Resource Type:
Polypeptide
Name:
XM_017363531.1
Identifier:
XM_017363531.1-protein
Sequence:
MEDMDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGV
KLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFE
GACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPN
LGRWFNSISAEYGALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNALANGD
VGKVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFAD
RYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQL
MEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEM
IAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPT
YDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRL
NMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFIL
EQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAERVLLMLKDGPDDP
YVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAI
VKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFD
YLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGY
FRCDVPFVRPSKPIVLFAIPDGRQQTK
Sequence Length:
727
Sequence Checksum:
c6be331bd4450103e0057df94a8ff4da
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017363531.1, derives from mRNA, XM_017363531.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314KSQ2 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1179.85 bits (3051), Expect = 0.000e+0
Identity = 566/730 (77.53%), Postives = 640/730 (87.67%), Query Frame = 0
Match: A0A314KSQ2 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1179.85 bits (3051), Expect = 0.000e+0
Identity = 566/730 (77.53%), Postives = 640/730 (87.67%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEY-GALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P D+ PL+ I AK+AG+P+S LS SPP +LLP+G+KLQG + +LRY+ R++ N+ LY+RD ES QIDEWL+YAP+FASGS+FE AC +VDGYLL TFLVG+SLSIAD+A+WSGLA TG+RWESL+ SKKY NL RWFNSI AEY G LNEVTA Y GKKGSGKPT V KEQ GSNA LA NGD K GSR T EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFP+LMEMAEKLIRE KAYVDDTPREQMQKERMDGIESRCRN+SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD+IEGITHALRSSEYHDRN QYYRIQ DMG R+V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW INKK+IDPVCPRHTAV E RVLL L +GP+DP+VRI+P+HKKY GAG+KATTY+K +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLPD++ELV LSL++FDYLITKKKL+EDE+FVDV+NPCT+KE+ A GDSNMRNLK+G++LQLERKGYFRCDVPF+RP+K IVLFAIPDGRQQ
Sbjct: 1 MELKLAFPADTPPLAVIAAAKIAGVPLSTDPTLSPGSPPVILLPSGLKLQGTSVLLRYISRVA-NIPDLYQRDAFESCQIDEWLEYAPIFASGSQFEEACGYVDGYLLQSTFLVGHSLSIADIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILAEYDGVLNEVTATYMGKKGSGKPTVSKV-KEQDGSNANLAKVNGDSTDKEKSGSRPTFEVDLPEAEAGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYKGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPKLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAIEGITHALRSSEYHDRNDQYYRIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWAINKKLIDPVCPRHTAVIEERRVLLTLSNGPNDPFVRIVPKHKKYAGAGEKATTYSKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPDSDELVKLSLVDFDYLITKKKLEEDENFVDVVNPCTRKETPALGDSNMRNLKRGDVLQLERKGYFRCDVPFLRPTKSIVLFAIPDGRQQ 728
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3Y052 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1174.46 bits (3037), Expect = 0.000e+0
Identity = 561/730 (76.85%), Postives = 635/730 (86.99%), Query Frame = 0
Match: A0A1S3Y052 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1174.46 bits (3037), Expect = 0.000e+0
Identity = 561/730 (76.85%), Postives = 635/730 (86.99%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEY-GALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA-----NGDVGKVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P D+ PL+ I AK+AG+P+S LS SPP +LLP G+KLQG + +LRY+ R++ N+ +Y+RD ESSQIDEWLDYAP+FASGS+FE AC +VDGYLL RTFLVGYSLSIAD+A+WSGLA G+RWESL+ SKKY NL RWFNSI AEY G LNEVTA Y GKKGSGKPT V KEQ GSNA LA + D K GSR T EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFP+LMEMA KLIRE KAYVDDTPREQMQKERMDGIESRCRN+ VEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD++EGITHALRSSEYHDRN QYYRIQ DMG R+V+IYEFSRLN+VYTLLSKRKLLWFVQNG VDGWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW INKKIIDPVCPRHTAV E RVLL L +GPD+P+VRI+P+HKKY GAG+KATTY+K +W+D DA IS EE+TLMDWGN IVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LSL++FDYLITKKKL+EDE+FVDV+NPCT+KE+ A GDSNMRNLK+G++LQLERKGYFRCDV F+RP+K IVLFAIPDG+QQ
Sbjct: 1 MELKLAFPADTPPLAVIAAAKIAGVPLSTDPTLSPGSPPIILLPNGLKLQGTSVLLRYISRVA-NIPNMYQRDAFESSQIDEWLDYAPIFASGSQFEEACGYVDGYLLQRTFLVGYSLSIADIAVWSGLAGAGKRWESLRSSKKYQNLARWFNSIFAEYDGVLNEVTATYMGKKGSGKPTVSKV-KEQHGSNANLAKVNCDSTDKEKSGSRPTFEVDLPEAEAGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYKGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPKLMEMAGKLIREGKAYVDDTPREQMQKERMDGIESRCRNNGVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAVEGITHALRSSEYHDRNDQYYRIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVDGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWAINKKIIDPVCPRHTAVIEERRVLLTLSNGPDEPFVRIVPKHKKYAGAGEKATTYSKRIWIDYDDAISISVNEEVTLMDWGNTIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSLVDFDYLITKKKLEEDENFVDVVNPCTRKETPALGDSNMRNLKRGDVLQLERKGYFRCDVSFIRPTKSIVLFAIPDGKQQ 728
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XT83 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0
Identity = 561/730 (76.85%), Postives = 637/730 (87.26%), Query Frame = 0
Match: A0A1U7XT83 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0
Identity = 561/730 (76.85%), Postives = 637/730 (87.26%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEY-GALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P D+ PL+ I AK+AG+P+S LS SPP +LLP G+KLQG + +LRY+ R++ N+ LY+RD ES QIDEWL+YAP+FASG +FE AC +VDGYLL TFLVG+ LSIAD+A+WS LA TG+RWESL+ SKKY NL RWFNSI AEY G LNEVTA Y GKKGSGKPT V KEQ GSNA LA NGD K GSR T EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFP+LMEMAEKLIRE KAYVDDTPREQMQKERMDGIESRCRN+SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD++EGITHALRSSEYHDRN QYYRIQ DMG R+V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW INKK+IDPVCPRHTAV E RVLL L +GPDDP+VRI+P+HKKY GAG+KATTY+K +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LSL++FDYLITKKKL+EDE+FVDV+NPCT+KE++A GDSNMRNLK+G++LQLERKGYFRCDVPF+RP+K +VLFAIPDGRQQ
Sbjct: 1 MELKLAFPADTPPLAVIAAAKIAGVPLSTDPTLSPGSPPIILLPNGLKLQGTSVLLRYISRVA-NIPDLYQRDAFESCQIDEWLEYAPIFASGPQFEEACGYVDGYLLQCTFLVGHILSIADIAVWSSLAGTGKRWESLRSSKKYQNLARWFNSILAEYDGVLNEVTATYMGKKGSGKPTVSKV-KEQDGSNANLAKVNGDSTDKEKSGSRPTFEVDLPEAEAGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYKGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPKLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAVEGITHALRSSEYHDRNDQYYRIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWAINKKLIDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYSKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSLVDFDYLITKKKLEEDENFVDVVNPCTRKETSALGDSNMRNLKRGDVLQLERKGYFRCDVPFLRPTKSVVLFAIPDGRQQ 728
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4DHA4 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0
Identity = 561/730 (76.85%), Postives = 637/730 (87.26%), Query Frame = 0
Match: A0A1S4DHA4 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1170.99 bits (3028), Expect = 0.000e+0
Identity = 561/730 (76.85%), Postives = 637/730 (87.26%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEY-GALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P D+ PL+ I AK+AG+P+S LS SPP +LLP G+KLQG + +LRY+ R++ N+ LY+RD ES QIDEWL+YAP+FASG +FE AC +VDGYLL TFLVG+ LSIAD+A+WS LA TG+RWESL+ SKKY NL RWFNSI AEY G LNEVTA Y GKKGSGKPT V KEQ GSNA LA NGD K GSR T EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFP+LMEMAEKLIRE KAYVDDTPREQMQKERMDGIESRCRN+SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD++EGITHALRSSEYHDRN QYYRIQ DMG R+V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW INKK+IDPVCPRHTAV E RVLL L +GPDDP+VRI+P+HKKY GAG+KATTY+K +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LSL++FDYLITKKKL+EDE+FVDV+NPCT+KE++A GDSNMRNLK+G++LQLERKGYFRCDVPF+RP+K +VLFAIPDGRQQ
Sbjct: 1 MELKLAFPADTPPLAVIAAAKIAGVPLSTDPTLSPGSPPIILLPNGLKLQGTSVLLRYISRVA-NIPDLYQRDAFESCQIDEWLEYAPIFASGPQFEEACGYVDGYLLQCTFLVGHILSIADIAVWSSLAGTGKRWESLRSSKKYQNLARWFNSILAEYDGVLNEVTATYMGKKGSGKPTVSKV-KEQDGSNANLAKVNGDSTDKEKSGSRPTFEVDLPEAEAGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYKGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPKLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAVEGITHALRSSEYHDRNDQYYRIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWAINKKLIDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYSKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSLVDFDYLITKKKLEEDENFVDVVNPCTRKETSALGDSNMRNLKRGDVLQLERKGYFRCDVPFLRPTKSVVLFAIPDGRQQ 728
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BD11 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1169.45 bits (3024), Expect = 0.000e+0
Identity = 563/726 (77.55%), Postives = 637/726 (87.74%), Query Frame = 0
Match: A0A5B7BD11 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1169.45 bits (3024), Expect = 0.000e+0
Identity = 563/726 (77.55%), Postives = 637/726 (87.74%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEYGA-LNEVTAQYAGKKGSGKPTT-KSVEKEQKGSNALANGDVGKVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQT 726
M+++L + DS PLS I AK+AGIPI S L+S SPP L+ G+KL G N +LRYLGR + ++ LY+RD E QIDEWL+YAP+ SGSEFEGAC +VDGYLL RTFLVG SLSIAD+AIWSGLA TG RWESL+ SKKY NL RWFNS+S EYGA L+EVTA Y GK+G GKP K+ EKEQK N N + GK G RST EVDLP+AE G V LRFAPEPSGYLHIGHSKAALLNQYFA RY G++I+RFDDTNPAKESNEFV+NLL DI+TLGI Y VTYTSDYFPQLMEM+EKLI E KAYVDDTPREQMQKERMDGIES+CR++S EEN+KLWKEMIAGSERGL+CC+RGKLDMQDPNKS+RDPVYYRCNP+ HHRIG++YKIYPTYDFACPFVD++EGITHALRSSEYHDRNAQY+RIQ DMG+R+V+IYEFSRLN+VYTLLSKRKLLWFVQNGKV+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAV E RVLL L DGP+ P+VRIIPRHKK+ GAG+KATTYTK +W+D ADA+C+S EEITLMDWGNAI+KEI KD+DG++ LTGVL+L GSVKTTKLKLTWLP+T+ELV L+L+EFDYLITKKKL+E EDF+DVLNPCT+K++AA GDSNMRNL++GE+LQLERKGYFRCDVPFVRPSKPIVL AIPDGRQQT
Sbjct: 1 MEVRLLFSADSPPLSVIVAAKIAGIPIGTDSTLTSGSPPTLIFSNGLKLHGTNVLLRYLGR-AASIPNLYERDAFECGQIDEWLEYAPVLGSGSEFEGACNYVDGYLLKRTFLVGDSLSIADIAIWSGLAGTGLRWESLRKSKKYQNLVRWFNSLSMEYGAVLDEVTATYVGKRGLGKPIAPKAKEKEQKSVNVDIN-EKGKAG-RSTFEVDLPDAEVGNVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPAKESNEFVENLLKDIETLGIKYAAVTYTSDYFPQLMEMSEKLIIEGKAYVDDTPREQMQKERMDGIESKCRSNSPEENMKLWKEMIAGSERGLLCCLRGKLDMQDPNKSVRDPVYYRCNPVPHHRIGSRYKIYPTYDFACPFVDALEGITHALRSSEYHDRNAQYHRIQEDMGVRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGKVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEEQRVLLTLTDGPEVPFVRIIPRHKKHEGAGEKATTYTKGIWIDHADAECVSVDEEITLMDWGNAIIKEIKKDQDGNVTQLTGVLHLQGSVKTTKLKLTWLPETSELVNLTLVEFDYLITKKKLEEGEDFLDVLNPCTRKDTAALGDSNMRNLQRGEVLQLERKGYFRCDVPFVRPSKPIVLLAIPDGRQQT 723
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0V0ISA2 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1162.9 bits (3007), Expect = 0.000e+0
Identity = 557/729 (76.41%), Postives = 632/729 (86.69%), Query Frame = 0
Match: A0A0V0ISA2 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1162.9 bits (3007), Expect = 0.000e+0
Identity = 557/729 (76.41%), Postives = 632/729 (86.69%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEYGALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P DS PL+ I AK+AG+PIS L+ S P + L G+KLQG +LR++ R++ N+ LY+RD +ESSQIDEWL+YAP+FASGS+FE AC +VDGYLL TFLVG+SLSIAD+A+WSGLA TG+RWESL+ SKKY NL RWFNSI AEYG LNEVTA Y GKKGS KPT V KEQ+GSNA LA NGD K + T+EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFPQLMEMAEKLI E KAYVDDTPREQMQKERMDGIESRCRN+SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD+ EGITHALRSSEYHDRN QYY IQ DMG R+V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW NKKIIDPVCPRHTAV E RVLL L +GPDDP+VRI+P+HKKY GAG+KATTYTK +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LS+++FDYLITKKKL+EDE+FVDV+NPCT+KE+ A GDSNMRNL++G++LQLERKGYFRCDVPF+RP KPIVLFAIPDG+QQ
Sbjct: 1 MELKLSFPADSPPLAVIAAAKIAGVPISTDPTLTPGSTPIIHLDNGLKLQGNFVLLRHISRVA-NIPDLYQRDAIESSQIDEWLEYAPIFASGSQFEEACXYVDGYLLQHTFLVGHSLSIADIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILAEYGVLNEVTATYVGKKGSVKPTASKV-KEQQGSNANLAKVNGDAADKEKESRKPTSEVDLPEAEVGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYQGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPQLMEMAEKLIXEGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAFEGITHALRSSEYHDRNDQYYWIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWATNKKIIDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYTKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSVVDFDYLITKKKLEEDENFVDVVNPCTRKETPALGDSNMRNLQRGDVLQLERKGYFRCDVPFLRPQKPIVLFAIPDGKQQ 727
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2CBU4 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1162.13 bits (3005), Expect = 0.000e+0
Identity = 556/729 (76.27%), Postives = 633/729 (86.83%), Query Frame = 0
Match: A0A6N2CBU4 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1162.13 bits (3005), Expect = 0.000e+0
Identity = 556/729 (76.27%), Postives = 633/729 (86.83%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEYGALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P DS PL+ I TAK+AG+PIS L+ S P + + G+KL+G +LRY+ R++ N+ LY+RD ESSQIDEWL+YAP+FASGS+FE AC +VDGYLL TFLVG+SLSIAD+A+WSGLA TG+RWESL+ SKKY NL RWFNSI +EYG LNEVTA Y GKKGSGKPT V KEQ+GSNA LA NGD K G + T+EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFPQLMEMAEKLIRE KAYVDDTPREQMQKERMDGIESRCR +SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD+ EGITHALRSSEYHDRN QYY IQ DMG +V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW NKKIIDPVCPRHTAV E RVLL L +GPDDP+VRI+P+HKKY GAG+KATTYTK +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LS+++FDYLITKKKL+EDE+FVDV+NPCT+KE+ A GDSNMRNL++G++LQLERKGYF+CDVPF+RP KPIVLFAIPDG+QQ
Sbjct: 1 MELKLSFPADSPPLAVIATAKIAGVPISTDPTLTPGSTPIIHIENGLKLRGNFVLLRYISRVA-NIPDLYQRDACESSQIDEWLEYAPIFASGSQFEEACGYVDGYLLQHTFLVGHSLSIADIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILSEYGVLNEVTATYVGKKGSGKPTASKV-KEQQGSNANLAKVNGDAADKEKEGRKPTSEVDLPEAEVGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYQGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPQLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRKNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAFEGITHALRSSEYHDRNDQYYWIQTDMGFSKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWATNKKIIDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYTKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSVVDFDYLITKKKLEEDENFVDVVNPCTRKETPALGDSNMRNLQRGDVLQLERKGYFKCDVPFLRPQKPIVLFAIPDGKQQ 727
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1BJW9 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1160.59 bits (3001), Expect = 0.000e+0
Identity = 557/729 (76.41%), Postives = 632/729 (86.69%), Query Frame = 0
Match: M1BJW9 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1160.59 bits (3001), Expect = 0.000e+0
Identity = 557/729 (76.41%), Postives = 632/729 (86.69%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEYGALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P DS PL+ I AK+AG+PIS L+ S P + L G+KL G +LR++ R++ N+ LY+RD +ESSQIDEWL+YAP+FASGS+FE AC +VDGYLL TFLVG+SLSIAD+A+WSGLA TG+RWESL+ SKKY NL RWFNSI AEYG LNEVTA Y GKKGS KPT V KEQ+GSNA LA NGD K + T+EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFPQLMEMAEKLIRE KAYVDDTPREQMQKERMDGIESRCRN+SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD+ EGITHALRSSEYHDRN QYY IQ DMG R+V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW NKKIIDPVCPRHTAV E RVLL L +GPDDP+VRI+P+HKKY GAG+KATTYTK +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LS+++FDYLITKKKL+EDE+FVDV+NPCT+KE+ A GDSNMRNL++G++LQLERKGYFRCDVPF+RP KPIVLFAIPDG+QQ
Sbjct: 1 MELKLSFPADSPPLAVIAAAKIAGVPISTDPTLTPGSTPIIHLDNGLKLWGNFVLLRHISRVA-NIPDLYQRDAIESSQIDEWLEYAPIFASGSQFEEACGYVDGYLLQHTFLVGHSLSIADIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILAEYGVLNEVTATYVGKKGSVKPTASKV-KEQQGSNANLAKVNGDAADKEKESRKPTSEVDLPEAEVGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYQGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPQLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAFEGITHALRSSEYHDRNDQYYWIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWATNKKIIDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYTKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSVVDFDYLITKKKLEEDENFVDVVNPCTRKETPALGDSNMRNLQRGDVLQLERKGYFRCDVPFLRPQKPIVLFAIPDGKQQ 727
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7EQU1 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1157.51 bits (2993), Expect = 0.000e+0
Identity = 554/729 (75.99%), Postives = 631/729 (86.56%), Query Frame = 0
Match: A0A3Q7EQU1 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1157.51 bits (2993), Expect = 0.000e+0
Identity = 554/729 (75.99%), Postives = 631/729 (86.56%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEYGALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA-LA--NGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
M+LKL +P DS PL+ I AK+AG+PIS L++ S P + + G+KL+G +LRY+ R++ N+ LY+RD ESSQIDEWL+YAP+FASGS+FE AC +VDGYLL TFLVG+SLSIAD+A+WSGLA TG+RWESL+ SKKY NL RWFNSI EYG LNEVTA Y GKKG GKPT V KEQ+GSNA LA NGD K G + T+EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY G++IIRFDDTNP KESNEFVDNLL DI+TLGI Y+ VTYTSDYFPQLMEMAEKLIRE KAYVDDTPREQMQKERMDGIESRCRN+SVEEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD+ EGITHALRSSEYHDRN QYY IQ DMG +V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW NKKI+DPVCPRHTAV E RVLL L +GPDDP+VRI+P+HKKY GAG+KATTYTK +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ HL+G+L+L GSVKTTKLKLTWLP+++ELV LS+++FDYLITKKKL+EDE+FVDV+NPCT+KE+ A GDSNMRNL++G++LQLERKGYFRCDVPF+RP K IVLFAIPDG+QQ
Sbjct: 1 MELKLSFPADSPPLAVIAAAKIAGVPISTDPTLTTGSTPIMHIDNGLKLRGNFVLLRYISRVA-NIPDLYQRDACESSQIDEWLEYAPIFASGSQFEEACGYVDGYLLQHTFLVGHSLSIADIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILTEYGVLNEVTATYVGKKGPGKPTASKV-KEQQGSNANLAKVNGDAADKEKEGRKPTSEVDLPEAEVGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYQGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPQLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAFEGITHALRSSEYHDRNDQYYWIQTDMGFSKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWATNKKIVDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYTKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIRKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSVVDFDYLITKKKLEEDENFVDVVNPCTRKETPALGDSNMRNLQRGDVLQLERKGYFRCDVPFLRPQKRIVLFAIPDGKQQ 727
BLAST of XM_017363531.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3BUQ8 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1155.58 bits (2988), Expect = 0.000e+0
Identity = 555/729 (76.13%), Postives = 628/729 (86.15%), Query Frame = 0
Match: A0A2G3BUQ8 (Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00017458} (6.1.1.17 {ECO:0000256|ARBA:ARBA00012835}))
HSP 1 Score: 1155.58 bits (2988), Expect = 0.000e+0
Identity = 555/729 (76.13%), Postives = 628/729 (86.15%), Query Frame = 0
Query: 4 MDLKLHYPPDSLPLSAITTAKLAGIPISVHSDLSSPSPPALLLPTGVKLQGINAILRYLGRISKNVQGLYKRDDLESSQIDEWLDYAPLFASGSEFEGACKFVDGYLLHRTFLVGYSLSIADLAIWSGLAVTGRRWESLKDSKKYPNLGRWFNSISAEYGALNEVTAQYAGKKGSGKPTTKSVEKEQKGSNA---LANGDVG---KVGSRSTNEVDLPNAEGGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKIIIRFDDTNPAKESNEFVDNLLIDIKTLGINYKDVTYTSDYFPQLMEMAEKLIREKKAYVDDTPREQMQKERMDGIESRCRNHSVEENIKLWKEMIAGSERGLMCCVRGKLDMQDPNKSLRDPVYYRCNPMAHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYRIQNDMGLREVYIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVSAE-RVLLMLKDGPDDPYVRIIPRHKKYPGAGDKATTYTKSVWLDLADAKCISAGEEITLMDWGNAIVKEISKDEDGSIKHLTGVLNLAGSVKTTKLKLTWLPDTNELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAYGDSNMRNLKKGEILQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQ 725
MDLKL +P DS PLS I AK+AG+PI+ L+ SPP + L G+KLQG +LRY+ R++ N+ LY+RD +ESSQIDEWLDYAP+FASGS+FE AC +VDGYL TFLVG+SLSIAD+A+WSGLA TG+RWESL+ SKKY NL RWFNSI AEY LNEV A Y GKKGSGKPT V KEQ+G+ A NGD K G R T+EVDLP AE GKV LRFAPEPSGYLHIGHSKAALLNQYFA+RY+G++IIRFDDTNP KESNEFVDNLL DI+TLGI YK VTYTSDYFPQLMEMAEKLIRE KAYVDDTPREQMQKER +GIESRCRN+S+EEN+KLWKEMIAGSERG MCCVRGKLDMQDPNKS+RDPVYYRCN HHRIG KYK+YPTYDFACPFVD+ EGITHALRSSEYHDRN QYY IQ DMG ++V+IYEFSRLN+VYTLLSKRKLLWFVQNG V+GWDDPRFPTVQGIVRRGL+IEALIQFILEQGASKNLNLMEWDKLW NKKIIDPVCPRHTAV E RVLL L +GPDDP+VRIIP+HKKY GAG+KATTYTK +W+D DA IS EE+TLMDWGNAIVKEI KD++G++ +L+G+L+L GSVKTTKLKLTWLP+++ELV LSL++FDYLITKKKL+EDE+FVDV+NPCTKKE+ A GDS+MRNLK+G++LQLERKGYFRCDVPF RP +PIVLFAIPDG+ Q
Sbjct: 1 MDLKLSFPADSPPLSVIVAAKIAGVPIAADPTLAPASPPIIHLHNGLKLQGTCVLLRYISRVA-NIPDLYQRDAIESSQIDEWLDYAPIFASGSQFEEACGYVDGYLPQHTFLVGHSLSIADIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILAEYDVLNEVLATYTGKKGSGKPTASKV-KEQQGAKANLSKGNGDATAKEKEGWRQTSEVDLPEAEVGKVRLRFAPEPSGYLHIGHSKAALLNQYFAERYNGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYKTVTYTSDYFPQLMEMAEKLIREGKAYVDDTPREQMQKERKEGIESRCRNNSIEENLKLWKEMIAGSERGTMCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAFEGITHALRSSEYHDRNDQYYWIQTDMGFKKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWATNKKIIDPVCPRHTAVIEERRVLLTLSNGPDDPFVRIIPKHKKYAGAGEKATTYTKRIWIDYDDAVSISVNEEVTLMDWGNAIVKEIQKDQEGNVTNLSGILHLEGSVKTTKLKLTWLPESDELVKLSLVDFDYLITKKKLEEDENFVDVVNPCTKKETPALGDSSMRNLKRGDVLQLERKGYFRCDVPFSRPQEPIVLFAIPDGKPQ 727
| Match Name | Stats | Description |
|---|---|---|
| A0A314KSQ2 | E-Value: 0.000e+0, PID: 77.53 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A1S3Y052 | E-Value: 0.000e+0, PID: 76.85 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A1U7XT83 | E-Value: 0.000e+0, PID: 76.85 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A1S4DHA4 | E-Value: 0.000e+0, PID: 76.85 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A5B7BD11 | E-Value: 0.000e+0, PID: 77.55 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A0V0ISA2 | E-Value: 0.000e+0, PID: 76.41 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A6N2CBU4 | E-Value: 0.000e+0, PID: 76.27 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| M1BJW9 | E-Value: 0.000e+0, PID: 76.41 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A3Q7EQU1 | E-Value: 0.000e+0, PID: 75.99 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
| A0A2G3BUQ8 | E-Value: 0.000e+0, PID: 76.13 | Glutamyl-tRNA synthetase {ECO:0000256|ARBA:ARBA000... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |