XM_017362333.1

Resource Type: 
Polypeptide
Name: 
XM_017362333.1
Identifier: 
XM_017362333.1-protein
Sequence: 
MSNSNHNSGEGIYITTAIAVDKDKNSPHAVRWAVDNQLKKNASVFLVHVQ
THVSHPTDDVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDV
TNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVH
AVSKGGRVQNIKTATRAARPPTSSKPLSQSGYSSDSSSSFSQSSWKSGSE
KTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPPSVSNLNYMVRT
KQMGSPNISFDSSEYSGLSSFQSADFSMDNSDRSLTSGTSKTNSYSSSPL
GEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMI
AQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAA
YEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVF
KGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEY
GCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKP
EPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAG
TFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEK
GDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDR
LREFACSDDEY
Sequence Length: 
711
Sequence Checksum: 
91084ec4b537a867c7d397ff66378c83
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017362333.1, derives from mRNA, XM_017362333.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BVE7 ((Putative U-box domain-containing protein 52 isoform X1 {ECO:0000313|EMBL:MPA72849.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA72849.1}))

HSP 1 Score: 879.011 bits (2270), Expect = 0.000e+0
Identity = 442/703 (62.87%), Postives = 545/703 (77.52%), Query Frame = 0
 
Query:   15 TTAIAVDKDKNSPHAVRWAVDNQLKKNASVFLVHVQTHVSHPTDDVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARP--PTSSKPLSQSGYSSD------SSSSFSQSSWKS-GSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSP--FPPSVSNLNYMVRTKQMGSPNISF-DSSEYSGLSSFQSADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFA 705
            T  IA+DKDKNS  AV+WAV+N LK+N+   L+HV+T  S P D+V K GR PTE E+Q+ FLPYRG+CARKG+R  E+V+ D DV NALVD+++ NSIS++VVG S+RSALTRAFRN DVPT L K APDFCSV+ +SK  +VQN+++A+R   P   TSSK  SQ+G+S D      S+ SFS  SW+S GSE+ SFD+ S           D   + P DR     +P     ++SN N  VRTK   S   S  D+ ++SG  SFQSADFS +N + S TS  S+++  S +PL  E+E EM+RLK ELKQTMEMYNSA  E  TAKQK REID WK+ E   + + K++E  AL + EMEK+KC+AA+EAA+ A ++AELE++KR  AE  A +EAEE KK MDA   + + YR YTIEEIE  T+ FS S KIGEGGYGPV+K +LD TAVAIKVL+P+++QG++QFQ+E+EVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDR+F+++NTPPI WRTRFKIA+EIATAL+FLHQ+KPEPLVHRDLKPANILLDRNYVSKISDVGLAR+VPPSVA+SVTQYHMTAAAGTFCYIDPEYQQTGMLG KSD+YSLGVMLLQ+IT KPP+G++  ++ AIE+G  S++LDP++ DWPV+EA +FA L LQCCELRRKDRPDL+ VI+PEL+RLR+  
Sbjct:   13 TIVIAIDKDKNSKFAVKWAVENLLKRNSQAILLHVRTETSQPEDNVPKGGRPPTETELQRFFLPYRGYCARKGVRAKEVVLHDIDVPNALVDYIINNSISSIVVGASSRSALTRAFRNADVPTSLSKTAPDFCSVYVISKS-KVQNVRSASRPPTPSSATSSKQTSQTGFSPDTPTSEESNRSFSTGSWRSAGSERMSFDRIS-----------DSMQITPRDRFPSGMNPSSLQHAMSNTNLWVRTKGSSSRQDSTNDTGDFSGPPSFQSADFSSENLNNSCTSDGSRSSLSSQNPL--ELEAEMRRLKLELKQTMEMYNSACKEVNTAKQKAREIDLWKTEEACKMQETKQAELAALAMAEMEKQKCKAAIEAAEMAQQVAELESKKRRNAEMKAKHEAEEKKKVMDAFAHNEIWYRKYTIEEIEITTDYFSNSLKIGEGGYGPVYKAFLDQTAVAIKVLRPNMSQGQKQFQREVEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRIFQRNNTPPIPWRTRFKIASEIATALIFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITAKPPIGLSHHITRAIERGTFSEMLDPTLTDWPVEEALSFAKLALQCCELRRKDRPDLSSVIVPELNRLRDLG 701    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BV82 ((Putative U-box domain-containing protein 52 isoform X1 {ECO:0000313|EMBL:MPA72850.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA72850.1}))

HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0
Identity = 433/700 (61.86%), Postives = 530/700 (75.71%), Query Frame = 0
 
Query:   15 TTAIAVDKDKNSPHAVRWAVDNQLKKNASVFLVHVQTHVSHPTDDVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARP--PTSSKPLSQSGYSSD------SSSSFSQSSWKS-GSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPPSVSNLNYMVRTKQMGSPNISFDSSEYSGLSSFQSADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFA 705
            T  IA+DKDKNS  AV+WAV+N LK+N+   L+HV+T  S P D+V K GR PTE E+Q+ FLPYRG+CARKG+R  E+V+ D DV NALVD+++ NSIS++VVG S+RSALTRAFRN DVPT L K APDFCSV+ +SK  +VQN+++A+R   P   TSSK  SQ+G+S D      S+ SFS  SW+S GSE+ SFD+ S           D   + P DR       FP                           SG  SFQSADFS +N + S TS  S+++  S +PL  E+E EM+RLK ELKQTMEMYNSA  E  TAKQK REID WK+ E   + + K++E  AL + EMEK+KC+AA+EAA+ A ++AELE++KR  AE  A +EAEE KK MDA   + + YR YTIEEIE  T+ FS S KIGEGGYGPV+K +LD TAVAIKVL+P+++QG++QFQ+E+EVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDR+F+++NTPPI WRTRFKIA+EIATAL+FLHQ+KPEPLVHRDLKPANILLDRNYVSKISDVGLAR+VPPSVA+SVTQYHMTAAAGTFCYIDPEYQQTGMLG KSD+YSLGVMLLQ+IT KPP+G++  ++ AIE+G  S++LDP++ DWPV+EA +FA L LQCCELRRKDRPDL+ VI+PEL+RLR+  
Sbjct:   13 TIVIAIDKDKNSKFAVKWAVENLLKRNSQAILLHVRTETSQPEDNVPKGGRPPTETELQRFFLPYRGYCARKGVRAKEVVLHDIDVPNALVDYIINNSISSIVVGASSRSALTRAFRNADVPTSLSKTAPDFCSVYVISK-SKVQNVRSASRPPTPSSATSSKQTSQTGFSPDTPTSEESNRSFSTGSWRSAGSERMSFDRIS-----------DSMQITPRDR-------FP---------------------------SGPPSFQSADFSSENLNNSCTSDGSRSSLSSQNPL--ELEAEMRRLKLELKQTMEMYNSACKEVNTAKQKAREIDLWKTEEACKMQETKQAELAALAMAEMEKQKCKAAIEAAEMAQQVAELESKKRRNAEMKAKHEAEEKKKVMDAFAHNEIWYRKYTIEEIEITTDYFSNSLKIGEGGYGPVYKAFLDQTAVAIKVLRPNMSQGQKQFQREVEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRIFQRNNTPPIPWRTRFKIASEIATALIFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITAKPPIGLSHHITRAIERGTFSEMLDPTLTDWPVEEALSFAKLALQCCELRRKDRPDLSSVIVPELNRLRDLG 664    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BC75 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0
Identity = 437/709 (61.64%), Postives = 539/709 (76.02%), Query Frame = 0
 
Query:   10 EGIYITTAIAVDKDKNSPHAVRWAVDNQLKKNASVFLVHVQTHVSHPTDDVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPTSS--KPLSQSGYSSDSSSS------FSQSSWKS-GSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPPSVSNLNYMVRTK----QMGSPNISFDSSEYSGLSSFQSADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFA 705
            EGI  T AIA+DKDKNS  AV+WA++N  KKN  V L+HV+     P D V K GR+PTE E+QQ FLPYRGFCARKG+R  E+V+ D D+ +ALVD+++ NSI ++VVG SNRSALTRAFR+ DVPT L K APDFCSV+ VSKG +V+N+++A+R   P +    K +SQ+G+S D+ +S      FSQ S  S GSE+  FD+   D    T +    + MHP        S    +V+N N  VRTK       SPN    +S++SG  SFQSA  S +NSD S TS  S+++  S +   +E+E EM+RLK ELKQTMEMYNSA   + TAKQK  E+D WKS E   I + K++E  +L + EMEK+KC+AA+EAAQ A +LAE E++K   AE  A +EA E KK +DAL R+ ++ R YTIEEIE AT+ FS S+K+GEGGYGPV+K +L+ TAVAIKVL+P+++QG++QF++E+EVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDR+FR++NTPPI WRTRFKIA+EIATALLFLHQ+KPEPLVHRDLKP NILLDRNYVSKISDVGLAR+VPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLG KSD+YSLGVMLLQ+IT KPP+G+T  +S AIE G  S+ LDP+V DWPV+EA +FA L LQCCELR+KDRPDL+ VI+PEL+RLR+  
Sbjct:    9 EGI-ATIAIAIDKDKNSQCAVKWAIENLWKKNVQVILLHVRNQSLQPQDAVPKGGRSPTETELQQFFLPYRGFCARKGVRAKEVVLHDIDIPSALVDYIINNSIGSIVVGASNRSALTRAFRHADVPTSLSKTAPDFCSVYVVSKG-KVRNVRSASRPPTPSSPRSSKKMSQTGFSLDTPTSEEIDRNFSQRSQTSAGSERIPFDRIG-DSMQTTPRDRLPSSMHP--------SSLQHAVNNTNLCVRTKGSSSSQDSPN---GTSDFSGPPSFQSAGLSFENSDYSFTSDGSRSSFSSQT--AQELEAEMRRLKLELKQTMEMYNSACKVANTAKQKASEMDLWKSEEACKIEEAKQAELASLAMAEMEKQKCKAAIEAAQMAQQLAEQESKKWRNAEMQAMHEAGEKKKVVDALARADIQCRKYTIEEIEIATDYFSNSSKVGEGGYGPVYKAFLEQTAVAIKVLRPNMSQGQKQFRQEVEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRIFRRNNTPPIPWRTRFKIASEIATALLFLHQTKPEPLVHRDLKPDNILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITAKPPIGLTYHISRAIEGGTFSETLDPTVTDWPVEEALSFAKLALQCCELRKKDRPDLSSVIVPELNRLRDLG 701    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6R0A2 ((Serine/threonine-protein kinase {ECO:0000313|EMBL:PSS18080.1}))

HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0
Identity = 433/715 (60.56%), Postives = 529/715 (73.99%), Query Frame = 0
 
Query:    9 GEGIYITTAIAVDKDKNSPHAVRWAVDNQLKKNASVFLVHVQTHVS-HPTDDVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPTSSKPLSQSGYSSDSSSS-------FSQSSWKSGSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDR-------------HSGSKSPFPPSVSNLNYMVRTKQMGS-PNISFDSSEYSGLSSFQSADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRL 701
            G G  +TTAIA+DKDKNS  AVRWA+DN +KK A+V LVHV+T  S    DDV K+G  PTE EMQ+ FLPYRGFCARKG+R  E+V+ D D++NALVDF+  NSIS +V+G S+R+ALTRAFRN DVPT L K APDFCSV+ V+KG +VQ  ++A++ + P +++     + +S D+++S          S     SE+ SFD+SS           DF    P DR              S   SP  P+ SNLN  VRT+ + S  + + +  ++SG  SFQS D S +N D+S  S  S+++  S+     E+E EM+RLK ELKQTM+MYNSA  E++TAK+K +EID WK+ E   +   K ++E A+ L EMEK+K + A+EAA  A RLAELE QKR  AE  A  EA+E +KA+DAL+RS +RYR Y IE+IE AT+ FS S KIGEGGYGPV+K +LDHTAVAIKVL+P+++QGK+QFQ+E+EVLS MRHPNMVLLLGACPEYGCLVYE+MENGSLEDRLFRK+NTPPI WR RFKIAAEIATALLFLHQ+KPEPLVHRDLKPANILLDRNYVSKISDVGLAR+VP SVAD VTQY MTAAAGTFCYIDPEYQQTGMLG KSD+YS G+MLLQ+IT KPP+G+T  V  AIE+G  S++LDP V DWP +EA +FA L +QCCELRRKDRPDL  VILPEL RL
Sbjct:   18 GGGANVTTAIAIDKDKNSESAVRWAIDNLVKKVATVILVHVKTTQSLQSKDDVPKEGHTPTENEMQEFFLPYRGFCARKGVRAKELVLHDIDISNALVDFISNNSISNMVLGASSRNALTRAFRNVDVPTSLCKTAPDFCSVYVVAKG-KVQITRSASQPSTPGSATSSKRSTIFSVDTTTSEDIHRSSSRGSWRSGCSERISFDRSS-----------DFLQSTPHDRVPRSTMASPQQSISSMVSSPQHPA-SNLNLRVRTRGISSIQDSTMEICDFSGPPSFQSTDMSFENLDQSRRSDVSRSSVSSTLA-SRELEAEMRRLKIELKQTMDMYNSACKEAVTAKEKEKEIDRWKTEEACKLQAAKEAQEAAMALAEMEKQKTKVALEAAMMARRLAELEVQKRKNAEMKAMQEAKERRKAIDALSRSEIRYRKYDIEQIEIATDHFSSSLKIGEGGYGPVYKAFLDHTAVAIKVLRPEMSQGKKQFQREVEVLSYMRHPNMVLLLGACPEYGCLVYEHMENGSLEDRLFRKNNTPPIPWRLRFKIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPSSVADCVTQYQMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGIMLLQIITAKPPIGLTHHVGRAIERGTFSEMLDPMVTDWPFEEALSFAKLAVQCCELRRKDRPDLGSVILPELQRL 718    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7FUM6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 790.03 bits (2039), Expect = 0.000e+0
Identity = 395/658 (60.03%), Postives = 504/658 (76.60%), Query Frame = 0
 
Query:   58 DDVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARP--PTSSKPLSQSGYSSDSS------SSFSQSSWKSGSEKT-SFDKSSSDGSSYT--NKSNDFNMMHPLDRHSGSK--SPFPPSVSNLNYMVRTKQMGS-PNISFDSSEYSGLSSFQSADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRL 701
            DD  + G APT  EMQQ+FLPYRGFCARKG+   E+V+ D D++NALVDF+  NSIST+++G S+RS+LTRAFR+ DVPT L KIAP+FCSV+ +SKG +VQ+I++A++ + P    SSK  SQ+ +S+D++       S S  SWKSG   T SFD+++ D    T  +K +  N + P  +HS S+  S     + NL+   R+K   S P+ + D S++SG  SFQS + S +N D SLTS  S+T+   SS    E+E EM+RL+ +LKQ MEMYNS   E++++K+K +EID+WK  E R + + K+++E A+ L EMEK+K + A+EAA  A RLA+ E Q R  AE  A +E  E KKAMDALT S +RYR Y IEEIE AT+ FS S KIGEGGYGPV+K +LDHT VAIKVL+PD++QGK+QFQ+E+EVLS +RHPNMVLLLGACPEYGCLVYE+MENGSLEDRLFRK+N+PP+ W+TRF+I+AE+ATALLFLH++KPEPLVHRDLKPANILL+RNYVSKISDVGLAR+VPPSVA+ VTQY MTAAAGTFCYIDPEYQQTG+LG KSD+YSLGV+LLQ+IT +PP+G++  V  AIE+G  S++LDP VPDWP +EA +FA L  QCCELRR+DRPDL  +ILPEL RL
Sbjct:    8 DDAPRGGNAPTGNEMQQLFLPYRGFCARKGVLAKEMVLHDIDISNALVDFIQNNSISTMILGASSRSSLTRAFRSVDVPTSLCKIAPNFCSVYVISKG-KVQSIRSASQPSIPGGAVSSKRPSQTPFSADTAVSEDLCQSNSYRSWKSGGSSTMSFDRNN-DLMQLTSCDKLSTSNSIVPSPQHSTSRMISSLQHPMCNLDLWFRSKGSSSNPDSTIDVSDFSGPPSFQSTEMSCENLDYSLTSDVSRTSG--SSQTSNELEAEMRRLRDQLKQMMEMYNSVCKEAISSKEKAKEIDKWKPEEERKVLEAKQAQEAAMALAEMEKQKTKVAIEAALMAQRLAKYEIQMRKNAEMKAIHEIGERKKAMDALTCSEIRYRKYPIEEIEVATDYFSNSLKIGEGGYGPVYKAFLDHTPVAIKVLRPDMSQGKKQFQQEVEVLSYIRHPNMVLLLGACPEYGCLVYEHMENGSLEDRLFRKNNSPPLPWKTRFRISAEVATALLFLHRTKPEPLVHRDLKPANILLNRNYVSKISDVGLARLVPPSVANGVTQYQMTAAAGTFCYIDPEYQQTGLLGVKSDVYSLGVILLQVITARPPIGLSYHVGKAIERGTFSEILDPMVPDWPFEEALSFAKLAFQCCELRRRDRPDLGSIILPELQRL 661    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5SJV3 ((U-box domain-containing protein 52-like {ECO:0000313|RefSeq:XP_021817245.1}))

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 406/703 (57.75%), Postives = 514/703 (73.12%), Query Frame = 0
 
Query:   16 TAIAVDKDKNSPHAVRWAVDNQL-KKNASVFLVHVQTHVSHPTDD--VSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPTSSKPLSQSGYSSDSSSSFSQSSWKSGSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPP-SVSNLNYMVRTKQMGSPNISFDSSEYSGLSSFQS-----ADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFACSDD 709
            T +A+++DKNS  AV+WAVDN L  KNA   L+HV++H  H  D   VSKDGR PTEAE+QQ FLPYRGFCARKGI   E+V+ D DV NAL D+VV NSI  +VVG S+ +ALTR FR  DV T L K  P+ C+V+ +SKG ++Q  ++AT    P +++     + +     SSF          +    + SS G    NKS+DF  + P    SGSK+  P  SV++    V + ++   N     S++SG  SFQS      DFSM NS+ S+ S +S T S         ++ EM+RL+ ELKQTM+MY SA  E+  AK+K R++ +WK++E   + + K +EE AL L ++E++K +AA EAA+ A RLA++ET KR  AER A  EAEE ++AMDAL ++ +RYR YTIEEIE AT+ F  S K+GEGGYGPV++ +LDHTAVAIKVL+PDI+QG+ QFQ+E+EVLSC+RHP+MVLL+GACPEYGCL+YEYMENGSLEDRLF K NTPPI W  RFKIAAEIATALLFLHQ+KPEPLVHRDLKPANILLDRNYVSKI+DVGLAR+VPPSVAD+VTQY +TAAAGTFCYIDPEYQQTGMLG KSD+YSLGVMLLQ+IT KP MG++ QV  AIEKG  S++LDP+V DWPV+EA ++A + L+CCELRR+DRPDL+ VILPEL+RLR+    ++
Sbjct:   16 TLVAINRDKNSQCAVKWAVDNLLVDKNAHCTLIHVRSHSFHHHDHGAVSKDGRPPTEAELQQFFLPYRGFCARKGIVAKEVVLHDIDVPNALADYVVSNSICNIVVGASHHNALTRKFRRTDVATSLLKSVPETCAVYVISKG-KIQTSRSATGPQTPKSNAATPRNNSFQRTPLSSFLHGV---PDFEDVISQGSSAGGISLNKSSDFKHVPPKAHRSGSKTNSPTQSVTS----VTSDKLSHGNSISGGSDFSGPLSFQSNGSDNVDFSM-NSEGSINSFSSHTPS--------ALDAEMRRLRLELKQTMDMYTSACKEAFAAKEKTRDLRKWKTSEEHKLEKAKLAEEAALALADVERQKSKAATEAARMAQRLADMETHKRKIAERKAKQEAEERRRAMDALAQNHIRYRRYTIEEIELATDYFKISNKVGEGGYGPVYRAWLDHTAVAIKVLRPDISQGQRQFQQEVEVLSCIRHPHMVLLVGACPEYGCLIYEYMENGSLEDRLFLKSNTPPIPWGVRFKIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKIADVGLARLVPPSVADAVTQYRITAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITAKPAMGLSHQVEEAIEKGAFSEILDPAVTDWPVEEALSYAKMALKCCELRRRDRPDLSTVILPELNRLRDLGMKNE 701    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2LK79 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0
Identity = 408/740 (55.14%), Postives = 521/740 (70.41%), Query Frame = 0
 
Query:    7 NSGEGIYITTAIAVDKDKNSPHAVRWAVDNQLKKNASVFLVHVQTHVSHPTD--DVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPT----------SSKPLSQSGY------------SSDSSSSFSQSSWKS-GSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPPSVSNLNYMVRTKQMGSPNISFDSSEYSGLSSFQSADFSMDNSDR--------------SLTSGTSKTNSYSSSP--LGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFA 705
            +S +G   TT IA+D+DKNS +AV+WAVDN L K++   L+HV+     P D  ++ K+GR PTEAE+QQ+FLPYRGFCARKGI   E+++ D +V++AL+D++  NSIS +VVG SNR+ALTR FRN DVP+ L K AP FC+V+ +SKG     ++TA +A +P T          +S   SQ G                + +S S  S +S GS++ SFD+SS           D  MM P + H  S S   P++S  +++  T    + ++S+  S  +  +S ++ D  + +                 S   G +  N    +P  L + +E EMKRLK EL QTMEMYN+A  E++ A+++ RE+ + KS E R + Q K +EE AL L E+EK+K +AA EAA+ A RLA++E Q+R+ AE  A  E+EE  KAMDAL     +YR YTIEEIE AT+ F  S KIGEGGYGPVFKG LDHT VAIKVL+PD+ QG++QFQ+E+EVLSC+RHPNMVLLLGACPEYGCLVYEYM+NGSLEDR+FRK NTPPI W+ RFKIAAEI+TALLFLHQ+KPEPLVHRDLKPANILL +NY+SKISDVGLAR+VPPSVADSVTQYHMTAAAGTFCYIDPEYQQTG+LG KSD+YSLGVMLLQ+IT KPPMG++  V  AIEKG  +++LDP+V DWPV+EA + A L L+CCELR++DRPDL KVILPEL+RLR+  
Sbjct:   11 SSLDGSTSTTVIAIDRDKNSQYAVKWAVDNVLSKSSHCILIHVRNQSFLPLDFEEIPKEGRPPTEAELQQLFLPYRGFCARKGIEAKEVILHDIEVSSALIDYISNNSISNIVVGASNRNALTRKFRNADVPSTLLKSAPGFCAVYVISKG----KVQTARQAGQPQTPTGTANFNAANSGQHSQRGLHVPNVPPNTQDLEDKNRTSLSHGSRRSVGSDRASFDRSS-----------DSLMMTP-NSHYRSSSRSDPTLSMDSFVSATSSQRNSDVSWSLSCQTNNTSVEAFDSFVSSDSPGSSGSSQTPWLTVLSRVYGHAVRNVNHGTPVSLQKGLEVEMKRLKHELMQTMEMYNTACREAIVAQKRARELQQLKSAEERKLEQAKLAEEAALALAEVEKQKSKAATEAAEMAQRLADMEVQRRMNAELRARQESEERMKAMDALAHGIFKYRIYTIEEIEAATDDFRNSLKIGEGGYGPVFKGVLDHTVVAIKVLRPDMPQGQKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDNGSLEDRIFRKGNTPPIPWQIRFKIAAEISTALLFLHQTKPEPLVHRDLKPANILLTQNYLSKISDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITAKPPMGLSHHVEDAIEKGRFAEILDPTVEDWPVQEALSLAKLALKCCELRKRDRPDLGKVILPELNRLRDIG 734    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4Y1R457 ((Protein kinase family protein {ECO:0000313|EMBL:BBG98827.1}))

HSP 1 Score: 780.015 bits (2013), Expect = 0.000e+0
Identity = 406/703 (57.75%), Postives = 512/703 (72.83%), Query Frame = 0
 
Query:   16 TAIAVDKDKNSPHAVRWAVDNQL-KKNASVFLVHVQTHVSHPTDD--VSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPTSSKPLSQSGYSSDSSSSFSQSSWKSGSEKTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPP-SVSNLNYMVRTKQMGSPNISFDSSEYSGLSSFQS-----ADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFACSDD 709
            T +A++KDKNS  AV+WAVDN L  KNA   L+HV++H  H  D   VSKDGR PTEAE+QQ FLPYRGFCARKGI   E+V+ D DV NALVD+VVRNSI  +VVG S+ +ALTR FR  DV T L K  P+ C+V+ +SKG ++Q  ++AT    P ++      +       SSF Q        +    + SS G    +K  DF  + P    SGSK+  P  SV++    V + ++   N     S++SG  SFQS      DFSM NS+ S+ S +S T S         ++ EM+RL+ ELKQTM+MY SA  E++ AK+K R++ +WK++E   + + K +EE AL L ++E++K +AA EAA+ A RLA +ET KR  AER A  EA E ++AMDAL ++ +RYR YTIEEIE AT+ F  S K+GEGGYGPV++ +LDHTAVAIKVL+PDI+QG+ QFQ+E+EVLSC+RHP+MVLL+GACPEYGCL+YEYMENGSLEDRLF K NTPPI W  RFKIAAEIATALLFLHQ+KPEPLVHRDLKPANILLDRNYVSKI+DVGLAR+VPPSVAD+VTQY +TAAAGTFCYIDPEYQQTGMLG KSD+YSLGVMLLQ+IT KP MG++ QV  AIEKG  +++LDP+V DWPV+EA ++A + L+CCELRR+DRPDL+ VILPEL+RLR+    ++
Sbjct:   34 TLVAINKDKNSQCAVKWAVDNLLGDKNAHCTLIHVRSHSFHHHDHGAVSKDGRPPTEAELQQFFLPYRGFCARKGIVAKEVVLHDIDVPNALVDYVVRNSICNIVVGASHHNALTRKFRPADVATSLLKSVPETCAVYVISKG-KIQTSRSATGPQTPKSNGATPRNNSSQRTPLSSFLQGV---PDLEDVISQGSSAGRISLDKRADFKHVLPKAHRSGSKTNSPTQSVTS----VTSDKLSHGNSISGGSDFSGPLSFQSNGSDNVDFSM-NSEGSINSFSSHTPS--------ALDAEMRRLRLELKQTMDMYTSACKEALAAKEKTRDLQKWKTSEEHKLEEAKLAEEAALALADVERQKSKAATEAARMAQRLAGMETHKRKIAERKAKQEAGERRRAMDALAQNHIRYRRYTIEEIELATDYFKISNKVGEGGYGPVYRAWLDHTAVAIKVLRPDISQGQRQFQQEVEVLSCIRHPHMVLLVGACPEYGCLIYEYMENGSLEDRLFLKSNTPPIPWGVRFKIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKIADVGLARLVPPSVADAVTQYRLTAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITAKPAMGLSHQVEEAIEKGAFAEILDPAVTDWPVEEALSYAKMALKCCELRRRDRPDLSTVILPELNRLRDLGMKNE 719    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1Q3CXQ6 ((Pkinase domain-containing protein/Usp domain-containing protein {ECO:0000313|EMBL:GAV84931.1}))

HSP 1 Score: 775.007 bits (2000), Expect = 0.000e+0
Identity = 412/712 (57.87%), Postives = 513/712 (72.05%), Query Frame = 0
 
Query:   14 ITTAIAVDKDKNSPHAVRWAVDNQLKKNAS-VFLVHVQTHVSHPTD--DVSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPTSSKPLSQSGY--------SSDSS-SSFSQSSWKS-GSEKTSFDKSSSDGSSYTNKSNDFNMMH-----PLDRHSGSKSPFPPSVSNLNYMVRTKQMGSPNISFDSSEYSGLS-SFQSADFSMDNSDRSLTSGTSKTNSYS--SSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREF 704
            + TAIA+D DKNS  AV+WAVDN L KN++   L+HV+    HP D     KDGR PT+ E+QQ FLPYRGFCARKGI   E+V+ D D+ +AL D+V+RNSIS +VVG SNR+ALTR F+N DVP+ L K AP+ C+VH ++KG +VQN ++ T    P T +K + +S +        S D+S ++FS +SW+S GS++ SFD+SS  GS          + H     PL R S   S   P  S               I+  ++++SG   S  SAD + +N + S+ S  S  +S S  + P    +E EM++LK ELKQ M+MYN+A  E++ AK+K +E++E K+ + R   + K +EE AL L ++++ K +AA+EAAQ A RLAE+E+QKR  AE  A YEA E K+AMD+L    + YR Y IEEIE AT  F+ S KIGEGGYGPV+K  ++HTAVAIKVL+P+I+QG  QFQ+E+EVLSCMRHPNMVLLLGACPEYGCLVYE+M+NGSLEDRLFRK NTPPI W+ RF+IAAEIATALLFLHQSKPEPLVHRDLKPANILLD NYVSKI+DVGLAR+VPPS AD VTQYHMTAAAGTFCYIDPEYQQTGMLG KSDLYSLGVMLLQLIT KPPMG+  QV  AIEKG I  +LDP+V  WPV+EA + A L L+CCELR++DRPDLA V+LPEL RLR+ 
Sbjct:   15 VVTAIAIDSDKNSQSAVKWAVDNLLHKNSTQCILIHVRCQSLHPQDFDGAGKDGRPPTQEELQQFFLPYRGFCARKGIEAKEVVLHDIDIPSALADYVIRNSISNIVVGASNRNALTRKFKNADVPSSLLKCAPESCAVHVIAKG-KVQNSRSGTPGPGPQTPTKDVRKSQFYLQPENPRSEDASRTTFSHNSWRSEGSDRISFDRSS--GSFQVKPWGLSKLSHVIPSPPLSRSSTESSGHLPGNS---------------ITDSTNDFSGWPPSLYSADINAENLEFSVASEDSSRSSLSPHTPPC---LEAEMRKLKLELKQHMDMYNTACKEAVFAKKKAKELEECKAGDERKTEEAKLAEEAALALAKIQQHKTKAAVEAAQMAQRLAEMESQKRKVAEAKAKYEAIERKRAMDSLA-PNIMYRKYAIEEIEVATEYFASSKKIGEGGYGPVYKATINHTAVAIKVLRPNISQGLRQFQQEVEVLSCMRHPNMVLLLGACPEYGCLVYEHMKNGSLEDRLFRKDNTPPIPWKARFRIAAEIATALLFLHQSKPEPLVHRDLKPANILLDHNYVSKIADVGLARLVPPSAADCVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDLYSLGVMLLQLITAKPPMGLGHQVEEAIEKGTILDILDPAVTHWPVEEALSLAKLALKCCELRKRDRPDLASVVLPELIRLRDL 704    
BLAST of XM_017362333.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5UDN8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0
Identity = 409/706 (57.93%), Postives = 514/706 (72.80%), Query Frame = 0
 
Query:   16 TAIAVDKDKNSPHAVRWAVDNQL-KKNASVFLVHVQTHVSHPTDD--VSKDGRAPTEAEMQQIFLPYRGFCARKGIRGTEIVVTDTDVTNALVDFVVRNSISTLVVGGSNRSALTRAFRNPDVPTCLGKIAPDFCSVHAVSKGGRVQNIKTATRAARPPTSSKPLSQSGYSSDSSSSFSQ-SSWKSGSE--KTSFDKSSSDGSSYTNKSNDFNMMHPLDRHSGSKSPFPP-SVSNLNYMVRTKQMGSPNISFDSSEYSGLSSFQS-----ADFSMDNSDRSLTSGTSKTNSYSSSPLGEEIENEMKRLKQELKQTMEMYNSAYNESMTAKQKVREIDEWKSTETRMIAQKKRSEEDALVLMEMEKRKCRAAMEAAQKAHRLAELETQKRITAERLAAYEAEEMKKAMDALTRSGVRYRTYTIEEIEEATNRFSESAKIGEGGYGPVFKGYLDHTAVAIKVLKPDIAQGKEQFQKEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKHNTPPISWRTRFKIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARMVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGTKSDLYSLGVMLLQLITGKPPMGITGQVSSAIEKGDISQVLDPSVPDWPVKEATAFANLCLQCCELRRKDRPDLAKVILPELDRLREFACSDD 709
            T +A++KDKNS  AV+WAVDN L  KNA   L+HV++H  H  D   VSKDGR PTEAE+QQ FLPYRGFCARKGI   E+V+ D DV NALVD+VVRNSI  +VVG S+ +ALTR FR  DV T L K  P+ C+V+ +SKG     I+T+  A  P T   P S +    ++SS  +  SS+  G    +    + SS G    +K+ DF  + P    SGSK+  P  SV++      + ++   N     S++SG  SFQS      DFSM NS+ S+ S +S T S         ++ EM+RL+ ELKQTM+MY SA  E++ AK+K R++ +WK++E   + + K +EE AL L + E++K +AA EAA+ A RLA +ET KR  AER A  EA E ++AMDAL ++ +RYR YTIEEIE AT+ F  S K+GEGGYGPV++ +LDHTAVAIKVL+PDI+QG+ QFQ+E+EVLSC+RHP+MVLL+GACPEYGCL+YEYMENGSLEDRLF K NTPPI W  RFKIAAEIATALLFLHQ+KPEPLVHRDLKPANILLDRNYVSKI+DVGLAR+VPPSVAD+VTQY MTAAAGTFCYIDPEYQQTGMLG KSD+YSLGVMLLQ+IT  P MG++ QV  AIEKG  +++LDP+V DWPV+EA ++A + L+CCELRR+DRPDL+ VILPEL+RLR+    ++
Sbjct:   16 TLVAINKDKNSQCAVKWAVDNLLGDKNAHCTLIHVRSHSFHHHDHGAVSKDGRPPTEAELQQFFLPYRGFCARKGIVAKEVVLHDIDVPNALVDYVVRNSICNIVVGASHHNALTRKFRPADVATSLLKSVPETCAVYVISKG----KIRTSRSATGPQT---PKSNAATPRNNSSQRTPLSSFLHGVPDFEDVISQGSSAGRISLDKTADFKHVPPKAHRSGSKTNSPTQSVTSAT----SDKLSHGNSISGGSDFSGPCSFQSNGSDNVDFSM-NSEGSINSFSSHTPS--------ALDAEMRRLRLELKQTMDMYTSACKEALAAKEKTRDLQKWKTSEEHKLEEAKLAEEAALALADAERQKSKAATEAARMAQRLAGMETHKRKIAERKAKQEAGERRRAMDALAQNHIRYRRYTIEEIELATDYFKISNKVGEGGYGPVYRAWLDHTAVAIKVLRPDISQGQRQFQQEVEVLSCIRHPHMVLLVGACPEYGCLIYEYMENGSLEDRLFLKSNTPPIPWGVRFKIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKIADVGLARLVPPSVADAVTQYRMTAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITANPAMGLSHQVEEAIEKGAFAEILDPAVTDWPVEEALSYAKMALKCCELRRRDRPDLSTVILPELNRLRDLGMKNE 701    
Match NameStatsDescription
A0A5B7BVE7E-Value: 0.000e+0, PID: 62.87(Putative U-box domain-containing protein 52 isofo... [more]
A0A5B7BV82E-Value: 0.000e+0, PID: 61.86(Putative U-box domain-containing protein 52 isofo... [more]
A0A5J5BC75E-Value: 0.000e+0, PID: 61.64Protein kinase domain-containing protein {ECO:0000... [more]
A0A2R6R0A2E-Value: 0.000e+0, PID: 60.56(Serine/threonine-protein kinase {ECO:0000313|EMBL... [more]
A0A7J7FUM6E-Value: 0.000e+0, PID: 60.03Protein kinase domain-containing protein {ECO:0000... [more]
A0A6P5SJV3E-Value: 0.000e+0, PID: 57.75(U-box domain-containing protein 52-like {ECO:0000... [more]
A0A7N2LK79E-Value: 0.000e+0, PID: 55.14Protein kinase domain-containing protein {ECO:0000... [more]
A0A4Y1R457E-Value: 0.000e+0, PID: 57.75(Protein kinase family protein {ECO:0000313|EMBL:B... [more]
A0A1Q3CXQ6E-Value: 0.000e+0, PID: 57.87(Pkinase domain-containing protein/Usp domain-cont... [more]
A0A6J5UDN8E-Value: 0.000e+0, PID: 57.93Protein kinase domain-containing protein {ECO:0000... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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