XM_017363001.1

Resource Type: 
Polypeptide
Name: 
XM_017363001.1
Identifier: 
XM_017363001.1-protein
Sequence: 
METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEI
FEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFD
FALYEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGD
IHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTS
PSKHVEVESLPVQIERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTE
ASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSS
RLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERA
QEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKFDMLKSSKGDI
FSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHSKQGKEHMQ
SQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGI
ATAVELQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQ
EEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQ
DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENT
IKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNK
EKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEK
IEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEK
KEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDI
VQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLE
MEHKTHEREVEVNNEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGIT
DMYNEDGIDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQ
PDQHAFNQAENEDKFTAPRVVKKSVENERKPGNVLPAKKFTSQNPEVEET
NFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTA
TREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARER
LIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPV
TDKFSAYSRNGGFRQCSSSNNLQHQGMGPSRDLKHSHSSVSGGLEGESAQ
RCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKR
WSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLC
VHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER
Sequence Length: 
1388
Sequence Checksum: 
df29bbc0d613b75a511904c71346c18d
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017363001.1, derives from mRNA, XM_017363001.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AS83 (J domain-containing protein {ECO:0000259|PROSITE:PS50076})

HSP 1 Score: 915.22 bits (2364), Expect = 0.000e+0
Identity = 688/1517 (45.35%), Postives = 893/1517 (58.87%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQ----IERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIG-QRGEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEG-------KEDIHSKQGKEHMQSQVPHETEGTVAWREA--TQLYEVVEEKKISEACRSAD---HSTSS-DSGVGETGIATAVELQE-CQMQTKATSADHECQGNVEKFEVFKGGHE----QVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEE-----NEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEK-------------GSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEKKEKWKRSREARESE---KRVELLFKEDEIMDRSSEANVW------IKE-GKGEGFIEHDIVQEQL--------------MRV--------VSDGILNL--NQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEHKTHERE---VEVNNEPQEANVNSNL---DQNGLQYEGINDKNKDEPLCQIGITDMYNEDGIDQTTGI---HIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKS-------VENERKPGNVLPAKKFTSQNPEVEETNFQKKTRLEEREKE-RLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERA-----------------------------------AKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            ME +S  L +KSY +GN  A K  YDDVF   PK  V TLSPR EDY+EIF  FH SR SSIP+LDLP V E    DV FDVRSS FDYSEVF   NG D A+ YE+LF QS A +DSS E WTPAQSESLSDESDPS CSEKNQSLS+G+ ++S D  KQFNISYHKAN + K+N+ + MTHV QL A+PG+ + +++T P   +E E+  +Q    +  + D  G + EGK+LRKT+S P    +G+Q   +    L  N +  S    F++VSD++L+T PS LPPPSRPPP+ A +  +  R NSK KASKSY FE+  + +S P+FDVE+DASSSAAASAAA+KDA+E+AQ +L +AKE+MERKK+GL++  K   K D   + GE +  FD   S   +        +GS +K FA E  KK        S + EG       K+ +  K G E+  SQ  H+T+ TVAWRE   +++ EV + KK+ E     +   H+T S D G  +     A + QE    + KA     E +    K EV +G  E    + + KA + S+ QEEH+ K K+AQM  +    +K+ R   + G+        DKYE ++     +LEE     N V   QK+   NE  +      +A ER+  G             +K + + ++   +  EA  Q   +K +KE  E    E +    +E  +N+++  E  E + K  +L +  + E    RL   L+W+E +K+     E E+ EK               K  +EQ +N +++++A E   +E+R N+  E+++ EK  KEAWE +E  +R +EA ESE   KR+E  FK++EI  RS + + W      +K+ GK +         EQ+               RV         SDG   L  N+  YT +       G      E     E+  +  E +  ERE   VE+ N   E  +NS +   D   L+   I  ++ +E LC         EDGI    GI   HI+      EMASD EN ++ TH R E   + K +Q     F+  E++D+  +  + KK        +E  R      P K  T Q+ E +E N  +    EEREKE R+++ER+LE D LRK+EEE+EREREREKDRM V+ ATREA +RAFA+ R RAERAAVERATAEVR RA+AEARERLEKASAEARER++ DKAS +ARL+AERAAVERATAEARERA EKA AEKA++ +R+R ER + DK    SR+ G R CSSS++LQ QG+G S   ++SHSSV GG+EGESAQRCKARLER+QRTAERA                                   AKALAEKNMRDL+A REQ ER+RLAE LDA+VKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+ AVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:    1 MENLSNSLSRKSY-NGNGFAAKAVYDDVFGGPPKFGVATLSPRVEDYTEIFRSFHTSRASSIPILDLPVVDE---VDVSFDVRSSKFDYSEVFSGFNGLDLAISYEELFNQSNAGDDSSEEAWTPAQSESLSDESDPSACSEKNQSLSNGNSYESLDGLKQFNISYHKANQRSKENMSNGMTHVAQLHAVPGFIYEVNETLP--RLENENTLLQGTSDLNLSMDFNGRIKEGKQLRKTMSHPANGSLGIQTFGSALKPL--NKRCSSLNGTFLTVSDISLQTNPSQLPPPSRPPPVLAVKEADCGRQNSKLKASKSYDFEQMASDNSPPFFDVEVDASSSAAASAAAMKDAMEKAQAKLKSAKELMERKKEGLQS-CKLGLKNDKKVKEGEVSKFFDGSTSFNNERVQGTCDLDGSGMKAFAAEERKKVTKTTRAVSDSIEGERHINVAKKAVEKKHGWEYSSSQAFHKTDRTVAWRELPFSEVVEVDKSKKVIEQSNDENILVHNTKSHDCGQEKKAAMEAFDHQEKNNRKIKAAREAPEWKEKENKSEVAEGAWEWDEYKGRSKATKESLVQEEHENKIKVAQMVCQQAENEKKLRVGQRHGDIERILTEADKYEENE-----KLEEVPRGSNGVNVTQKLKEVNERIKNEKRFEDAHEREDKG-----------RKVKETVEREEHDKRLTEAIEQKENEKRQKEALEQEEKEIQEKVAHEREENEKRLKETYEREEKEKRLNDALKSEVDEKRLKEALEWEENEKKHKLAYEREENEKRLVEALKQEENQKKLKEALEQEENAKKQKEAYEREENEKRINEACEREDKEKS-KEAWEVEENKQRLQEAHESEESEKRLEEAFKQEEIEKRSEKVSEWEETDIGLKDAGKWKVLNGQSKDHEQMGMDGNEKKPKPDQETRVHMERENLKASDGACKLGDNKKQYTQVACKNKNSGKLEMTKEVLSCEEDGVVRTELRGSERELEAVELENVQFEEIINSCIMVEDGTQLEKNQIRTEDDNESLCVHDSVKKLVEDGI----GIGQTHIESKKKALEMASDSEN-HVFTHERGERGTHMKELQV---TFDPEESKDRLMSSHIEKKMGISLPVVLEGTRNAQKTAP-KVGTRQSSERKEKNLNETLTPEEREKEARMKRERELEKDHLRKIEEEREREREREKDRMAVERATREACDRAFAEARGRAERAAVERATAEVRLRAMAEARERLEKASAEARERMLTDKASVEARLRAERAAVERATAEARERAFEKAMAEKAAFGARERAERSIADKLFTASRD-GVRHCSSSSDLQFQGLGSSSGSRYSHSSVYGGVEGESAQRCKARLERHQRTAERAACVFFPFCFALFKKLRIFCLPRNRKYLKLFLALFQAKALAEKNMRDLLAQREQAERNRLAEVLDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1481    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BWM0 (J domain-containing protein {ECO:0000259|PROSITE:PS50076})

HSP 1 Score: 855.129 bits (2208), Expect = 0.000e+0
Identity = 672/1545 (43.50%), Postives = 894/1545 (57.86%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERN----TDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRS-PGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQR-GEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATE-------GKEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVE---EKKISEACRS----ADHSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGNVEKFE--VFKGGHEQVKIK----AAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKI--EKGSKITI--------------------EQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEA-----------------------------------------WEKKEKWKRSREAR---ESEKRVELLFKEDEIMDRSSEANVWIKE-------GKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVE-NESLEM-----EHKTHEREVEVN--------------------NEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGITD---MYNEDGIDQTT--GI-----HIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKPGNVLPAKKFTSQNPEVEETNFQKKTRLEEREK--------------ERLEKERDLENDFLRKLE---EEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSN---NLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            ME IS  +  KSY +GN  A +T YDDVF   P   VPTLSPR EDY+EIF  F A+R SSIP+LDLP V E    DV F+V SS FDYS+VF   NG DFA+ YE+LF QSK  +DSS E W+PAQSESLSDESD S CSEKN SLS+GD +QS+D  KQFN SY KAN +  +++ +  THVTQL A+PG+SF++ + SP   +E ES P+Q+  +     D  G + EGK+ RKT+SQP  S  G+Q   ++   L    ++ S P   F+ +S+++LRT PS LPPPSRPPP FA +  +S R NSK KASKS+ FERT AG S P  DVE+DASSSAAASAAA+KDA+E+AQ +L +AKE+MERKK+GL++R    FK DI  + GE    FD   S   +     Y  E S +K FA E  +K      V S + E        K  +  K GKE+  SQ   +TEGTV WREA Q YEVVE    KK+ E  +      +++   + G  +     A E QE +   K  +A   C+   ++ E  V +G HE  + K    A + S  Q+EH+ K K+ Q   E +  +K+ R   Q G+        DKYE+ +   + Q +ENEV   +K    N+  +    + +A ER           D  E T+K + + ++   +  EA  ++  +K +KE  ++   E +  +  E  +N+E+Q E  E            EQEE      V L+ + C++E+N  S+ E    E+  K+ +                    EQ +  + E++A E   +E+   +  E+ E EKRLKEA                                         WE++E  KR +EAR   ESEKR++   K +EI  RS EA  W K        GK E        +EQ+    +   L L+Q  +  M      DG +    + +  ++ NE+L++     +H     ++EV                      E +   V + L +      GI     +    +IG  D   ++  D + ++   GI     H ++    +EMASD E  N+ TH R E   +F  +Q    +F+Q E++++  + +V+++ VE+ RK G    A    ++N +      +   R+E +EK              ER+++ER+LE D LRK++    E EREREREKDRM V+  T EARERAFA+ RERAERAAVERATAE RQRA+AEARERLEKASAEARER +A+KAS +ARL+ ERAAVERATAEARERA+ K+  EKA++E++++VER + DKFSA  R+ G RQ SSS+   +LQ QG+G S  L++S+SS  GG+EGESAQRCKARLER+QRTAERAAKALAEKNMRDL+A RE  ER+RLAESLDA+VKRWSSGKEGNLRALLSTLQYILGP+ GWQPIPLT+V+T+ AVKKAYRKATLCVHPDKLQQRGASI QKYI EKVFDLLKEAWNKFNSEER
Sbjct:    1 MENISHSISMKSY-NGNSLAARTVYDDVFGGPPTFGVPTLSPRVEDYAEIFGSFRATRASSIPILDLPVVDE---GDVSFNVGSSRFDYSDVFSGFNGLDFAVSYEELFDQSKGGDDSSEEAWSPAQSESLSDESDLSACSEKNLSLSNGDSYQSFDGVKQFNKSYCKANQRSNEDMSNGATHVTQLHAVPGFSFVVDEISPK--LEHESPPLQVTDDLNFSMDFNGRIMEGKQFRKTMSQPASSSFGIQTFGSDLKPLKGYGRTVSGPNGTFLKLSEISLRTEPSQLPPPSRPPPAFAVKDGDSGRQNSKLKASKSFAFERT-AGGSYPLVDVEVDASSSAAASAAAMKDAMEKAQAKLKSAKELMERKKEGLQSRMNMGFKNDIKDKEGEAGKIFDGSNSLNDERVQETYDLEYSGMKAFAGEGRQKVMKTAQVVSDSIEEGKYINVAKNTLEEKYGKEYRSSQSSQKTEGTVTWREAVQFYEVVETDKSKKVFEQAKGEKVLVNNTKFRECGQEKKSAMEAFEQQE-EGNRKVKTARDACEWKEKEIELKVAEGAHEWDEYKGRSEATKESCRQKEHKNKLKVTQKVCEQEQNEKKLRAGQQCGDIEKMVTEADKYEDCENLLEIQQKENEVDVKKKPKEINKRIKNEKRLKDAHER-----------DESERTLKETVEREKYEKRLTEAIERAENEKRQKEALKHEEKEKQEKEAREREKNEERQKEAGE-----------REQEEK-----VKLEKEACEREENEKSQQEACGREQEEKVKLQKEVREREENEKRRKEACEREQEEKVKLEKEAREREENEKTQKEARERKENEKRLKEALEQEENVKKQTEAYEREDNKKRLNEAHEREEKEKEKRVREVWEQEENKKRLQEARESEESEKRLKETIKHEEIEKRSEEATDWEKTENRFKYVGKWEVLKGRSNDREQIEMEKNKRKLKLDQEIHLHM------DGENSKASDWACKLDNNENLQVTQVASKHNKDSGQLEVTKEALSRQEGGMAWTELKDSEGESEAVGVENVLVKERFNSCGIAQDCTEHEKNKIGTEDAESLHVHDSVKKSAEDGIGIGQTHFERKKKASEMASDPEYPNVLTHERGERGTHFMEVQA---SFDQKESKNRLMSSQVLREHVESGRKMGAAQSAVLEGTRNAQKVAHKVKTGRRIERKEKNLNQILTAEEREKEERMKRERELEQDCLRKIQEREREMEREREREKDRMAVERTTNEARERAFAEARERAERAAVERATAEFRQRAMAEARERLEKASAEARERSLAEKASMEARLREERAAVERATAEARERAVGKSVIEKAAFEAQEQVERSIADKFSASLRDDGVRQGSSSSVLQDLQFQGVGFSSGLRYSYSSGDGGVEGESAQRCKARLERHQRTAERAAKALAEKNMRDLLAQRELAERNRLAESLDAEVKRWSSGKEGNLRALLSTLQYILGPDCGWQPIPLTEVLTSVAVKKAYRKATLCVHPDKLQQRGASIQQKYISEKVFDLLKEAWNKFNSEER 1501    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RLH0 ((Auxilin-like protein {ECO:0000313|EMBL:PSS30835.1}))

HSP 1 Score: 855.129 bits (2208), Expect = 0.000e+0
Identity = 630/1494 (42.17%), Postives = 870/1494 (58.23%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQ----IERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIK-FDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIH-SKQGKEHMQ-----SQVPHETEGTVAWREATQLYEVVE---EKKISEACRSADHSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGN---------VEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSG---------------MERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTER-------------EEKASEEAASEERPNDLSEQDETEKRLKEAWEKKE---KWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIV----------------QEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHE--PSVPVENE----SLEMEHKTHEREVEVNNEPQEANV-NSNLDQNGLQYEGINDKNKDEPLCQIGITD----MYNEDGI------DQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKPGN----VLPAKK---------FTSQNPEVEETNFQKKTRLEEREKER-LEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQH---QGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            ME +S  + K++Y +GN    KT YDDVF   PK  VPTLSPR EDY+EIF  FH+S  SSIP+LD+PA+ E    D  FDVR+S FDYS+VFG  N  DFA+ +++L  QSK   DSS+E WTPAQSESLSDESDPS  SE++QSLS+G  +QS D   QF+ISY+KA    K+N+   M  VTQL ++PG +F++++T PS+ ++  + P+     +  N D  G + EGK+ RKT+S P   + G Q   T+   + +   +    K+F+SVSD++LRT+PS LPPP R PP+ A R  NS R  SK  ASKS+         S P+FDVE+DA SSAA S AA++DA+E+A  +L +AKE++E  K+GL++ TK   K D   +  K  K  D     K +       R+ S  +T+A E  +       + S++ EG++ I+  K   + M      SQ  ++TEG VAWR+  Q YEVVE    +KI E  +        +S    +G            + KATSA  +  G+         V +++V KG       KA + S  QE+H++K K+ Q     + + ++ R  +Q G   +  N  D        T+ Q ++NEV   +K+    E  E         ERK +G               ++  A  + +E  +K S D+++E  +  EA  +  K K +KE  E+  NE +  + +E  +NK++             L+E  ++EE+  RL + ++ +E +K QN   E  +IEK     + + +N +R             +++A+E   SEERP +  E++E EKRL EAWE+ E   K + + E  ES+KR    FK  E   ++ EAN   +  KG     H  V                 +Q   V  +G   +      T+++ +    G     +   ++ V+      S E +  T    +++N + +   V N++L++   +  G+   ++     QIG  D     Y +D +      D  TG H+ +    +E AS++  ++  TH       N K ++ +       E +DK  +  V ++ +E+ RK G+    VL  K+          T QN E +E N       EEREKE  +++ER+LE D L+++EE++ER+REREKDRM VD AT EARERAFA+TRERAERA+VERATAEVRQR +AEAR+RLEKAS EARER +++KAS +ARL+AERAAVERATAEARERA +KA AEKA +E+R+ +ER V DK S   + GG RQ SS ++LQ     G+G S    +S+SSV GG+EGESAQRCKARLER+QRTAERAAKALAEKNMRDL+A REQ ER+RLAE+LDA+VKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKKAYRKA LCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:    1 MENLSHSVSKRAY-NGNGFGDKTLYDDVFGGPPKFGVPTLSPRVEDYAEIFGGFHSSPASSIPILDIPALAE---ADFSFDVRNSHFDYSQVFGGFNALDFAVSFDELLNQSKNRYDSSDEAWTPAQSESLSDESDPSAFSERSQSLSNGGSYQSCDAANQFSISYNKACQTSKENMSTGMACVTQLHSVPGLTFVVNETPPSQKIQDRNTPLLATDVLHPNVDLSGELREGKQFRKTMSYPANRNFGTQTLGTDPKPVRYGRTASLTNKSFVSVSDISLRTQPSQLPPPLRLPPVLAAREINSDRQISKLTASKSFSMGGMAGDCSPPFFDVEVDARSSAAVSTAAMRDAMEKAPAKLRSAKELIE-SKEGLQSHTKFGLKYDAKDKKLKASKSIDGSNCLKDERAHGSCQRDCSPEETYAWEERQTVMKTTQLVSNSIEGEKHINVGKPSADKMHGKDRSSQESYKTEGPVAWRQEAQYYEVVETDKSRKIFEQAKDERLLVQKNSQFHGSG-----------QERKATSAFQQQDGDRRKIKAGWEVHEWDVNKGSS-----KATKESSRQEKHEKKVKVNQEACNQEEIGRKPR-MVQNGNIENIRNEGDN------PTEVQRKQNEVEIEKKLKEVAEGIEDGKPHRIGHERKDNGRRLEETGERERYDYRLKVAAKQEELEKRLKESLDLEKEEKQQREACEREVKGKRQKEARESEENEMRLKEAFEQEENKKR-------------LKEALDREENEKRLKMVIERKENEKRQNLACERNEIEKRLVKDLRREENEKRLSGAFQLEVNGRDQKEANEWEESEERPKEAREREENEKRLDEAWEQIENTNKLQEAHEREESQKRSNEAFKPKENAKKTEEANEGQETQKGIEVAGHCEVLKGCSTEHEQKERKPKSDQRTHVQPEGERFIASDEECTLDDYEDLQSGQAACKQDIKNIKVKKNQRALSFEEDRTTRAESIDINGQVEAVEVVNASLEEQP-KSSGVALVDQQHDKNQIGKNDDTKSPYQQDNVTGSVEADNGTGPHVNRHKTASETASNLGKSHALTHELGRRVINVKEVENE-------ETKDKLMSSHVGRELMESGRKIGSDQTTVLVEKRNAQSTAQKDRTRQNIERKEKNILAP---EEREKEDGIKRERELEKDRLKRIEEDRERKREREKDRMAVDRATLEARERAFAETRERAERASVERATAEVRQRVMAEARDRLEKASTEARERSLSEKASMEARLRAERAAVERATAEARERAFQKAMAEKAHFEAREHIERSVADKSSGACKGGGLRQSSSLSDLQDVQCPGVGASSGPIYSYSSVHGGVEGESAQRCKARLERHQRTAERAAKALAEKNMRDLLAQREQAERNRLAEALDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKANLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1442    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PAM3 ((Auxilin-like protein {ECO:0000313|EMBL:PSR88062.1}))

HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 622/1473 (42.23%), Postives = 866/1473 (58.79%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPV----QIERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFK---KDIGQRGEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIH---SKQGKEHMQ---SQVPHETEGTVAWREATQLYEVVEEKKISEACRSAD------HSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSG--MERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTER-------------EEKASEEAASEERPNDLSEQDETEKR-------------LKEAWEKKEKWKRS------REARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMR-VVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEH-KTHERE-VEVNNEPQEAN-VNSNLDQNGLQYEGIN----DKNKDEPLCQIGITDMYNEDGI------DQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK----PGNVLPAKK---------FTSQNPEVEETNFQKKTRLEEREKE-RLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQH---QGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            ME +S  + K++Y SGN    KT YDDVF  RPK  VPTLSPR EDY+EIF  FH+SR SSIP LDLP++ E    D+ FDVRSS FDYS+VFG  N  DF++ +E+L  QSK   DSS+E WTPAQSESLSDESDPS   E+++S+S+G  +QS +   QFNISY K     ++N+   M  VTQL ++PG++F++++T PS+++   + P      ++ N D  G + EG + RKT+S P  S+   Q   T+   + +   +    ++F+SVSD++LRTRPS LPPP RPPP+ A++  +S R  SK  ASKS+         S P+FDVE+DASSSAA S AA++DA+E AQ +L +AKE+MERK +GL++RTK   K   KD   +  K+I  D     K +       R  S ++T+  E  +       + S+  EG++ I+   +   K+H +   S+  ++TEG VAWR+A Q YEVVE  K S+    A          S   G G+   AT+  LQ+     +   AD E    V +++V KG     + KA + S  QE+H++K K+ Q     +   ++ R A Q G   +        E +++ T+ Q +ENEV   +K+    E  E      +  ER+  G  ++ T   +  E  +K +A   +   +  E+     K+ L++E  E    E +  +  E  +N+++  E  E      +L+E  EQEE+  RL +DL+ +E +K QN   E ++IEK     + + +N +R             +++A+E   SEERP    E++E EKR             L+EA E++E  K S      +E  E++K +E+    + + + S+E     ++ K     +   VQ +  R + SD    LN  +Y  ++  +        +    V     +L  E  +T + E +++N + +    VN +L++  + + G+      ++K++     G    +  D +      D  TG H+ +    +E AS+   +++ TH   E  R    ++     F   E +DK  + +VV++ +EN RK       VL  ++          TSQN E +E N       EEREKE R+++ER++E D LR+ EEE+EREREREKDRM VD AT EARER+F + RERAERAAVERATAEVRQR +AEAR+RLEKAS EAR            L+AERAAVERATAEARERA +KA AEKA +E+R+R+ER V DK S   + G  RQ SS ++LQ    QG+G S    +S+SSV GG+EGESAQRCKARLER++RTAERAAKALAEKNMRDL+A REQ ER+RLAE+L A+VKRWS+GKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:    1 MENLSHSVSKRAY-SGNGFGDKTLYDDVFGGRPKFGVPTLSPRVEDYAEIFGCFHSSRASSIPTLDLPSLAE---TDLSFDVRSSHFDYSQVFGGFNALDFSVSFEELLNQSKTRYDSSDEAWTPAQSESLSDESDPSAFLERSRSMSNGGSYQSCEAVNQFNISYDKVCQSSEENMSTGMAFVTQLHSVPGFTFVVNETPPSRNILGRNTPFLATDDLDPNVDLSGELREGNQFRKTMSYPANSNFAAQTLGTDPKPVRYGRSTSLTNESFVSVSDISLRTRPSQLPPPLRPPPVLAEKDADSDRQKSKLTASKSFSLGGMACDYSPPFFDVEVDASSSAAVSTAAMRDAMENAQAKLRSAKELMERK-EGLQSRTKLGLKYDAKDTNVKASKSI--DGSNCYKDERAHGSCQRACSPVETY--EGRQNVMKTTLLVSNPIEGEKHINVGKTSADKKHAKDSSSKESYKTEGPVAWRQAAQYYEVVETDKCSKIFEQAKDERLLVQKKSQFHGPGQERKATST-LQQQDEDHRKIKADWE----VREWDVNKG-----RSKATKESNRQEKHEKKVKVNQEACNQEENGRKPRIA-QNGNIENIPT-----EGNNL-TEVQRKENEVEIEKKLKEVCEGIEDGKPHKDGHEREDHGRRLKETGERERYEKRLKVAAKQAELEKRLKESLDLEEKENLQREACEREVREKRQKEARESEENEKRLKEAFEQDENKKRLKEGLEQEENEKRLKMDLERKENEKRQNLACERDEIEKRLVKDLRREENEKRLRGTFRLEVNGRDQKEANERKESEERPKKSCEREENEKRLDEAWEQNENTNKLQEAHEREESEKSSNEDFKPKEGHETQKGIEVAGHCEVLKECSTEYEQNERKLKS---AQRTHVQTEGERFIASDETCKLN--DYEDLQSGQA--ACKQDVENIKVKKNQRALSFEEDRTMKAESIDINGQVEAVEIVNVSLEEQPISF-GVALVDPQRDKNQIRKNDGTESPHQHDNVTGSVEADNGTGPHVNRHKTASETASNPLKSHVLTH---ELDRRGINVKEVDVMFENEETKDKLMSSQVVRELMENGRKIESDQTTVLEERRNVQSTAQKVSTSQNIERKEKNILTP---EEREKEDRIKREREMEMDRLRRREEEREREREREKDRMAVDRATLEARERSFGEARERAERAAVERATAEVRQRVMAEARDRLEKASMEAR------------LRAERAAVERATAEARERAFQKAMAEKAPFEARERIERSVADKSSGAYKGGALRQSSSLSDLQEVQCQGVGSSSGPIYSYSSVRGGVEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAEALHAEVKRWSNGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1421    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LD75 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7130860.1}))

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 614/1458 (42.11%), Postives = 845/1458 (57.96%), Query Frame = 0
 
Query:    8 LHKKSYRSGN-VAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQI----ERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEK-NIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHS---------KQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRS-----ADHSTSSDSGVGETGIATAVE---LQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQP-----GETNDKANAVDKYENDDIGTQ---------DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSE--AEKIEKGSKITIEQWQNTEREEKASE-EAASEERPNDLSEQDETEKRLKEAWEKKEKWKRSREA---RESEKRVELLFKEDEIMDRSSEANVWIKEGKG---EGFIE----------HDIVQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEHKTHEREVEVNNEPQEANVNSN-LDQNGLQYEGINDKNKDEPLCQIGITDMYN--EDGIDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKP-------------GNVLPAKKFTSQNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQ---CSSSNNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            L KK+Y +GN     +  YDDVF   PK  +PTLSPR EDY+EIF  FHASR SSIP+LDLPA+  D + +  F+  SS FDYS+VF +SN  DFA+ +EQLF QS  + +S +E WTPAQSESLSDESDPS  SE+++SLS+G+ HQS D  K FNI Y+KA+   K++I   M H TQL A+PG++ I +   PS+       P  +      + D  G   EGK+ RKTVS    S  G   C+T+   + H   +     AF++V+D++LRT+PS LPPP RPPP+ A +  +S    +KFKASKS+    T    S P+ DVE+DASSSAA SAAA+KDA+E A+ +L + KE+ ERKK+GL++RTK     D   R EK + + D+      D     + R+ S +KTF+ +  K+      V S +T  KE+ H          K GK+++ SQV + +E +VAWR+A   Y +VE  K    CR+      D+  S ++           E   LQE +       AD E        E+  G  E  + KA++ S  QE+      + + G  C+  +K  +   QP      + ++    + + ++++ G +         +++E++E    QK     E  E+ ++     ER   G++       IE  +K + + ++   +  EA     K+K +KE  E   NE +  ++ E  +NK++  E  E +    +L+   E+EE+  +L +  +  E   E+  + +   ++IEK  K   +Q  + E++++A E E  S+ER     +++E EKRL EAWE+ EK +R +E     ESEKR++   + +EI  R   AN   +  KG    G++E            +  E   R++S      NQG +                    V  + E+L+  + T    VEV N   E   NS+ L ++  Q+E  N   K   +  + + D     E GID +  I I +   T+ +AS+    ++ +    E+  N   ++  +  F   E EDKF + +V  + VEN +K                 +P K  TSQ  + +  +       E+REK+   K R+LE D  RK+EEE+EREREREKDRM VD A  EARE AF + RERAERA +ERAT+EVRQR +AEARERLEKA  EARER +A+KAS +ARL+AERAAVER TAEARERA +KA  EKA++E+R+RV R V DK SA   NGG RQ    S   ++Q QG+G SR+  +S SSV  G EGESAQRCKARLER+QRTAERAAKALAEKNMRDL+A +EQ E++RLAE+LDA+VKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI +KYICEKVFDLLKEAW+KFNSEER
Sbjct:    4 LSKKAYNNGNGFGDHQAVYDDVFRGPPKFGLPTLSPRVEDYAEIFGGFHASRASSIPILDLPAL--DHEANFSFE-ESSHFDYSQVFSASNACDFAVTFEQLFNQS--NKNSCDEAWTPAQSESLSDESDPSAGSERSRSLSNGESHQSSDGIKHFNILYNKASQGSKEDISTGMAHRTQLLAVPGFTCIFNGNPPSQKKGDRDTPFLVTDVLNPSVDFSGRTREGKQFRKTVSHQATSSFGTTACRTDLKPVRHGRSASCMDGAFVTVTDISLRTQPSQLPPPLRPPPVIAAKDGDSETQKAKFKASKSFSLGETAGDSSPPFLDVEVDASSSAAVSAAAMKDAMENAEAKLKSVKELAERKKEGLQSRTKLGLHNDAKYRKEKPSREIDVSNCFNEDRALGTFQRDCSGMKTFSGDERKELMMTTLVDSDST--KEERHKNLAKISADKKHGKDNL-SQVRNGSEASVAWRQAHN-YRLVETDK----CRNNFDPVEDYRVSMENAPFHEPRQEQKEPAALQEQEDDNTQIRADREA------LELDDGKEE--RSKASKESSRQEKQGTNVNMHEEG--CEQEEKGKQSVAQPKIPVEADKSEVCENLAQVKHNEHGVKVERKLKEATEKIEDDET---QKDCCEREENERRLKETLERERYEKGLKEATERAEIEKRLKEALNQEEREKQQGEACESKNKEKRQKEAREREENEKRSNESLEQEENKKRFKEALEREDTAKKLKMALEEEENEKQLKLARERDE--NEERLLDDHRRQEIEKKLKGAYQQGGDGEKQKEAHEREEKSKERLPVAYKREENEKRLTEAWEQDEKERRLQEVCEREESEKRLKEDLEHEEIDKRPEGANQCEETLKGIEVAGYLEEFKGCSNDHEQHVKDENGRRLIS------NQGTF--------------------VNAKLETLKASNVT----VEVVNVLTEEQSNSSGLAEDDPQHEK-NQTRKKYSMESLHLHDSVKSVEAGID-SKPIQIDRDEKTSGIASNNGKPHVLSSQPGESGPN---VEEVEVMFEMEETEDKFMSSQVATELVENGKKMRADQTAVLEEKINAQRIPQKASTSQYIKRKGKSLSNILAPEKREKQDSMK-RELEEDCQRKIEEEREREREREKDRMAVDRAGPEARESAFVEARERAERAILERATSEVRQRVMAEARERLEKAHTEARERSLAEKASVEARLRAERAAVERVTAEARERAFQKAMNEKATFEARERVGRSVADKASASCNNGGIRQNTLFSDLQDMQCQGVGFSRN-SYSSSSVHCGFEGESAQRCKARLERHQRTAERAAKALAEKNMRDLLALKEQTEKNRLAEALDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQKKYICEKVFDLLKEAWHKFNSEER 1396    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7SPB0 (J domain-containing protein {ECO:0000259|PROSITE:PS50076})

HSP 1 Score: 752.666 bits (1942), Expect = 0.000e+0
Identity = 635/1488 (42.67%), Postives = 868/1488 (58.33%), Query Frame = 0
 
Query:   15 SGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERNTDC----GGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERT----NAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQR-GEKNIKFDMLKSSK--GDIFSPK-YAREGS--EIKT---FAEENEKKARNMIHVASSATEGKEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGIA---TAVELQECQMQT-KATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGS--GMERTASFDSIENTIKFSAD-------VKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAW----------------EKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMRVVSDGILNLN-------QGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEHKTHEREVEVNNEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGITDMYNEDGI--------------DQTTG----------------------IHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----------PGNVLPAKKFTS--QNPEVEETNFQKKTRLEEREKERLEKERDLE-NDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQHQGMGPSRDLKHSHSSVSG---------GLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            +GN  + ++ YDDVF   PK  VPT+SPR EDY+EIF  FHASR SSIPVLDLPAV E    DV+FDV+    DYS++FG   G DFA+ Y++L  QSK  +DSS E WTPA++ SLS+ESD SG   KN+S+S GD HQS+DD K FNIS+HKAN + K ++ +   HVTQLDA+PGY+ ++ D +P +    E+ P+ +  +       GG   E K L KT+S P  S+ G+   + E  V  + +      + FI+VS+++LRT+PS +PPP RPPP+   +  +SSR  S+ KA+K+Y FE T    + G S P+FDVE+DASSSAAASAAA+K+A+E+AQ +L NAKE+MER+K+GL++RTK   + D   + G+ +   + LK  K  G   +PK + RE S  E+KT    ++  E +A   ++VA  + EG+       GKE   SQ  ++TEGT  W+EAT+ YE+V   K  +   + +     +  V E+       A+E  E Q ++ K T+A  E  G  E                A+ +   EEH EK ++A +    +  +K  R  ++  E   K N  D++E  DI  + Q ++NEV   + +   NE      ++ EA ER G+   +++    +  E  +K + +       +K E  K  EA +    +K +KE  E   NE +     +  +N++KQ E  E +    +L++  EQEE+  RL   LK ++  K+Q    E E+ +K  K  +E       EE   ++ A E+R  +  E++E EK+LK+A                 E K +  ++ E +ESEKR+E + + +E   R  EA   ++E +       D+ + + ++   D I+N N       QG Y  MEE            E     EN++++      + EV      QEA       +   + +GI+   K   +  I + +++   G+              D +TG                       H++K     +MAS+ E+  +  +   E     K ++    +F   +++DKF   +V+K+ VEN +K            GN+    +  S  Q+ E +E N  +   LEERE+E   K       D LRKLEEE+EREREREKDRM VD ATREAR+RA+ + RERAERAAVE+ATAE RQRAL EARERLEKA AEARE+ ++DK S +ARL+AERAAVERATAEARERA EKA AEKA  ++R+R+ER V+DKFSA SRN G RQ SSS++LQ Q  G S   ++ +SSV G         G+EGESAQRCKARLERY+RTA+RAAKALAEKN RDL+A REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLTDVITA AVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   21 NGNGFSDRSAYDDVFGGPPKFGVPTISPRVEDYTEIFGSFHASRASSIPVLDLPAVDE---ADVFFDVQE--VDYSDIFGGFRGLDFAVSYDELLGQSKDGDDSSEEAWTPAETGSLSEESDYSG---KNESMSYGDAHQSFDDGKDFNISFHKANQRSKGDMSNG-AHVTQLDAVPGYTVVV-DGTPLQKTNYENPPLWVTGDISLSRSFGGGKIEEKHLWKTMSYPQNSNDGMHTFEIEPQV-GYGENGSHSSETFITVSEISLRTQPSPVPPPLRPPPIVDVKKGDSSRSASQLKANKNYAFEGTAGGSSPGSSPPFFDVEVDASSSAAASAAAMKEAMEKAQAKLKNAKEIMERRKEGLQSRTKLGSRNDTKHKEGKLSSISNSLKDEKVQGSCETPKDFVREASQKEMKTTQVLSDSREGEA--FLNVAKKSAEGR------HGKESWSSQESYKTEGTGKWKEATEFYELVRGDKFRKEQANNEKVLVKNKKVIESRQKEKRAAIESFEQQEESDKKTNAAQEAHGWEEN--------------EAKEACRHEEH-EKVEVAHVLCGWKENEKTWRVGMEHEEAEHKLNVADEWEEHDILIEIQQKQNEVEVKEAMKQENER-----KLKEAKERTGNERKLKKARENEKSEKRLKEALEQEETEKKLKAENEKRLEALKWQENEKKKKEAREREENERRLKVALDWEENEKKQKEACEREENEKRLKQAIEQEENEKRLKEALKQEQILKKQKEACEREENDKRLKEALEH------EENEKKQKAHEKRLKEACEREEIEKKLKDAREREEIEKRRKDVHRQAEDKRRLNKTHERKESEKRLEEMPEWEETDKRLKEATK-LEESEKRPGDSGDVEELKGLKKAHDQIVNENEKKLKSCQGTYAQMEENNF-----KATDEACKLHENKNIQAAQVAPKYEVNSLEANQEALGQEEKLKIAAESQGIHKDFKAVEMENILVEEIFEASGMADGDAEQEKNKIRMDNSTGSVLLDENVKKSLEAGIGIGIGQAHLEKNLRAAQMASNPED--LKKNFTSEWGEGEKSMKQTSVSFEPEDSKDKFRPSQVLKEWVENGKKVEAAQTATLEGKGNIQKTAQQVSNGQSTEKKEKNINETPTLEEREREERMKRERELEKDRLRKLEEEREREREREKDRMAVDRATREARDRAYVEARERAERAAVEKATAEARQRALTEARERLEKACAEAREKTLSDKTSIEARLRAERAAVERATAEARERAFEKAMAEKAVSDARERMERSVSDKFSASSRNSGLRQSSSSSDLQSQSTGSSSGSRYPYSSVYGASYNTEKSEGVEGESAQRCKARLERYRRTADRAAKALAEKNKRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITAVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1455    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4ENL0 ((auxilin-like protein 1 {ECO:0000313|RefSeq:XP_018820978.1}))

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 598/1520 (39.34%), Postives = 810/1520 (53.29%), Query Frame = 0
 
Query:    5 SPPLH-KKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQL-FQQSKA-DNDSSN-EVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERN----TDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRS-PGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQR-GEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEG-------KEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADH-------STSSDSGVGETGIATAVELQECQMQTKATSA------DHECQGNVEK--------------FEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYEN--DDIGTQDQLEENEVIFI-------QKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKD-KLEKEVFENHGNESKHVK--TYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQ----------------------WQNTEREEKASEEAASEERP-NDLSEQDETEKRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVW------IKEGKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTT--MEEPKIFDGG-----SGHIHEPSVPVEN-------------------ESLEMEHKTHEREVEV--NNEPQEANV--NSNLDQNGLQYE----GINDKNKDEPLCQIGITDMYNEDG--IDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----------PGNVLPAKKFTS--QNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            + P H  K+   G   A K  +DDV+   PK  V TLSPR EDYSEIFE FH+SR SSIPVLDLPAV E E   V+FDVRSS  DY+EVF   +G D A+ YE L F Q K  D DSS+ E WTPA S  LS++SD S   EKN   S+GD  Q +D   +  +SYHKAN     ++    THVT+LDA+PG +F++ +    +  + E+  +Q+  +     D    + +GK  +KT+SQP       Q  + +        +S S   + F++VSD++LRT+PS LPPPSRPPP      E S RL S    SKS   E ++   S P+FDVE+DASSSAAA    +K+A+ +AQ +L +AKE MERK +G +   K   K  I  + G+ +   D   + + D       RE + +K    E  +K R +      + EG       K+    K  KE+  S  P + EG+  W+EA Q  E+V   K   A   + H       + + + G  +       ELQE +   K  SA      ++E +  VE               FEV     E  + KAA+    + +H++K K AQ+  E    +K+ R A +  ET +K+      EN  D +  Q +  ++EV          QK+  AN+  E+   I     ++ +   +  +F+  EN           RG  +E     A+D K  KE  E+ G+E K +K    E  +N++ + E  + + + + L+E  EQEE    L   ++ +E  K    + E E  EK  K  +E+                      +Q TE E++  +  A EE+     SEQ++  ++LK A E  +  +RS+E           F+ +EI   S+EA++W      +K+  G+       VQEQ  R  +   LNL +G      +E+  + DG      S ++  P +  ++                   E  E E K  E++ EV  N +   A+    S++ Q  L  +     + D  K  PL   G      E G  + QT   HI K+    + +  I       H   E   N K  QP     NQ E++D+    +V K  VEN +K            GN+  A    +  Q  E +E    + +  E++E ER+++ER+LE D LRK+EEE+EREREREKDRM VD  T E RERA+ + R++AERAAVERA        +AEARERLEKA AEARE+  ++KA+ +ARL+AERAAVERAT EARERA+E+  AEKA++  R+RVER V+DKF A  RN   +Q SS         G +   + S      G+EGES QRCKARLERYQRT ERAAKALAEKNMRDL+A REQ ER+RLAE+LDADV+RWSSGKEGNLRALLSTLQYILGP SGWQPIPLT+VITAA+VKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   15 AAPTHANKTVNYGGFEA-KALFDDVYGGPPKFGVSTLSPRAEDYSEIFESFHSSRASSIPVLDLPAVDESE---VFFDVRSSSLDYAEVFRDFDGLDCAVSYEDLLFDQYKGGDRDSSDDEAWTPAGSGYLSEDSDHS---EKNHCFSNGDFCQPFDSDAE--MSYHKANQTSSKDMCSGATHVTELDAVPGCTFVLEEIDRLQKTD-ENPILQMTDDDNLSMDFSEGMMKGKHRKKTMSQPFNDSTCRQTFRNDLKPEKAYARSGSLSNEMFVTVSDISLRTQPSQLPPPSRPPPSTDVTKEVSRRLTSN---SKSIASEGSDGDSSPPFFDVEVDASSSAAA----MKEAMMKAQVKLRSAKEFMERK-EGFQGSAKMGSKNHITDKEGKVSKIVDECDNLRNDRVQSTCNREDNSMKFSVREEIQKVRKVAQDVPDSMEGEKLLQAAKKSAEKKHSKEYWSSLGPVKIEGSSDWKEAFQSIELVRTVKSGNALEQSSHIEISVHNAKTHEQGCEKDADLGLFELQE-EENKKVMSAIGKHDLEYEKKSKVENEVWEGEEKGEEEYSFEVL---GENERSKAAK----EAQHKKKVKEAQVVFEKLKNEKKVRIAQKHTETENKSTGAGVSENCNDLLEVQKEKYKSEVEQAMNHKENEQKLKEANKRMEREELIRGLCGKEDNEKRKNKTFEVDENV----------RG--HEELLDGAEDAKNVKEALEHKGSE-KRLKQEANERDENQKNKKEACKTQERESILKEALEQEEKTKLLQNIVEQEEKTKLLQNIVEREVHEKRLKEGLEEKDDEKQREFHKGEKKEKKQQETYQITENEKRLKDACAKEEKNLYGASEQEDKSEKLKGAQEGSDCGRRSKEG----------FELEEIEKESTEASIWKESEKRLKDAGGKELKGLSEVQEQSERDENGKTLNLAEGTCVRKELEDLGVSDGAWNLDDSENLQAPKLASKDNENGGKLEETQESLAHEQKEKTESEQKDKEKDTEVVENADAPAADKFEASDIAQGDLGLKEDQSRMEDATKSPPL--DGNAKKVGEPGFGVRQT---HIYKSVFQVD-SFPINQERKIVHELGERGNNVKQAQP---VLNQEESKDRSLPTQVRKDWVENGKKIEAARPAVLEVKGNIQKAAPHVNARQTRERQEKKLNETSTSEDKEMERVKRERELEMDRLRKMEEEREREREREKDRMAVDRKTLETRERAYTEARDKAERAAVERA--------MAEARERLEKACAEAREKTFSEKATVEARLRAERAAVERATTEARERAVERTMAEKAAFGMRERVERSVSDKFPASVRNNELKQSSS-----FSCYGAAYPTEQSE-----GVEGESPQRCKARLERYQRTTERAAKALAEKNMRDLLAQREQAERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPESGWQPIPLTEVITAASVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1458    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5PUX1 ((Trichohyalin-related family protein {ECO:0000313|EMBL:TKS00207.1}))

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 594/1497 (39.68%), Postives = 815/1497 (54.44%), Query Frame = 0
 
Query:   22 KTPYDDVFAARPKV-KVPTLSPRDEDYSEIFEVFHASRG--SSIPVLDLPAVGEDEDPDVYFDVRS-SGFDYSEVFGSSNG--FDFALYEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQI----ERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRS---PGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHS-------KQGKEHMQSQVPHETEGTVAWREATQLYEVVEE---KKISEACRSADHSTSSDSGVGETG-----IATAV--ELQECQMQTKATSADHECQGNVEKFEVFKGGHEQ--------------------VKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPE------RKGSGMERT--ASFDSIENTIKFSADVKQ---ERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEES---NNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGK------GE----GFIEHDIVQEQLMRVVSDGILNLNQGNYTTMEEPKIFD--GGSGHIHEPSVPV-ENESL-------EMEHKTHEREV-------EVNNEP-------QEANVN------------SNLDQNGLQYEGINDKNKDEPLCQI-GITDMYNEDGIDQTTG-IHIKKTSGTNEMASDIENANIS-THTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----PGNVLPAKKFT---SQNPEVEE---TNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS--DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQHQGMGPSRDLKHSHSSV----SGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            KT YDDVF+A P+    PTLSPR EDY EIF  FHA RG  SSIPVLDLP V  +   DV+FDVRS SGFDY+EVFG  N   FD +  E + + S   + SS+E WTP   E LS+ESD S    KNQ LS+GD H+S D + +FNISYHKA+     ++ + +THVT+L  +PGY+F++  +      + E  P+ +      N D  G +   K+LRKT+S P  ++    G      V  H +  R+   P + F++VSDVNL+T PS LPPPSRPPP F  +  + S+     +   S     +    S PYFDVE+DASSSAAASAAA+K+A+E+AQ +L +AKE+MERK+DG ++RTKS  K D   R  +  K D + SSK      KY     E +   E +  + R  I +  S  EGK   ++       K G+E + SQ     +    W+EATQ +E+V     +K++E+ ++ D+    +  + E G      AT    + QE   + +  +ADHE +   +  +V K  H+                     +K++ AQ  +++ E +E+ ++       Q +  E R          +AN   K+EN      +   E   I +++  G  E      E + + E      RK  G ER   ++F+  EN     A ++Q   ER +  EA +Q  K++   E       E K  + YE  + +++     E +    +L+E F +EE+     RLG     +E ++ Q  V E E+ EK  K  +E+ QN  R  +  +   +E+RP +  E  E +K+ KEA E++   K+S+E  E+E  +E   +++    R  E N  ++ GK      GE    G  E + + +    + + G + +   + +  +E  +    GG+  + + +    EN +L       + E K  ++EV       E++  P       +EA V             S +DQ  L++E      +D+    + G   M         TG + I+KT    ++ SD  N        R E R+N     P     NQ + +D F +    KKS+   RK     P + L AK  T   +Q   V E    N  K    EE+E ERL +E++LE + LRK+EEE+EREREREKDRM VD A  EARER   +  +RAERAAVERA        + EARERLEKA  EARE+ +AD  +  +ARL+ ERAAVERATAE RERA  K  +E+ ++E+R+RVER V+DKFSA SRNGG              MGPS      + S     S G+EGES QRCKARLER++RTAERAAKALAEKN RDL+A REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKK YRKATLCVHPDKLQQRGAS+ QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   23 KTVYDDVFSAPPRFGAAPTLSPRVEDYGEIFGAFHAPRGASSSIPVLDLPLVDNEAAEDVFFDVRSCSGFDYNEVFGGFNASDFDVSFEELMMEHSNGRDFSSDEAWTPEDPEYLSEESDNSA---KNQCLSNGDSHESIDGSMEFNISYHKASQSSNKDMTNGITHVTKLFDVPGYAFMVDKSMSLPKTDNEYPPLHVSDDGHLNIDFMGEMMGEKKLRKTMSHP--ANGSADGLVFGNEVRPHKEYVRNVSLPNETFVTVSDVNLKTYPSQLPPPSRPPPAFDFKKRDFSKSTPNCQGVAS---SGSAGDSSPPYFDVEVDASSSAAASAAAIKEAMEKAQAKLKSAKELMERKRDGFQSRTKSGSKNDRKDREGRVSKNDDVSSSK------KYEEGTCERENKIEFSVMEERKKIRIPDS-VEGKRHRNAAEKSSDEKHGRESLSSQGSDRIDEAGEWKEATQFFELVRTNVPRKVTESEKN-DNILLQNINIHEQGQKVKKAATEAMQQQQENGKEVQTFTADHELEEYAKNPKVSKPAHDHGGSNGRSEAAKVSHGEKGLAMKVQVAQ-EVFRVEDEERFRM-----NLQSIGTEKR--------QTRANGSQKHEN----VVEVPREQSKIEVRQTAGDKEKGPWPKEAIRSVENEKQLIRKKDGGERRGRSTFEQEENEKMLKAPLEQMENER-RLKEALKQGEKERRINEACVREETEKKQREAYEKEEKEKRLRAALEWEENERKLKEAFVKEENARYERRLGEATDREENERRQREVREREENEKRLKEALEKEQNEGRLREFCQSEENEKRPKEALEH-ENKKKQKEANEREGSEKQSKEVFENEG-IEETLEQEANEKRLEETNELVESGKLREALEGEASELGTCEPEEIGDASQEICNLGNIEVTLKDVSENDELGVLHEMGGNCRVAKQACETDENRNLGSTRLVGKHEGKNRKQEVTGENAHEEISKVPPGLKIGNKEATVETVNVQVDRQTKVSGVDQGNLEHEKNQSIVEDDAAASVYGDERMRKAGEAGNGTGQMSIEKTKKAFQIESDTANQGKEFAQDRGERRKNM----PQAVVMNQEDRKDNFMSTGAEKKSIVTGRKIEAAQPAD-LEAKGSTLGSTQQFNVSERKMKNLNKTLSPEEKEAERLRREKELEMECLRKMEEEREREREREKDRMAVDRAVLEARERVHTEACDRAERAAVERA--------ITEARERLEKACVEAREKSLADNKTYLEARLR-ERAAVERATAEVRERAFGKVMSERTAFETRERVERSVSDKFSASSRNGG--------------MGPSSSSSVYNGSYYMERSEGVEGESPQRCKARLERHRRTAERAAKALAEKNTRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKVYRKATLCVHPDKLQQRGASLQQKYICEKVFDLLKEAWNKFNSEER 1454    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061DH07 ((Chaperone DnaJ-domain superfamily protein, putative isoform 1 {ECO:0000313|EMBL:EOX91036.1}))

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 603/1508 (39.99%), Postives = 834/1508 (55.31%), Query Frame = 0
 
Query:   20 AGKTPYDDVFAARPKVKV--PTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQS------KADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERNTDC--GGAVTEGKRLRKTVSQPPISDIGLQGCKTEASV-LAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGD-SQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIK-FDMLKSSKGDIFSPKYAREGSEI-KTFAEENEKKARNMIHVASSATEG-------KEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGNVE-------KFEVFKGGHEQVKI----KAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQ----DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEV--------------------------FEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETE-------------KRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTT-----MEEPKIFDGGSGHIH--EPSVPVENESLEMEHKTHEREVEVNNEPQ----EANVNSNLDQNGLQYEGIND-KNKDEPLCQIGITDMYN---------------------------EDGIDQT--TGIHI-----KKTSGTNEMASDIENANIS-THTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKP----GNVLPAKKFT---------SQNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQ---HQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1388
            +GKT YDDVF   P+     PTLSPR EDY+EIF  FHASRG+SIPVLDLP V  D+  +V FDVR+  F+Y+EVFG  +G DFA  YE+L +Q+        D DSS E W  A++ESLS+ SD SG   K Q  S+GD ++  D + +FNISYHKAN +   ++ + +THV QL A P Y+++I   +P +  +  + P+ +  + D      VT+ K LRKT+S P     G     T  S+   +     S  + F+++S++NLRT PS +PPPSRPPPL     +N    N +  AS   +      GD S P+FDVEID+SS+AAASAAA+K+A+++AQ +L +AKE++ERK++G++N TK   K +   + E+  K        K +     Y +E   I ++  EE +K  +     A  + EG       K  +  K GKE        + +    W+EATQ +E+V     ++  R     T++D  + ++       +Q  ++Q KA     E  G +E       K E  +  HE  K+    K A+ S  + E    SK A+     +  +K+ + A +     +   ++   +    G +    D+LE+ E     K V A +   KV E+  A E K +G +   +  SIEN  +             E +++    K  +EVFE   NE+K     +  +N+++  E  E + K  +L+E                            EQ E+  RL      +  ++ Q    E E++EK  +   E+ ++  R E+ +E+   E +  ++ +++ETE             K LKEA EK+E  KR +EA E E  +E + KE      + E   + K  K     E ++ Q+ + +V ++ +  +N  +  T      ++ KI +G   H+   +P V  E   L+   K  E ++  NN+      E    S L++NG +     D + K E + +  +   +N                           +DG+ +    GI I     +K +    M SD  N  +   +  RE  RN K  Q   H     EN+DKF + + VK+SVE  RKP     +VL  K  T         SQ+ E  + N       EE+E ERL++ER+LE + LRK+EEE+EREREREKDRM VD A  EARER + +TRERA RAAVERATAE RQRA+AEAR+RLEKA AEARE+     + +ARL+AERAAVERATAEARERA+EKA AE+A++E+R+RVER ++DKFS  SRN G R  +SS++LQ    Q  G    L++ +SS   G+EGESAQRCKARLERY+RTAERAAKAL EKNMRDLIA REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGW PIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   33 SGKTMYDDVFGGPPRFGTGGPTLSPRPEDYTEIFGGFHASRGASIPVLDLPLV--DDSDEVMFDVRNPRFNYAEVFGGFDGLDFAASYEELMRQANGGGDHDRDGDSSEEAWMQAETESLSEGSDHSG---KYQYFSNGDYYEQIDSSMEFNISYHKANLRRNRDMSNGVTHVAQLHADPEYAYVIE--TPLQKTDNLNPPLHVTDDIDLEFTSRVTKKKHLRKTLSHPSNWTAGGGQTFTNDSIQREYRRNGSSSNEMFVTISEINLRTLPSDVPPPSRPPPLVD--VKNGDYENGQTAASGGRM------GDGSPPFFDVEIDSSSAAAASAAAMKEAMDKAQAKLKSAKELLERKREGIKNSTKPGSKSNGKGKKERASKAVHGFSDIKDERLQGIYEKEDGGIERSVREERQKGVKTQ---APISLEGEKIFNVPKRFVVEKHGKESQSILEVDDIDAADEWQEATQFFELVR----TDKSRMGFEQTNNDKVLMQS-------MQSNELQHKAKK---ESIGALELQLDSDNKVEAVREDHELEKVERDMKTAKESCERGEPTGISKAAKEARRHKGHEKKVKEAQEVSVLEENGQSITARKPLRNGKKPTGADELEQRE-----KRVNAQQKEIKV-EVGLAMELKENGQQEKETSKSIENAKRV------------EESQEREGQKRWREVFEQEKNETK----CKQAENEKRLSEALEQEEKEKRLKEAREREEIKKKEKEACELEESEKIWRMALEQIENEKRLKQAHMQEVNERRQRKALEQEEMEKKQREVHEKEESKRRLEQVTEQGKEERQQKEVIQREETENKIKEACEKVAIDKGLKEACEKEETAKRLKEAHEKEN-IEKMLKE------AVEQKDYSKPVKEAQDTEDEVKQKVVEQVETEEVQGVNCVHQHTERVENGKKLKIAEGTHQHVEGEDPVVSDEVNKLDCGKKHQENQLVGNNDQNCDELEQTEESRLEENGKKEAEFRDGEKKSEAMGKGNVDGKFNASEMAPGDLEVKVNQFRKDEVSDLCHQDDGVKKAGEAGIGIGQRNAEKINSVPGMDSDNNNQGLKFAYEWRERARNNKEAQVPSHL---EENKDKFVSAQSVKESVETGRKPEVAKSSVLEGKGSTQRTVQQVKISQSTERRDKNINDSLTPEEKEAERLKRERELEMERLRKMEEEREREREREKDRMAVDRAALEARERGYVETRERAARAAVERATAEARQRAMAEARDRLEKACAEAREK----SSMEARLRAERAAVERATAEARERAVEKAMAERAAFEARERVERSMSDKFSTSSRNSGMRTSTSSSDLQDQHFQSTGSFGGLRYPYSSAYNGVEGESAQRCKARLERYRRTAERAAKALEEKNMRDLIAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1472    
BLAST of XM_017363001.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2M085 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL06p047072:mrna}))

HSP 1 Score: 657.907 bits (1696), Expect = 0.000e+0
Identity = 605/1581 (38.27%), Postives = 824/1581 (52.12%), Query Frame = 0
 
Query:   14 RSGNVAAGKTPY---------DDVFAARPKVKV-PTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNG---FDFAL-YEQL-FQQSKADNDSSNE----VWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVE--VESLPVQIERNTDCGGAV-TEGKRLRKTVSQP--PISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQP-YFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKF-DMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGK------EDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTS-SDSGVGETG--------------------IATAVELQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIF-IQKIVGANESYEKVIE-----------IMEAPERKGSGMERTASF--DSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDL-------------------------SEQDETEKRLKEAWEKKE---------------KWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGK-------GEGFIEHDIVQEQ----------------LMRV------VSDGILNLNQGNYTTMEEPKIF---DGGSGHIHEPSVPV---ENESLEMEHKTHEREVEVNNEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGITDMYNED-GIDQTTGIHIKKTSGTNEMASD-IENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----------PGNVL-PAKKF-TSQNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLL------------------------------------------------KEAWNKFNSEER 1388
            RSG   A K PY         DDV+   P+  V PTLSPR EDYSEIFE FHASR +SIPVLDLPAV E E  +V+FDVRSSGFDYSEVFG   G    DFA+ YE L F  S   +  S+E     WTPA S S S+ESD     EKN   S GD +QS D   +FN+SYHKA     +++    T + +L  +PG+SF+  + +P +  E  +  L V  + N +   +V  +GK L+KT+SQP   I+D    GC  +   +     S   G  F++VSD++LRT PSHLPPPSRPPP    R E SSR  +    + + V    +AGDS P +FDVE+DASSSAAASAAA+K+A+ +A+ +L +AKE M+RKK+G +   K   K     + EK  K  D   S +G+        E + I+    E  +K        S +T GK      +    K GKE + S    + +G   W+E +Q +E+V      +A  +    TS  +S + E G                    + +A    E + + K+  A   C+G     E  KG     + KAA+    Q+ H +K K+AQ   E     K+ R A +P E+  K+  VD  EN       ++++ E  F  ++ +   E+ E+ ++           + E+ ER+ +   R+ +F  + IE  +K + +  +      EA  Q   +K  KEV E    E K  +     +++++  E  E + +  +L++V EQEE   RL   L+ +E +K+Q  + + E+ +K  +  +EQ ++ +R ++A E    E++  +L                          E +E EK   +A EKK+               K   ++E RE + R    F+++E      EA+   + GK        E     +IV EQ                 M +      VSDG   L   +   ++ PK+    D  SG + E    +   EN   + E K  E++ EV    + ANV      N  + E      K  P    G+        G+ QT   HI K+   +++ SD I       H   E   N K  +      NQ E++D   +  V+K  +ENERK            GN+  PA +   SQ  E +E N  +    E++E ER+++ER+LE + +RK+EEE+EREREREKDRM +D AT EARERA+++ RERA+RAAVERA        +AEARERLEKA AEARE+   +KAS +AR++ ERAAVERATAEARERA+ KA A+KAS+E+R+RV+R V+DK+ A  R+   +Q SS     +    P             G+EGESAQRCKARLER+QRT ERAAKALAEKNMRDL+A REQ ER+RLAE+LDADV+RWSSGKEGNLRALLSTLQYILGP+SGWQPIPLTDVIT+AAVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLL                                                KEAWNKFNSEER
Sbjct:   12 RSGGTLAAKKPYNNGGGGGLYDDVYGGPPRFGVAPTLSPRAEDYSEIFESFHASRATSIPVLDLPAVDE-EGSEVFFDVRSSGFDYSEVFGGGGGGGGLDFAVSYEDLLFDLSNGRDFHSSEEDEEAWTPAGSVSPSEESDHF---EKNHCFSDGDCYQSLDGNVEFNMSYHKATLTSNEDLYRGTTQIPELHGVPGFSFVFDEDTPLQKTEDDIPFLQVTDDDNLNMDFSVGMKGKHLKKTISQPLNGIADGQEFGCNLKPEKVYRRSGSLPNG--FVTVSDISLRTEPSHLPPPSRPPPAADVRNEGSSRSTT----NGNSVASEGSAGDSSPPFFDVEVDASSSAAASAAAMKEAMVKAKAKLRSAKEFMDRKKEGFQGSAKMGSKNHNIDKVEKVSKIVDECNSLRGEGLQSSCNIEDNGIEFSVREERQKVIKTAQEVSVSTGGKLQKVAKKSTEKKHGKESLSSLGSDKIDGGSEWKEESQFFELVRTDTSDKALETNHVQTSVHNSKIHERGQKDKMAVMGVSEQQEEDVRKVKSARANNELEYEKKSKVAHQACEG-----EENKG-----RSKAAKEVHRQKGHVKKEKVAQEVSEQVENVKKVRIAQKPLESEKKSTGVDILEN--CNNLVEVQQKEYAFEAEQAMKHKENNEQQLKEHKKRRESEKRLKESCEREDNEKIRSEAFGWEEIEEGLKEAPERSKHAKILKEAHEQKESEKRLKEVIERDEIEKKQKEACIRQEDEKRLKEALEQEERKKRLQKVLEQEEHEKRLKEALEREEDEKKQKELHKEEERKKRLQKVLEQEEHEKRLKEALEREEDEKKQKELHKGEENEKRLDEGLEQEESEKKQEACEIEENEKIFTDACEKKDEKSLYGASEQVVNSYKLNGAQERREHDGRSRKGFEQEESKKEPKEASTCEETGKRLKDAGGKEELKGLNIVHEQSEGDDYRKAQKLAKGICMHMDGEDFGVSDGAQKLEDND--NLQAPKLACTNDKHSGKLEETQEALAQEENGKKKSELKNKEKDSEV---VETANVLVGEKSNQFRTEDA----KKSPHLDDGVKKAGEPGVGVRQT---HIFKSKSLSQLDSDPINKERKFAHELGERGNNTKQTRA---VLNQEESKDAVMSTHVMKDGIENERKMEAARPAMVEIKGNIQKPAVRVNASQTTERKEKNLNESLTSEDKETERMKRERELEMERIRKIEEEREREREREKDRMAIDRATLEARERAYSEARERADRAAVERA--------MAEARERLEKACAEAREKSFVEKASMEARIRVERAAVERATAEARERAVGKAMADKASFETRERVDRSVSDKYLASFRSSEMKQSSSVYGAAYYTERPE------------GVEGESAQRCKARLERHQRTTERAAKALAEKNMRDLLAQREQAERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKTHFTCPASSQFFLYLAHSYEILWIIFCSSCTVPFILCSFVNETLQWYKEAWNKFNSEER 1535    
Match NameStatsDescription
A0A5J5AS83E-Value: 0.000e+0, PID: 45.35J domain-containing protein {ECO:0000259|PROSITE:P... [more]
A0A5J5BWM0E-Value: 0.000e+0, PID: 43.50J domain-containing protein {ECO:0000259|PROSITE:P... [more]
A0A2R6RLH0E-Value: 0.000e+0, PID: 42.17(Auxilin-like protein {ECO:0000313|EMBL:PSS30835.1... [more]
A0A2R6PAM3E-Value: 0.000e+0, PID: 42.23(Auxilin-like protein {ECO:0000313|EMBL:PSR88062.1... [more]
A0A834LD75E-Value: 0.000e+0, PID: 42.11(Uncharacterized protein {ECO:0000313|EMBL:KAF7130... [more]
D7SPB0E-Value: 0.000e+0, PID: 42.67J domain-containing protein {ECO:0000259|PROSITE:P... [more]
A0A2I4ENL0E-Value: 0.000e+0, PID: 39.34(auxilin-like protein 1 {ECO:0000313|RefSeq:XP_018... [more]
A0A4U5PUX1E-Value: 0.000e+0, PID: 39.68(Trichohyalin-related family protein {ECO:0000313|... [more]
A0A061DH07E-Value: 0.000e+0, PID: 39.99(Chaperone DnaJ-domain superfamily protein, putati... [more]
A0A7N2M085E-Value: 0.000e+0, PID: 38.27(Uncharacterized protein {ECO:0000313|EnsemblPlant... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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