XM_017363877.1

Resource Type: 
Polypeptide
Name: 
XM_017363877.1
Identifier: 
XM_017363877.1-protein
Sequence: 
MSLRRTNNTSYYSMSSSQHEVESSGPSVIDSSLKVLGLIDQRHSLEELDD
KIKGSSSENKCRVGKSAVRKLLYEDMSHEEGLDINTNNTDKEENFPPVCN
SDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTG
GKLKPLPGARGTQFLAKRANRIGSASGGTFDWDDYQEDGGGQFLRKEKGA
FSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFD
SDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLNDARDGMVETGTQKDNPD
MLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLR
TLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRK
ARKQCDETEDMCNLHCELVEKSMNEKELERGVIGENERCVVSAPSGKKTV
KKGCVQEQLNTYLPIACRTRQKASTQTQRDTKTSTILVKGIDNLSAPIAP
KRKRSRAAINTLARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQ
KGNVHPKPSKEEINGMSNSKIKFTQMKSGIKRKILASGQSQKELVEDTTV
DHSPNHHSAIGTSEDSAVIKAQTAEYTIGKSRSAITAAEGAKLNPWSKES
LKDICTPKSSAYVTPNIYTKSVNKASPVGKEYHKPSFRKKPLSSPLKKED
SRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLG
ASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLI
DERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDI
LASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGA
SIYSSELLLNGIVIQKLEHKRHQLFAEIRKDGNEFNLLSAPFLAQTYT
Sequence Length: 
948
Sequence Checksum: 
aab242bc40b914325a86de7eb4d67668
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017363877.1, derives from mRNA, XM_017363877.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z9I1 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172} (Fragment))

HSP 1 Score: 683.33 bits (1762), Expect = 0.000e+0
Identity = 434/1023 (42.42%), Postives = 594/1023 (58.06%), Query Frame = 0
 
Query:   18 QHEVESSGPSVIDSSLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHE-----EGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRANRIGS-ASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLND-----ARDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDE----------------------TEDMCNLHCELVEKSMNEKELERGVIGENERCVVSA-PSGKKTVKKGCVQEQLNTYLPIACRTRQ-KASTQTQRDTKTSTILVKGIDNLSAPIAPKRKRSRAAIN------TLARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQ-------KGNVHPKPSKEEINGMSN------------------SKIKFTQMKS-------GIKRKILASG-----------QSQKELVEDT-----TVDHSPNHHSA--IGTSEDSAVIKAQTAEYTIGKSRSAIT-AAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE----------IRKDGNEF 935
            +H  E  G  +I  S K    IDQ   + E ++++KG  +ENKCRVG S VRKL  ED   E     + +D      D  +     CN+D+E  GLSYV+SQEPG++SQ  AL FVD FLK +V E DQE +  +ST GK K +  A+GTQ LAK AN   +   GG FDWDD  ED GGG+F  K K AF ++G +  +S  + +   HLN     +  E+ +K EQ D+   + GL  S+S+L+LH  K  D + +V      ++L+K+L++     + DG   TGT +D  DML++G DTQLAA+AMEALCNGV + D + N  NQGA+    S+ KG       S ++F++KRAS S    LT RQ+ Q +R G  L+K  S+ S++QS++ +KQCD                       +E+   +  ++V++   E+ L+R  I E ++C  S   SG    KK  +QEQL ++ PIA RTR+ + + Q +R    S  + + I++L+     K KR   + +        A++N +E    Q    +  K+T    S  K+ G  T +       +G    +    + +G SN                  +++K ++  +       GIKR+  +S            QS++   + +     + D S NH+S    G      V+  Q+++++ GK+ +  T +AEGA +    + S ++ C    SA  TP   T  +N ASP+  G EY K S RK    S L KE + +I DGPE     K+ R+RRD+  V+VLFS HLD D IKQQKK+L RLGASVASS+SDATHF+ D+FVRTRNMLEAIAFGKPVVTH WLESCGQASC IDE+NYILRDAKKEKE GFSLPVSLARACQ PL QG +V ITPNTKPGK +LASLVKAVHG+AV+RIGRSA KD+ +  D ++LSCEEDYA CVPFLEKGA++YSSELLLNGIV QKLE++RH+LF +          ++KD N +
Sbjct:   11 EHTAEDDGVPIIRDSSKFREEIDQERVMGEYNEQMKGLRNENKCRVGSSTVRKLFMEDTVGETKRSNDYIDNACGRADISQLL--ACNNDLE--GLSYVNSQEPGDSSQANALGFVDSFLKFSVIEFDQEVDFGKSTWGKSKHVSSAKGTQSLAKTANLKNTFGEGGIFDWDDNCEDEGGGEFFTKMKEAFFDNGGQRRRSFSQPRKPMHLNSKGSEASNESRDKEEQPDIHEKIPGLVHSNSRLVLHNPKGNDTTAQVTETKFSKSLVKELDEQLNIGSSDGTEATGTDQDVEDMLNVGFDTQLAAEAMEALCNGVDVADSDFNDANQGAKKMSKSSPKGETKNNAHSKQNFLKKRASSSNCGVLT-RQSKQIERIGAKLSKELSVSSQKQSKRVKKQCDTDLVKAKLKRAKSNAEECFATNVSENGDKITSKVVKQRKEERALKRSDIDEVDKCHASVLSSGSILAKKRRLQEQLGSFTPIAYRTRKCREAYQLKRAGNASNDVREEINDLTEVDVLKGKRKSCSTDFDASEVLNAKENFSELGSNQSGELENGKLTENGQSTPKLTGKTTAKVVQLSYPRGRRTHRKFSGQFDGTSNLHGSARQSVGQEATGKFIARLKRSKTDAISTCIDLGIKRQTRSSACAGPILPALDTQSERRSFQQSVDKVGSGDASLNHNSVEFNGGEIPKDVVGVQSSKHSDGKNDADTTLSAEGAGVYARLEASPREGCKQSGSACATPVNCTTPINAASPICMGDEYLKQSCRKNLSRSSLMKEINSLIADGPEPTSAIKDTRRRRDMANVRVLFSHHLDEDTIKQQKKILARLGASVASSISDATHFITDKFVRTRNMLEAIAFGKPVVTHLWLESCGQASCFIDEKNYILRDAKKEKEFGFSLPVSLARACQRPLFQGQKVLITPNTKPGKGLLASLVKAVHGLAVERIGRSALKDDKIPDDLLLLSCEEDYAVCVPFLEKGAAVYSSELLLNGIVTQKLEYERHRLFVDHVKRTRSTIWLKKDSNRY 1028    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z966 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 437/1024 (42.68%), Postives = 596/1024 (58.20%), Query Frame = 0
 
Query:   13 SMSSSQHEVESSGPSVIDSSLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHE-EGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRANRIGSASG--GTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLN-----DARDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCD----------------------ETEDMCNLHCELVEKSMNEKELERGVIGENERCVVSAPS-GKKTVKKGCVQEQLNTYLPIACRTRQKASTQTQRDTKTSTILVKGIDNLS--APIAPKRKRSRAAINTLARKNCTEFKF----IQPAHPKKTKVTHTEPSDLKICGTGTIQ----------------------KGNVHPKPSK---EEINGMSNSKIKFTQ-------MKSGIKRKILASG-----------QSQKELVEDT-----TVDHSPNHHS-AIGTSE-DSAVIKAQTAEYTIGKSRSAIT-AAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE----------IRKDGNEF 935
            S S  +H  E  G  V+  S      IDQ H + E ++++ G  +E+KCR+G S VRKL  ED   E +G +   NNT  E + P +   + ELAGLSYV+SQEPGE+SQ  ALDFVD+FL  +V E DQE +  +STG K K +  A+GTQ LAK  N + S  G  GTFDWDD +ED GGG+F  ++K AF ++  +  +S  + +  +HLN     +V  + +K E+ D+ + + GL  SD +L+LH  K  D + +V      +NLIK+L+     D+ DG   TGT KD  DML++G DTQ+AA+AM ALC+GV + D + N  NQGA+  + S  KG       S +D ++KR+S S    + TR++ +TKR  T L+K  S+  ++Q + A+KQ D                       +E++  +  ++V     E+ L+R  I   + C V+A S G  + KK C+QEQL T++PIA RTRQ       +    +T     I+ L+    +  KRK      ++    N  E  F     Q    +  K+T  + S+ KI G   ++                       GN+    ++   +E NG S +K+K+++       M  GIKRK  +S            QS++   + +     + D + N +S AI  SE    V   Q ++ T GKS    T +AEGA +    + S ++ C    SA  TP      +N ASP+  G EY K S RK    S L KE + +I +GPE     K+ R+RRD+  V VLFS HLD D+IKQQKK+L RLGASVASS+SDATHF+ D+FVRTRNMLEAIAFGKPVVTH WLESCGQASC IDE+NYILRDAKKEKE GFSLPVSLARACQ PLL+G +V+ITPNTKPGK++LASLVKAV G+AV+RIGRS+ KD+ +  + +VLSCEEDYA CVPFLEKGA++YSSELLLNGIV QKLE++RH+LF +          ++KD N +
Sbjct:  214 SQSLKEHIAEDDGVPVVRDSANFREEIDQDHVMGEYNEQMNGRRNESKCRIGSSIVRKLFMEDAFAEIKGHNDYINNTGGEADLPQLLTCNNELAGLSYVNSQEPGESSQANALDFVDRFLNFSVIEFDQEIDFRKSTGEKKKHVSSAKGTQSLAKICN-LKSTVGERGTFDWDDSREDEGGGEFFSRKKEAFFDNDVQRRRSFTQHRKPQHLNSKGSGAVNGSRDKEERLDIHDKIIGLDHSDLRLVLHNPKWKDTTTQVTETKFRKNLIKELDEQLNIDSSDGREATGTDKDMEDMLNVGFDTQMAAEAMGALCHGVDVTDNDFNDANQGAKNMYKSYPKGETKNRAHSKKDSLKKRSS-SSDCGVITRKSKKTKRIVTKLSKESSVSLQKQVKNAKKQRDLEVVKAEPKRVQSYAEVHFATNVSENLDKITSKVVNHRKEERALKRSDIDNVDNCHVAASSSGLISAKKPCLQEQLGTFIPIAYRTRQCRVANQLKPVGNATNDRAEINYLTEVGALKGKRKSCWTGFDSFEVLNPKEKSFELGSNQSGELENVKLTGHDQSNPKIAGKTIVKIDELSYPSGRRTQRKVSGQLDGTGNLRGSSNQSVGQEANGQSIAKLKWSKTNSISTCMDLGIKRKTRSSACAGSVLQALDTQSKQRSFQQSVDKVGSGDAALNCNSVAINGSEIPKDVGGVQASKRTDGKSDEDTTLSAEGAGVKARLEASPREGCKQSGSACATPANCRTPINAASPICMGDEYLKQSCRKNLSRSSLMKEINSLIANGPEPTSALKDTRRRRDMANVHVLFSHHLDEDIIKQQKKILARLGASVASSISDATHFITDKFVRTRNMLEAIAFGKPVVTHLWLESCGQASCFIDEKNYILRDAKKEKEFGFSLPVSLARACQCPLLRGHKVYITPNTKPGKELLASLVKAVQGLAVERIGRSSLKDDKIPDELLVLSCEEDYAVCVPFLEKGAAVYSSELLLNGIVTQKLEYERHRLFVDHVKRTRSTIWLKKDSNRY 1235    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C333 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})

HSP 1 Score: 654.825 bits (1688), Expect = 0.000e+0
Identity = 430/988 (43.52%), Postives = 575/988 (58.20%), Query Frame = 0
 
Query:   13 SMSSSQHEVESSGPSVIDSSLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHEEGLDIN--TNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRANRIGSASG--GTFDWDDYQED-GGGQFL-RKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLNDARDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDETE----------------------DMCNLHCELVEKSMNEKELERGVIGENERCVVSAPS-GKKTVKKGCVQEQLNTYLPIACRTRQKASTQTQRDTKTSTILVKGIDNLSAPIAPKRKRSRA----AINTL-ARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQKGNVHPKPSKEEINGMSNSKIKFTQMKSGIKRKILASG-----------QSQKELVEDTTVDHSP-------NHHSAIGTSEDSAVIKAQTAEYTIGKSRSAIT-AAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE----------IRKDGNEF 935
            S S  +H  E  G  VI  S      IDQ H L E ++++ G  +ENK RVG S VRKL  ED +H E  + N  TNN   E + P +   + ELAGLSYV+SQEPGE+SQ  ALDFVD+ LK +VTE DQE    +STG K + +  A+GTQ LAK AN + S  G  G FDWDD +ED GGG+F  R+++  F NDG+R  +S  + +  +HLN N   +V ++ +K EQ             ++K   +  K++DE + +            L+D R+    TGT K+  DMLD+G+DTQ+AA+AME LC+GV + D + N  NQ A+    S  +G       S ++ + KRAS S    + TRQ+ +TKR GT L K  S+   +QS+  +K C ETE                      +  ++  ++V+++  E+ L+R  I E ++C V+A S G    KK   Q+QL  + PIA RTRQ       +    +T   + I++L+     K KR       A   L A++   E    Q    +  K+T  E S+ KI GT TI K N    P     +   + ++  T +  GIKR+  +S            +S++   + +     P       N     G++    V+  Q +E+T GKS +  + +AEGA +N     S ++ C    SA  TP   T  +N ASP+  G EY K S RK    S L KE   +I DGP +A   K+ R+RRD+  V VLFS HLD D+IKQQKK+L RLGASVASS+SDATHF+ D+FVRTRNMLEAIA G+PVVTH WLESCGQASC IDE+NYILRDAKKEKE GFSLPVSLARACQHPLL+G +V+IT NTKPGK++LASLVKAVHG+ V+RIGRS  KD+ +  + +VLSCEEDYA CVPFLEKGA++YSSELLLNGIV QKLE++RH+LF +          +RKD NE+
Sbjct:  233 SQSLKEHTAEDEGVPVIRDSSNFREGIDQEHVLREYNEQMNGLRNENKYRVGSSTVRKLFMED-THAEIKEHNDYTNNAGGEADLPQLLTCNNELAGLSYVNSQEPGESSQANALDFVDRLLKFSVTEFDQEVGFGKSTGEKSRNVSSAKGTQSLAKIAN-LKSVGGERGIFDWDDSREDEGGGEFFSRRKEALFDNDGQR-RKSFSQPRKPQHLNSNGSRAVNKSRDKEEQV-----------IETKFRKNLIKELDEQLNIG-----------LSDGREA---TGTDKEKEDMLDVGLDTQMAAEAMEGLCHGVDVTDSDFNDANQDAKNMSKSYPRGETKIRAHSKQNSLNKRAS-SSNCRVITRQSEKTKRIGTKLNKESSVPVRKQSKNVKKPC-ETELVIAEPKSAKSYTEEHFATNMSENLDITRKVVKQTKEERALKRSDIEEVDKCRVTASSNGGILAKKRRFQDQLGNFTPIAYRTRQCRVANQLKWAGNATNGTEEINDLTEVGTLKGKRKSCTGFDAFEVLNAKERLFELVSNQSGELENVKLTEHEQSNPKITGT-TIVKINELSYPRGRRTHRKVSGQLDGT-VDLGIKRQTRSSACAGSILPALDTRSKRRSFQQSVDKVGPGSAALNCNSVDTNGSAIPKDVVGVQASEHTDGKSDADTSLSAEGAGVNSRLGASPREGCKQSGSACATPANCTTPINAASPICMGDEYRKQSCRKNLSRSSLMKEIYSLIVDGPPTA-AMKDTRRRRDMASVHVLFSHHLDEDIIKQQKKILARLGASVASSISDATHFITDKFVRTRNMLEAIALGRPVVTHLWLESCGQASCFIDEKNYILRDAKKEKEFGFSLPVSLARACQHPLLRGQKVYITSNTKPGKELLASLVKAVHGLVVERIGRSTLKDDKIPDELLVLSCEEDYAVCVPFLEKGATVYSSELLLNGIVTQKLEYERHRLFMDHVKRTRSTIWLRKDSNEY 1187    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RV75 ((PAX-interacting protein {ECO:0000313|EMBL:PSS33934.1}))

HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0
Identity = 428/1012 (42.29%), Postives = 582/1012 (57.51%), Query Frame = 0
 
Query:    1 MSLRRTNNTSYYSMSSSQHEVESSGPSVIDSSLKVLGL-IDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYED-MSHEEGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRA---NRIGSASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLNDA-----RDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHF---LSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDET----------------------EDMCNLHCELVEKSMNEKELERGVIGENERC-VVSAPSGKKTVKKGCVQEQLNTYLPIACRTRQ-KASTQTQ-----------RDTKTSTI--LVKGID---NLSAPIAPKRKRSRAAINTLARKNCTEFKFIQPAHPKKTKVTHTEPSDL---------------KICGTGTIQKGNVHPKPSKEEINGMS---NSKIK----FTQMKSGIKRKILASGQSQKELVEDTTVDHSPNHHSAIGTSEDSAVIKAQTAEYTIGKSRS-------AITAAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE 927
            M+ + TN     S SS QH  E +G +VI +S  V G  +D+     E +++I G  +ENKCRVG S VR+L  ED ++  E  +    +     + P +   D E+AGLSYVDSQEPGE SQ  ALDFVD+FL  NV + DQE +I RSTGGK  P+   +GTQ LAKR    NR G    G FDWD+ +ED GGG+F  K+K AF ++G R   S  + Q L+H +P    ++ E G+  EQ+ +  +V+GL +S S+L+ +K+K+ DE+ KV      +NL K+LN+       DGM  TGT KD  D+ ++G DTQ+AA+AME LC G+   D  N  TNQG +  +    S EK N  +   S +DF+QKR S S  S +  R + QT+   T L+K  +I S ++ R  RK CD                        E++  +  E+ E+   E+ L R    E +RC  ++  SG  ++KK  +QEQ+ T+ PIA RTRQ +A++Q+            R T+   +    +G +   + S+ ++ K K S+   N        E    + +H K +    T   D                ++ G+  +Q  N   +   +E NG S   ++++K       M  G+KRK   S  ++  LV   +VD   +  + +  +     +  +     +   R+        I+  E A+ N   K S  D C P  SA  TP      +N ASP+  G EY K S RK    S L++E + +  +  E   T K+ R+RRD+  V+VLFS HLD D+IK QKK+L RLGASVASS+S+ATHFV D+FVRTRNMLEAIAFGK VVTH WLESC QASC IDER+YILRDAKKEKE GFSLPVSLARACQHPLLQG +VFITP+TKPGKD+LASLV AVHG  V+RIGRSA K++ +  D +V+SCEEDYA CVPFLEKGA++YSSELLLNGIV QKLE++RH+LF +
Sbjct:  197 MAFKVTN-----SQSSKQHTAEDNGITVIRNS-SVFGTEVDREDFSVECNEQIDGLKNENKCRVGSSIVRRLFREDTLAETERPNNYITDAAGGADLPRLPACDNEMAGLSYVDSQEPGELSQANALDFVDRFLTFNVLDFDQEVDIGRSTGGKSNPVSSVKGTQSLAKRTILINRAGER--GVFDWDNSREDEGGGEFFTKKKEAFFDNGDRRKISFTEPQKLRHPDPKGSGAIDEIGDTKEQY-VHRTVSGLVNSGSRLVSNKSKRNDETTKVTETKFKRNLTKELNEQLKIGFSDGMEATGTDKDMLDLQNVGFDTQMAAEAMEVLCFGLDRTDCANKNTNQGIKDIYKDSSSREKKNGAQ---SKKDFLQKR-SNSSRSGVFKRNSYQTRSIRTQLSKASTISSGKRVRNVRKHCDTELPKQELKRAKSNAKGCFATHGFENLNKISSEITEQMEEERTLRRKDTDEVDRCHAIATSSGSLSLKKRHLQEQVGTFTPIARRTRQQRATSQSGAGIASNDFGEIRPTRAIGLNDRTRGCNIGCDASSMLSSKEKSSKLNSNQSVELENVEVIEQEQSHEKLSDTIGTVGIDSLKYERKRRTQRKLSGRLNGSANLQLVN---QFVGQETNGQSLQKSNRLKTNALIPSMDLGLKRKTSESAYAESVLV---SVDKGGSGCAGLKCNFVDDDVVPEDVVGDLASERTCTQIDADTISGGETARGNTKLKVSPGDRCKPSGSATATPINCATPINAASPICMGDEYLKQSCRKNLSRSFLRREINNLFSNVSEPTSTTKDSRRRRDMANVRVLFSHHLDEDIIKHQKKILARLGASVASSISEATHFVTDKFVRTRNMLEAIAFGKAVVTHLWLESCRQASCFIDERSYILRDAKKEKEFGFSLPVSLARACQHPLLQGQKVFITPSTKPGKDVLASLVNAVHGKVVERIGRSAFKEDKILDDLLVISCEEDYALCVPFLEKGAAVYSSELLLNGIVTQKLEYERHRLFVD 1189    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A970 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})

HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0
Identity = 417/1018 (40.96%), Postives = 589/1018 (57.86%), Query Frame = 0
 
Query:   18 QHEVESSGPSVIDSSLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHE--EGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRANRIGSASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLNDA-----RDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCD----------------------ETEDMCNLHCELVEKSMNEKELERGVIGENERCVVSAPSGKKTV-KKGCVQEQLNTYLPIACRTRQKASTQTQRDTKTSTILVKGIDNLSAPIAPKRKRSRAAIN------TLARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQ----------------------KGNVHPKPSK---EEINGMSNSKIKFTQMKS-------GIKRKILASGQS----------------QKELVEDTTVDHSPNHHSAI--GTSEDSAVIKAQTAEYTIGKSRSAIT-AAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE----------IRKDGNEF 935
            +H  E  G   I  S K    IDQ H     +++I G  +ENKCRVG S VRKL  ED   E  +  D N +N     + P +   + EL GLSYV+S EPG++SQT AL FVD+F+K +VTE  QEA   +STGGK K +  A+GTQ LAK AN + S  G  FDWDD  ED GGG+F +K+K AF ++G +  +S  + +  +++N     +  E+ +K EQ D+   + GL  S+S+L+LH     D + +V      +NLIK+L++       DGM   GT +D  DML++G DTQ+AA+AME  C GVG+ D ++N  NQG +    S+ KG       S  +F++ RAS S    + TRQ+ +T+R G  L+K   + S++QS+  +KQC+                       ++++  +  ++V++   E+ L+R  + E ++C VS  S +  + KK  +QE+L +  PIA RTRQ    + ++    S  + K I++L+     K KR R +        + A++  +E    Q    +  K+T       K+ G  T+Q                        N+H   +    +E NG + +++K ++  +       GIKR+  +S  +                Q+ + +  + D   NH+S    G +    V+  Q+++++   + S  T +AEGA+++   + SL++ C    S   +P   T  +   SP+  G EY K S +    SS L KE + +I DGP+     K+ R+RRD+  V+VLFS HLD D+IKQQKK+L RLGASVASS+SDATHF+ D FVRTRNMLEAIAFGKPVVTH WLESCGQASC IDE+N+ILRDAKKEKE GFSLPVSLARACQ PL QG +V ITPNTKPGK++LASLVKAVHG+AV+RIGRSA KD+ +  D +VLSCEEDYA CVPFLEKGA++YSSELLLNGIV QKLE +RH+LFA+          ++KD N++
Sbjct:  254 EHTAEDDGVPFIRDSSKFREEIDQEHVWGVDNEQIDGLRNENKCRVGSSTVRKLFMEDTLAEIKQSNDYN-DNAGVGADLPQLLACNNELEGLSYVNSLEPGDSSQTNALGFVDRFIKFSVTEFYQEASFRKSTGGKSKHVSSAKGTQSLAKIAN-LKSTVGEIFDWDDSCEDEGGGEFFKKKKEAFFDNGGQRQRSFTQPRKPRYVNSEGSEAANESRDKEEQPDIHEKILGLVHSNSRLVLHPEGN-DVTAQVTEIEFRKNLIKELDEQLNAGLSDGMEANGTDQDMTDMLNVGFDTQMAAEAMEVSCYGVGVPDSDSNDANQGVKNVSKSSPKGERKNNAHSKHNFLKTRAS-SSNCGVITRQSKKTERIGAKLSKESFVSSQKQSKLVKKQCNIELVKAELKSAKFNAEECFATNASKNLDKITSKVVKQGKEERALKRSDLDEVDKCHVSLSSSRHILAKKLSLQEELGSSTPIAYRTRQCREAKLKQAGNASNDVRKKINDLTEVGVLKGKRKRCSTGFDASEVSSAKEKFSELGSNQFGKLEMVKLTEHGQLKPKLKGKTTVQVDQLSYPRGRRTHRKFSGQLDGTSNLHGSATASIGQEANGQAIARLKRSKTDAISNYLDLGIKRQTRSSASAGPILPTLDKQSEQRSFQQSVDKAGSGDAGLNHNSVDINGGAIPKDVVGIQSSKHSDENNDSDTTLSAEGARVHARFEASLREGCKKSGSVCASPVNCTTPMKAVSPICMGDEYLKQSCKNLSRSS-LMKEINSLIADGPKPTSAIKDTRRRRDMANVRVLFSHHLDEDIIKQQKKILARLGASVASSISDATHFITDNFVRTRNMLEAIAFGKPVVTHLWLESCGQASCFIDEKNHILRDAKKEKEFGFSLPVSLARACQCPLFQGQKVLITPNTKPGKELLASLVKAVHGLAVERIGRSALKDDKIPDDLLVLSCEEDYAVCVPFLEKGAAVYSSELLLNGIVTQKLEFERHRLFADHVKRTRSTIWLKKDSNQY 1266    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EPD9 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})

HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0
Identity = 412/1022 (40.31%), Postives = 557/1022 (54.50%), Query Frame = 0
 
Query:   16 SSQHEVESSGPSVIDSSLKVL-GLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYED-MSHEEGLDINTNNTDKEENFP--PVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRAN-RIGSASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLND-----ARDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHF---------LSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDE---TEDM-----------CNLHCELVEKSMNEKE--LERGVIGENERCVVSAP-SGKKTVKKGCVQEQLNTYLPIACRTRQKASTQTQR------DTKTSTILVKGIDNLSAPIAPKRKRSRAAINTLARKNCTEFKFIQPAHPKKT--KVTHTEPSDLKICGTGTIQ--KGNVHPKPSKEEIN--------GMSNSKIKFTQMKS-------GIKRKILASG-----------QSQKELVEDTTVDHSPNHHSAIGTSEDSAVIKAQTAEYTIGKSR------SAITAAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKK-----------------------------VLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE 927
            S QH  E +G   +   L      +DQ    EE ++K+KG   ENKC+VG S VR+L  ED ++  +G + + NN D   +    P C +  E+AGLSYVDSQEPG+ SQ  ALD VD++L+ NV + +QE     STG K KP   A+GTQ L K  N +I +     FDWDD +ED GGG+F  K+K AF ++G +  +S+ K +  KHL+      V E  +K +Q D+   V GL +S+S L+   +K+ D++ KV      +NL K+L++     + DGM   GT KD  ++L++G DTQ+AA+AME LC G+ + D +N   +QG +  F          +  KGNFLR           + S S    + T+ + +TK  G  L K  ++ S++Q++  RKQCD     E+M                E +++   E+E  L+R  I   +RC V AP SG K+VKK  + EQL T+ PIA RTRQ+  T   R      D+     L +     S      +   +   + L      E + ++    KK+  KVT T      + G G ++  KG    +   E +N        G S  ++K +++ +       GI++K  +S            QS+  L + +         S    S D  VI          K          + A EGA++N   + S  D C    S + T    T  VN ASP+  G EY K S RK  LS  L KE S ++ +GPE     K+ R+RRD+  V+VLFS HLD D IKQQKK                             VL R GASVASS+S+AT F+ D+FVRTRNMLEAIAFGKPVVTH WLESCG+  C +DERNYILRDAKKEKE GFSLPVSLARA Q PLLQG +V ITPNTKP K+ILASLVKAV+G+A++RIGRSA KD+ +  D +VLSCEEDY  CVPFLEKGA+++SSELLLNGIV QKLE++RH+LFA+
Sbjct:  380 SKQHTAEDNGVVTVTRDLSTFREEVDQEDFQEEYNEKMKGLRDENKCKVGSSTVRRLFLEDTLAEPKGPNDDKNNADGGADLSQLPACGN--EMAGLSYVDSQEPGDLSQANALDVVDRYLQFNVMDFNQEVGFGSSTGQKSKPDSSAKGTQSLVKITNLKITAGEREIFDWDDSREDEGGGEFFTKKKEAFFDNGGQRKRSVSKPR--KHLDSKRNGVVDETRDKEDQQDIHQKVKGLVNSNSGLVSRNSKRNDKTTKVTKTKSKKNLTKELDEPLNIGSSDGMEAIGTDKDMTEVLNVGFDTQMAAEAMEVLCAGLDMADHDNKDIDQGTKNMFEASPRAKKNRAQSKGNFLR-----------KRSVSSSFGVITKNSKKTKSIGNKLRKESTVSSQKQAKNVRKQCDTELVKEEMKKAKSNAEGHFATNRIEKIDREQIEEERALKRNDIDVVDRCHVIAPSSGYKSVKKRSLLEQLGTFTPIARRTRQRRVTNQIRNGIASCDSSERLHLTETRQGYSTGSDAFKMVGKEKFSKLGSNQSRELENVKLTEQKKSHQKVTDT----TTVVGIGPLRNNKGKRTRRKFSELVNQSVGLEADGQSLGRLKRSEISAVSTSIDLGIRKKAWSSACAGPVLRSSDRQSKGSLFQRSVDRGGLGDASLKCNSVDGNVIPKDVVGGFASKQSDRNSDADTMLAGEGAEVNARFEVSPGDRCKQSGSTFTTLVNCTTPVNAASPICKGDEYFKQSCRKN-LSKSLMKEISSLVSNGPEPTSIMKDSRRRRDMANVRVLFSHHLDDDTIKQQKKVVIYGILCSFLDVRQFELKSELIVGFFSQVLARFGASVASSISEATQFITDKFVRTRNMLEAIAFGKPVVTHLWLESCGETGCFMDERNYILRDAKKEKEFGFSLPVSLARASQRPLLQGLKVLITPNTKPSKEILASLVKAVNGLAMERIGRSAFKDDKIPDDLLVLSCEEDYVLCVPFLEKGATVHSSELLLNGIVTQKLEYERHRLFAD 1381    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WUW0 ((uncharacterized protein LOC113736417 {ECO:0000313|RefSeq:XP_027119168.1, ECO:0000313|RefSeq:XP_027119169.1}))

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 369/919 (40.15%), Postives = 529/919 (57.56%), Query Frame = 0
 
Query:   32 SLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHE-EGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRANRIGSASG-GTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLI----KKLNDAR-DGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDETEDMCNL------HCELVEKSMNEKELERGVIGEN----ERCVVSAPSGKKTVKKGCVQEQLNTYLPIACRTRQ--KASTQTQRDTKTSTILVKGIDNLSAPIAPKRKRSRAAINTLARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQKGNVHPKPSKEEINGMSNSKIKFTQMKSGIKRKILASGQSQKELVEDTTVDHSPNHHSAIGTSEDSAVIKAQTAEYTIGKSRSAITAAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKE-DSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE 927
            SLK+   ++Q+HS+E+ D +IK   +EN  ++G SAVRKL  +++  E E  D   N +D     P +  S+ +LAGLSYVDSQEPG+ SQ  ALD VD+FL++N    DQ+    +S   K + +  A+G Q LAK+A    S  G G F+WDD  ED GGG+F +K++  F  +     +S+P S     L   +  ++  + +K +  D    +   F SDS+LL  K  + +ES K       +NL+    ++++DA  + +V+ G  KD PD +D+G DTQ+AADAMEAL   V +  +EN+  N    I  ++       R+  ++    QKR   S  + L TRQ+ + +R G  L++     S +QS+  ++      ++ +L      +   V K +  ++ +R   G +     + + +A +G+K++K+  + E+L +  PIA RTR   KAS     +   S+ L  G+  L       R  +   I    +  C+  K     +PK  +     P   +  G   I +     K SK ++   S ++++    ++ +         SQ +++     D   + H  +   +++ V    +    I        +AEG  +N     S KD     +S   TP  +T  ++ ASP+  G EYHK S RK  L S L KE +SR     P      K+LR+RRD+T V+ +FS+HLD D +KQQKK+L R GA VASS+S+ATHF+ DEFVRTRNMLEAIAFGKPVVTH WLESCGQA+C IDERNYILRDA+KEKE GFS+PVSL+RACQHPLLQG RV ITPNTKPGK+IL SLVKAVHG+AV+R+GRSA KDE +  D ++LSCEEDY  CVPFLEKGA++YSSELLLNGIVIQ+LE++RH+LF +
Sbjct:  240 SLKLTDELNQKHSMEDYDPRIKELGNENTRKLGSSAVRKLFMDEVVSEIEQADDGRNGSDGTGGVPQLA-SEHDLAGLSYVDSQEPGDLSQANALDVVDKFLELNAAGSDQDVTFSKSNRRKSRSVSSAKGIQSLAKKAAVRSSHGGKGIFNWDDDLEDEGGGEFFQKKRELFFENRSLWQRSIPHSTKPLCLTSKSSLTIPLDTDKKKIVDNTRKLKDAFLSDSRLL-SKNSRANESSKPRKASFKKNLLPDMDEEMSDASVERVVDAGAHKDLPDKMDVGFDTQMAADAMEALQFAVSV--KENDCMNGDEGITSVTKSARTDDRSSFNE-SITQKRTC-SSDAELITRQSKKARRTGVKLSRESYSSSVKQSKNLKRSKRAKANLKDLITNGTENLSTVSKVVEPRKEDRVPAGSDVDNINQTLATASAGRKSLKRHPLIEELGSLTPIARRTRASAKASQSKAENNLDSSRLGNGVGKL-------RHNNARKIGQSNQDRCSNVKTFGLEYPKGRRTRSKLPLVSQEAGAQNITRF----KRSKRDVTSSSMNRVENQDERTSV---------SQGKIILADRTDVGSSLHGNLSNIQENVVKSIISNHSGIKIDMDNSRSAEGEIMNGSEDASPKDRRKSGASTSTTPVSFTTPISAASPICMGDEYHKQSCRKNLLGSSLMKELNSRTNTTSPLFTGGVKDLRRRRDMTTVRAMFSRHLDADTVKQQKKILARFGALVASSMSEATHFITDEFVRTRNMLEAIAFGKPVVTHLWLESCGQANCFIDERNYILRDARKEKEFGFSMPVSLSRACQHPLLQGLRVLITPNTKPGKEILGSLVKAVHGLAVERLGRSAWKDERLPDDILILSCEEDYEICVPFLEKGAAVYSSELLLNGIVIQRLEYERHRLFVD 1132    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WN99 ((uncharacterized protein LOC113734012 {ECO:0000313|RefSeq:XP_027116101.1, ECO:0000313|RefSeq:XP_027116102.1}))

HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0
Identity = 370/936 (39.53%), Postives = 538/936 (57.48%), Query Frame = 0
 
Query:   32 SLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHE-EGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRAN-RIGSASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLI----KKLNDAR-DGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLS-----NEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDETEDMCNL------HCELVEKSMNEKELERGVIGEN----ERCVVSAPSGKKTVKKGCVQEQLNTYLPIACRTRQKA-STQTQRDTKT-STILVKGIDNLSAPIAPKRKRSRAAINTLARKNCTEFKFIQPAHPK------KTKVTHTEPSDLKIC----GTGTIQKGNVHPKPSKEEINGMSNSKIKFTQMKSGIKRKILASGQSQKEL--VEDTTVDHSPNHHSAIGTSEDSAVIKAQTAEYTIGKSRSAITAAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKE-DSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE 927
            SLK+    +Q+HS+E+ D +IK   +EN  ++G SAVRKL  +++  E +  D   N++D     P +  S+ +LAGLSYVDSQEPG+ SQ  ALD VD+FL++NV   DQ+    +S   K + +   +G Q LAK+A  R      G F+WDD  ED GGG+F +K+K  F  +     +S+P S     L   +  ++  + ++ +  D   ++   F SDS+LL  K  + +ES K       +NL+    ++++DA  + +V+    KD PD +D+G DTQ+AADAMEAL   V +  +EN+  N    I  ++     +++ +F  ++   R       + S  + L TRQ+ + +R G  L++  +  S +QS+  ++      ++ +L      +   V K +  ++ +R  +G +     + + +A +G+K++K+  + E+L +  PIA RTR  A ++Q++ + K  S+ L  G+  L       R  +   I    +  C+  K     +PK      K  +   E S   I         +   +++P  +++E   +S  KI           +  A G     L  +++  V    ++HS I    D+              SRSA    EG  +N     S KD   P++S   TP  +T  ++ ASP+  G EYHK S RK  L   L KE +SR     P      K+LR+RRD+T V+ +FS+HLD D +KQQKK+L R GA +ASS+S+ATHF+ DEFVRTRNMLEAIAFGKPVVTH WLESCGQA+C IDERNYILRDA+KEKE GFS+PVSL+RACQHPLLQG RV ITPNTKPGK+IL SLVKAVHG+AV+R+GRSA KDE +  D ++LSCEEDY  CVPFLEKGA++YSSELLLNGIVIQ+LE++RH+LF +
Sbjct:  240 SLKLTDEFNQKHSMEDYDPRIKELGNENTRKLGSSAVRKLFMDEVVSEIKQADDGWNSSDGTGGVPQLA-SEHDLAGLSYVDSQEPGDLSQANALDVVDKFLELNVAGSDQDVTFSKSNRRKSRSVSSGKGIQSLAKKAAVRSLHGGKGIFNWDDDLEDEGGGEFFQKKKELFFENRSLRQRSIPHSTKPLCLTSKSSLTIPLDTDEKKIVDNTRNLKDAFLSDSRLL-SKNSRANESSKPRKASFKRNLLPVMDEEMSDASVERVVDAVAHKDLPDKMDVGFDTQMAADAMEALQFAVSV--KENDCMNGDEGITSVTKSARTDDRSSFNESITLKR-------TCSSDAELITRQSKKARRTGVKLSRESNSSSVKQSKNLKRSKRAKANLKDLITNGTENLSTVSKVVEPRQEDRVPVGSDVDNINQTLATASAGRKSLKRHPLIEELGSLTPIAHRTRTSAKASQSKAENKLDSSRLGNGVGKL-------RHNNAMKIGQSNQDRCSNVKTFVLEYPKGRRTRSKLPLASQEASAQNITRFKRSKRDVTSSSMNPVENQDERTSVSGGKIILAD-------RTDAGGSLHGNLSNIQENVVKSIISNHSGIKIDMDN--------------SRSA----EGEIMNGSEDASPKDRRKPEASTSTTPVSFTTPISAASPICMGDEYHKQSCRKNLLGLSLMKELNSRTNTTSPLFTGGVKDLRRRRDMTTVRAMFSRHLDADTVKQQKKILARFGALIASSMSEATHFITDEFVRTRNMLEAIAFGKPVVTHLWLESCGQANCFIDERNYILRDARKEKEFGFSMPVSLSRACQHPLLQGLRVLITPNTKPGKEILGSLVKAVHGLAVERLGRSAWKDERLPDDILILSCEEDYEICVPFLEKGAAVYSSELLLNGIVIQRLEYERHRLFVD 1132    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068TRQ0 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})

HSP 1 Score: 560.066 bits (1442), Expect = 3.473e-180
Identity = 367/929 (39.50%), Postives = 541/929 (58.23%), Query Frame = 0
 
Query:   32 SLKVLGLIDQRHSLEELDDKIKGSSSENKCRVGKSAVRKLLYEDMSHE-EGLDINTNNTDKEENFPPVCNSDMELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRAN-RIGSASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLI----KKLNDAR-DGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLS-----NEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDETEDMCNL------HCELVEKSMNEKELERGVIGEN----ERCVVSAPSGKKTVKKGCVQEQLNTYLPIACRTRQKA-STQTQRDTKT-STILVKGIDNLSAPIAPKRKRSRAAINTLARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQKGNVHPKPSKEEINGMSNSKIKFTQMKSGIKRKILASGQSQKELVEDTTVDHSPNHHSAIGTSEDSAVIKAQTAEYT-----IGKSRSAITAAEGAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKE-DSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAE 927
            SLK+    +Q+HS+E+ D +IK   +EN  ++G SAVRKL  +++  E +  D   N++D     P +  S+ +LAGLSYVDSQEPG+ SQ  ALD VD+FL++NV   DQ+    +S   K + +   +G Q LAK+A  R      G F+WDD  ED GGG+F +K+K  F  +     +S+P S     L   +  ++  + ++ +  D   ++   F SDS+LL  K  + +ES K       +NL+    ++++DA  + +V+    KD PD +D+G DTQ+AADAMEAL   V +  +EN+  N    I  ++     +++ +F  ++   R       + S  + L TRQ+ + +R G  L++  +  S +QS+  ++      ++ +L      +   V K +  ++ +R  +G +     + + +A +G+K++K+  + E+L +  PI  RTR  A ++Q++ + K  S+ L  G+  L       R  +   I    +  C+  K     +PK  +      S L +       +     K SK ++   S + ++    ++ +      SG   K ++ D T   S  H +     E+  V+K+  + ++     +  SRSA    EG  +N     S KD   P++S   TP  +T  ++ ASP+  G EYHK S RK  L   L +E +SR     P      K+LR+RRD+T V+ +FS+HLD D +KQQKK+L R GA +ASS+S+ATHF+ DEFVRTRNMLEAIAFGKPVVTH WLESCGQA+C IDERNYILRDA+KEKE GFS+PVSL+RACQHPLLQG RV ITPNTKPGK+IL SLVKAVHG+AV+R+GRSA KDE +  D ++LSCEEDY  CVPFLEKGA++YSSELLLNGIVIQ+LE++RH+LF +
Sbjct:  240 SLKLTDEFNQKHSMEDYDPRIKELGNENTRKLGSSAVRKLFMDEVVSEIKQADDGWNSSDGTGGVPQLA-SEHDLAGLSYVDSQEPGDLSQANALDVVDKFLELNVAGSDQDVTFSKSNRRKSRSVSSGKGIQSLAKKAAVRSLHGGKGIFNWDDDLEDEGGGEFFQKKKELFFENRSLRQRSIPHSTKPLCLTSKSSLTIPLDTDEKKIVDNTRNLKDAFLSDSRLL-SKNSRANESSKPRKASFKRNLLPVMDEEMSDASVERVVDAVAHKDLPDKMDVGFDTQMAADAMEALQFAVSV--KENDCMNGDEGITSVTKSARTDDRSSFNESITLKR-------TCSSDAELITRQSKKARRTGVKLSRESNSSSVKQSKNLKRSKRAKANLKDLITNGTENLSTVSKVVEPRQEDRVPVGSDVDNINQTLATASAGRKSLKRHPLIEELGSLTPIGHRTRTSAKASQSKAENKLDSSRLGNGVGKL-------RHNNARKIGQSNQDRCSNVKTFVLEYPKGRRTR----SKLPLASQEASAQNITRFKRSKRDVTSSSMNPVENQDERTSV------SGG--KIILADRTDAGSSLHGNLSNIQEN--VVKSIISNHSGIKIDMDNSRSA----EGEIMNGSEDASPKDRRKPEASTSTTPVSFTTPISAASPICMGDEYHKQSCRKNLLGLSLMRELNSRTNTTSPLFTGGVKDLRRRRDMTTVRAMFSRHLDADTVKQQKKILARFGALIASSMSEATHFITDEFVRTRNMLEAIAFGKPVVTHLWLESCGQANCFIDERNYILRDARKEKEFGFSMPVSLSRACQHPLLQGLRVLITPNTKPGKEILGSLVKAVHGLAVERLGRSAWKDERLPDDILILSCEEDYEICVPFLEKGAAVYSSELLLNGIVIQRLEYERHRLFVD 1132    
BLAST of XM_017363877.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LUB7 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7150882.1}))

HSP 1 Score: 521.546 bits (1342), Expect = 3.597e-166
Identity = 355/926 (38.34%), Postives = 509/926 (54.97%), Query Frame = 0
 
Query:   48 LDDKIKGSSSENKCRVGKSAVRKLLYEDMSHEEGLDINTNNTDKEENFPPVCNSD-MELAGLSYVDSQEPGEASQTIALDFVDQFLKVNVTELDQEAEIIRSTGGKLKPLPGARGTQFLAKRAN-RIGSASGGTFDWDDYQED-GGGQFLRKEKGAFSNDGRRAHQSLPKSQDLKHLNPNNCWSVKENGEKGEQHDLCNSVAGLFDSDSKLLLHKTKKIDESMKVAGKFIGQNLIKKLNDARDGMVETGTQKDNPDMLDIGVDTQLAADAMEALCNGVGLNDEENNVTNQGAEIHFLSNEKGNFLRTLVSDRDFVQKRASRSPGSALTTRQTNQTKRYGTGLTKGFSILSEQQSRKARKQCDETE-----------------------DMCNLHCELVEKSMNEKELERGVIGENERC-VVSAPSGKKTVKKGCVQEQLNTYLPIACRTRQKASTQTQRDTKTSTILVKGIDNLSAPIAPKRKRSRAAINTLARKNCTEFKFIQPAHPKKTKVTHTEPSDLKICGTGTIQKGNVHPKPSKEEINGMSNSKIKFTQMKSGIKRKIL--ASGQSQKELVE------DTTVDHSPNHHSAIGTSEDSAVIKAQTAEYTIGK--SRSAITAAE------GAKLNPWSKESLKDICTPKSSAYVTPNIYTKSVNKASPV--GKEYHKPSFRKKPLSSPLKKEDSRIIEDGPESAYTYKELRKRRDITKVQVLFSQHLDGDVIKQQKKVLFRLGASVASSVSDATHFVADEFVRTRNMLEAIAFGKPVVTHFWLESCGQASCLIDERNYILRDAKKEKEIGFSLPVSLARACQHPLLQGCRVFITPNTKPGKDILASLVKAVHGVAVDRIGRSAAKDEMVSSDWIVLSCEEDYADCVPFLEKGASIYSSELLLNGIVIQKLEHKRHQLFAEI 928
            ++++I G   ++ CR G S VR+L  ED+            T+ +E +  + N+D  E+AGLSYVDSQEPGE SQ  AL+FV++F+K +V E  QE E+ RSTGGK K +  A+GTQ L K+ N    +   G FDWDD +ED GGG+F  K+K +F + G +   S P+   +    PN  + ++ +  K        S       + K     TKK+DE + +               + DG   T   KD P+ML+IGVDTQ+AA+AMEALC G+ + + ++N ++QGA+    ++++G   +   S    V K +S SP      R + + K   +   K  ++ S++Q+    ++C ETE                       ++  +  E +E+   E+  +R    E + C V+++ +G  +VKK C+ ++  T+                                  PIA + ++ R   N L      E K +     +K+   H + +D+    + T  KG +     K     +S   I    + + + + ++   +GQS   L         T VD +    ++     D ++      +++I K  SR+A  + +       A+ +   + S +D   P  SA  TP   T  +N ASP+  G EY K S RK    S L KE  R++ +GPE   T K+ R+RRD+  V+ LFS HLD D+IKQQKK+L RLGASVASS+S+ATH+V D+FVRTRNML+AIAFGK VVTH WLESCGQASC IDERNYI+RDAKKEKE GFSLPVSLARACQ PLLQG +V ITPNTKPGK+ILA+LV+AVHG+A++R+GRSA K + +  D +V+SCEEDYA CVPFLE+GA++YSSELLLNGIV QKLE +R    A +
Sbjct:  242 VNEQINGLRDKSNCRAGSSTVRRLFTEDV------------TESKEPYDSLNNADGNEIAGLSYVDSQEPGELSQANALEFVERFIKFDVMEFGQEDELRRSTGGKSKLVSSAKGTQSLVKQTNLEFTARKRGVFDWDDSREDEGGGEFFTKKKESFFDTGGQRKISSPRKSSVI---PN--FGLRLHSSK--------SYNTKKVMEKKSKKKLTKKVDEQLHIG--------------SSDGTEATQADKDVPEMLNIGVDTQIAAEAMEALCFGLDVAERDSNESDQGAKNRCEASDRGEKTKRSQSKEGGVCKTSS-SPSPGDICRNSKKRKSISSTSRKKSAVSSQKQAENITEEC-ETEVVKEALKKSKSNGEGCFGTNRIKNIDKVSSEALEQIEEERAQKRKDTDEVDTCHVIASSNGCVSVKKRCLDDKFGTF---------------------------------TPIARRTRQCRVP-NQL---KAGELKNVNLIEQEKS---HEKFNDM----SATFTKGALGCNRGKRTSRKLSTKSIGSGDLHASVSQSVVQGTNGQSLGRLTRGSINASSTCVDLANKRRASSDRQSDGSLF-----QHSIDKKCSRNAALSVDQNVIPNNAEASTHLEVSPEDRRKPSGSASTTPLNCTTPINDASPICMGDEYFKQSCRKNLSKSFLAKEVDRLMSNGPEPTPTIKDSRRRRDMANVRALFSHHLDEDIIKQQKKILVRLGASVASSISEATHYVTDKFVRTRNMLQAIAFGKSVVTHLWLESCGQASCFIDERNYIVRDAKKEKEFGFSLPVSLARACQRPLLQGQKVLITPNTKPGKEILANLVRAVHGLALERVGRSALKGDNIPDDLLVISCEEDYATCVPFLERGAAVYSSELLLNGIVTQKLEFERLNSIAAM 1077    
Match NameStatsDescription
A0A5B6Z9I1E-Value: 0.000e+0, PID: 42.42BRCT domain-containing protein {ECO:0000259|PROSIT... [more]
A0A5B6Z966E-Value: 0.000e+0, PID: 42.68BRCT domain-containing protein {ECO:0000259|PROSIT... [more]
A0A5J5C333E-Value: 0.000e+0, PID: 43.52BRCT domain-containing protein {ECO:0000259|PROSIT... [more]
A0A2R6RV75E-Value: 0.000e+0, PID: 42.29(PAX-interacting protein {ECO:0000313|EMBL:PSS3393... [more]
A0A5J5A970E-Value: 0.000e+0, PID: 40.96BRCT domain-containing protein {ECO:0000259|PROSIT... [more]
A0A4S4EPD9E-Value: 0.000e+0, PID: 40.31BRCT domain-containing protein {ECO:0000259|PROSIT... [more]
A0A6P6WUW0E-Value: 0.000e+0, PID: 40.15(uncharacterized protein LOC113736417 {ECO:0000313... [more]
A0A6P6WN99E-Value: 0.000e+0, PID: 39.53(uncharacterized protein LOC113734012 {ECO:0000313... [more]
A0A068TRQ0E-Value: 3.473e-180, PID: 39.50BRCT domain-containing protein {ECO:0000259|PROSIT... [more]
A0A834LUB7E-Value: 3.597e-166, PID: 38.34(Uncharacterized protein {ECO:0000313|EMBL:KAF7150... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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