Resource Type:
Polypeptide
Name:
XM_017363231.1
Identifier:
XM_017363231.1-protein
Sequence:
MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMV
DWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVE
ICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPH
IPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHT
RPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLS
RGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIR
GGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYL
DASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAV
ATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNPCA
SS
Sequence Length:
452
Sequence Checksum:
bc72f388e595f619841b25f50d9b5399
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017363231.1, derives from mRNA, XM_017363231.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
back to top
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1LIY3 ((Formamidase {ECO:0000313|EMBL:PWA48956.1}))
HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0
Identity = 406/451 (90.02%), Postives = 431/451 (95.57%), Query Frame = 0
Match: A0A2U1LIY3 ((Formamidase {ECO:0000313|EMBL:PWA48956.1}))
HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0
Identity = 406/451 (90.02%), Postives = 431/451 (95.57%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNPCAS 451
MAPPTPKLIV IDL+KKP EQ LPLHNRWHP+IP VA V+TG++FR+EMVDWTGGAIKDDNSA+D+KY+DLSTVHYLSGPIRVVD EG AKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPG+THPGIIGTAPS ELL+IWNKRERELEE G S+KLCEVLH+RPLANLPSTKGC LG+I T EWE+ ANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLEL+CEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDE+GRQHYLDAS+AYKRAVLNAIDYLS+FGY+KEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKA+KLP+GPRLVRNP+IP+CTYDGNLP T+NP AS
Sbjct: 1 MAPPTPKLIVPIDLRKKPWEQKLPLHNRWHPDIPSVATVRTGQLFRIEMVDWTGGAIKDDNSASDIKYLDLSTVHYLSGPIRVVDDEGIAAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGITHPGIIGTAPSMELLNIWNKRERELEENGLNSLKLCEVLHSRPLANLPSTKGCLLGQIPEGTNEWEKTANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDETGRQHYLDASVAYKRAVLNAIDYLSKFGYSKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKANKLPIGPRLVRNPDIPRCTYDGNLPITQNPGAS 451
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7MB37 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4084391.1}))
HSP 1 Score: 842.803 bits (2176), Expect = 0.000e+0
Identity = 401/451 (88.91%), Postives = 430/451 (95.34%), Query Frame = 0
Match: A0A6S7MB37 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4084391.1}))
HSP 1 Score: 842.803 bits (2176), Expect = 0.000e+0
Identity = 401/451 (88.91%), Postives = 430/451 (95.34%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNPCAS 451
MAP TPKL+V IDLKKKP EQ LPLHNRWHPEIPPVA V TGE+FRVEMVDWT GA+KDDNSA+DVK++DLSTVHYLSGPI+VVD+EG AKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPG+THPGIIGTAPS ELL+IWN+RE+ELEE G +S++LCEVLH+RPLANLPSTKGC LGKI T EWE+IANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLEL+CEIIRGGMKEYLTPMGPTPLHVNPIFEIGP+EPRFSEWLVFEGISVDESGRQHYLDAS+AYKRAVLNAIDYLS+FGY+KEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPK K+PVGPR+VRNP+IP+C+YDG+LP TKNP A+
Sbjct: 1 MAPRTPKLVVPIDLKKKPWEQKLPLHNRWHPEIPPVATVNTGEVFRVEMVDWTAGAVKDDNSASDVKHLDLSTVHYLSGPIKVVDEEGEAAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGITHPGIIGTAPSMELLNIWNEREKELEENGLKSLRLCEVLHSRPLANLPSTKGCLLGKIPEGTQEWEKIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPMEPRFSEWLVFEGISVDESGRQHYLDASVAYKRAVLNAIDYLSKFGYSKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKTKKVPVGPRVVRNPDIPRCSYDGDLPITKNPGAT 451
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1CC20 ((Formamidase {ECO:0000313|EnsemblPlants:PGSC0003DMT400064264}))
HSP 1 Score: 842.803 bits (2176), Expect = 0.000e+0
Identity = 400/448 (89.29%), Postives = 426/448 (95.09%), Query Frame = 0
Match: M1CC20 ((Formamidase {ECO:0000313|EnsemblPlants:PGSC0003DMT400064264}))
HSP 1 Score: 842.803 bits (2176), Expect = 0.000e+0
Identity = 400/448 (89.29%), Postives = 426/448 (95.09%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNP 448
MAPPTP+L++ IDLKKKP EQ LPLHNRWHPEIPPV E+KTGEMFR+EMVDWT GAI+D+NSA DVK VDLSTVHYLSGPIRVVD +G PA+PGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFP ATKAIWYFEGIYAYSPHIPGVRFPGL HPGIIGTAPS ELL+IWN+RER+LEETG QS+KLCEVLH+RPLANLPSTKGC LGKIQ TAEW RIA+EAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGAN STGDMHFSQGDGEVSFCGAIEMSGFLEL+CEI+R GMKEYLTPMGPTPLHVNPIFEIGP+EPRFSEWLVFEGISVDESG+QHYLDAS+AYKRAVLNAIDYLS+FGY+KEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPK +K+P+GPRL+RNP IPQCTYDGNLP TKNP
Sbjct: 1 MAPPTPRLVIPIDLKKKPWEQKLPLHNRWHPEIPPVTEIKTGEMFRIEMVDWTAGAIQDNNSAIDVKTVDLSTVHYLSGPIRVVDTDGNPAEPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPRATKAIWYFEGIYAYSPHIPGVRFPGLVHPGIIGTAPSKELLNIWNERERKLEETGPQSLKLCEVLHSRPLANLPSTKGCILGKIQDGTAEWNRIADEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEILRNGMKEYLTPMGPTPLHVNPIFEIGPMEPRFSEWLVFEGISVDESGQQHYLDASVAYKRAVLNAIDYLSKFGYSKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKVNKVPLGPRLMRNPGIPQCTYDGNLPITKNP 448
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EK89 ((Acetamidase/Formamidase family protein {ECO:0000313|EMBL:GFY86626.1}))
HSP 1 Score: 841.647 bits (2173), Expect = 0.000e+0
Identity = 394/449 (87.75%), Postives = 429/449 (95.55%), Query Frame = 0
Match: A0A7J0EK89 ((Acetamidase/Formamidase family protein {ECO:0000313|EMBL:GFY86626.1}))
HSP 1 Score: 841.647 bits (2173), Expect = 0.000e+0
Identity = 394/449 (87.75%), Postives = 429/449 (95.55%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNPC 449
MAPPTP+ +V +DLKKKP EQ LPLHNRWHP++PPVAEVKTGE+FRVEMVDWTGG I+DD+SA DVK++DLSTVHY+SGPIRVVD +G PAKPGDLLAVEICNLGPLPGDEWGFTA FDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPS ELL+IWN+RER+LEETG Q++KLCEVLH+RPLANLPS KGC LGKIQ T EWE+IANEAARTIPGRENGGNCDIKNLSRGSK+YLPVFVEGANFSTGDMHFSQGDGEV+FCGAIEMSGFLEL+CEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDAS+AYKRAVLNAIDYLS+FGY+KEQ+YLLLSCCPCEGRISGIVD+PNAVATLAIPT+IFDQDIRPK +K+PVGPR+VR P++ +C Y+GNLPTTKNPC
Sbjct: 1 MAPPTPRQVVDVDLKKKPWEQKLPLHNRWHPDLPPVAEVKTGEVFRVEMVDWTGGVIRDDDSANDVKFIDLSTVHYMSGPIRVVDADGAPAKPGDLLAVEICNLGPLPGDEWGFTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSMELLNIWNERERKLEETGLQTLKLCEVLHSRPLANLPSPKGCLLGKIQKGTPEWEKIANEAARTIPGRENGGNCDIKNLSRGSKVYLPVFVEGANFSTGDMHFSQGDGEVAFCGAIEMSGFLELKCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASVAYKRAVLNAIDYLSKFGYSKEQIYLLLSCCPCEGRISGIVDSPNAVATLAIPTSIFDQDIRPKNNKVPVGPRVVRTPDVLKCAYEGNLPTTKNPC 449
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8FP03 ((formamidase-like {ECO:0000313|RefSeq:XP_016560961.1}))
HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0
Identity = 400/448 (89.29%), Postives = 425/448 (94.87%), Query Frame = 0
Match: A0A1U8FP03 ((formamidase-like {ECO:0000313|RefSeq:XP_016560961.1}))
HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0
Identity = 400/448 (89.29%), Postives = 425/448 (94.87%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNP 448
MAPPTP+L++ IDLKKKP EQ LPLHNRWHPEIPPV E+KTGEMFR+EMVDWT GAI+D+NSA DVK VDLSTVHYLSGP+RVVD +G PA+PGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFP ATKAIWYFEGIYAYSPHIPGVRFPGL HPGIIGTAPS ELL+IWN+RER+LEETG Q++KLCEVLH+RPLANLPSTKGC LGKIQ T EW RIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGAN STGDMHFSQGDGEVSFCGAIEMSGFLEL+CEIIR GMKEYLTPMGPTPLHVNPIFEIGP+EPRFSEWLVFEGISVDESG+QHYLDAS+AYKRAVLNAIDYLS+FGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPK +K+P+GPRLVRNP IPQCTYDG+LP TKNP
Sbjct: 1 MAPPTPRLVIPIDLKKKPWEQKLPLHNRWHPEIPPVTEIKTGEMFRIEMVDWTAGAIQDNNSAIDVKTVDLSTVHYLSGPVRVVDLDGNPAEPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPRATKAIWYFEGIYAYSPHIPGVRFPGLVHPGIIGTAPSKELLNIWNERERKLEETGPQTLKLCEVLHSRPLANLPSTKGCILGKIQDGTHEWNRIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEIIRNGMKEYLTPMGPTPLHVNPIFEIGPMEPRFSEWLVFEGISVDESGQQHYLDASVAYKRAVLNAIDYLSKFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKVNKVPIGPRLVRNPVIPQCTYDGSLPITKNP 448
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834GAQ1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7129530.1}))
HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0
Identity = 396/452 (87.61%), Postives = 430/452 (95.13%), Query Frame = 0
HSP 2 Score: 96.6709 bits (239), Expect = 7.741e-19
Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 0
Match: A0A834GAQ1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7129530.1}))
HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0
Identity = 396/452 (87.61%), Postives = 430/452 (95.13%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNPCASS 452
MAPPTP+L+V IDLKK+P Q PLHNRWHP+IPPVAEVKTGE+ RVEM+DWTGG IKDD+SA DVK++DLS VHYLSGPIRV D +G PAKPGDLL VEICNLGPLPGDEWG+TA FDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPS ELL+IWN+RERE+EETG Q++KLCEVLH+RPLANLPS KGC LGKI+ T+EWE+IA+EAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLEL+CEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDAS+AYKRAVLNAIDYLS+FGY+KEQ+YLLLSCCPCEGRISGIVD+PNA ATLAIPTAIFDQDIRPKASK+PVGPRLVRNP++ +CTYDGNLPTTKNPC+++
Sbjct: 88 MAPPTPRLVVPIDLKKQPRGQKFPLHNRWHPDIPPVAEVKTGEVIRVEMLDWTGGIIKDDDSANDVKFIDLSIVHYLSGPIRVTDADGAPAKPGDLLVVEICNLGPLPGDEWGYTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSMELLNIWNEREREVEETGLQNLKLCEVLHSRPLANLPSPKGCLLGKIKEGTSEWEKIAHEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASVAYKRAVLNAIDYLSKFGYSKEQIYLLLSCCPCEGRISGIVDSPNACATLAIPTAIFDQDIRPKASKVPVGPRLVRNPDVLKCTYDGNLPTTKNPCSTT 539
HSP 2 Score: 96.6709 bits (239), Expect = 7.741e-19
Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 0
Query: 7 KLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLS 72
+L++ IDLKKKP EQ LPLHNRWHP+IPPV+EV+TGE+FRVEM+D++GG I + SA D+K+ D S
Sbjct: 7 RLVLPIDLKKKPWEQKLPLHNRWHPDIPPVSEVRTGELFRVEMMDFSGGRITQEYSAEDIKHADPS 72
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314KPP3 ((Uncharacterized protein {ECO:0000313|EMBL:OIT31290.1}))
HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 398/448 (88.84%), Postives = 425/448 (94.87%), Query Frame = 0
HSP 2 Score: 95.5153 bits (236), Expect = 1.862e-18
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
Match: A0A314KPP3 ((Uncharacterized protein {ECO:0000313|EMBL:OIT31290.1}))
HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 398/448 (88.84%), Postives = 425/448 (94.87%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNP 448
MAPPTP+L++ IDLKKKP EQ LPLHNRWH EIPPV E+KTGE+FR+EMVDWT GAI+D+NSA DVK +DLSTVHYLSGPIRVVD +G PA+PGDLLAVEICNLGPLPGDEWGFTAIFDR+NGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGL HPGIIGTAPS ELL+IWN+RER+LEETG QS+KLCEVLH+RPLANLPSTKGC LGKIQ T EW RIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGAN STGDMHFSQGDGEV+FCGAIEMSGFLEL+CEIIR GMKEYLTPMGPTPLHVNPIFEIGP+EPRFSEWLVFEGISVDESG+QHYLDAS+AYKRAVLNAIDYLS+FGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPK +K+P+GPRLVRNP IPQCTYDG+LP TKNP
Sbjct: 79 MAPPTPRLVIPIDLKKKPWEQKLPLHNRWHTEIPPVTEIKTGEIFRIEMVDWTAGAIQDNNSAIDVKTIDLSTVHYLSGPIRVVDTDGKPAEPGDLLAVEICNLGPLPGDEWGFTAIFDRDNGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLVHPGIIGTAPSKELLNIWNERERKLEETGPQSLKLCEVLHSRPLANLPSTKGCILGKIQDGTPEWNRIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVAFCGAIEMSGFLELKCEIIRKGMKEYLTPMGPTPLHVNPIFEIGPMEPRFSEWLVFEGISVDESGQQHYLDASVAYKRAVLNAIDYLSKFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKVNKVPLGPRLVRNPGIPQCTYDGSLPITKNP 526
HSP 2 Score: 95.5153 bits (236), Expect = 1.862e-18
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
Query: 6 PKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLST 73
P L+V +DLKKKP EQ PLHNRWHPEIPPVAEV+ GE+F++EMVD++GG I + +A D+K+ D S
Sbjct: 6 PTLVVQVDLKKKPWEQNPPLHNRWHPEIPPVAEVRVGEVFKIEMVDFSGGGITQEYTAEDIKHADQSV 73
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A2ZRW0 ((Formamidase {ECO:0000313|EMBL:KAE8694266.1}))
HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 398/450 (88.44%), Postives = 426/450 (94.67%), Query Frame = 0
Match: A0A6A2ZRW0 ((Formamidase {ECO:0000313|EMBL:KAE8694266.1}))
HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 398/450 (88.44%), Postives = 426/450 (94.67%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNPCA 450
MAPPTP+L+V IDLKKKP EQ LPLHNRWHPEIPPV VK GE RVEMVDWTGGAIKDD+SATDVK++DLST+HYLSGPIRV DK+G A PGDLLAVEICNLGPLPGDEWG+TA FDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPS ELL+IWN RERE+EE GH+S+KLCEVLHTRPLANLPSTKGCHLGKI+ T+EWE++ANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGAN STGDMHFSQGDGEVSFCGAIEMSGFLEL+CEIIRGGMKEYLTPMGPT LHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQH+LDAS+AYKRAVLNAIDYLS+FGY+KEQ+YLLLSCCPCEGRISGIVD+PNAVATLAIPTAIFDQDIRPKA K+PVGPRLVR P++ +C+YDGNLPTTKNP A
Sbjct: 1 MAPPTPRLVVPIDLKKKPWEQPLPLHNRWHPEIPPVTHVKAGEPIRVEMVDWTGGAIKDDDSATDVKFIDLSTIHYLSGPIRVEDKDGIAAMPGDLLAVEICNLGPLPGDEWGYTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSMELLNIWNDREREVEENGHKSLKLCEVLHTRPLANLPSTKGCHLGKIKKGTSEWEKVANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEIIRGGMKEYLTPMGPTLLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHFLDASVAYKRAVLNAIDYLSKFGYSKEQIYLLLSCCPCEGRISGIVDSPNAVATLAIPTAIFDQDIRPKAGKVPVGPRLVRKPDVLRCSYDGNLPTTKNPAA 450
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4AJG0 ((formamidase-like isoform X2 {ECO:0000313|RefSeq:XP_016476786.1}))
HSP 1 Score: 839.721 bits (2168), Expect = 0.000e+0
Identity = 398/448 (88.84%), Postives = 425/448 (94.87%), Query Frame = 0
Match: A0A1S4AJG0 ((formamidase-like isoform X2 {ECO:0000313|RefSeq:XP_016476786.1}))
HSP 1 Score: 839.721 bits (2168), Expect = 0.000e+0
Identity = 398/448 (88.84%), Postives = 425/448 (94.87%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNP 448
MAPPTP+L++ IDLKKKP EQ LPLHNRWHPEIPPV ++KTGEMFR+EMVDWT GAI+D+NSA DVK +DLSTVHYLSGPI+VVD +G PA+PGDLLAVEICNLGPLPGDEWGFTAIFDR+NGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGL HPGIIGTAPS ELL+IWN+RER+LEETG QS+KLCEVLH RPLANLPSTKGC LGKIQ T EW RIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGAN STGDMHFSQGDGEV+FCGAIEMSGFLEL+CEIIR GMKEYLTPMGPTPLHVNPIFEIGP+EPRFSEWLVFEGISVDESG+QHYLDAS+AYKRAVLNAIDYLS+FGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPK +K+P+GPRLVRNP IPQCTYDG+LP TKNP
Sbjct: 1 MAPPTPRLVIPIDLKKKPWEQKLPLHNRWHPEIPPVTKIKTGEMFRIEMVDWTAGAIQDNNSAIDVKTIDLSTVHYLSGPIKVVDTDGKPAEPGDLLAVEICNLGPLPGDEWGFTAIFDRDNGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLVHPGIIGTAPSKELLNIWNERERKLEETGPQSLKLCEVLHLRPLANLPSTKGCILGKIQDGTPEWNRIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVAFCGAIEMSGFLELKCEIIRNGMKEYLTPMGPTPLHVNPIFEIGPMEPRFSEWLVFEGISVDESGQQHYLDASVAYKRAVLNAIDYLSKFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKVNKVPLGPRLVRNPGIPQCTYDGSLPITKNP 448
BLAST of XM_017363231.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7YH12 ((putative formamidase C869.04 isoform X2 {ECO:0000313|RefSeq:XP_009801226.1}))
HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0
Identity = 397/448 (88.62%), Postives = 425/448 (94.87%), Query Frame = 0
Match: A0A1U7YH12 ((putative formamidase C869.04 isoform X2 {ECO:0000313|RefSeq:XP_009801226.1}))
HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0
Identity = 397/448 (88.62%), Postives = 425/448 (94.87%), Query Frame = 0
Query: 1 MAPPTPKLIVSIDLKKKPSEQVLPLHNRWHPEIPPVAEVKTGEMFRVEMVDWTGGAIKDDNSATDVKYVDLSTVHYLSGPIRVVDKEGTPAKPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLTHPGIIGTAPSAELLDIWNKRERELEETGHQSMKLCEVLHTRPLANLPSTKGCHLGKIQGKTAEWERIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANFSTGDMHFSQGDGEVSFCGAIEMSGFLELRCEIIRGGMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHYLDASIAYKRAVLNAIDYLSRFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKASKLPVGPRLVRNPNIPQCTYDGNLPTTKNP 448
MAPPTP+LI+ IDLKKKP +Q LPLHNRWHPEIPPV E+KTGEMFR+EMVDWT GAI+D+NSA DVK +DLSTVHYLSGPI+VVD +G PA+PGDLLAVEICNLGPLPGDEWGFTAIFDR+NGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGL HPGIIGTAPS ELL+IWN+RER+LEETG QS+KLCEVLH+RPLANLPSTKGC LGKIQ T EW RIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGAN STGDMHFSQGDGEV+FCGAIEMSGFLEL+CEIIR GMKEYLTPMGPT LHVNPIFEIGP+EPRFSEWLVFEGISVDESG+QHYLDAS+AYKRAVL+AIDYLS+FGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPK +K+P+GPRLVRNP IPQCTYDG+LP TKNP
Sbjct: 1 MAPPTPRLIIPIDLKKKPWDQKLPLHNRWHPEIPPVTEIKTGEMFRIEMVDWTAGAIQDNNSAIDVKTIDLSTVHYLSGPIKVVDTDGKPAEPGDLLAVEICNLGPLPGDEWGFTAIFDRDNGGGFLTDHFPCATKAIWYFEGIYAYSPHIPGVRFPGLVHPGIIGTAPSKELLNIWNERERKLEETGPQSLKLCEVLHSRPLANLPSTKGCILGKIQDGTPEWNRIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVAFCGAIEMSGFLELKCEIIRNGMKEYLTPMGPTLLHVNPIFEIGPMEPRFSEWLVFEGISVDESGQQHYLDASVAYKRAVLSAIDYLSKFGYTKEQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKVNKVPLGPRLVRNPGIPQCTYDGSLPITKNP 448
| Match Name | Stats | Description |
|---|---|---|
| A0A2U1LIY3 | E-Value: 0.000e+0, PID: 90.02 | (Formamidase {ECO:0000313|EMBL:PWA48956.1})[more] |
| A0A6S7MB37 | E-Value: 0.000e+0, PID: 88.91 | (Uncharacterized protein {ECO:0000313|EMBL:CAB4084... [more] |
| M1CC20 | E-Value: 0.000e+0, PID: 89.29 | (Formamidase {ECO:0000313|EnsemblPlants:PGSC0003DM... [more] |
| A0A7J0EK89 | E-Value: 0.000e+0, PID: 87.75 | (Acetamidase/Formamidase family protein {ECO:00003... [more] |
| A0A1U8FP03 | E-Value: 0.000e+0, PID: 89.29 | (formamidase-like {ECO:0000313|RefSeq:XP_016560961... [more] |
| A0A834GAQ1 | E-Value: 7.741e-19, PID: 87.61 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7129... [more] |
| A0A314KPP3 | E-Value: 1.862e-18, PID: 88.84 | (Uncharacterized protein {ECO:0000313|EMBL:OIT3129... [more] |
| A0A6A2ZRW0 | E-Value: 0.000e+0, PID: 88.44 | (Formamidase {ECO:0000313|EMBL:KAE8694266.1})[more] |
| A0A1S4AJG0 | E-Value: 0.000e+0, PID: 88.84 | (formamidase-like isoform X2 {ECO:0000313|RefSeq:X... [more] |
| A0A1U7YH12 | E-Value: 0.000e+0, PID: 88.62 | (putative formamidase C869.04 isoform X2 {ECO:0000... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |