Resource Type:
Polypeptide
Name:
XM_017362758.1
Identifier:
XM_017362758.1-protein
Sequence:
MYWWRKLSVGDSRSPSLSISFSDDVPSKSGIFRRRAWSFKPQNCLLTSRA
KKQRPLSAISMMRRSPSNGYSIAPQPLPLPELATLLRQEAAHPSNNSVSV
PLPSPPASKSREDREKSDAHRRDGDALPLTSGISSKIASQGTLASRRSPG
RPYGTEMTRNNKLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFH
NWSAPELHSPDMILGHAHPYQPFEKTGISADNSPIHIQKMNFGHSSISPQ
GVVSPLNRKPADTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAK
QGKSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECI
RQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYL
EYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKG
ANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNE
SDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPET
LSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAPLGAEYPIHR
IDKAQVSSAESAQRKVLNSENRKTGGEIAELKVTPRLSTSSLDGLSISNQ
SGVGHTMDYSSPAASPSSSKKIGRTRTQ
Sequence Length:
678
Sequence Checksum:
344a286e4e399fa2ccd5aa43f18245f5
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017362758.1, derives from mRNA, XM_017362758.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6R5Q2 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSS21339.1}))
HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 325/546 (59.52%), Postives = 385/546 (70.51%), Query Frame = 0
Match: A0A2R6R5Q2 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSS21339.1}))
HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 325/546 (59.52%), Postives = 385/546 (70.51%), Query Frame = 0
Query: 72 IAPQPLPLPELATLLRQEAAHPSNNSVS-----VPLPSP--PASKSREDREKSDAHRRD---GDALPLTSGISSKIASQ---------GTLASRRSPGRPYGTEMTRNNK-LNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQPF-EKTGISADNSPIHIQKMNFGHSSISPQGVVSPLNRKPA-DTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAKQGK----SHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAP 591
+ PQPLPLPELA LLR++AA S ++ + +PLPSP P S+S E+RE+ D D G A P SG K+A T R+SP + G E +++ ++VP+S P S+FSSP++SP + + SH++SP WSAPE+ DM LG Y F EKT S D+SP+H ++ S+ SP G SPL++K + +T++ DS+ Q NVHPLPLP A++ SQ + AK S W KGKLIGRGTFGSVYV S+RETGALCAMKEVEL D KSAE I+QLEQEI++L QLKHPNIV YYGSE + DRFYIYLEYVHPGS+ YIRDHCGA+TE +VRNFTRHILSGL YLHSTKTIHRDIKGANLLVDA+GVVKLADFGMAKHLSG AANLSLKGSPYWMAPELLQ MQ ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKVL+E+P IPETLS EGKDFL CCFRRNPA+RP+A MLL+HRF+KNS Q P
Sbjct: 83 VIPQPLPLPELAVLLRRDAAAGSCSTSTSLVNNIPLPSPKEPPSRSGEERERDDGLILDANGGGATP-GSGFGGKVACHDSRKTKEHANTRPFRKSPKKLNGVERFQDSYVISVPISAPTSTFSSPAMSPQRSAGDIFTSHYMSP---QVWSAPEMPPLDMNLGLGFSYLMFPEKTAFSVDSSPLHSPSVSPCRSTRSPTGPTSPLHKKLSLETTSAWCDSNGQANVHPLPLPRGATSPSQLTSISQITAKPDLMPIISQWQKGKLIGRGTFGSVYVASNRETGALCAMKEVELCFEDPKSAESIKQLEQEIKVLSQLKHPNIVHYYGSEIID---------------DRFYIYLEYVHPGSINKYIRDHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDAFGVVKLADFGMAKHLSGPAANLSLKGSPYWMAPELLQSVMQKDASSDLALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVLRESPPIPETLSSEGKDFLHCCFRRNPADRPTASMLLKHRFLKNSPQLDMP 609
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0F7K0 ((Mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|EMBL:GFY94209.1}))
HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0
Identity = 343/634 (54.10%), Postives = 417/634 (65.77%), Query Frame = 0
Match: A0A7J0F7K0 ((Mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|EMBL:GFY94209.1}))
HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0
Identity = 343/634 (54.10%), Postives = 417/634 (65.77%), Query Frame = 0
Query: 72 IAPQPLPLPELATLLRQEAAHPSNNSV---------SVPLPSP--PASKSREDREKSDAHRRD---GDALPLTSGISSKIASQ--------GTLASRRSPGRPYGTEMTRNNK-LNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSP-DMILGHAHPY-QPFEKTGISADNSPIHIQKMNFGHSSISPQGVVSPLNRKPA-DTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAKQGK----SHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQ----------------DKAPLGAEYPIHRIDKAQVSSAESAQRKVLNSENRKTGGEIAELKVTPRLS-TSSLDGLSISNQSGVGHTMD 658
+ PQPLPLPELA LLR++AA S++ ++PLPSP P S E+RE++D D G A P SG + + T R+SP + G E ++N ++VP+S P S+FSSP++SP + + SH++SP WSAPE+ P DM LG Y EKT S D+SP+H +++ S+ SP G SPL++K + +T++ RD + Q NVHPLPLPP A++ SQ + AK S W KGKLIGRGTFGSVYV S+RETGALCAMKEVEL D KSAE I+QLEQEI++L QLKHPNIVQYYGSE + DRFYIYLEYVHPGS+ YIRDHCGA+TE +VRNFTRHILSGL YLHSTKTIHRDIKGANLLV+A GVVKLADFGMAKHLSG AANLSLKGSPYWMAPELLQ MQ ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKVL+E+P IPETLS EGKDFL+CCFRRNPA+RP+A LLEHRF+KNS Q DK E PI+++D +S + N +++ E +EL PR S S+L+ L + GHT +
Sbjct: 84 VIPQPLPLPELAVLLRRDAAATSSSPSPSPSPSPVNNIPLPSPKEPPSGGGEERERADGLILDANGGGATP-GSGFGRFVCNDSRKTKEHANTRPFRKSPQKLNGVERFQDNYVISVPISAPTSAFSSPAMSPQRSAGDIFTSHYMSP---QVWSAPEMPPPLDMNLGLGFSYLMSPEKTAFSVDSSPLHSPRVSPRRSTRSPTGPTSPLHKKLSLETTSAWRDGNGQANVHPLPLPPGATSPSQPTSISQITAKPDLMPIISQWQKGKLIGRGTFGSVYVASNRETGALCAMKEVELCFEDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEVID---------------DRFYIYLEYVHPGSIDKYIRDHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNASGVVKLADFGMAKHLSGPAANLSLKGSPYWMAPELLQSVMQKDASSDLALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVLRESPPIPETLSAEGKDFLRCCFRRNPADRPTASKLLEHRFLKNSPQLDMPACTQALNGMKLMDKTESSREPPIYKLDHLLLSPDAQRGKLANNETGQRSYHETSELTAPPRHSPRSTLEALPSLSPPRSGHTTN 698
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6R6D2 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSS21564.1}))
HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0
Identity = 344/637 (54.00%), Postives = 424/637 (66.56%), Query Frame = 0
Match: A0A2R6R6D2 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSS21564.1}))
HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0
Identity = 344/637 (54.00%), Postives = 424/637 (66.56%), Query Frame = 0
Query: 72 IAPQPLPLPELATLLRQEAAHPSNNSV-----------SVPLPSP--PASKSREDREKSDAHRRD---GDALPLTSGISSKIASQ--------GTLASRRSPGRPYGTEMTRNNK-LNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSP-DMILGHAHPY-QPFEKTGISADNSPIHIQKMNFGHSSISPQGVVSPLNRKPA-DTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAKQGK----SHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQ----------------DKAPLGAEYPIHRIDKAQVSSAESAQRKVLNSEN-RKTGGEIAELKVTPRLS-TSSLDGLSISNQSGVGHTMD 658
+ PQPLPLPELA LLR++AA S++ ++PLPSP P S+ E+RE++D D G A P SG + + T R+SP + G E ++N ++VP+S P S+FSSP++SP + + SH++SP WSAPE+ P DM LG Y EKT S D+SP+H +++ S+ SP G SPL++K + +T++ RD + Q NVHPLPLPP A++ SQ + AK S W KGKLIGRGTFGSVYV S+RETGALCAMKEVEL D KSAE I+QLEQEI++L QLKHPNIVQYYGSE + DRFYIYLEYVHPGS+ YIRDHCGA+TE +VRNFTRHILSGL YLHSTKTIHRDIKGANLLV+A GVVKLADFGMAKHLSG AANLSLKGSPYWMAPELLQ MQ ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKVL+E+P IPETLS EGKDFL+CCFRRNPA+RP+A LLEHRF++NS Q DK E PI+++D + S ++ + K+ N+E +++ E +EL PR S S+L+ L + GHT +
Sbjct: 84 VIPQPLPLPELAVLLRRDAAAASSSPSPSPSPSPSPVNNIPLPSPKEPPSRGGEERERADGLLLDANVGGATP-GSGFGRFVCNDSRKTKEHANTRLFRKSPQKLNGVERFQDNYVISVPISAPTSAFSSPAMSPQRSAGDIFTSHYMSP---QVWSAPEMPPPLDMNLGFGFSYLMSPEKTAFSVDSSPLHSPRVS-PRSTRSPTGPTSPLHKKLSLETTSAWRDGNGQANVHPLPLPPGATSPSQPTSISQITAKPDLMPIISQWQKGKLIGRGTFGSVYVASNRETGALCAMKEVELCFEDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEVID---------------DRFYIYLEYVHPGSINKYIRDHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNASGVVKLADFGMAKHLSGPAANLSLKGSPYWMAPELLQSVMQKDASSDLALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVLRESPPIPETLSSEGKDFLRCCFRRNPADRPTASKLLEHRFLRNSPQLDMPACTQALNGMKLMDKTESSREPPIYKLDHL-LPSPDAQRGKLANNETGQRSYHETSELTAAPRHSPRSTLEALPSLSPPRSGHTTN 699
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B8G2 ((Putative mitogen-activated protein kinase kinase kinase YODA isoform X2 {ECO:0000313|EMBL:MPA63723.1}) (2.7.11.25 {ECO:0000313|EMBL:MPA63723.1}))
HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0
Identity = 320/542 (59.04%), Postives = 372/542 (68.63%), Query Frame = 0
Match: A0A5B7B8G2 ((Putative mitogen-activated protein kinase kinase kinase YODA isoform X2 {ECO:0000313|EMBL:MPA63723.1}) (2.7.11.25 {ECO:0000313|EMBL:MPA63723.1}))
HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0
Identity = 320/542 (59.04%), Postives = 372/542 (68.63%), Query Frame = 0
Query: 71 SIAPQPLPLPELATLLRQEAAHPSNNSVSVPLPSPPASKSR--EDREKSDAHRRDGDALPLTSGISSKIASQG------------TLASRRSPGRPYGTEMTRNN-KLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQ-PFEKTGISADNSPIHIQKMNFGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAK----QGKSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAP 591
S+ PQPLPLPELA LLR++A S N VPLPSP + SR E+RE++D R G+ +T+ +S T +SR+ P G R+N +LNVP+S P S FSSP+LSP + + SH+ SP F WSAPE+ D L P Q EKT S DNSP+H ++ ++ S G SPL N+ +T+T+ + + Q +VHPLPLPP A+ SQ L + AK K W KGKLIGRGTFGSVYV ++ ETGALCAMKEVEL P D SAECI+QLEQEI++L QLKHPNIVQYYGSE V D+F IYLEYVHPGS+ Y+ +HCGAITE +VRNFTRHILSGL YLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQA+ LSLKGSPYWMAPELLQ Q ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYE AAMFKVL+ETP IPE LS EGKDFL+CCF RNPAERPSA LLEH F+KNSQQ P
Sbjct: 87 SVGPQPLPLPELAMLLRRDANSTSGN---VPLPSPKEAPSRGGEERERADGLIRVGNGDGVTTSSGGLGSSSASQDARKNTDHAETRSSRKVPQELRGLGRIRDNYRLNVPISAPTSPFSSPTLSPKRSTRDIFVSHYTSPQVFQVWSAPEMPYSDTTLCLGFPQQMSSEKTAFSFDNSPLHSPIVSPCPNTRSSSGPASPLHNKLSLETATSWHECNAQASVHPLPLPPGAAMPSQQALVSQVTAKPESIAMKCQWQKGKLIGRGTFGSVYVATNTETGALCAMKEVELFPEDPTSAECIKQLEQEIKVLSQLKHPNIVQYYGSEMVE---------------DKFCIYLEYVHPGSINKYVTEHCGAITESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQASKLSLKGSPYWMAPELLQSVGQKDTSSDLALAVDIWSLGCTIIEMLNGKPPWSEYEAAAAMFKVLRETPHIPEKLSSEGKDFLRCCFCRNPAERPSASNLLEHPFLKNSQQLDVP 610
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B4K5 ((Putative mitogen-activated protein kinase kinase kinase YODA isoform X3 {ECO:0000313|EMBL:MPA63722.1}) (2.7.11.25 {ECO:0000313|EMBL:MPA63722.1}))
HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0
Identity = 320/542 (59.04%), Postives = 372/542 (68.63%), Query Frame = 0
Match: A0A5B7B4K5 ((Putative mitogen-activated protein kinase kinase kinase YODA isoform X3 {ECO:0000313|EMBL:MPA63722.1}) (2.7.11.25 {ECO:0000313|EMBL:MPA63722.1}))
HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0
Identity = 320/542 (59.04%), Postives = 372/542 (68.63%), Query Frame = 0
Query: 71 SIAPQPLPLPELATLLRQEAAHPSNNSVSVPLPSPPASKSR--EDREKSDAHRRDGDALPLTSGISSKIASQG------------TLASRRSPGRPYGTEMTRNN-KLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQ-PFEKTGISADNSPIHIQKMNFGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAK----QGKSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAP 591
S+ PQPLPLPELA LLR++A S N VPLPSP + SR E+RE++D R G+ +T+ +S T +SR+ P G R+N +LNVP+S P S FSSP+LSP + + SH+ SP F WSAPE+ D L P Q EKT S DNSP+H ++ ++ S G SPL N+ +T+T+ + + Q +VHPLPLPP A+ SQ L + AK K W KGKLIGRGTFGSVYV ++ ETGALCAMKEVEL P D SAECI+QLEQEI++L QLKHPNIVQYYGSE V D+F IYLEYVHPGS+ Y+ +HCGAITE +VRNFTRHILSGL YLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQA+ LSLKGSPYWMAPELLQ Q ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYE AAMFKVL+ETP IPE LS EGKDFL+CCF RNPAERPSA LLEH F+KNSQQ P
Sbjct: 87 SVGPQPLPLPELAMLLRRDANSTSGN---VPLPSPKEAPSRGGEERERADGLIRVGNGDGVTTSSGGLGSSSASQDARKNTDHAETRSSRKVPQELRGLGRIRDNYRLNVPISAPTSPFSSPTLSPKRSTRDIFVSHYTSPQVFQVWSAPEMPYSDTTLCLGFPQQMSSEKTAFSFDNSPLHSPIVSPCPNTRSSSGPASPLHNKLSLETATSWHECNAQASVHPLPLPPGAAMPSQQALVSQVTAKPESIAMKCQWQKGKLIGRGTFGSVYVATNTETGALCAMKEVELFPEDPTSAECIKQLEQEIKVLSQLKHPNIVQYYGSEMVE---------------DKFCIYLEYVHPGSINKYVTEHCGAITESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQASKLSLKGSPYWMAPELLQSVGQKDTSSDLALAVDIWSLGCTIIEMLNGKPPWSEYEAAAAMFKVLRETPHIPEKLSSEGKDFLRCCFCRNPAERPSASNLLEHPFLKNSQQLDVP 610
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EUR6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0
Identity = 332/606 (54.79%), Postives = 397/606 (65.51%), Query Frame = 0
Match: A0A4S4EUR6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0
Identity = 332/606 (54.79%), Postives = 397/606 (65.51%), Query Frame = 0
Query: 85 LLRQEAAHPSNNS---VSVPLPSP---PASKSREDREKSDAHRRDG-DALPLTSGISSKIASQG---------TLASRRSPGRPYGTEMTR-----NNKLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQPF-EKTGISADNSPIHIQKMNFGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAKQG----KSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAPLGA----------------EYPIHRIDKAQVSSAESAQR-KVLNSENRKTGGEIAELKVTPRLSTSSLDGLS 646
LLR N++ V+VPLPSP P S+ E+RE++DA A+P S AS+G T SR +P G E + N +NVP+S PAS FSSP++SP + + H+++P AF WS+P++ DM +G YQ + EKT +S DNSP+H ++ + SP G SPL N+ + RDS+ Q NVHPLPLPP A+T SQ P+ AK KS W KGKLIGRGTFGSVYV S+RETGALCAMKEVEL P D KSAE I+QLEQEI++L QLKHPNIVQYYGSE + GDRFYIYLEYVHPGS+ Y+ +HCGAITE +VR+FTRHILSGL YLHSTKTIHRDIKGANLLVD+ GVVKLADFGMAKHLSG AANLSLKGSPYWMAPELLQ MQ + D+ALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKV++E+P+IPETLSPEGKDFL+ CF RNPAERPSA MLLEHRF+KN QQ P E P H++++ VS R K N+E R+ A + +PR + +L LS
Sbjct: 92 LLRHATVESHNSNSIPVNVPLPSPKEPPCSRYGEERERADAAAVTTPTAIP---TFESSFASRGFRRNKEHADTQRSRMTPQELSGIERFQESYGINYGINVPISAPASVFSSPAMSPQRSTRDIYPYHYMTPQAFQVWSSPDMPPLDMNVGLRFSYQMYPEKTALSVDNSPLHSPSVSPCRTR-SPSGPPSPLHNKLSIEIPIAPRDSNAQANVHPLPLPPGATTPSQQTSVPQVTAKPDSMPKKSQWQKGKLIGRGTFGSVYVASNRETGALCAMKEVELCPDDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEII---------------GDRFYIYLEYVHPGSINKYVHEHCGAITECVVRSFTRHILSGLAYLHSTKTIHRDIKGANLLVDSNGVVKLADFGMAKHLSGPAANLSLKGSPYWMAPELLQSVMQKDVSSDVALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVMRESPSIPETLSPEGKDFLRSCFCRNPAERPSASMLLEHRFLKNPQQLDVPTCTQALNAMKLTDIALSPRELPSHKLEQLVVSPVAQTNRVKPANNETRQQSDLTAVPRHSPRSTLDALPSLS 678
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I885 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 332/612 (54.25%), Postives = 397/612 (64.87%), Query Frame = 0
Match: A0A7J7I885 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 332/612 (54.25%), Postives = 397/612 (64.87%), Query Frame = 0
Query: 83 ATLLRQEAAHPSNNS---VSVPLPSP---PASKSREDREKSDAHRRDG-DALPLTSGISSKIASQG---------TLASRRSPGRPYGTEMTR-----NNKLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQPF-EKTGISADNSPIHIQKMNFGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQTNVHPLPLPPPASTASQSVLSPKFAAKQG----KSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKH----LSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAPLGA----------------EYPIHRIDKAQVSSAESAQR-KVLNSENRKTGGEIAELKVTPRLSTSSLDGLS 646
A LLR N++ V+VPLPSP P S+ E+RE++DA A+P S AS+G T SR +P G E + N +NVP+S PAS FSSP++SP + + H+++P AF WS+P++ DM +G YQ + EKT +S DNSP+H ++ + SP G SPL N+ + RDS+ Q NVHPLPLPP A+T SQ P+ AK KS W KGKLIGRGTFGSVYV S+RETGALCAMKEVEL P D KSAE I+QLEQEI++L QLKH NIVQYYGSE + GDRFYIYLEYVHPGS+ Y+ +HCGAITE +VR+FTRHILSGL YLHSTKTIHRDIKGANLLVD+ GVVKLADFGMAKH LSG AANLSLKGSPYWMAPELLQ MQ + D+ALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKV++E+P+IPETLSPEGKDFL+ CF RNPAERPSA MLLEHRF+KN QQ P E P H++++ VS R K N+E R+ A + +PR + +L LS
Sbjct: 152 AMLLRHATVESHNSNSIPVNVPLPSPKEPPCSRYGEERERADAAAVTTPTAIPT---FESSFASRGFRRNKEHADTQRSRMTPQELSGIERFQESYGINYGINVPISAPASVFSSPAMSPQRSTRDIYPYHYMTPQAFQVWSSPDMPPLDMNVGLRFSYQMYPEKTALSVDNSPLHSPSVSPCRTR-SPSGPPSPLHNKLSIEIPIAPRDSNAQANVHPLPLPPGATTPSQQTSVPQVTAKPDSMPKKSQWQKGKLIGRGTFGSVYVASNRETGALCAMKEVELCPDDPKSAESIKQLEQEIKVLSQLKHANIVQYYGSEII---------------GDRFYIYLEYVHPGSINKYVHEHCGAITECVVRSFTRHILSGLAYLHSTKTIHRDIKGANLLVDSNGVVKLADFGMAKHFVMQLSGPAANLSLKGSPYWMAPELLQSVMQKDVSSDVALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVMRESPSIPETLSPEGKDFLRSCFCRNPAERPSASMLLEHRFLKNPQQLDVPTCTQALNAMKLTDIALSPRELPSHKLEQLVVSPVAQTNRVKPANNETRQQSDLTAVPRHSPRSTLDALPSLS 744
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AQU5 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0
Identity = 314/536 (58.58%), Postives = 375/536 (69.96%), Query Frame = 0
Match: A0A5J5AQU5 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0
Identity = 314/536 (58.58%), Postives = 375/536 (69.96%), Query Frame = 0
Query: 72 IAPQPLPLPELATLLRQEAAHPSNNSVSVPLPSPPASKSR--EDREKSDAHRRDGDALPLTS--GISSKIASQG---------TLASRRSPGRPYGTEMTRNN-KLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQ-PFEKTGISADNSPIHIQKMNFGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQTNVHPLPLPP----PASTASQSVLSPKFAAKQGKSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQ 587
+ PQPLP+PEL LLR+ A+ S SV+VPLPSP + R +RE++D DG+ +TS G++S A + T +SR++P G R+N +LN P+S P S S+P+ SP + S+ L SH++S F WSAPE+ LG P+Q EKT S D+SP+H N + SP G SPL N+ +T+T+ D ++Q +VHPLPLPP P A S ++ K + K W KGK IGRGTFGSVYV + ETGALCAMKEVEL P D KSAECI+QLEQEI++L QLKHPNIVQYYGSE V GD+F IYLEYVHPGS+ Y+ +HCGAITE +VRNFTRHILSGL YLHS KTIHRDIKGANLLVDAYGVVKLADFGMAKHL+GQ +NLSLKGSPYW+APELLQ +Q ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKVL+ETP IP+TLS EGKDFL CCF RNPAERPSAR LLEH F++NSQQ
Sbjct: 81 VGPQPLPIPELTMLLRRRDANSS--SVNVPLPSPKEAPFRGVMERERTDGLIGDGNGDGVTSNGGLASSSACEDARKNIELAETQSSRKAPQELNGLGRIRDNYRLNFPISAPTSPLSTPTRSPQKSTSDILTSHYMSQ-VFQVWSAPEIPHSGRTLGLGFPHQMSSEKTAFSFDHSPLHSPCRN----TRSPSGPASPLHNKLSIETATSWHDCNSQASVHPLPLPPGAAMPLQQAPVSQVTAKLDSIPMKCQWQKGKPIGRGTFGSVYVATHIETGALCAMKEVELYPDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIV---------------GDKFCIYLEYVHPGSINKYVSEHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDAYGVVKLADFGMAKHLTGQVSNLSLKGSPYWLAPELLQSVVQKDTSSDLALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVLRETPPIPQTLSLEGKDFLSCCFCRNPAERPSARKLLEHPFLRNSQQ 594
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BVT8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0
Identity = 317/542 (58.49%), Postives = 378/542 (69.74%), Query Frame = 0
Match: A0A5J5BVT8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0
Identity = 317/542 (58.49%), Postives = 378/542 (69.74%), Query Frame = 0
Query: 72 IAPQPLPLPELATLLRQEAAHPSNNSV-SVPLPSPPASKSR--EDREKSDAHRRDG--DALPLTSGISSKIASQG---------TLASRRSPGRPYG-TEMTRNNKLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPAFHNWSAPELHSPDMILGHAHPYQPF-EKTGISADNSPIHIQKMN-FGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQTNVHPLPLPPPASTAS----QSVLSPKFAAKQGKSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQQDKAP 591
+ PQPLPLPE A L +AA SN+S+ +VPLPSP R E+RE+ D DG D + + G+ S+ A Q T S + P G + N +LN P+S P +SP+LS + + SH++SP WSAPE+ DM LG PYQ EKT S D+SP+H + + +++ SP G SPL N+ + T+ R+ + Q + HPLPLPP A+T+S S ++ K A K W KGKLIGRGTFGSVYV ++R+TGALCAMKEVE++P D KSAECI+QLEQEI++L QLKHPNIVQYYGSE V GD+FYIYLEYVHPGS+ Y+ +HCGA+TE +VRNFTRHILSGL YLHSTKTIHRDIKGANLLVDA+GVVKLADFGMAKHL+GQ ANLSLKGSPYWMAPELLQ Q ++ DLALAVDIWSLGCTIIEM+NGKPPWSEYEG AAMFKVL+ETP IP+TLS EGKDFL CCF RNPAERPSA MLLEHRF+KNSQQ P
Sbjct: 80 VGPQPLPLPEYAIFLGGDAA--SNSSLGNVPLPSPKEGPVRGGEERERPDGLVGDGNGDGVASSGGLGSRPAYQDARKQKEHAETRPSTKVPPELNGLARVQYNYRLNAPISAP----TSPALSQRGSTRDVFTSHYMSP-NVQVWSAPEMRPLDMTLGLGFPYQILSEKTAFSVDSSPLHSPRASPCRNTTRSPSGPASPLHNKLSLEAPTSWRECNAQASDHPLPLPPSAATSSPLAPVSQVTVKPEAIPMKCQWKKGKLIGRGTFGSVYVATNRQTGALCAMKEVEILPDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIV---------------GDKFYIYLEYVHPGSINKYVHEHCGAMTESVVRNFTRHILSGLVYLHSTKTIHRDIKGANLLVDAHGVVKLADFGMAKHLNGQVANLSLKGSPYWMAPELLQSVSQKDASSDLALAVDIWSLGCTIIEMLNGKPPWSEYEGAAAMFKVLRETPPIPKTLSSEGKDFLHCCFHRNPAERPSASMLLEHRFLKNSQQLDVP 599
BLAST of XM_017362758.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6TJK5 ((mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|RefSeq:XP_027077691.1}))
HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 314/535 (58.69%), Postives = 371/535 (69.35%), Query Frame = 0
Match: A0A6P6TJK5 ((mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|RefSeq:XP_027077691.1}))
HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 314/535 (58.69%), Postives = 371/535 (69.35%), Query Frame = 0
Query: 81 ELATLLRQEAAHPSNNSVS--VPLPSPPASKSRE------DREKSDAHR--RDGDALPLTSGISSKIASQGT---------LASRRSPGRPYGTEMTRNN-KLNVPLSIPASSFSSPSLSPANNFSETLASHHLSPPA-FHNWSAPELHSPDMILGHAHPYQPF-EKTGISADNSPIHIQKMNFGHSSISPQGVVSPL-NRKPADTSTTRRDSSNQ--TNVHPLPLPPPASTASQSVLSPKFAAKQG----KSHWNKGKLIGRGTFGSVYVGSDRETGALCAMKEVELVPGDEKSAECIRQLEQEIQLLRQLKHPNIVQYYGSETVSIIYAKRNSNVYMQVGDRFYIYLEYVHPGSLVNYIRDHCGAITEPIVRNFTRHILSGLTYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGQAANLSLKGSPYWMAPELLQPDMQNESDPDLALAVDIWSLGCTIIEMMNGKPPWSEYEGPAAMFKVLKETPAIPETLSPEGKDFLQCCFRRNPAERPSARMLLEHRFMKNSQ 586
EL LLR+++ S+ + S VPLPSP + RE ++EKSD + DA +S + ++ SQ +SR+SP + G+E +N +++ PLS PAS ++SP+LSP N + L +++PP+ F WSAPE+ S D L YQ E DNS + K+N S SP G SPL N+ ++TS TR D + Q +VHPLPLPP ++ ASQ L P+ K KS W KGKLIGRGTFGSVYV S+++TGALCAMKEVE++P D KSAECIRQLEQEI++L LKHPNIVQYYGSE V GDRFYIYLEYVHPGS+ +I DHCGAITE +VRNFTRHIL GL YLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSG AANLSLKGSPYWMAPELLQ MQ +S+ DLALA+DIWSLGCTIIEM+NGKPPWSEYEG AAMF+VLKETP IPE LS EGKDFL+CCFRRNPAER SA LLEHRF+ S
Sbjct: 117 ELQMLLRRDSKSASDRTTSKNVPLPSPGEAHQRECGAEEKEKEKSDCLNGVMNNDA-ATSSNAAGRLISQDAQKNVENTDNWSSRKSPPKVNGSERNPDNYRMSTPLSAPASPYASPALSPHRNAGDVLTPQYMTPPSLFQVWSAPEMPSLDSTLVSGFSYQSSSEIAAFPVDNSSLPSPKINL---SKSPNGPASPLCNKLSSETSVTRHDCNAQASVSVHPLPLPPGSAMASQPTLIPQLTPKLDIAPIKSQWQKGKLIGRGTFGSVYVASNKKTGALCAMKEVEMLPDDPKSAECIRQLEQEIKVLSHLKHPNIVQYYGSEVV---------------GDRFYIYLEYVHPGSINKFIHDHCGAITESVVRNFTRHILCGLAYLHSTKTIHRDIKGANLLVDAYGVVKLADFGMAKHLSGHAANLSLKGSPYWMAPELLQSVMQQDSNSDLALAIDIWSLGCTIIEMLNGKPPWSEYEGAAAMFRVLKETPPIPENLSAEGKDFLRCCFRRNPAERASASTLLEHRFVTTSH 632
| Match Name | Stats | Description |
|---|---|---|
| A0A2R6R5Q2 | E-Value: 0.000e+0, PID: 59.52 | (Mitogen-activated protein kinase kinase kinase {E... [more] |
| A0A7J0F7K0 | E-Value: 0.000e+0, PID: 54.10 | (Mitogen-activated protein kinase kinase kinase 5 ... [more] |
| A0A2R6R6D2 | E-Value: 0.000e+0, PID: 54.00 | (Mitogen-activated protein kinase kinase kinase {E... [more] |
| A0A5B7B8G2 | E-Value: 0.000e+0, PID: 59.04 | (Putative mitogen-activated protein kinase kinase ... [more] |
| A0A5B7B4K5 | E-Value: 0.000e+0, PID: 59.04 | (Putative mitogen-activated protein kinase kinase ... [more] |
| A0A4S4EUR6 | E-Value: 0.000e+0, PID: 54.79 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A7J7I885 | E-Value: 0.000e+0, PID: 54.25 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5J5AQU5 | E-Value: 0.000e+0, PID: 58.58 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5J5BVT8 | E-Value: 0.000e+0, PID: 58.49 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A6P6TJK5 | E-Value: 0.000e+0, PID: 58.69 | (mitogen-activated protein kinase kinase kinase 5 ... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |