGDIGRSVSSDRLTNHSGASTMVRSKSDGSDRQFDVRPTS----TSACAPPVLSTPSVSLVNNNDDSYKCNHAVLVKARSGNS-------DGESRAAASPNKPPIGKSSSKKVDEIRGNFTVGLDVNFDSNAGGSGGE----VEVEG-LDCNGVGRESEKVCLIKNLDNGKEFVVNEIREDGTWNKLKEVGTGRQLTMEEFEMSVGHSPIVQELMRRQNVEEGN-KDSSDSNANGVDGSGAKMKKKGSWFKSIRSVASSVTGQKERRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERVKVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESDRKGDLLMDKPDDGNMSLFFVANGSPEPTLLSPSMDNHPEKKRRGRSSMSRKSLSLDHVVVPETVFSLSEKPICSFRGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSESCLKIFSHNDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDVHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQLNVQINLQNKKKKSNHKKITGFQFAPGSSSEVLITSADSRIRVVDSVDLIRKFKGFRNQNSQISASLTSNGKYVVSASEDSCVFVWKHEADSRPNRSKCVTVTHSYEHFHCQDVSAAIPWPGLGDSWGLQDNYCREQNGLDNNLDEVSTANHPPTPVEEIN--GGSQSASGFSNSPLHGTISSATNSYFFDRISATWPEEKLLVPTRNRSSPRVSVDFFNGVNQNVSAWGLVIITAGLRGEIRTFQNFGLPVRI 904
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BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QDW6 ((WD repeat-containing protein {ECO:0000313|EMBL:PSS06321.1}))

HSP 1 Score: 1123.61 bits (2905), Expect = 0.000e+0
Identity = 621/928 (66.92%), Postives = 712/928 (76.72%), Query Frame = 0
 
Query:    1 MSKASIQQQQQQDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDV--AHSPNFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSR---SLALDHGEIQLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDT---GKCSSNGNGFCNDSVCCLPEILC---IDSSVVVG--NDLGCCHGTVVNKHHNRSCSGSVALPGGNGSTVSPNKPPLGKH-SRVDSTRKSLSGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGN-DKNNSDYNGNGDGA-KLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVED-ANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            MSKA     ++ ++E F++SLDR++SST SSCS SS+E+++D+     +HSPNF PN          + ++YDVWIS+PSSV++RR RLLR +GL+RD   SR   SL+  HG    + D +   N         C   ++RSKSDG      +C+S+ + F        P IL    I  SV     N     H +VVN   +RS +GS            PNKPP GK   RV+  R        +  V  +  GE   V       DC+ +  V+  ACTIKNLD GKEFVVNEVR DG W K KEV T RQLTMEEFE+CVGHSPIVQELMRRQNVEDGN D  +SD N +G  A KLKKKGSWLKSIK+VA ++TG KERRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPER+RVRQ GKS KE+T LYKSQEI AH GSIWTIKFSL+G+YLASAGEDCVIH+W+V ES+RKGDLL+DK EDGNL++L + N SPEP S SPN  S+LEKKRRGRSSISRKS+SL+ + VPET+FALSEKPFCSFEGHL+DVLDLSWSKSQ LLSSSMDKTVRLW+L+SKSCLK FSHSDYVTCIQFNPVDD +FISGSLDAKVRIW+I DR VVDW+DL+EMVTAACY PDGQ+ALVGSYKGSCRLYNTS+NKLQQK QINL NKKKK  H+KITGFQFAPGS SEVL+TSADSRIRVVDG DLVHKFKGFRN NSQISASLTANGKYVVCASEDSHVY+WKHEADSRP++SKGV VTRSYEHFHCQDVS AIPWPGM D WG  D  SGE N L DH +E   AN+PPTPVE+  N  ESSP+ATG ++SP HGTIS+A+NSYFFDRI ATWPEEKL+LAAK RSP VSVDFSNG+NQ   AWGMVIVTAGLRGEIRTFQNFG+PV I
Sbjct:    1 MSKAG---DEEDEDERFYESLDRLVSSTTSSCSSSSAEDDDDDERDPNSHSPNFAPNNP-------SLWNSYDVWISEPSSVEDRRMRLLRQMGLSRDPVLSRQTPSLSSAHGGRSASADQLCGGN---------CVPGIVRSKSDGGASVHAQCNSDSSVFS-------PRILSGNSISQSVNQSEENSFVNNHSSVVN---SRSDNGS------------PNKPPTGKICRRVEEIRNDSVSTSSNLNVNCNSSGELNHVS------DCNGVVGVNGLACTIKNLDNGKEFVVNEVREDGMWNKFKEVGTERQLTMEEFEICVGHSPIVQELMRRQNVEDGNKDSVDSDVNESGGSASKLKKKGSWLKSIKSVAGTMTGYKERRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERVRVRQCGKSSKELTALYKSQEIQAHNGSIWTIKFSLDGRYLASAGEDCVIHVWQVVESQRKGDLLMDKQEDGNLNILFVANGSPEPTSLSPNLESRLEKKRRGRSSISRKSMSLEQILVPETLFALSEKPFCSFEGHLNDVLDLSWSKSQ-LLSSSMDKTVRLWNLSSKSCLKIFSHSDYVTCIQFNPVDDKYFISGSLDAKVRIWSIPDRLVVDWNDLNEMVTAACYAPDGQSALVGSYKGSCRLYNTSENKLQQKDQINLQNKKKKFHHKKITGFQFAPGSSSEVLVTSADSRIRVVDGTDLVHKFKGFRNPNSQISASLTANGKYVVCASEDSHVYVWKHEADSRPNRSKGVTVTRSYEHFHCQDVSVAIPWPGMCDSWGFHDTFSGEQNQLHDHLDEVPTANHPPTPVEEIINSNESSPMATGYSNSPLHGTISTASNSYFFDRISATWPEEKLILAAKNRSPRVSVDFSNGLNQNTPAWGMVIVTAGLRGEIRTFQNFGLPVRI 880
[Close]
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AC58 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526851.1}))

HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0
Identity = 586/777 (75.42%), Postives = 647/777 (83.27%), Query Frame = 0
 
Query:  147 CSSNGNGFCN-DSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHHN--RSCSGSVALPGGNGSTVSPNKPPLGKHSRV------DSTRKSLSGNCISF-VVRESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGN-DKNNSDYNGNGD-GAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            C+S+ +  CN +S     +IL I+S     N+ G   G+ VN H+   +S SGS   P  N    SPNKPP GK+SR       DS    LS NC S  V+  + GGE       + D  C  I SVSDP CTIKNLD GKEFVVNEVR DG W K+KEV TGRQLTMEEFEMC+GHSPIVQEL+RRQNVEDGN D  +S+ NG+G  G+KLKKKGSWLKSI+NVAS++TG KERRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPERIRVRQYGKSCKE+T LYKSQEI AH GSIWTIKFSL+GKYLASAGED VIH+ +V ESERKGDLL+DK EDGNL+LL+  N SPEPNS SPN  S  EKKRRGRSSISRKSVS+DHV VPETVFALSEKP CSF+GHLDDVLDLSWSKSQHLLSSSMDKTVRLW+L+SKSCLK FSHSDYVTCIQFNPVDD +FISGSLDAKVRIW+I +RQVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSC LYNTS+NKLQQK+QINL NKKKK  H+KITGFQFAPGS SEVLITSADSRIRV+D ++LVHKFKGFRNTNSQISASLTANGKYVVCASEDS+VY+WKHE DSRPS+SKG+ VTRSYEHFHCQDVS AIPWPGM D WGLQD CSGE NG+ DH +E S AN+PPTPVE+ N  ESSPLA+ C SSP HGTISSATNSYFFDRI ATWPEEKLLLA K RSP  SVDFS+G+NQ RSAWGMVIVTAGLRGEIRTFQNFG+PV I
Sbjct:    7 CNSSSHDHCNSNSSVYSSQILSINSISPSVNEAG---GSFVNNHNVDVKSRSGS---PITN--VASPNKPPTGKNSRRVEEIRNDSKSMHLSFNCNSLPVLGNATGGEL------DDDSGCYGIVSVSDPVCTIKNLDNGKEFVVNEVRDDGMWNKLKEVGTGRQLTMEEFEMCLGHSPIVQELLRRQNVEDGNKDNAHSNVNGSGSSGSKLKKKGSWLKSIRNVASTMTGHKERRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERIRVRQYGKSCKELTALYKSQEIQAHNGSIWTIKFSLDGKYLASAGEDRVIHVRQVVESERKGDLLMDKLEDGNLNLLI-ANGSPEPNSMSPNLDSNPEKKRRGRSSISRKSVSMDHVVVPETVFALSEKPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWNLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPERQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSHHKKITGFQFAPGSTSEVLITSADSRIRVIDWIELVHKFKGFRNTNSQISASLTANGKYVVCASEDSYVYVWKHEGDSRPSRSKGITVTRSYEHFHCQDVSVAIPWPGMCDEWGLQDACSGEQNGIGDHLDEVSTANHPPTPVEEINGSESSPLASVCNSSPLHGTISSATNSYFFDRISATWPEEKLLLATKNRSPRSSVDFSSGMNQSRSAWGMVIVTAGLRGEIRTFQNFGLPVRI 768
[Close]
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DWK9 ((Uncharacterized protein {ECO:0000313|EMBL:THG07730.1}))

HSP 1 Score: 1106.28 bits (2860), Expect = 0.000e+0
Identity = 628/995 (63.12%), Postives = 723/995 (72.66%), Query Frame = 0
 
Query:    1 MSKASIQQQQQQDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSPNFNPNYAQK------SKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARDSKFSRSLALDHGEIQ-------LNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDT-------GKCSSNGNGFCNDSVCCLPEILCIDSSVV---VGNDLGCCHGTVVNKHHNRSCSGSVALPGGNGSTV-----SPNKPPLGKHSRV------DSTRKSLSGNCISFVV--RESGGGERARVMEGEGDLDCDLIGSVSDPACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGN-DKNNSDYNGNG-DGAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHL-------LSSS------------------MDKTVRLWHLT----SKSCLKTFSHSD-----------------YVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            MSKA     ++ ++ECF++SLDRILSS+NSSCS SS+E+ +D+     S + +PNYA         +FPMGV +NYDVWIS+PSSV++RR RLLR +GL+RD   SR  A D G          ++ D ++   Q      +  N  ++RSKSDG T        +C+SN       S    P+IL I+++ +   V N++G   G  VN  +NRS    V  P GNGS V     S NKPP  K+ R       DST  +  GNC S  V    SGGGE       +GD  C+ IG    P CTIKNLDTGKEFVVNEVR DG+W K+KEV TGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGN D  +S+ NG+G  G+K KKKGSWLKSI+NVAS++TG K+RRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPER+RVRQYGKSCKE+T LYKSQEI AH+GSIWTIKFSL+GKYLASAGEDCVIH+W+V E+ERKGDLL+DK  DGN +LL   N SPEP S SPN  +  EKKRRGRSS SRKSVSLD + VPETVFALSEKP CSF+GHL+DVLDLSWSKSQ         +SS+                  + K++   HL+     K+ L  + +S+                 YVTCIQFNPVDD FFISGSLDAKVRIW+I DRQVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSC LYNTS+NKLQQK QINL NKKKK  H+KITGFQFAPGS SEVLITSADSRIRV++GVDLVHKFKGFRNTNSQISASLTANG YVV ASEDSHVY+WKHE DS+PS+SKGV VTRSYEHFHCQDVS AIPWPGM D WG QD  SGE + L D  +E S AN+PPTPVE+ N  ES+ LA  C +SP HGTISSATNSYFFDRI ATWPEEKLLL AK  SP VSVDFSN +NQ RSAWGMVIVTAGLRGEIRTFQNFG+PV I
Sbjct:    1 MSKAG---DEEDEDECFYESLDRILSSSNSSCSSSSAEDYDDDDKDQKSISDSPNYASDRPPLPIPRFPMGVSNNYDVWISEPSSVEDRRMRLLRQMGLSRDPILSRQRASDEGGTSRGDFGRSVSADQLNRSQQRGDISCSDSNPGIVRSKSDGATDHHHRIKSQCNSN-------SPLHSPQILLINNNSISPPVVNEIG---GPFVN--NNRSV---VKSPSGNGSPVINAAASLNKPPTSKNCRRVEDNMNDSTSLNPGGNCNSMSVSGNASGGGEL------DGDSGCNGIG----PVCTIKNLDTGKEFVVNEVREDGTWNKLKEVGTGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGNRDDVDSNANGSGGSGSKFKKKGSWLKSIRNVASTMTGYKDRRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERVRVRQYGKSCKEITALYKSQEIRAHSGSIWTIKFSLDGKYLASAGEDCVIHVWQVVETERKGDLLIDKPVDGNSNLLFFANGSPEPTSVSPNLENHPEKKRRGRSSTSRKSVSLDQILVPETVFALSEKPICSFQGHLNDVLDLSWSKSQTAPLNCICSISSADQTRSVGSTPPALLDWLHLVKSLHQIHLSRAIRKKNYLAGYHNSETVFVALLHWQLSDELFPYVTCIQFNPVDDRFFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKGQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVIEGVDLVHKFKGFRNTNSQISASLTANGNYVVSASEDSHVYVWKHEGDSQPSRSKGVTVTRSYEHFHCQDVSMAIPWPGMCDSWGFQDRSSGEQSRLGDDVDEVSTANHPPTPVEEINGNESTLLACACPTSPLHGTISSATNSYFFDRISATWPEEKLLLTAKNHSPRVSVDFSNSINQSRSAWGMVIVTAGLRGEIRTFQNFGLPVRI 967
[Close]
BLAST of XM_017402963.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4FQ28 ((Full=PREDICTED: WD repeat-containing {ECO:0000313|EMBL:VVA29568.1}))

HSP 1 Score: 1105.51 bits (2858), Expect = 0.000e+0
Identity = 602/932 (64.59%), Postives = 703/932 (75.43%), Query Frame = 0
 
Query:    1 MSKASIQQQQQQDEECFHDSLDRILSSTNSSCSPSSSEEEEDEHDVAHSPNFNPNYAQKSKFPMGVLHNYDVWISQPSSVQERRSRLLRNLGLARD-------------SKFSRSLALDHGEIQLNNDDIHNDNQNDVRVAASCNAEMLRSKSDGDTGKCSSNGNGFCNDSVCCLPEILCIDSSVVVGNDLGCCHGTVVNKHHNRSCSGSVALPGGNGSTVSPNKPPLGKHSR-VDSTRKSLSGNCISFVVRESGGGERARVMEGEGDLDCDLIGSVSD-----PACTIKNLDTGKEFVVNEVRGDGSWEKVKEVATGRQLTMEEFEMCVGHSPIVQELMRRQNVEDGN-DKNNSDYNG-NGDGAKLKKKGSWLKSIKNVASSVTGRKERRSSDDRDTASERGGRRSSSATDDSQEVSFHGPERIRVRQYGKSCKEVTGLYKSQEILAHTGSIWTIKFSLNGKYLASAGEDCVIHIWKVGESERKGDLLLDKSEDGNLSLLLLTNDSPEPNSGSPNFGSQLEKKRRGRSSISRKSVSLDHVFVPETVFALSEKPFCSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKTFSHSDYVTCIQFNPVDDNFFISGSLDAKVRIWNISDRQVVDWSDLHEMVTAACYTPDGQAALVGSYKGSCRLYNTSDNKLQQKTQINLHNKKKKGRHRKITGFQFAPGSKSEVLITSADSRIRVVDGVDLVHKFKGFRNTNSQISASLTANGKYVVCASEDSHVYIWKHEADSRPSKSKGVNVTRSYEHFHCQDVSAAIPWPGMGDIWGLQDGCSGELNGLDDHPEEASLANNPPTPVEDANVIESSPLATGCTSSPFHGTISSATNSYFFDRI-ATWPEEKLLLAAKKRSPHVSVDFSNGVNQRRSAWGMVIVTAGLRGEIRTFQNFGMPVCI 910
            MSKA  + ++ +D ECF++SLDRI+SS+ S  + +S  + E +         NPNYA   KFPMG    YDVWIS+PSSV ERRS+LL  +GL  D               F RS++ D+   QL++                 N  ++RSKSDG  G   +N     + S   +  I C  +S     +     G+ VN++ +++C   +    G  ++  PNKPP GK+SR  D  R                    ++V E   +LDC+ I  V+D       CTI+NLD GKEFVVNE+R DG W K+KEV TG+QLTMEEFEM VGHSPIVQELMRRQNVE+G+ D   S+ NG NG  +KLKK+G W KSIK+VAS++TG ++RRSSD+RDT+SE+GGRRSSSATDDSQ+VSFHGPER+RVRQYGKSCKE+T +YKSQEI AH GSIW+IKFSL+GKYLASAGEDCVIH+WKV ESERKGDLL++KSED N +LL  +N SPEP+S SPN  + +EKKRRGRSSISRKSVSLDH  +PETVFALSEKP  SF+GHLDDVLDLSWSKSQHLLSSSMDKTVRLWHL++++CLK FSHSDYVTCIQFNPVDD +FISGSLDAKVRIW+I DRQVVDW+DLHEMVTAACYTPDGQ ALVGSYKGSCRLYNTS+NKLQQK+QINL NKKKK   +KITGFQFAPGS SEVLITSADSRIRVVD +DLVHKFKGFRN NSQISA+LTANGKYVV ASEDSHVYIWKHEADSRPS+SK V VTRSYEHFHC DVS AIPWPG+GD WGLQD    E NGLD++ +E S AN+PPTPVE AN  E S  A+GCT+SP HGTISSA+N+YFFDRI ATWPEEKLLLA + RSP VS DF+NG NQ  SAWGMVIVTAGLRGEIRTFQNFG+P+ I
Sbjct:    1 MSKA--RGEEDEDTECFYESLDRIVSSSCSCSTSNSGSDTESDP--------NPNYAVP-KFPMGASIKYDVWISEPSSVSERRSKLLSEMGLTGDPVLTRAKPHLGYAGDFGRSVSSDYLISQLSSG------------GGGVNG-IVRSKSDG--GDQCNNACSTSSISSPPILSIRC--ASGEAETEPEPETGSFVNRN-SKNCV--LKSSSGKSNSSPPNKPPSGKNSRRADEIRSD------------------SKVDE---ELDCNGIVKVTDGNGNAQVCTIRNLDNGKEFVVNEIREDGMWNKLKEVGTGKQLTMEEFEMSVGHSPIVQELMRRQNVEEGHKDGLESNANGGNGGVSKLKKRGGWFKSIKSVASTMTGHRDRRSSDERDTSSEKGGRRSSSATDDSQDVSFHGPERVRVRQYGKSCKELTAMYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWKVMESERKGDLLMEKSEDSNFNLLF-SNGSPEPSSVSPNVDNHVEKKRRGRSSISRKSVSLDHYVIPETVFALSEKPISSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSTQTCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQQKSQINLQNKKKKSHQKKITGFQFAPGSSSEVLITSADSRIRVVDSIDLVHKFKGFRNANSQISATLTANGKYVVSASEDSHVYIWKHEADSRPSRSKSVTVTRSYEHFHCHDVSVAIPWPGVGDSWGLQD---AEQNGLDNNLDEVSTANHPPTPVEVANGNEGSRSASGCTNSPLHGTISSASNTYFFDRISATWPEEKLLLATRNRSPRVSFDFTNGFNQNMSAWGMVIVTAGLRGEIRTFQNFGLPIRI 876
Match NameStatsDescription
A0A7J7HCY2E-Value: 0.000e+0, PID: 67.66(Uncharacterized protein {ECO:0000313|EMBL:KAF5949... [more]
A0A5B7B0D0E-Value: 0.000e+0, PID: 68.86(Putative WD repeat-containing protein 44-like iso... [more]
A0A2R6QWT5E-Value: 0.000e+0, PID: 67.35(WD repeat-containing protein {ECO:0000313|EMBL:PS... [more]
A0A5J5A0P4E-Value: 0.000e+0, PID: 67.16(Uncharacterized protein {ECO:0000313|EMBL:KAA8523... [more]
A0A4S4EU06E-Value: 0.000e+0, PID: 64.95(Uncharacterized protein {ECO:0000313|EMBL:THG2039... [more]
A0A2I4H4K7E-Value: 0.000e+0, PID: 66.30(WD repeat-containing protein 44-like {ECO:0000313... [more]
A0A2R6QDW6E-Value: 0.000e+0, PID: 66.92(WD repeat-containing protein {ECO:0000313|EMBL:PS... [more]
A0A5J5AC58E-Value: 0.000e+0, PID: 75.42(Uncharacterized protein {ECO:0000313|EMBL:KAA8526... [more]
A0A4S4DWK9E-Value: 0.000e+0, PID: 63.12(Uncharacterized protein {ECO:0000313|EMBL:THG0773... [more]
A0A5E4FQ28E-Value: 0.000e+0, PID: 64.59(Full=PREDICTED: WD repeat-containing {ECO:0000313... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.