Resource Type:
Polypeptide
Name:
XM_017367610.1
Identifier:
XM_017367610.1-protein
Sequence:
MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGL
SILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLA
NLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLR
QTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAA
AVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFK
WIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVP
KDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLV
IITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDR
KVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKN
SNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERS
SAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISIS
SLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVL
KHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARM
AEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDS
QSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRN
TESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGDLLDRDTEATI
REGKPCKRIVLHYHDIIFNGTNKENATSAISANATALGKFKFGQLVIFDD
PLTEDQNLLSPPVARAQGLYFYDMKSTYNAWFSCTLIFNSTQHTGTINMM
GADMMDSETRDLSVVGGTGDFFMTRGIATFTTDTFQGAAYFRLKMDIKLY
ECY
Sequence Length:
953
Sequence Checksum:
b59e7a74bf70bf4dc1b848ea002c1536
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367610.1, derives from mRNA, XM_017367610.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834TXJ5 ((Cation/H(+) antiporter 18-like {ECO:0000313|EMBL:KAF7828191.1}))
HSP 1 Score: 1328.54 bits (3437), Expect = 0.000e+0
Identity = 665/957 (69.49%), Postives = 787/957 (82.24%), Query Frame = 0
Match: A0A834TXJ5 ((Cation/H(+) antiporter 18-like {ECO:0000313|EMBL:KAF7828191.1}))
HSP 1 Score: 1328.54 bits (3437), Expect = 0.000e+0
Identity = 665/957 (69.49%), Postives = 787/957 (82.24%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVE-LESLREIIPVERNADLS-AKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNT--ESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGDLLDRDTEATIREGKPCKRIVLHYHDIIFNGTNKENATSAISANATALGKFKFGQLVIFDDPLTEDQNLLSPPVARAQGLYFYDMKSTYNAWFSCTLIFNSTQHTGTINMMGADMMDSETRDLSVVGGTGDFFMTRGIATFTTDTFQGAAYFRLKMDIKLYECY 953
MA+N T CP PMKATSNGVFQGD+PLD+ALPLAILQIC+V++VTR L+ LL+PLRQPRVIAEIVGGI+LGPS LGRNK YL A+FP KS+TVLDTLANLGLLFFLFL GLELDP+SLRRTGK A+ IA+AGI +PF +GIGTS+ LR TI++GV+ F VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAWILLALA+ALSG SP+VS WV LSGC FV+ LI+PPIF + KR +GEPVDE YICATL IVLAA FVTDAIGIHA+FGAFV+G+LVPK P AGALVEKVEDLVSGL LPLYFVSSGLKTNVATI GL SWGLLVLVI TAC GKIV T++VSL C+ PL EALA+GFLMN+KGLVELIVLNIGKDRKVLNDQTFAIMVLMA+FTTFITTP+VMA+YKP++R + +YKHRTIERK+ N+QLR+L CFHS+R+IPS++NL+EASRG+ KREGLC+YA+HL EL+ERSSAILMVHKAR+NGLPFWN+ +D+NQ+VVAFE F QLS+VS+RPM +IS+++++HEDIC +A K+AA+II+PFHKH R+DG+ E++R++F VN RVL+HA CSVGI VDRGLGG+TH+ ASNVS +VTVLFFGG DDREALAYG RMAEHPGI L ++ F+ LE+ EI+ ++ N S K S D++FL E K S N + +EEK VRN E V + E++RC+LFLVGR+ EGE+A+ALN N E PELG V LLTS EFST+AS+LVVQ+Y + T ++ KPCKR VL YHDI+ G + NATS +AN+T LG + G LVIFDDP+T+D+NL SPPVA+A G YFYD K TYNAWF+ TLIFNS++H GTIN+MGAD+M +TRDLSVVGGTGDFF+TRGIATF TD +G YFRLKMDIKLYECY
Sbjct: 1 MATNIT---QCPSPMKATSNGVFQGDSPLDYALPLAILQICLVVVVTRILAFLLKPLRQPRVIAEIVGGIILGPSVLGRNKAYLNAVFPSKSLTVLDTLANLGLLFFLFLVGLELDPKSLRRTGKKAIGIALAGITVPFVLGIGTSFALRATISEGVSKAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGRSPLVSLWVLLSGCAFVLGCILIIPPIFNRMAKRSLEGEPVDELYICATLTIVLAASFVTDAIGIHALFGAFVVGVLVPKKGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTNVATIHGLLSWGLLVLVIFTACFGKIVSTIVVSLLCRAPLQEALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPLVMAVYKPAKRKTEAEYKHRTIERKDPNSQLRLLVCFHSTRNIPSMLNLIEASRGIGKREGLCLYALHLMELTERSSAILMVHKARKNGLPFWNRTPGSDANQIVVAFEAFEQLSRVSIRPMTAISAMANIHEDICASAGRKKAAMIIIPFHKHLRVDGTFESSRSEFRWVNQRVLEHAPCSVGILVDRGLGGSTHIAASNVSSAVTVLFFGGPDDREALAYGLRMAEHPGISLNIVYFLARSLETDGEIVNIDMNMKSSCTKEESWDEKFLAEVKQKISGNSRVKFEEKGVRNFGEIVEVGREYSRCNLFLVGRMAEGEVAVALNNNVKCECPELGAVCNLLTSPEFSTSASLLVVQKYQAEIVHYVA------YRKTSKQPKPCKRFVLFYHDILLFGKDTVNATSVAAANSTKLGNSEMGLLVIFDDPITKDRNLHSPPVAKANGFYFYDTKDTYNAWFAYTLIFNSSEHKGTINIMGADLMGEKTRDLSVVGGTGDFFLTRGIATFQTDAVEGTKYFRLKMDIKLYECY 948
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1R3IAP7 ((Cation/H+ exchanger {ECO:0000313|EMBL:OMO79672.1}))
HSP 1 Score: 1275 bits (3298), Expect = 0.000e+0
Identity = 614/790 (77.72%), Postives = 695/790 (87.97%), Query Frame = 0
Match: A0A1R3IAP7 ((Cation/H+ exchanger {ECO:0000313|EMBL:OMO79672.1}))
HSP 1 Score: 1275 bits (3298), Expect = 0.000e+0
Identity = 614/790 (77.72%), Postives = 695/790 (87.97%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGD 790
MASN T+GQ CP PMKATSNG+FQGDNPLDFALPLAILQIC+V+++TRGL+ LLRPLRQPRVIAEI+GGILLGPS LGR+K YLQA+FPPKS+TVLDTLAN+GL+FFLFLAGLE+DP++LRRTGK AL IA+AGIGLPF +GIG+S++LR TI+KGVN +AF VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAW+LLALAVALSG+N SPIVS WV LSGC FV+C LIVPPIFKW+ RCH+GEPV+E YICATLA+VLAAG TDAIGIHAMFGAFV+G+L PK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLL LVI TAC GKIVGTV+VSLS K+P+ EALA+GFLMN+KGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTP+VMA+YKPS RGRK DYKHR+IERKN +TQLRILACFHS+R+IPS+INLLEASRG+ KREGL VYA+HL ELSERSSAILMVHKAR+NGLPFWNKG R+DS+ VVVAFE F QLSQVSVRPM SISS++DMHEDICTTAE K+AAIIILPFHKHQR+DGSLETTRTDF VN RVL+HA CSVGIF+DRGLGGTTHV A NVSYS+TVLFFGG DDREALAYG RMAEHPGI L VI F+VE E++ EI ++ + +S D+E L+EFK + S+ YEE+ VRN ET+ I RC+LFLVGR+P+GELALAL R +E PELGPVG LL + +FSTTASVLV+QQY+ +LS +
Sbjct: 1 MASNATVGQKCPSPMKATSNGLFQGDNPLDFALPLAILQICLVVVLTRGLAFLLRPLRQPRVIAEIIGGILLGPSVLGRSKSYLQAVFPPKSLTVLDTLANIGLIFFLFLAGLEIDPKALRRTGKTALGIALAGIGLPFALGIGSSFLLRATISKGVNASAFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWVLLALAVALSGSNSSPIVSLWVLLSGCAFVICLSLIVPPIFKWMAHRCHEGEPVEEVYICATLAVVLAAGLATDAIGIHAMFGAFVVGVLFPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLALVIFTACFGKIVGTVVVSLSFKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPVVMAVYKPS-RGRKEDYKHRSIERKNPDTQLRILACFHSARNIPSMINLLEASRGVAKREGLSVYALHLMELSERSSAILMVHKARKNGLPFWNKGRRSDSDHVVVAFEAFQQLSQVSVRPMTSISSMADMHEDICTTAESKKAAIIILPFHKHQRMDGSLETTRTDFRWVNKRVLEHAPCSVGIFIDRGLGGTTHVSARNVSYSITVLFFGGHDDREALAYGTRMAEHPGISLNVIHFVVEPETIGEISAIDMQENSGLNSMSLDEECLSEFKQKILKDNSVKYEERAVRNATETIAAIHGIGRCNLFLVGRMPDGELALALKRRSECPELGPVGSLLITPDFSTTASVLVIQQYHGSLSVNLAS 789
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1R3IR76 ((Cation/H+ exchanger {ECO:0000313|EMBL:OMO85093.1}))
HSP 1 Score: 1272.69 bits (3292), Expect = 0.000e+0
Identity = 618/804 (76.87%), Postives = 705/804 (87.69%), Query Frame = 0
Match: A0A1R3IR76 ((Cation/H+ exchanger {ECO:0000313|EMBL:OMO85093.1}))
HSP 1 Score: 1272.69 bits (3292), Expect = 0.000e+0
Identity = 618/804 (76.87%), Postives = 705/804 (87.69%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYE----NLSTDFGDLL-DRDTEAT 799
MASN T+GQ CP PMKATSNG+FQGDNPLDFALPLAILQIC+V+++TRGL+ LLRPLRQPRVIAEI+GGILLGPS LGR+K YLQA+FPPKS+TVLDTLAN+GL+FFLFLAGLE+DP++LRRTGK AL IA+AGIGLPF +GIG+S++LR TI+KGVN +AF VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAW+LLALAVALSG+ SPIVS WV LSGC FV+C LIVPPIFKW+ RCH+GEPV+E YICATLA+VLAAGF TDAIGIHAMFGAFV+G+L PK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLL LVI TAC GKIVGTV+VSLS K+P+ EALA+GFLMN+KGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTP+VMA+YKP+ RGRK DYKHR+IERKN +TQLRILACFHS+R+IPS+INLLEASRG+ KREGL VYA+HL ELSERSSAILMVHKAR+NGLPFWNKG R+DS+ VVVAFE F QLSQVSVRPM SISS++DMHEDICTTAE K+AAIIILPFHKHQR+DGSLETTRTDF VN RVL+HA CSVGI VDRGLGGTTHV ASNV+YS+TVLFFGG DDREALAYG RMAEHPGI L VIRF+VE E++ EI ++ + K +S D+E L+EFK + S+ YEE+ VR+ ET+ I RC+LFLVGR+P+GELALAL R +E PELGPVG LL +FSTTASVLV+QQY+ NL++D + ++DTE++
Sbjct: 1 MASNATVGQKCPSPMKATSNGLFQGDNPLDFALPLAILQICLVVVLTRGLAFLLRPLRQPRVIAEIIGGILLGPSVLGRSKGYLQAVFPPKSLTVLDTLANIGLIFFLFLAGLEIDPKALRRTGKTALGIALAGIGLPFALGIGSSFLLRATISKGVNASAFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWVLLALAVALSGSKSSPIVSLWVLLSGCAFVICLSLIVPPIFKWMAHRCHEGEPVEEVYICATLAVVLAAGFATDAIGIHAMFGAFVVGVLFPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLALVIFTACFGKIVGTVVVSLSFKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPVVMAVYKPA-RGRKEDYKHRSIERKNPDTQLRILACFHSARNIPSMINLLEASRGVAKREGLSVYALHLMELSERSSAILMVHKARKNGLPFWNKGRRSDSDYVVVAFEAFQQLSQVSVRPMTSISSMADMHEDICTTAESKKAAIIILPFHKHQRMDGSLETTRTDFRWVNKRVLEHAPCSVGILVDRGLGGTTHVSASNVAYSITVLFFGGHDDREALAYGTRMAEHPGISLNVIRFVVEPETIGEISAIDMQENSGLKSMSLDEECLSEFKQRILKDNSVKYEERAVRDATETIAAIRGVGRCNLFLVGRMPDGELALALRRRSECPELGPVGSLLIIPDFSTTASVLVIQQYHGSSSVNLASDMEEESPEKDTESS 803
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5BGN8 ((Disease resistance response protein {ECO:0000313|EMBL:PON47949.1}))
HSP 1 Score: 1260.36 bits (3260), Expect = 0.000e+0
Identity = 661/963 (68.64%), Postives = 750/963 (77.88%), Query Frame = 0
HSP 2 Score: 176.407 bits (446), Expect = 1.533e-42
Identity = 96/227 (42.29%), Postives = 133/227 (58.59%), Query Frame = 0
Match: A0A2P5BGN8 ((Disease resistance response protein {ECO:0000313|EMBL:PON47949.1}))
HSP 1 Score: 1260.36 bits (3260), Expect = 0.000e+0
Identity = 661/963 (68.64%), Postives = 750/963 (77.88%), Query Frame = 0
Query: 1 MASNGT--IGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGDLLDRDTEATIREGKPCKRIVLHYHDIIFNGTNKENATSAIS-------ANATALG-KFKFGQLVIFDDPLTEDQNLLSPPVARAQGLYFYDMKSTYNAWFSCTLIFNSTQHTGTINMMGADMMDSETRDLSVVGGTGDFFMTRGIATFTTDTFQGAAYFRLKMDIKLYECY 953
MA N T +G CP PMKATSNG FQGD+PL FA PLAILQIC+VL+VTR L++L+RPLRQPRVIAEI+GGILLGPSALGRN+ YL IFPPKS+TVL+TLANLGLLFFLFLAGLELDP+S+RRTGK AL IA+AGI LPF +GIG+S++LRQTI+KGVN AF VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAWILLALA+ALSG SP SFWVFLSGC FV+C LI PPIFKW+ +RCH+GEPVDE YICATLA VLAAGF+TD IGIHAMFGAFVIG+LVPKD PLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATI+GLQSWGL VLV TAC GKI GTV+VSLSCK+P EALA+GFLMN+KGLVELIVLNIGKDRKVLNDQTF+IMVLMA+FTTFITTP V+A+YKP++R R +YK+RT+ER+ NTQLRILACFHS+R+IPS++NLLEASRG +KRE LCVYA+HL ELSERSSAILMVHKARRNGLPFWNKG R DS VVVAFET+ QL +VS+RPM +ISS+SDMHEDICTTA+GKRAAIIILPFHKHQRLDGSLE TR+DF VN RVL+HA CSVG+FVDRGLGGT+HV ASNVS VTVLFFGGRDDREALAYGARMAEHPGIRL V+RF+VE E EI V+ D SA + S D+EFL +FK ++ + S+ YEEK V+N + + +I E C+LFLVGR+P GE+ALALNR +E PELGPVG LLTS + STTASVLVVQQY NG N S + AN T L +F FG + DDP+T D NL S PVA C + S T M+ +TR +SVVGGTGDFFM RGIAT TD F+G YFRL++DIK YE +
Sbjct: 1 MAVNITEGVGAPCPTPMKATSNGAFQGDDPLHFAFPLAILQICLVLVVTRVLALLMRPLRQPRVIAEIIGGILLGPSALGRNQTYLHKIFPPKSLTVLETLANLGLLFFLFLAGLELDPKSIRRTGKKALLIAIAGISLPFALGIGSSFILRQTISKGVNSAAFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWILLALAIALSGTGQSPFTSFWVFLSGCIFVICCVLIAPPIFKWMAQRCHEGEPVDEMYICATLAAVLAAGFITDTIGIHAMFGAFVIGVLVPKDGPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIRGLQSWGLFVLVTFTACFGKIFGTVMVSLSCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFSIMVLMAIFTTFITTPAVIAVYKPAKRARIANYKYRTVEREYPNTQLRILACFHSTRNIPSLLNLLEASRGTEKREELCVYALHLMELSERSSAILMVHKARRNGLPFWNKGRRLDSGNVVVAFETYRQLGRVSIRPMTAISSMSDMHEDICTTADGKRAAIIILPFHKHQRLDGSLEVTRSDFRWVNRRVLEHAPCSVGVFVDRGLGGTSHVAASNVSSFVTVLFFGGRDDREALAYGARMAEHPGIRLMVVRFLVEPEISGEISRVDIERDSSANVCSVDNEFLAKFKKDKAEDNSVQYEEKPVQNTEQVISVIREIGHCNLFLVGRMPAGEVALALNRRSECPELGPVGSLLTSPDSSTTASVLVVQQY--------------------------------------NGQEPLNLASDTAIVAAPQGANLTILASQFHFGTVAALDDPITLDNNLQSEPVA------------------PCRVGAPSASTEPTRIMV-------KTRGISVVGGTGDFFMHRGIATIMTDAFEGEVYFRLRVDIKFYEFF 900
HSP 2 Score: 176.407 bits (446), Expect = 1.533e-42
Identity = 96/227 (42.29%), Postives = 133/227 (58.59%), Query Frame = 0
Query: 745 LALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGDLLDRDTEATIR----EGKPCKRI--------VLHYHDIIFNGTNKENATSAI-----SANATAL-GKFKFGQLVIFDDPLTEDQNLLSPPVARAQGLYFYDMKSTYNAWFSCTLIFNSTQHTGTINMMGADMMDSETRDLSVVGGTGDFFMTRGIATFTTDTFQGAAYFRLKMDIKLYECY 953
+ L+ N +S + P C + + ST + ++V+ ++ GD ATI EG+ R+ ++HDII+NG N ENAT+ I AN T L G FG LV FDDP+T D NL S PV RAQG Y YD K + AW + +FNST+H G+++ GAD + ++TRD+ V+GGTG+F M RG+AT TD F+G YFRL++DIKLYEC+
Sbjct: 824 ITLDNNLQSEPVAP--CRVGAPSASTEPTRIMVKTRGISVVGGTGDFFMHRGIATIMTDAFEGEVYFRLRVDIKFYEFFYFHDIIYNGENFENATATIIGSPSWANKTKLAGLNHFGDLVAFDDPITLDNNLHSTPVGRAQGFYLYDKKDVFTAWLGFSFVFNSTEHKGSLSFAGADPLMNKTRDIPVIGGTGEFLMARGVATLMTDAFEGEVYFRLRVDIKLYECW 1048
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061G5P7 ((Cation/H+ exchanger 18 isoform 1 {ECO:0000313|EMBL:EOY24906.1}))
HSP 1 Score: 1258.82 bits (3256), Expect = 0.000e+0
Identity = 610/804 (75.87%), Postives = 697/804 (86.69%), Query Frame = 0
Match: A0A061G5P7 ((Cation/H+ exchanger 18 isoform 1 {ECO:0000313|EMBL:EOY24906.1}))
HSP 1 Score: 1258.82 bits (3256), Expect = 0.000e+0
Identity = 610/804 (75.87%), Postives = 697/804 (86.69%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGDLL-----DRDTEAT 799
M SN T+GQ CP PMKATSNG+FQGDNPLD+ALPLAILQIC+V+++TRGL+ LLRP+RQPRVIAEI+GGILLGPS LGR+K YLQAIFPPKS+TVLDTLAN+GL+FFLFLAGLE+D ++LRRTGK AL IA+AGIGLPF +GIG+S++L+ TI+KGVN +AF VFMGVALSITAFPVLARILAELKLLTTD+GR+AMSAAAVNDVAAWILLALAVALSG+N SP S WVFLSGC FV+C IVPPIFKW+ RCH+GEPV+E YICATLA VLAAGFVTDAIGIHAMFGAFV+G++ PK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTN+ATIQGLQSWGLL LVI TAC GKIVGTV+VSLSCK+P EA A+GFLMN+KGLVELIVLNIG+DRKVLNDQTFAIMVLMALFTTFITTP+VMA+YKP+ R RK DYKHRTIERKN +TQLRIL CFHSSR+IPS+INLLEASRG+ KREG VYA+HL ELSERSSAILMVHKAR+NGLPFWNKG +DS+ +VVAFE F QLSQV+VR M SISS++DMHEDICTTAE KRAAIIILPFHKHQR+DGS ETTRTDF VN RVL+HA CS+GI VDRGLGGTTHV ASNVS S+TVLFFGG DDREALAYGARMAEHPGI L VIRF+VE E++ EI ++ + K +S D+EFL++FK SN+ S+ YEEK VRN ET I E +RC+L LVGR+P+GELALAL R +E PELGPVGCLL S +FS TASVLVVQQY+ +S + + D+D+E++
Sbjct: 1 MVSNATVGQKCPSPMKATSNGLFQGDNPLDYALPLAILQICLVVVLTRGLAFLLRPIRQPRVIAEIIGGILLGPSVLGRSKSYLQAIFPPKSLTVLDTLANIGLIFFLFLAGLEIDLKALRRTGKTALGIAVAGIGLPFALGIGSSFLLKATISKGVNASAFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAVALSGSNSSPAASLWVFLSGCVFVICLSFIVPPIFKWMAYRCHEGEPVEEMYICATLAAVLAAGFVTDAIGIHAMFGAFVVGVVFPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIQGLQSWGLLALVIFTACFGKIVGTVVVSLSCKVPAREAFALGFLMNTKGLVELIVLNIGRDRKVLNDQTFAIMVLMALFTTFITTPVVMAVYKPA-RSRKVDYKHRTIERKNPDTQLRILTCFHSSRNIPSMINLLEASRGVGKREGFSVYALHLMELSERSSAILMVHKARKNGLPFWNKGRHSDSDHIVVAFEAFQQLSQVTVRSMTSISSMADMHEDICTTAERKRAAIIILPFHKHQRMDGSFETTRTDFRWVNQRVLEHAPCSIGILVDRGLGGTTHVSASNVSLSMTVLFFGGCDDREALAYGARMAEHPGISLNVIRFVVEPETIGEIARIDMQENSGLKSMSLDEEFLSKFKQKISNDDSVRYEEKAVRNATETFAAIREASRCNLVLVGRMPDGELALALMRRSECPELGPVGCLLISPDFSATASVLVVQQYHGRVSLNLASDMEEESPDKDSESS 803
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N5G0D2 ((Cation/H(+) antiporter 18-like {ECO:0000313|EMBL:KAB2608826.1}))
HSP 1 Score: 1255.74 bits (3248), Expect = 0.000e+0
Identity = 620/788 (78.68%), Postives = 699/788 (88.71%), Query Frame = 0
Match: A0A5N5G0D2 ((Cation/H(+) antiporter 18-like {ECO:0000313|EMBL:KAB2608826.1}))
HSP 1 Score: 1255.74 bits (3248), Expect = 0.000e+0
Identity = 620/788 (78.68%), Postives = 699/788 (88.71%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDF 788
MASN ++G TCP PMKATSNG FQGD+PL FALPL ILQIC+V+IVTRGL+ LL+PLRQPRVIAEIVGGILLGPSALGRNK YLQAIFPPKSITVLDTLANLGLLFFLFLAGLE+DP+S+R+TGK ALAIA+AGI LPF +GIG+S+VLR+TIAKGV+ TAF VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAWILLALAVALSGNN SP+V WVFLSGC FV+C+ LIVPPIFKW+ +RC +GEPVDE Y+CATL +VLAAGF+TD IGIHAMFGAFV+G+LVPK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVI TAC GKI GT++VSLSCK+P+ EALA+GFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTP+V+A+YKP++RGR DYKH+TIERKN+NTQLRILACFHS+R+IPSIINLLEASRG +KREGLCVYAMHLKELSERSSAILMVH+ARRNGLPFWNKG +++S+ VVVAFE + QLS+VS+RPM ISS SDMHEDIC TAE KRAAI+ILPFHKHQRLDG+LETTR DF VN RVL++A CSVGI VDRGLGG TH+ ASNVSY +TVLFFGGRDDREALAYGARMAEHPGI L VIRF+VE E EI + + + K+ S D+EFLTEFK + + S+TYEEK VRN A+T+ ++ E +C LFLVGR P+GE+ALALNR +E PELGPVG LL S +FST+ASVLVVQQY +S D
Sbjct: 1 MASNASVGHTCPPPMKATSNGAFQGDSPLHFALPLVILQICIVVIVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLQAIFPPKSITVLDTLANLGLLFFLFLAGLEIDPKSIRQTGKQALAIAVAGITLPFALGIGSSFVLRETIAKGVDATAFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWILLALAVALSGNNQSPLVPLWVFLSGCAFVICAILIVPPIFKWMSQRCQEGEPVDEIYVCATLTVVLAAGFITDTIGIHAMFGAFVVGVLVPKEGPYAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIFTACFGKIFGTIMVSLSCKLPVREALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVVAVYKPTKRGRMADYKHKTIERKNTNTQLRILACFHSARNIPSIINLLEASRGTNKREGLCVYAMHLKELSERSSAILMVHRARRNGLPFWNKGQQSNSDNVVVAFEAYQQLSRVSIRPMTEISSTSDMHEDICATAESKRAAIVILPFHKHQRLDGTLETTRNDFRFVNQRVLQYAPCSVGILVDRGLGGATHIAASNVSYFITVLFFGGRDDREALAYGARMAEHPGISLMVIRFLVEPELAGEISSINIDGNARTKVGSVDEEFLTEFKQKIAKDDSVTYEEKAVRNEAQTISVVREIGQCHLFLVGRTPDGEVALALNRRSECPELGPVGSLLISPDFSTSASVLVVQQYNGQVSLDL 788
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A540LKR6 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1251.11 bits (3236), Expect = 0.000e+0
Identity = 618/788 (78.43%), Postives = 697/788 (88.45%), Query Frame = 0
Match: A0A540LKR6 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1251.11 bits (3236), Expect = 0.000e+0
Identity = 618/788 (78.43%), Postives = 697/788 (88.45%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDF 788
MASN ++G TCP PMKATSNG FQGD+PL FALPL ILQICVV+I TRGL+ L++PLRQPRVIAEIVGGILLGPSALGRNK YLQAIFPPKSITVLDTLANLGLLFFLFLAGLE+DP+S+R+TGK ALAIA+AGI LPF +GIG+S+VLR+TIAKGV+ TAF VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAWILLALAVALSG+N SP+V WVFLSGC FV+C+ LIVPPIFKW+ +RC +GEPVDE Y+CAT+ VLAAGF+TD IGIHAMFGAFV+G+LVPK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVI TAC GKI GT++VSLSCK+P+ EALA+GFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTP+V+A+YKP++RGR DYKH+TIERKN+NTQLRILACFHS+R+IPSIINLLEASRG +KREGLCVYAMHLKELSERSSAILMVH+ARRNGLPFWNKG +++S+ VVVAFE + QLS+VS+RPM ISS SDMHEDIC TAE KRAAI+ILPFHKHQRLDG+LET+R DF VN RVL++A CSVGI VDRGLGG TH+ ASNVSY +TVLFFGGRDDREALAYGARMAEHPGI L VIRF+VE E EI + + + K+ S D+EFLTEFK + + S+TYEEK VRN A+T+ +I E RC LFLVGR P+GE+ALALNR +E PELGPVG LL S +FST+ASVLVVQQY +S D
Sbjct: 1 MASNASVGNTCPPPMKATSNGAFQGDSPLHFALPLVILQICVVVIATRGLAYLMKPLRQPRVIAEIVGGILLGPSALGRNKSYLQAIFPPKSITVLDTLANLGLLFFLFLAGLEIDPKSIRQTGKQALAIAVAGITLPFALGIGSSFVLRETIAKGVDATAFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWILLALAVALSGSNQSPLVPLWVFLSGCAFVICAILIVPPIFKWMSQRCQEGEPVDEIYVCATITAVLAAGFITDTIGIHAMFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIFTACFGKIFGTIVVSLSCKLPVREALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVVAVYKPAKRGRMADYKHKTIERKNTNTQLRILACFHSARNIPSIINLLEASRGTNKREGLCVYAMHLKELSERSSAILMVHRARRNGLPFWNKGQQSNSDSVVVAFEAYQQLSRVSIRPMTEISSTSDMHEDICATAESKRAAIVILPFHKHQRLDGTLETSRNDFRFVNQRVLQYAPCSVGILVDRGLGGATHIAASNVSYFITVLFFGGRDDREALAYGARMAEHPGISLMVIRFLVEPELAGEISRINIDGNARTKVGSVDEEFLTEFKQKIAKDDSVTYEEKAVRNEAQTISVIREIGRCHLFLVGRTPDGEVALALNRRSECPELGPVGSLLISPDFSTSASVLVVQQYNGQVSLDL 788
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A498HZS0 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1248.03 bits (3228), Expect = 0.000e+0
Identity = 617/788 (78.30%), Postives = 696/788 (88.32%), Query Frame = 0
Match: A0A498HZS0 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1248.03 bits (3228), Expect = 0.000e+0
Identity = 617/788 (78.30%), Postives = 696/788 (88.32%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDF 788
MASN ++G TCP PMKATSNG FQGD+PL FALPL ILQIC+V+I TRGL+ L++PLRQPRVIAEIVGGILLGPSALGRNK YLQAIFPPKSITVLDTLANLGLLFFLFLAGLE+DP+S+R+TGK ALAIA+AGI LPF +GIG+S+VLR+TIAKGV+ TAF VFMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAWILLALAVALSG+N SP+V WVFLSGC FV+C+ LIVPPIFKW+ ++C +GEPVDE Y+CATL VLAAGF+TD IGIHAMFGAFV+G+LVPK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVI TAC GKI GT++VSLSCK+P+ EALA+GFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTP+V+A+YKP++RGR DYKH+TIERKN+NTQLRILACFHS+R+IPSIINLLEASRG +KREGLCVYAMHLKELSERSSAILMVH+ARRNGLPFWNKG +++S+ VVVAFE + QLS+VS+RPM ISS SDMHEDIC TAE KRAAI+ILPFHKHQRLDG+LETTR DF VN RVL++A CSVGI VDRGLGG TH+ ASNVSY +TVLFFGGRDDREALAYGARMAEHPGI L VIRF+VE E EI + + + K+ S D+EFLTEFK + + S+TYEEK VRN A+T+ +I E RC LFLVGR P+GE+ALALNR +E PELGPVG LL S + ST+ASVLVVQQY +S D
Sbjct: 1 MASNASVGNTCPPPMKATSNGAFQGDSPLHFALPLVILQICIVVIATRGLAYLMKPLRQPRVIAEIVGGILLGPSALGRNKSYLQAIFPPKSITVLDTLANLGLLFFLFLAGLEIDPKSIRQTGKQALAIAVAGITLPFALGIGSSFVLRETIAKGVDATAFLVFMGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDVAAWILLALAVALSGSNQSPLVPLWVFLSGCAFVICAILIVPPIFKWMSQQCQEGEPVDEIYVCATLTAVLAAGFITDTIGIHAMFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIFTACFGKIFGTIVVSLSCKLPVREALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVVAVYKPAKRGRMADYKHKTIERKNTNTQLRILACFHSARNIPSIINLLEASRGTNKREGLCVYAMHLKELSERSSAILMVHRARRNGLPFWNKGQQSNSDSVVVAFEAYQQLSRVSIRPMTEISSTSDMHEDICATAESKRAAIVILPFHKHQRLDGTLETTRNDFRFVNQRVLQYAPCSVGILVDRGLGGATHIAASNVSYFITVLFFGGRDDREALAYGARMAEHPGISLMVIRFLVEPELAGEISRINIDGNARTKVGSVDEEFLTEFKQKIAKDDSVTYEEKAVRNEAQTISVIREIGRCHLFLVGRTPDGEVALALNRRSECPELGPVGSLLISPDLSTSASVLVVQQYNGQVSLDL 788
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4E9F3 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1247.26 bits (3226), Expect = 0.000e+0
Identity = 616/789 (78.07%), Postives = 696/789 (88.21%), Query Frame = 0
Match: A0A4S4E9F3 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1247.26 bits (3226), Expect = 0.000e+0
Identity = 616/789 (78.07%), Postives = 696/789 (88.21%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNR-NTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDF 788
MASNGT TCP PMKATSNGVFQGDNPLDFALPLAILQIC+V++VTRGL++LLRPLRQPRVIAEI+GGILLGPSALGRNK+YLQAIFPPKSIT+LDTLANLGLLFFLFL G+ELDP+SLRRTGK AL+IA+AG+ LPF +GIG+S+V+R+TIAKGV GT+F +FMGVALSITAFPVLARILAELKLLTTD+G+MAMSAAAVNDVAAWILLALA+ALSG N+SP+VS WVFL GC FV+CS LIVPPIFKW+ +RCH+GEPV+E Y+CATLA VLAAG +TDAIGIHAMFGAFVIG+LVPK+ P AGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQS G+LVLVI TAC GKIVGTV+VS ++P EALA+GFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMV+MALFTTFITTP+VMA+YKP++R K DYKHRTIERKN NTQLRILAC SSR+IPS+INL+EASRG++KREGLCVYA+HL ELSERSSAILM HKAR+N PFWN G +++SN VVVAFE F +LSQVSVRPM SISSLSDMHEDICTTAE KRAA IILPFHKHQRLDG+LETTR +F VN RVL+HA CSVGI +DRGLGG+ HV ASNV+Y +TVLFFGGRDDREALAYGARMAEHPGIRLTVIRF VE E + EI+ V+ + + + KL S D+E+L+EFK++ S + SI YEEK VRN E ++ E +RC LFLVGR P ELALALNR N+E PELGPVG LLTS +FS TASVLVVQQYY S +
Sbjct: 85 MASNGTTQHTCPLPMKATSNGVFQGDNPLDFALPLAILQICLVVVVTRGLALLLRPLRQPRVIAEIIGGILLGPSALGRNKNYLQAIFPPKSITLLDTLANLGLLFFLFLVGIELDPKSLRRTGKKALSIAIAGVSLPFILGIGSSFVIRETIAKGVGGTSFLIFMGVALSITAFPVLARILAELKLLTTDVGQMAMSAAAVNDVAAWILLALAIALSGKNLSPLVSVWVFLCGCVFVICSILIVPPIFKWMARRCHEGEPVEEMYVCATLAAVLAAGLITDAIGIHAMFGAFVIGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSCGVLVLVIFTACFGKIVGTVVVSALYRVPFREALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVVMALFTTFITTPLVMAVYKPAKRASKADYKHRTIERKNPNTQLRILACLRSSRNIPSVINLVEASRGVEKREGLCVYALHLMELSERSSAILMAHKARKNRQPFWNMGQQSNSNHVVVAFEAFRRLSQVSVRPMTSISSLSDMHEDICTTAERKRAAFIILPFHKHQRLDGTLETTRIEFRYVNKRVLEHAPCSVGILLDRGLGGSIHVSASNVAYFITVLFFGGRDDREALAYGARMAEHPGIRLTVIRFSVETEGVGEIVRVDVDGNSTTKLGSTDEEYLSEFKETISEDSSIKYEEKIVRNAVEATAVVREFSRCSLFLVGRSPFTELALALNRNNSECPELGPVGSLLTSPDFSITASVLVVQQYYNAASPNL 873
BLAST of XM_017367610.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251LMT0 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1246.49 bits (3224), Expect = 0.000e+0
Identity = 600/799 (75.09%), Postives = 697/799 (87.23%), Query Frame = 0
Match: A0A251LMT0 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1246.49 bits (3224), Expect = 0.000e+0
Identity = 600/799 (75.09%), Postives = 697/799 (87.23%), Query Frame = 0
Query: 1 MASNGTIGQTCPHPMKATSNGVFQGDNPLDFALPLAILQICVVLIVTRGLSILLRPLRQPRVIAEIVGGILLGPSALGRNKDYLQAIFPPKSITVLDTLANLGLLFFLFLAGLELDPRSLRRTGKNALAIAMAGIGLPFTIGIGTSYVLRQTIAKGVNGTAFFVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGNNVSPIVSFWVFLSGCGFVVCSFLIVPPIFKWIGKRCHQGEPVDETYICATLAIVLAAGFVTDAIGIHAMFGAFVIGILVPKDEPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIITACIGKIVGTVLVSLSCKMPLTEALAMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVMAIYKPSRRGRKTDYKHRTIERKNSNTQLRILACFHSSRSIPSIINLLEASRGMDKREGLCVYAMHLKELSERSSAILMVHKARRNGLPFWNKGLRTDSNQVVVAFETFCQLSQVSVRPMISISSLSDMHEDICTTAEGKRAAIIILPFHKHQRLDGSLETTRTDFHGVNMRVLKHAMCSVGIFVDRGLGGTTHVPASNVSYSVTVLFFGGRDDREALAYGARMAEHPGIRLTVIRFIVELESLREIIPVERNADLSAKLVSQDDEFLTEFKDSQSNNCSITYEEKFVRNVAETVGIIGEHNRCDLFLVGRLPEGELALALNRNTESPELGPVGCLLTSSEFSTTASVLVVQQYYENLSTDFGD-LLDRDTEA 798
MASN TIGQ CP PMKATSNGVFQGD+PLD+ALPLAILQIC+V+ +TRGL+ LRPLRQPRVIAEI+GGILLGPSALGR+K YL A+FPPKS+TVLDTLAN+GLLFF+FL GLELD +SLR+TGK ALA+A+AGI LPF IGIGTS++LR TI++GVNGT+F +FMGVALSITAFPVLARILAELKLLTTD+GRMAMSAAAVNDVAAWILLALA+ALSG+N SP++SFWV LSGC FV+C+ L+VPPIFK I +RCH+GEP++ETY+CATLA VLAAGFVTDA+GIHAMFGAFVIG+LVPK+ P A ALVEKVEDLVSGLFLPLYFVSSGLKTN+A I GLQSWGLL LVI TAC GKI GT +VSL CK+PL EA+AMG LMN+KGLVELIVLNIGKD+KVLNDQTFAIM+LMALFTTFITTP+V+A+YKP+RR R DYK+RTIERKNSNTQLRILACFHSSR+IPSIINLLEASRG+ K EGLCVYA+HL ELSERSSAILMVHKAR+NGLP WNKG R+DSN V+VAF+ F QLS+VSVR M +ISS+SD+HEDICTTAE KRA+ IILPFHKHQRLDGSLETTRTDF VN RVL+HA CSVGI VDRGLGGTT +PASNVSY +TVLFFGG DDREALAYGA MAEHPGI L V+RF+V + EI+ V R A+L KL S D++ L EFK S + SI YEE+ V + A T+ +I E +RC+LFLVGR+P+GE+ +NR+ E PELG +G LL+S +F TTASVLV+QQY + +++ GD ++D+D+E+
Sbjct: 1 MASNNTIGQMCPSPMKATSNGVFQGDSPLDYALPLAILQICLVIALTRGLAFFLRPLRQPRVIAEIIGGILLGPSALGRSKRYLHAVFPPKSLTVLDTLANIGLLFFMFLVGLELDTKSLRQTGKKALAVAIAGITLPFAIGIGTSFILRATISEGVNGTSFLLFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNHSPLISFWVLLSGCVFVICAILVVPPIFKTITRRCHEGEPINETYVCATLATVLAAGFVTDAVGIHAMFGAFVIGVLVPKEGPFAHALVEKVEDLVSGLFLPLYFVSSGLKTNIAEIHGLQSWGLLALVIFTACFGKIFGTFVVSLLCKVPLREAVAMGLLMNTKGLVELIVLNIGKDKKVLNDQTFAIMILMALFTTFITTPLVVAVYKPARRVRTADYKYRTIERKNSNTQLRILACFHSSRNIPSIINLLEASRGIQKTEGLCVYALHLMELSERSSAILMVHKARKNGLPVWNKGHRSDSNHVIVAFDAFQQLSRVSVRSMTAISSMSDLHEDICTTAERKRASFIILPFHKHQRLDGSLETTRTDFRWVNRRVLEHAPCSVGILVDRGLGGTTQIPASNVSYLITVLFFGGCDDREALAYGALMAEHPGISLMVVRFLVAPAAEGEIVQVNREANLETKLGSWDEKVLMEFKRKTSGDVSIRYEERVVTDAAGTIDVISEVSRCNLFLVGRIPDGEIPADINRSNECPELGTIGSLLSSYDFPTTASVLVIQQYNDQVTSQIGDHMVDKDSES 799
| Match Name | Stats | Description |
|---|---|---|
| A0A834TXJ5 | E-Value: 0.000e+0, PID: 69.49 | (Cation/H(+) antiporter 18-like {ECO:0000313|EMBL:... [more] |
| A0A1R3IAP7 | E-Value: 0.000e+0, PID: 77.72 | (Cation/H+ exchanger {ECO:0000313|EMBL:OMO79672.1}... [more] |
| A0A1R3IR76 | E-Value: 0.000e+0, PID: 76.87 | (Cation/H+ exchanger {ECO:0000313|EMBL:OMO85093.1}... [more] |
| A0A2P5BGN8 | E-Value: 1.533e-42, PID: 68.64 | (Disease resistance response protein {ECO:0000313|... [more] |
| A0A061G5P7 | E-Value: 0.000e+0, PID: 75.87 | (Cation/H+ exchanger 18 isoform 1 {ECO:0000313|EMB... [more] |
| A0A5N5G0D2 | E-Value: 0.000e+0, PID: 78.68 | (Cation/H(+) antiporter 18-like {ECO:0000313|EMBL:... [more] |
| A0A540LKR6 | E-Value: 0.000e+0, PID: 78.43 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A498HZS0 | E-Value: 0.000e+0, PID: 78.30 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A4S4E9F3 | E-Value: 0.000e+0, PID: 78.07 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A251LMT0 | E-Value: 0.000e+0, PID: 75.09 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |