XM_017360385.1

Resource Type: 
Polypeptide
Name: 
XM_017360385.1
Identifier: 
XM_017360385.1-protein
Sequence: 
MEPTDSGLGTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKR
WRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWK
RVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTW
NEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKS
HVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDS
DMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTR
PPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDES
VLSCKSVAI
Sequence Length: 
359
Sequence Checksum: 
985e1b816f9e951ef95062f8f28de1e7
View location in JBrowse: 
DCARv2_Chr7:24615475..24616670-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017360385.1, derives from mRNA, XM_017360385.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251RSU1 ((Putative SKP1 interacting partner 4 {ECO:0000313|EMBL:OTF87422.1}))

HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0
Identity = 259/360 (71.94%), Postives = 316/360 (87.78%), Query Frame = 0
 
Query:    1 MEPTDS-GLGTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            ME T+S   G++QT   +SS++ GLPDDIA+ CLARIPRKYH+ LKCVS++WR+LVC +EW +YRQKHNL+ETWIYALC+DKSE L  Y+LDP++ KKGWKR+ +L PR L+RKG+GF+VLG  IY +GGCGW+EDATDEVYCYDA+ N W+EA PLST RCYFACEA+DDKMYAIGG+GS SSDPHSWDTFDS TN W SH+DPNIVP+IEDS+VLDGKIYIRCG+SAVSSHVYAVVY+PLNGTWQH D+DM SGWRGPG+VVD   YVLDQSSGTR+M+W+KD+REW A GRL+ +LTRPPC+LVAIGK ++VVGKGLSTVVF+V  AA ++DG+LV++S+P+L SD+ V+SCKSV++
Sbjct:    1 MELTESVPEGSSQTVITQSSLISGLPDDIALTCLARIPRKYHSLLKCVSRKWRDLVCSEEWYTYRQKHNLSETWIYALCKDKSEQLCCYVLDPDLPKKGWKRIPDLSPRCLKRKGVGFEVLGKTIYFLGGCGWVEDATDEVYCYDASRNAWSEASPLSTPRCYFACEAMDDKMYAIGGLGSKSSDPHSWDTFDSTTNSWTSHMDPNIVPEIEDSLVLDGKIYIRCGLSAVSSHVYAVVYDPLNGTWQHADADMMSGWRGPGIVVDNTLYVLDQSSGTRVMMWRKDSREWEAFGRLAAILTRPPCRLVAIGKKMFVVGKGLSTVVFDVDKAA-NIDGMLVTTSVPKLPSDDDVISCKSVSL 359
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZFD2 (F-box domain-containing protein {ECO:0000259|Pfam:PF00646})

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 263/359 (73.26%), Postives = 308/359 (85.79%), Query Frame = 0
 
Query:    1 MEPTDSG-LGTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVA 358
            MEP +SG   ++Q    +S ++ GLPDDIA+ C+AR+PRKYHA LKCVSKRWREL+C + W SYR+KHNL ETWIYA CRDK E LS Y+LDPN+SK+ WKRVQ +PP SL+RKGMGF+VLG K+YL+GGCGW+EDATDEVYCYDA  NTW+EA PLSTARCYFACE LD+K+YAIGG+GS SSDPHSWDT+D  TN W+SH DPN+VPDIEDS+V DGKIYIRCG SAVSSH  AVVYEP NGTWQH D+DM SGWRGP VVVDG  YVLDQSSGTRLM+W+KD REWVAVGRLSPLLTRPPCQLVAI ++I+V+GKGLSTVV +VGN AG + G++VSSS+P++TSD+ V+SCK VA
Sbjct:    9 MEPVESGSEDSSQNFVVQSPLICGLPDDIALFCIARVPRKYHALLKCVSKRWRELLCSEGWHSYRRKHNLNETWIYAFCRDKFEQLSCYVLDPNLSKRCWKRVQGIPPCSLKRKGMGFEVLGKKVYLLGGCGWVEDATDEVYCYDATMNTWSEAAPLSTARCYFACEVLDEKIYAIGGLGSNSSDPHSWDTYDPHTNSWRSHSDPNVVPDIEDSIVFDGKIYIRCG-SAVSSH--AVVYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDRREWVAVGRLSPLLTRPPCQLVAIEENIFVIGKGLSTVVLDVGN-AGHVGGVMVSSSVPKITSDDDVISCKLVA 363
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B864 ((Putative F-box/kelch-repeat protein SKIP4 {ECO:0000313|EMBL:MPA64564.1}))

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 257/343 (74.93%), Postives = 300/343 (87.46%), Query Frame = 0
 
Query:   17 RSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            +S ++ GLPDDI++ CLAR+PRKYHA LKCVSKRWRELVC +EW SYR+KHNL ETWIYALCRDK E LS Y+LDP +SK+ WKR+Q L P SL+RKGMGF+VLG K+YL+GGCGW+EDATDEVYCYDA  NTW+EA PLSTARCYFACE LD+K+YAIGG+GS SSD HSWD +D  TN W+SH DPNIVPDIEDS+VLD KIYIRCG  AVSSHVYAVVYEP NGTWQH D+DM SGWRGP VV+DG  YVLDQSSGTR+M+W+KD REWVAVGRLSPLLTRPPC+LVAI K+I+V+GKGLSTVV +VG+ AG+M G++VSSS+P+LTSD+ V+SCK VA+
Sbjct:   15 QSPLICGLPDDISLFCLARVPRKYHALLKCVSKRWRELVCSEEWHSYRRKHNLDETWIYALCRDKFEQLSCYVLDPKLSKRCWKRIQGLRPCSLKRKGMGFEVLGKKVYLLGGCGWVEDATDEVYCYDATMNTWSEAAPLSTARCYFACEVLDEKIYAIGGLGSNSSDSHSWDIYDPHTNSWRSHSDPNIVPDIEDSIVLDRKIYIRCGSFAVSSHVYAVVYEPSNGTWQHADADMVSGWRGPAVVIDGTLYVLDQSSGTRMMMWQKDRREWVAVGRLSPLLTRPPCRLVAIEKNIFVIGKGLSTVVLDVGD-AGNMGGVMVSSSVPKLTSDDDVISCKLVAV 356
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A498KNR2 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 251/357 (70.31%), Postives = 299/357 (83.75%), Query Frame = 0
 
Query:    3 PTDSGLGTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            P D     +QT+  +  +L GLPDDIA+ CLAR+PRKYH  LKCVSKRWR+LVC +EW SYR+KH L ETWIYALCRDK + L FY+LDPN S++ WK V  LPPR ++RKGMGF+V+G+K+YL+GGCGW EDATDEVYCYDA+ N W+EA PLSTARCYFACE LDDK+Y+IGG+GS SS PHSWD +D CTN WK H DPNIVP+IEDSVV+ GKIYIRCG SAV+SHV+AVVYEP +GTWQH DS+M SGWRGP VVVDG  YVLDQSSGTRLM+W+K+TREW+ VGRLS LLTRPPCQLVAIGK  YVVGKGLSTV+F+V N AG+M+G++VSSS+P+L S+  V+ CK ++I
Sbjct:  421 PGDGSDVISQTELTQEPLLCGLPDDIALFCLARVPRKYHTLLKCVSKRWRDLVCSEEWHSYRRKHKLDETWIYALCRDKLDRLCFYVLDPNSSRRSWKLVHGLPPRIMKRKGMGFEVIGNKVYLLGGCGWCEDATDEVYCYDASLNAWSEASPLSTARCYFACEILDDKIYSIGGLGSISSYPHSWDIYDPCTNSWKFHSDPNIVPEIEDSVVMAGKIYIRCGTSAVTSHVHAVVYEPSSGTWQHADSEMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWEKETREWIPVGRLSSLLTRPPCQLVAIGKKFYVVGKGLSTVMFDVEN-AGNMEGVMVSSSIPKLNSNIDVIGCKCLSI 776
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0G7S3 ((SKP1 interacting partner 4 {ECO:0000313|EMBL:GFZ06855.1}))

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 257/360 (71.39%), Postives = 303/360 (84.17%), Query Frame = 0
 
Query:    1 MEPTDSGLG-TNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            ME T SG   ++Q    +S +L GLPDD+A+ CLAR+PRKYHA LKCVSKRWRE VC +EW SYR+KHNL ETWIYALCRDK E L  Y+LDPN S++ WKR Q+LP   L+RKGMGF+VLG K+YL+GGCGW+EDAT+E+YCYDA+ NTWNEA PLSTARC+F  E LD+K+YAIGG+GS SSDPHSWDT+D  TN WKS  DPN+VP+IEDS+VLDGKIYIRCG S+VSSHVYAVVYEP +GTWQH D+DM SGWRGP VVVDG  YVLDQSSGTRLM+W KD +EWVAVGRLSP L RPPC+LVAI KSIYV+GKGLSTVV NVG+ AG++ G++VSSS+ +LTSD+ V+SCK +AI
Sbjct:    1 MERTQSGDAVSSQIQIAQSPLLCGLPDDVALFCLARVPRKYHAVLKCVSKRWREFVCSEEWHSYRRKHNLDETWIYALCRDKFEQLCCYVLDPNASRRCWKRAQDLPSCCLKRKGMGFEVLGKKVYLVGGCGWVEDATNEIYCYDASMNTWNEAAPLSTARCFFTSEVLDNKIYAIGGLGSNSSDPHSWDTYDPHTNSWKSQSDPNVVPEIEDSIVLDGKIYIRCGSSSVSSHVYAVVYEPSSGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWLKDMKEWVAVGRLSPQLMRPPCRLVAIEKSIYVIGKGLSTVVLNVGD-AGNVGGVMVSSSVTKLTSDDDVISCKCLAI 359
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LL85 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7138874.1}))

HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0
Identity = 257/360 (71.39%), Postives = 307/360 (85.28%), Query Frame = 0
 
Query:    1 MEPTDSGL-GTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            M+ T+SG  G+   +  +  ++ GLPDDIA+LCLAR+PRKYHA L+CVSKRWRELV  +EW SYR+KHNL ETWIYALCRDK + L  Y+LDPN  K+ WKR+Q+LPP SL+RKGMGF+VLG KIYL+GGCGW++DAT EVYCYDAA N WNEA PLSTARCYFA E L++K+YAIGG+GS S+DP+SWDT+D  T+ W+S  DPN+VPDIEDS+VLDGKIYIRCG SAVSSHVYAVVYEP NGTWQH D+DMASGWRGP VV+DG  +VLDQSSG RLM+W+KD REWVAVGRLS LLTRPPC+LVAI KSI+V+G+GLSTVV NVGN AG+ +G++VSSS+ +LTSD+ V+SCK VAI
Sbjct:    1 MDHTESGAEGSGNMELAQFPLICGLPDDIALLCLARVPRKYHALLRCVSKRWRELVSSEEWLSYRRKHNLFETWIYALCRDKFDQLCCYVLDPNAPKRCWKRIQDLPPSSLKRKGMGFEVLGKKIYLLGGCGWVQDATHEVYCYDAAINAWNEASPLSTARCYFASEVLNEKIYAIGGLGSNSTDPNSWDTYDPQTDTWRSQSDPNLVPDIEDSIVLDGKIYIRCGSSAVSSHVYAVVYEPSNGTWQHADTDMASGWRGPAVVIDGTLFVLDQSSGIRLMMWQKDRREWVAVGRLSALLTRPPCRLVAIEKSIFVIGRGLSTVVLNVGN-AGNGEGVMVSSSVTKLTSDDDVISCKCVAI 359
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q8Y9 ((F-box/kelch-repeat protein {ECO:0000313|EMBL:PSS04348.1}))

HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0
Identity = 257/360 (71.39%), Postives = 304/360 (84.44%), Query Frame = 0
 
Query:    1 MEPTDSGLG-TNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            ME T SG   ++Q    +S +L GLPDD+A+ CLAR+PRKYHA LKCVSKRWRE VC +EW SYR+KHNL ETWIYALCRDK E L  Y+LDPN S++ WKRVQ+LP   L+RKGMGF+VLG  +YL+GGCGW+EDAT+E+YCYDA+ NTWNEA PLSTARC+FA E LD+K+YAIGG+GS SSDPHSWDT+D  TN WKS  DPN+VP+IEDS++LDGKIYIRCG S+VSSHVYAVVYEP +GTWQH D+DMASGWRG  VVVDG  YVLDQSSGTRLM+W KD +EWVAVGRLSP L RPPC+LVAI KSIYV+GKGLSTVV NVG+ AG++ G++VSSS+ +LTSD+ V+SCK +AI
Sbjct:    1 MERTQSGDAVSSQIQIAQSPLLCGLPDDVALFCLARVPRKYHAVLKCVSKRWREFVCSEEWHSYRRKHNLDETWIYALCRDKFEQLCCYVLDPNASRRCWKRVQDLPSCCLKRKGMGFEVLGKTVYLVGGCGWVEDATNEIYCYDASMNTWNEAAPLSTARCFFASEVLDNKIYAIGGLGSNSSDPHSWDTYDPHTNSWKSQSDPNVVPEIEDSIILDGKIYIRCGSSSVSSHVYAVVYEPSSGTWQHADADMASGWRGLAVVVDGTLYVLDQSSGTRLMMWLKDMKEWVAVGRLSPQLMRPPCRLVAIEKSIYVIGKGLSTVVLNVGD-AGNVGGVMVSSSVTKLTSDDDVISCKCLAI 359
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5U1C6 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})

HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0
Identity = 248/351 (70.66%), Postives = 297/351 (84.62%), Query Frame = 0
 
Query:    9 GTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            G ++ D  + S++ GLPDDIA+ CLAR+PRKYH  LKCVSKRWR+LVC +EW SYRQKH L ETWIYALCRDK + L  Y+LDPN S+K WK V  LPPR L+RKGMGF+VLG+K+YL+GGCGW EDAT EVYCYDA+ N W+EA PLSTARCYFACE LD K+Y+IGG+GS SSDPHSWD +D CT+ WK H D NIVP+IEDSVV+DGKIYIRCG SAV+SHVYAVVYEP +GTWQH D+D+ +GW+GP VVVDG  YVLDQSSGTRLM+W+K++REW+ VGRLS LLTRPPCQLVAIGK  YVVGKGLSTV+F+V N AG+M+G++VSSS+P+L SD+ V+ CK ++I
Sbjct:  457 GISEMDLSQQSLISGLPDDIALFCLARVPRKYHTLLKCVSKRWRDLVCSEEWHSYRQKHKLDETWIYALCRDKLDRLCCYVLDPNSSRKSWKLVHGLPPRVLKRKGMGFEVLGNKVYLLGGCGWCEDATGEVYCYDASLNAWSEASPLSTARCYFACEVLDGKIYSIGGLGSNSSDPHSWDIYDPCTDSWKFHSDTNIVPEIEDSVVMDGKIYIRCGTSAVTSHVYAVVYEPSSGTWQHADADIVAGWQGPAVVVDGTLYVLDQSSGTRLMIWQKESREWIPVGRLSSLLTRPPCQLVAIGKKFYVVGKGLSTVMFDVEN-AGNMEGVMVSSSIPKLNSDDDVIRCKCLSI 806
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A124SDK6 ((F-box domain, cyclin-like protein {ECO:0000313|EMBL:KVH97237.1}))

HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0
Identity = 256/360 (71.11%), Postives = 304/360 (84.44%), Query Frame = 0
 
Query:    1 MEPTDSG-LGTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRLTSDESVLSCKSVAI 359
            ME  +SG  G+ +T   +SS++ GLPDDIA+ CLARIPR+YH+ LKCVS++WR+LV  +EW SYRQKHNLAETWIYALC+DK E L  Y+LDPNM KKGWKR+ +L P   +RKG+GF+VLG  IY +GGCGWIEDATDEVYCYDA+ N W+EA PLSTARCYFACEA+D KMYAIGG+GS SSDPHSWDTFDS  N W SH+DPN+VP+IEDS+VLDGKIYIRCG SAVSSH+YAVVY+PLNGTWQH DSDM SGWRGP +VV+   YVLDQSSGTR+M+W+KDTREW A GRLS +LTRPPC+L AIG  I+VVGKGLSTV F+V  AA +MDG+LVS+S P+L SD+ V+SCKSV++
Sbjct:    1 MELMESGSEGSCETFFTQSSLISGLPDDIALTCLARIPRRYHSLLKCVSRKWRDLVYSEEWHSYRQKHNLAETWIYALCKDKLEQLCCYVLDPNMPKKGWKRIPDLSPSCSKRKGVGFEVLGRNIYFLGGCGWIEDATDEVYCYDASRNAWSEASPLSTARCYFACEAIDGKMYAIGGLGSKSSDPHSWDTFDSNMNSWASHMDPNVVPEIEDSLVLDGKIYIRCGSSAVSSHIYAVVYDPLNGTWQHADSDMVSGWRGPAIVVNETLYVLDQSSGTRVMVWRKDTREWEAFGRLSSILTRPPCRLAAIGNKIFVVGKGLSTVAFDVDKAA-NMDGVLVSTSAPKLPSDDDVISCKSVSL 359
[Close]
BLAST of XM_017360385.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7MSA0 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4091068.1}))

HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0
Identity = 248/352 (70.45%), Postives = 303/352 (86.08%), Query Frame = 0
 
Query:    9 GTNQTDPERSSILYGLPDDIAILCLARIPRKYHASLKCVSKRWRELVCGQEWQSYRQKHNLAETWIYALCRDKSENLSFYMLDPNMSKKGWKRVQNLPPRSLRRKGMGFDVLGSKIYLMGGCGWIEDATDEVYCYDAATNTWNEAPPLSTARCYFACEALDDKMYAIGGIGSGSSDPHSWDTFDSCTNCWKSHVDPNIVPDIEDSVVLDGKIYIRCGISAVSSHVYAVVYEPLNGTWQHVDSDMASGWRGPGVVVDGNFYVLDQSSGTRLMLWKKDTREWVAVGRLSPLLTRPPCQLVAIGKSIYVVGKGLSTVVFNVGNAAGSMDGLLVSSSLPRL-TSDESVLSCKSVAI 359
            G+NQT   +SS++ GLPDDIA+ CLARIPR+YH+ LKCVS+ WR+LVC ++WQSYR+KHNL ETWIYALC+DK E L  Y+LDPN+ KKGWKR+ +LPP  L+RKG+GF+VLG  IY +GGCGWIEDATDEVY YDA+ N W+E+ PLSTARCYFACE++DDKMYAIGG+GS SSDPHSWDTFDS TN W SH+DPN+VP+IEDSV+L+GKIYI+CG SAVSSHVYAVVY+PLNGTWQH DSDM  GWRGP +VV+   YVLDQSSGTR+M W+KD REW A GRLS +LTRPPC++V IGK I+VVGKGLSTVVF+V  AA ++DG+LV++S+P+L  SD+ V+SCKS+++
Sbjct:   37 GSNQTVSTQSSLINGLPDDIAVTCLARIPRRYHSLLKCVSRTWRDLVCSKQWQSYREKHNLTETWIYALCKDKMEQLCCYVLDPNLPKKGWKRIHDLPPHCLKRKGVGFEVLGKNIYFLGGCGWIEDATDEVYSYDASRNAWSESSPLSTARCYFACESMDDKMYAIGGLGSKSSDPHSWDTFDSNTNTWTSHMDPNVVPEIEDSVILNGKIYIKCGSSAVSSHVYAVVYDPLNGTWQHADSDMVCGWRGPAIVVEDTLYVLDQSSGTRVMTWRKDKREWEAFGRLSAVLTRPPCRVVGIGKKIFVVGKGLSTVVFDVDKAA-NVDGVLVTTSVPKLPASDDDVISCKSLSL 387
Match NameStatsDescription
A0A251RSU1E-Value: 0.000e+0, PID: 71.94(Putative SKP1 interacting partner 4 {ECO:0000313|... [more]
A0A5J4ZFD2E-Value: 0.000e+0, PID: 73.26F-box domain-containing protein {ECO:0000259|Pfam:... [more]
A0A5B7B864E-Value: 0.000e+0, PID: 74.93(Putative F-box/kelch-repeat protein SKIP4 {ECO:00... [more]
A0A498KNR2E-Value: 0.000e+0, PID: 70.31Cyclic nucleotide-binding domain-containing protei... [more]
A0A7J0G7S3E-Value: 0.000e+0, PID: 71.39(SKP1 interacting partner 4 {ECO:0000313|EMBL:GFZ0... [more]
A0A834LL85E-Value: 0.000e+0, PID: 71.39(Uncharacterized protein {ECO:0000313|EMBL:KAF7138... [more]
A0A2R6Q8Y9E-Value: 0.000e+0, PID: 71.39(F-box/kelch-repeat protein {ECO:0000313|EMBL:PSS0... [more]
A0A6J5U1C6E-Value: 0.000e+0, PID: 70.66Cyclic nucleotide-binding domain-containing protei... [more]
A0A124SDK6E-Value: 0.000e+0, PID: 71.11(F-box domain, cyclin-like protein {ECO:0000313|EM... [more]
A0A6S7MSA0E-Value: 0.000e+0, PID: 70.45(Uncharacterized protein {ECO:0000313|EMBL:CAB4091... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.