Resource Type:
Polypeptide
Name:
XM_017363428.1
Identifier:
XM_017363428.1-protein
Sequence:
MRSSEDSNSPSTSNLLPPRHSNLKKKSNVFRLLARREISPRTKDSSRNLW
REDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRS
TIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHP
LCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVA
SGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNEL
ESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLW
PSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLL
SPIEPGSSPVPQEPEANALIVEMENGSTNPTVDAMETDVQPERVNQIFPL
GDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTT
PTALPSGSAESRLNLRSGSHHQYSQPYMSSTASGSGTLTRDESESQHFVE
RIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHA
VLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSP
TRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEH
LLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDE
VNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIEGL
IADH
Sequence Length:
754
Sequence Checksum:
45a0562f051868e0522abc7d3419fab7
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017363428.1, derives from mRNA, XM_017363428.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ADP0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527836.1}))
HSP 1 Score: 1073.54 bits (2775), Expect = 0.000e+0
Identity = 560/765 (73.20%), Postives = 626/765 (81.83%), Query Frame = 0
Match: A0A5J5ADP0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527836.1}))
HSP 1 Score: 1073.54 bits (2775), Expect = 0.000e+0
Identity = 560/765 (73.20%), Postives = 626/765 (81.83%), Query Frame = 0
Query: 1 MRSS---EDSNSPSTSNLLP------PRHSNLKKKS-NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPGSSPVPQEPEANALIVEMENGSTNPTVDAME-TDVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRLNLRSGSHHQYSQPYMSSTASGS-----GTLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
MRSS +DSN+PSTS+ P P H N K NVFRLLARREISP+TK SSR LW E+S +V+S LR EAA D R L+SWVEAESL+H +AKYCPLLPPPRSTIAAAFS DGKTLASTHGDHTVKIIDCQ+GRCLKVLSGHRRTPWVVRFHPL P+ILASGSLDHEVRLW+A TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+I+LKTRRSLRAVHFHPHAAPFLLTAEVN+L+S+DS++T AT P YLRYPPPTVYLADAH ++S +ELPLMSLPFL+WPSIGR +GRI LQ TD D+ S S QR + S SVRLLTYSTPSGQYELLLSPIE SSPVP+ P+ ++ EMEN P +DAM+ +VQP ER NQ+FP DPT WE+PFLQGW IGQSQAGQ+TM P N A EN S M N P+ +P+ + +SR+ RSGS H+ S+ +M ST S ++R+E++ Q FV RIQSE+A SLAA AAAELPCTVKLRIWPH+VK PC LDA+RCRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++EAD G Q H DV G STSPTRHPISA +V+YELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSV+IDGETT+P+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S LNY+ C DE+M+E
Sbjct: 1 MRSSFWADDSNAPSTSSSQPRIPQAVPSHLNSKHSGRNVFRLLARREISPQTKHSSRKLWGENSTCHVDSFGLRCEAATDARLGLVSWVEAESLQHLSAKYCPLLPPPRSTIAAAFSSDGKTLASTHGDHTVKIIDCQSGRCLKVLSGHRRTPWVVRFHPLDPEILASGSLDHEVRLWDANTAECIGSRDFYRPIASIAFHAQGELLAVASGHKLYIWHYNRRGETASPTIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSADSSMTRATSPGYLRYPPPTVYLADAHSGDRSNLANELPLMSLPFLIWPSIGRDNGRIILQHTDGDIGSNSAAQRMDPSPSVRLLTYSTPSGQYELLLSPIESSSSPVPEVPQNTSISREMENAVPQPAMDAMDIVEVQPEERSNQLFPFADPTYWELPFLQGWLIGQSQAGQRTMRPLNGSAHENSSAYGEMGNPTPRVPSVMPTTACQSRVTGRSGSRHRSSRSHMMSTTGSSEDAAFNNISREETDPQPFVNRIQSELAASLAAVAAAELPCTVKLRIWPHDVKNPCVFLDADRCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEADPGLHSQVQH-DVTGASTSPTRHPISAHQVVYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVMIDGETTIPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSHDLNYATSCLLDENMLE 764
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AM33 ((Uncharacterized protein {ECO:0000313|EMBL:MPA57384.1}))
HSP 1 Score: 1065.45 bits (2754), Expect = 0.000e+0
Identity = 562/765 (73.46%), Postives = 628/765 (82.09%), Query Frame = 0
Match: A0A5B7AM33 ((Uncharacterized protein {ECO:0000313|EMBL:MPA57384.1}))
HSP 1 Score: 1065.45 bits (2754), Expect = 0.000e+0
Identity = 562/765 (73.46%), Postives = 628/765 (82.09%), Query Frame = 0
Query: 1 MRSS---EDSNSPSTSNLLP------PRHSNLKKKSNVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPGSSPVPQEPEANALIVEMENGSTNPTVDAME-TDVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRLNLRSGSHHQYSQPYMSSTASGSG------TLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
MRSS EDSN+PSTS+ P P H N K + NVFRLLARREISPRTK SS+ LWRE SK +V+S LR EAARD R L+SWVEAESLRH +AKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPL P+ILASGSLDHEVRLW+A TAECIGSRDF RPIASIAFHAQGE LAVASGHKLYIWHY+ R +T SP+I+LKTRRSLRAVHFHPHAAPFLLTAEVN+L+SSDS++T AT P L YPPPTVYLADAH ++ +ELPLMSLPFL+WPSIGR +GRI LQ TD DV S S QR + S SVRLLTYSTPSGQYELLLSPIE S+ V +EP + + EMEN P +DAME +VQP ER NQ+ P DPT WE+PFLQGW IGQSQAGQ+TM P N A EN S MEN P+ +P+ ++SR+ RSGS H+ S+ M ST +GSG +TRD+++ Q V RIQSE+A SLAAAAAAELPCTVKLRIWPH+VK+PC LDA+RCRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++E D G Q+H DV+G STSPTRHPISA +V+YELRIYSLEEATFGLVLASR IRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSV+I+G+TT+P+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S G+NY+ C DE+M+E
Sbjct: 1 MRSSFCPEDSNAPSTSSSQPRIPQAVPSHPNSKHR-NVFRLLARREISPRTKHSSKKLWREKSKCHVDSFGLRCEAARDARHGLVSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLYPEILASGSLDHEVRLWDANTAECIGSRDFCRPIASIAFHAQGELLAVASGHKLYIWHYNKRGQTSSPTIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTRATSPGSLCYPPPTVYLADAHSGDRFNLANELPLMSLPFLIWPSIGRDNGRIILQHTDGDVGSNSAAQRVDPSPSVRLLTYSTPSGQYELLLSPIESSSTSVTEEPHNISFLREMENDVPQPAMDAMEIVEVQPEERSNQLIPFADPTYWELPFLQGWLIGQSQAGQRTMRPLNGGAHENSSAYNEMENPTPRIPSVMPTTVSQSRVTGRSGSRHRSSRSRMMST-TGSGEDAAFNNITRDQTDPQPSVSRIQSELAASLAAAAAAELPCTVKLRIWPHDVKDPCVFLDADRCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEPDPGL-HSQMHHDVIGASTSPTRHPISAHQVVYELRIYSLEEATFGLVLASREIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVMINGDTTIPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSHGVNYAASCFLDENMLE 762
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ANJ1 ((Uncharacterized protein {ECO:0000313|EMBL:MPA57386.1}))
HSP 1 Score: 1055.05 bits (2727), Expect = 0.000e+0
Identity = 555/759 (73.12%), Postives = 623/759 (82.08%), Query Frame = 0
Match: A0A5B7ANJ1 ((Uncharacterized protein {ECO:0000313|EMBL:MPA57386.1}))
HSP 1 Score: 1055.05 bits (2727), Expect = 0.000e+0
Identity = 555/759 (73.12%), Postives = 623/759 (82.08%), Query Frame = 0
Query: 5 EDSNSPSTSNLLP------PRHSNLKKKS-NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPGSSPVPQEPEANALIVEMENGSTNPTVDAME-TDVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRLNLRSGSHHQYSQPYMSSTASGSG------TLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
+DSN+PSTS+ P P H N K NVF+LLARREISPRTK SS+ LW E++K +V+S LR EAARD R LISWVEAESL+H +AKYCPLLPPPRSTIAAAFS DGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPL P+ILASGSLDHEVRLW+A TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+I+LKTRRSLRAVHFHPHAAPFLLTAEVN+L+SSDS++T AT P L YPPPTVYLADAH ++ +ELPLMSLPFL+WPSIGR +GRI LQ TD DV S S QR + S SVRLLTYSTPSGQYELLLSPIE S+ V +EP + + EMEN P +DAME +VQP ER NQ+ P DPT WE+PFLQGW IGQSQAGQ+TM P N A EN S MEN P+ +P+ ++SR+ RSGS H+ S+ M ST +GSG +TRD+++ Q V RIQSE+A SLAAAAAAELPCTVKLRIWPH+VK+PC LDA+RCRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++E D G Q+H DV+G STSPTRHPISA +V+YELRIYSLEEATFGLVLASR IRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSV+I+G+TT+P+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S G+NY+ C DE+M+E
Sbjct: 8 DDSNAPSTSSSQPRIPQAVPSHLNSKHSGRNVFQLLARREISPRTKHSSKTLWGENTKCHVDSFGLRCEAARDARHGLISWVEAESLQHLSAKYCPLLPPPRSTIAAAFSSDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLYPEILASGSLDHEVRLWDANTAECIGSRDFYRPIASIAFHAQGELLAVASGHKLYIWHYNRRGETSSPTIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTRATSPGSLCYPPPTVYLADAHSGDRFNLANELPLMSLPFLIWPSIGRDNGRIILQHTDGDVGSNSAAQRVDPSPSVRLLTYSTPSGQYELLLSPIESSSTSVTEEPHNISFLREMENDVPQPAMDAMEIVEVQPEERSNQLIPFADPTYWELPFLQGWLIGQSQAGQRTMRPLNGGAHENSSAYNEMENPTPRIPSVMPTTVSQSRVTGRSGSRHRSSRSRMMST-TGSGEDAAFNNITRDQTDPQPSVSRIQSELAASLAAAAAAELPCTVKLRIWPHDVKDPCVFLDADRCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEPDPGL-HSQMHHDVIGASTSPTRHPISAHQVVYELRIYSLEEATFGLVLASREIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVMINGDTTIPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSHGVNYAASCFLDENMLE 764
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2LX92 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL06p022154:mrna}))
HSP 1 Score: 1052.35 bits (2720), Expect = 0.000e+0
Identity = 540/762 (70.87%), Postives = 618/762 (81.10%), Query Frame = 0
Match: A0A7N2LX92 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL06p022154:mrna}))
HSP 1 Score: 1052.35 bits (2720), Expect = 0.000e+0
Identity = 540/762 (70.87%), Postives = 618/762 (81.10%), Query Frame = 0
Query: 1 MRSS---EDSNSPSTSNLLPPRHSNLKKK---SNVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPG-SSPVPQEPEANALIVEMENGSTNPTVDAMET-DVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRLNLRSGSHHQYSQPYM-SSTASGSGTLT----RDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
MR+S +D+N+PSTS P H+N K NVFRLLARRE+ PRTK SS+ LW E SK +++S R EAA D R+ L+SWVEAE+LRH +AKYCPLLPPPRSTIAAAFSPDG+TLASTHGDHTVKIIDCQTG CLKVLSGHRRTPWVVRFHP P+ILASGSLDHEVRLW+A TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLY+WHY+ R ET SP I+LKTRRSLRAVHFHPHAAPFLLTAEVN+L+SSDS++T+AT P YLRYPPPTV+LAD+H + E+PLMSLPFL+WPS+ R DGRI LQ T DV S++ R + S SVRLLTYSTPSGQYELLLSP++P SSPVP++ ++L+ E +N T +DAMET + QP ER N+ FP GDP WE+PFLQGW IGQSQAGQ+TM NV A EN+S + MEN + +P+G+ +SR+ RS + + S+ M +T S G + RDE + Q V RIQSE+ATSLAAAAAAELPCTVKLRIWPH+VK+PC LDAE+CRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++EAD G QVH D+ G +TSPTRHPISA +V+YELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVP+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI Q++ S +N + DE+M+E
Sbjct: 8 MRASVYGDDANAPSTSGPRSP-HTNSNSKHSGGNVFRLLARREVCPRTKSSSKRLWGEGSKLHLDSVGSRHEAAIDARQGLVSWVEAETLRHLSAKYCPLLPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGSCLKVLSGHRRTPWVVRFHPFYPEILASGSLDHEVRLWDANTAECIGSRDFYRPIASIAFHAQGELLAVASGHKLYMWHYNRRGETSSPVIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTIATSPGYLRYPPPTVFLADSHSSGRPCLADEIPLMSLPFLIWPSLARDDGRISLQNTHGDVGSSNVQPRVDPSASVRLLTYSTPSGQYELLLSPVDPNSSSPVPEDTGNDSLMSETDNAITQSAMDAMETMETQPEERNNRFFPFGDPMYWELPFLQGWLIGQSQAGQRTMSSVNVSAHENISAFSEMEN--PVASSVMPTGANQSRVTGRSSARQRSSRSRMVPTTGSAEGAILNHIPRDEGDPQLAVTRIQSELATSLAAAAAAELPCTVKLRIWPHDVKDPCAFLDAEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEADPGL-QSQVHHDMAGAATSPTRHPISAHQVLYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQHDSSYAMNCATSRFLDENMLE 765
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1AW66 ((uncharacterized protein LOC110421821 isoform X2 {ECO:0000313|RefSeq:XP_021291180.1}))
HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 529/728 (72.66%), Postives = 594/728 (81.59%), Query Frame = 0
Match: A0A6J1AW66 ((uncharacterized protein LOC110421821 isoform X2 {ECO:0000313|RefSeq:XP_021291180.1}))
HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 529/728 (72.66%), Postives = 594/728 (81.59%), Query Frame = 0
Query: 28 NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPG-SSPVPQEPEANALIVEMENGSTNPTVDAMET-DVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRL----NLRSGSHHQYSQPYMSSTASGSGTLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
NVF+LLARRE+SPRTK SSR LW ED KS+VNS EAARD RR L+SWVEAESL+HF+AKYCPLLPPPRSTIAAAFSPDG TLASTHGDHTVKIIDCQTG CLKVLSGHRRTPWVVRFHPL P+ILASGSLDHEVRLWNA TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+IILKTRRSLRAVHFHP+AAPFLLTAEVN+L+SSDS++T+AT P YLRYPPPTVYLADAH ++S +ELPL+SLP L+WPS R +GR LQ TD D+ S QR + S SVRLLTYSTP+GQYELLLSPIEP SSP+P+E AN L EME ++ ++ MET +VQ ER NQ FP GDPTSWE+PFLQGW IGQ+QAGQ++M EN + N S + +P+ ++SR+ + R S S +G ++ D S+SQ V RIQSE+ATSL AAAAELPCTVKLRIWPH++K+PC LD E+CRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++EAD G Q++PDV G STSPTRHPISA VMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEH+LLAYGRRHSSLLKSVVIDGETTVP+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S+G+N++ DE+M+E
Sbjct: 24 NVFQLLARREVSPRTKRSSRKLWGEDPKSHVNSFGSTCEAARDARRDLLSWVEAESLQHFSAKYCPLLPPPRSTIAAAFSPDGNTLASTHGDHTVKIIDCQTGSCLKVLSGHRRTPWVVRFHPLYPEILASGSLDHEVRLWNANTAECIGSRDFYRPIASIAFHAQGEVLAVASGHKLYIWHYNRRGETSSPAIILKTRRSLRAVHFHPYAAPFLLTAEVNDLDSSDSSMTVATSPGYLRYPPPTVYLADAHSSDRSNLANELPLVSLPLLIWPSFARDNGRTSLQHTDGDIGSNGVHQRGDQSASVRLLTYSTPTGQYELLLSPIEPNSSSPLPEETGANPLPSEMETDVSHSAMEPMETMEVQSVERSNQFFPFGDPTSWELPFLQGWLIGQTQAGQRSMRLATSAGHENSLPAGETGNSASVASSGMPTSVSQSRVAGRSSSRHRSSRSRMMSSSGSGEAGYSSIMHDGSDSQPAVNRIQSELATSL--AAAAELPCTVKLRIWPHDMKDPCAFLDPEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEADPGV-QSQLNPDVTGASTSPTRHPISAHRVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKSVVIDGETTVPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSNGINHNTSSFIDENMLE 748
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1AXP3 ((uncharacterized protein LOC110421821 isoform X1 {ECO:0000313|RefSeq:XP_021291179.1}))
HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 529/728 (72.66%), Postives = 594/728 (81.59%), Query Frame = 0
Match: A0A6J1AXP3 ((uncharacterized protein LOC110421821 isoform X1 {ECO:0000313|RefSeq:XP_021291179.1}))
HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 529/728 (72.66%), Postives = 594/728 (81.59%), Query Frame = 0
Query: 28 NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPG-SSPVPQEPEANALIVEMENGSTNPTVDAMET-DVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRL----NLRSGSHHQYSQPYMSSTASGSGTLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
NVF+LLARRE+SPRTK SSR LW ED KS+VNS EAARD RR L+SWVEAESL+HF+AKYCPLLPPPRSTIAAAFSPDG TLASTHGDHTVKIIDCQTG CLKVLSGHRRTPWVVRFHPL P+ILASGSLDHEVRLWNA TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+IILKTRRSLRAVHFHP+AAPFLLTAEVN+L+SSDS++T+AT P YLRYPPPTVYLADAH ++S +ELPL+SLP L+WPS R +GR LQ TD D+ S QR + S SVRLLTYSTP+GQYELLLSPIEP SSP+P+E AN L EME ++ ++ MET +VQ ER NQ FP GDPTSWE+PFLQGW IGQ+QAGQ++M EN + N S + +P+ ++SR+ + R S S +G ++ D S+SQ V RIQSE+ATSL AAAAELPCTVKLRIWPH++K+PC LD E+CRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++EAD G Q++PDV G STSPTRHPISA VMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEH+LLAYGRRHSSLLKSVVIDGETTVP+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S+G+N++ DE+M+E
Sbjct: 24 NVFQLLARREVSPRTKRSSRKLWGEDPKSHVNSFGSTCEAARDARRDLLSWVEAESLQHFSAKYCPLLPPPRSTIAAAFSPDGNTLASTHGDHTVKIIDCQTGSCLKVLSGHRRTPWVVRFHPLYPEILASGSLDHEVRLWNANTAECIGSRDFYRPIASIAFHAQGEVLAVASGHKLYIWHYNRRGETSSPAIILKTRRSLRAVHFHPYAAPFLLTAEVNDLDSSDSSMTVATSPGYLRYPPPTVYLADAHSSDRSNLANELPLVSLPLLIWPSFARDNGRTSLQHTDGDIGSNGVHQRGDQSASVRLLTYSTPTGQYELLLSPIEPNSSSPLPEETGANPLPSEMETDVSHSAMEPMETMEVQSVERSNQFFPFGDPTSWELPFLQGWLIGQTQAGQRSMRLATSAGHENSLPAGETGNSASVASSGMPTSVSQSRVAGRSSSRHRSSRSRMMSSSGSGEAGYSSIMHDGSDSQPAVNRIQSELATSL--AAAAELPCTVKLRIWPHDMKDPCAFLDPEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEADPGV-QSQLNPDVTGASTSPTRHPISAHRVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKSVVIDGETTVPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSNGINHNTSSFIDENMLE 748
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EMM1 ((Transducin family protein / WD-40 repeat family protein isoform 5 {ECO:0000313|EMBL:EOY06260.1}))
HSP 1 Score: 1043.11 bits (2696), Expect = 0.000e+0
Identity = 526/728 (72.25%), Postives = 591/728 (81.18%), Query Frame = 0
Match: A0A061EMM1 ((Transducin family protein / WD-40 repeat family protein isoform 5 {ECO:0000313|EMBL:EOY06260.1}))
HSP 1 Score: 1043.11 bits (2696), Expect = 0.000e+0
Identity = 526/728 (72.25%), Postives = 591/728 (81.18%), Query Frame = 0
Query: 28 NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEP-GSSPVPQEPEANALIVEMENGSTNPTVDAMET-DVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRL----NLRSGSHHQYSQPYMSSTASGSGTLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
NVF+LLARRE+SPRTK SSR LW E+ KS +S +AARD RR L+SWVEAESLRHF+AKYCPLLPPPRSTIAAAFSPDG TLASTHGDHTVKIIDCQTG CLKVL+GHRRTPWVVRFHPL P+ILASGSLDHEVRLWNA TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+IILKTRRSLRAVHFHP+AAPFLLTAEVN+L+SSDS++T+AT P YLRYPPPTVYLADAH ++S +ELPL+SLP L+WPS R +GR LQ TD DV S QR + S SVRLLTYSTP+GQYELLLSPIEP SSP+P+E AN L EME ++ ++ MET +VQ ER NQ FP GDPTSWE+PFLQGW IGQ+QAGQ+ M EN+ + N S + +P+ ++SR+ +LR S S +G + D S+ Q V RIQSE+ATSL AAAAELPCTVKLRIWPH++K+PC LD E+CRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++EAD G Q++PDV G STSPTRHPISA VMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEH+LLAYGRRHSSLLKSVVIDGETTVP+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S+G+N++ DE+M+E
Sbjct: 24 NVFQLLARREVSPRTKRSSRKLWGEEPKSRHDSFGSTCQAARDARRDLLSWVEAESLRHFSAKYCPLLPPPRSTIAAAFSPDGNTLASTHGDHTVKIIDCQTGSCLKVLTGHRRTPWVVRFHPLYPEILASGSLDHEVRLWNANTAECIGSRDFYRPIASIAFHAQGEVLAVASGHKLYIWHYNRRGETSSPAIILKTRRSLRAVHFHPYAAPFLLTAEVNDLDSSDSSMTVATSPGYLRYPPPTVYLADAHSSDRSNLANELPLVSLPLLIWPSFARDNGRTSLQHTDGDVGSNGVHQRGDQSASVRLLTYSTPTGQYELLLSPIEPNNSSPLPEETGANPLPSEMETDGSHSAMEPMETMEVQSVERSNQFFPFGDPTSWELPFLQGWLIGQTQAGQRNMRLATSAGHENLLPAGETGNSASVVSSGMPTSVSQSRVAGRSSLRHRSSRSRMMSSSGSGEAGYSNIMHDGSDPQPAVNRIQSELATSL--AAAAELPCTVKLRIWPHDMKDPCAFLDPEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEADPGV-QSQLNPDVTGASTSPTRHPISAHRVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKSVVIDGETTVPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSNGINHNSSSFIDENMLE 748
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EN46 ((Transducin family protein / WD-40 repeat family protein isoform 1 {ECO:0000313|EMBL:EOY06256.1}))
HSP 1 Score: 1043.11 bits (2696), Expect = 0.000e+0
Identity = 526/728 (72.25%), Postives = 591/728 (81.18%), Query Frame = 0
Match: A0A061EN46 ((Transducin family protein / WD-40 repeat family protein isoform 1 {ECO:0000313|EMBL:EOY06256.1}))
HSP 1 Score: 1043.11 bits (2696), Expect = 0.000e+0
Identity = 526/728 (72.25%), Postives = 591/728 (81.18%), Query Frame = 0
Query: 28 NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEP-GSSPVPQEPEANALIVEMENGSTNPTVDAMET-DVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRL----NLRSGSHHQYSQPYMSSTASGSGTLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
NVF+LLARRE+SPRTK SSR LW E+ KS +S +AARD RR L+SWVEAESLRHF+AKYCPLLPPPRSTIAAAFSPDG TLASTHGDHTVKIIDCQTG CLKVL+GHRRTPWVVRFHPL P+ILASGSLDHEVRLWNA TAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+IILKTRRSLRAVHFHP+AAPFLLTAEVN+L+SSDS++T+AT P YLRYPPPTVYLADAH ++S +ELPL+SLP L+WPS R +GR LQ TD DV S QR + S SVRLLTYSTP+GQYELLLSPIEP SSP+P+E AN L EME ++ ++ MET +VQ ER NQ FP GDPTSWE+PFLQGW IGQ+QAGQ+ M EN+ + N S + +P+ ++SR+ +LR S S +G + D S+ Q V RIQSE+ATSL AAAAELPCTVKLRIWPH++K+PC LD E+CRL IPHAVLCSEMGAHFSPCGRFLAACVACVLP++EAD G Q++PDV G STSPTRHPISA VMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEH+LLAYGRRHSSLLKSVVIDGETTVP+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S+G+N++ DE+M+E
Sbjct: 24 NVFQLLARREVSPRTKRSSRKLWGEEPKSRHDSFGSTCQAARDARRDLLSWVEAESLRHFSAKYCPLLPPPRSTIAAAFSPDGNTLASTHGDHTVKIIDCQTGSCLKVLTGHRRTPWVVRFHPLYPEILASGSLDHEVRLWNANTAECIGSRDFYRPIASIAFHAQGEVLAVASGHKLYIWHYNRRGETSSPAIILKTRRSLRAVHFHPYAAPFLLTAEVNDLDSSDSSMTVATSPGYLRYPPPTVYLADAHSSDRSNLANELPLVSLPLLIWPSFARDNGRTSLQHTDGDVGSNGVHQRGDQSASVRLLTYSTPTGQYELLLSPIEPNNSSPLPEETGANPLPSEMETDGSHSAMEPMETMEVQSVERSNQFFPFGDPTSWELPFLQGWLIGQTQAGQRNMRLATSAGHENLLPAGETGNSASVVSSGMPTSVSQSRVAGRSSLRHRSSRSRMMSSSGSGEAGYSNIMHDGSDPQPAVNRIQSELATSL--AAAAELPCTVKLRIWPHDMKDPCAFLDPEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPHLEADPGV-QSQLNPDVTGASTSPTRHPISAHRVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKSVVIDGETTVPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSNGINHNSSSFIDENMLE 748
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P3ZZ73 ((uncharacterized protein LOC107422615 isoform X1 {ECO:0000313|RefSeq:XP_015887571.1}) (uncharacterized protein LOC107422615 isoform X2 {ECO:0000313|RefSeq:XP_015887572.1}))
HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 530/760 (69.74%), Postives = 605/760 (79.61%), Query Frame = 0
Match: A0A6P3ZZ73 ((uncharacterized protein LOC107422615 isoform X1 {ECO:0000313|RefSeq:XP_015887571.1}) (uncharacterized protein LOC107422615 isoform X2 {ECO:0000313|RefSeq:XP_015887572.1}))
HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 530/760 (69.74%), Postives = 605/760 (79.61%), Query Frame = 0
Query: 4 SEDSNSPSTSNLLPPRHSNLK-KKSNVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPG-SSPVPQEPEANALIVEMENGSTNPTVDAME-TDVQPE-RVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTAL------PSGSAESRLNLRSGSHHQYSQPYM-----SSTASGSGTLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
++++N+PSTS + ++ K + SNVF+LL RRE+SP++K S+ LW E SK + SA R E+ARD + LISWVEAESLRH +AKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG CLKVLSGHRRTPWVVRFHPL PDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGE LAVASGHKLYIWHY+ R ET SP+I+LKTRRSLRAVHFHPH APFLLTAEVN+L+SSDS++TLAT P YLRYPPPT+YLADAH ++S LPLMSLPFL+ PS R +GRI + +TDAD S S QR + S SVRLLTYSTPSGQYELLLSP+EP SSP+P+E ANA EME + +D +E ++VQPE R N IFP GDPT WE+PFLQGW IGQ+QAGQ+ M + A E+ + HG T TA P+ + R+ R GS H+ S+ M SS +G ++ DE + Q V R+QSE+A SL AAAELPCTVKLRIWPH+VK PC LDAE+CRL IPHAVLCSEMGAHFSPCGRFLAACVACVLPN+EAD G Q++ D G +TSPTRHP+SA +V+YELRIYSLEEATFG VLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRH SLLKSVVIDGETTVP+YTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI QY+ S+G+N++ DE+M+E
Sbjct: 8 ADEANAPSTSTTRIHQAASCKHRASNVFKLLVRREVSPQSKYQSKKLWGESSKCRLESARRRCESARDAKLGLISWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLSGHRRTPWVVRFHPLYPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGELLAVASGHKLYIWHYNRRGETSSPTIVLKTRRSLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTLATSPGYLRYPPPTLYLADAHSIDRSGVADGLPLMSLPFLILPSFARDNGRISMHRTDADAGSNSVQQREDPSASVRLLTYSTPSGQYELLLSPVEPNSSSPMPEETGANASTSEMETEVSQSAMDTLEPSEVQPEGRTNPIFPFGDPTYWELPFLQGWLIGQTQAGQRNMRSLSSAAHESPA-------HGDTLSTAQTLSSLNPTNVNQPRVTGRPGSRHRTSRSRMMSVVGSSEGAGINSIMHDEGDPQP-VSRMQSELANSL---AAAELPCTVKLRIWPHDVKSPCAPLDAEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPNLEADPGL-QSQLNQDAAGAATSPTRHPLSAHKVVYELRIYSLEEATFGSVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHGSLLKSVVIDGETTVPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQYDSSNGINHTTCGFLDENMLE 755
BLAST of XM_017363428.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WPU4 ((uncharacterized protein LOC113734384 {ECO:0000313|RefSeq:XP_027116711.1}))
HSP 1 Score: 1039.25 bits (2686), Expect = 0.000e+0
Identity = 520/726 (71.63%), Postives = 599/726 (82.51%), Query Frame = 0
Match: A0A6P6WPU4 ((uncharacterized protein LOC113734384 {ECO:0000313|RefSeq:XP_027116711.1}))
HSP 1 Score: 1039.25 bits (2686), Expect = 0.000e+0
Identity = 520/726 (71.63%), Postives = 599/726 (82.51%), Query Frame = 0
Query: 28 NVFRLLARREISPRTKDSSRNLWREDSKSNVNSAVLRGEAARDVRRSLISWVEAESLRHFTAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGRCLKVLSGHRRTPWVVRFHPLCPDILASGSLDHEVRLWNAKTAECIGSRDFYRPIASIAFHAQGEFLAVASGHKLYIWHYSGRVETVSPSIILKTRRSLRAVHFHPHAAPFLLTAEVNELESSDSTVTLATCPNYLRYPPPTVYLADAHPDNQSRQVSELPLMSLPFLLWPSIGRGDGRIPLQQTDADVSSTSTTQRAESSGSVRLLTYSTPSGQYELLLSPIEPGSSPVPQEPEANALIVEMENGSTNPTVDAMETDVQP-ERVNQIFPLGDPTSWEVPFLQGWFIGQSQAGQQTMHPFNVVAAENVSNSTRMENHGSTTPTALPSGSAESRLNLRSGSHHQYSQPYMSSTASGSG----TLTRDESESQHFVERIQSEIATSLAAAAAAELPCTVKLRIWPHNVKEPCRLLDAERCRLIIPHAVLCSEMGAHFSPCGRFLAACVACVLPNVEADAGFPGQQVHPDVMGVSTSPTRHPISAQEVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGETTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRIFQYNVSSGLNYSGICSSDEDMIE 748
NVFRLLARRE++PR K SS+ W E S +V++ + +A D RR LISWVEAESL+H TA YCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG+CLKVLSGHRRTPWVVRFHPL PD+LASGSLDHEVRLW+AKTAECIGSRDFYRPIASIAFHA+GEFLAVASGHKLYIWHY+ ET P+I+LKTRRSLRAVHFHP+AAPFLLTAEVN+L+S+DS++TLAT P YLRYPPPTVYLADAH +++S +ELPL+SLPFL+WP +GR D R+PLQQTD DV S QR + S SVRLLTYSTP+GQYE+LLSP+EP SS Q+P N+L+ E +N + P VDAMETD+QP ER N FP DP WE+PFLQGW IGQSQAG + M N E++S+ +EN + +++ + +A SR+ RSGS H+ S+P + SG G ++ D+ + + ++Q E+ATS+AAAA AELPCTVKLRIW H+VK+PC LDAERCRL IPHAVLCSEMGAHFSPCGRFLAACVACVLPN+EAD GFPG QVH D GV+TSPTRHPISA +VMYELR+YSLEEATFG+VLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGE TVP+YTILE+YRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRI Q+N +GLN + S E+M+E
Sbjct: 52 NVFRLLARREVAPRMKHSSKKFWEEASARHVDAFGTKSDAEIDARRGLISWVEAESLQHLTADYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLSGHRRTPWVVRFHPLYPDLLASGSLDHEVRLWDAKTAECIGSRDFYRPIASIAFHARGEFLAVASGHKLYIWHYNRMAETSPPTIVLKTRRSLRAVHFHPYAAPFLLTAEVNDLDSTDSSMTLATSPGYLRYPPPTVYLADAHSNSRSNLPNELPLLSLPFLIWPLVGRSDSRLPLQQTDTDVGLDSAQQRVDPSNSVRLLTYSTPTGQYEVLLSPMEPNSSTEEQQP--NSLMGETDNAVSQPVVDAMETDIQPEERNNHFFPFSDPAYWELPFLQGWLIGQSQAGLRAMRSQNGGGNEHISSFNNIENPAPLS-SSMSNDAAHSRVTGRSGSRHRSSRPRVPGAGSGDGATYNSIVHDDGNTNPIISQVQPEVATSMAAAATAELPCTVKLRIWSHDVKDPCAPLDAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACVLPNMEADPGFPG-QVHHDATGVATSPTRHPISAHKVMYELRVYSLEEATFGMVLASRAIRAAHCLTSIQFSPTSEHLLLAYGRRHSSLLKSVVIDGELTVPIYTILEIYRVSDMELVRVLPSAEDEVNVACFHPSVGGGLVYGTKEGKLRILQFNNPNGLNPASASFSHENMLE 773
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5ADP0 | E-Value: 0.000e+0, PID: 73.20 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8527... [more] |
| A0A5B7AM33 | E-Value: 0.000e+0, PID: 73.46 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5738... [more] |
| A0A5B7ANJ1 | E-Value: 0.000e+0, PID: 73.12 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5738... [more] |
| A0A7N2LX92 | E-Value: 0.000e+0, PID: 70.87 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A6J1AW66 | E-Value: 0.000e+0, PID: 72.66 | (uncharacterized protein LOC110421821 isoform X2 {... [more] |
| A0A6J1AXP3 | E-Value: 0.000e+0, PID: 72.66 | (uncharacterized protein LOC110421821 isoform X1 {... [more] |
| A0A061EMM1 | E-Value: 0.000e+0, PID: 72.25 | (Transducin family protein / WD-40 repeat family p... [more] |
| A0A061EN46 | E-Value: 0.000e+0, PID: 72.25 | (Transducin family protein / WD-40 repeat family p... [more] |
| A0A6P3ZZ73 | E-Value: 0.000e+0, PID: 69.74 | (uncharacterized protein LOC107422615 isoform X1 {... [more] |
| A0A6P6WPU4 | E-Value: 0.000e+0, PID: 71.63 | (uncharacterized protein LOC113734384 {ECO:0000313... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |