MAFRRSLITRAKLFNQHKFAPSFQFILHQNDTDDSKTLNPQFSRQNRSFT
STGLFNTAFRNPEASYSVLNGLNLARNMSSSRAIDEAAGKMEYMSDVAGV
LSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWW
GSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPT
AVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPS
FKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATM
KKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLR
IPVIPVAPVTTAPPAFSFTEALKKYVEAQKRQPPPPANPSNTSSIPTQTE
KPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR
| Relationships |
|---|
| The polypeptide, XM_017364521.1, derives from mRNA, XM_017364521.1. |

Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
Match: A0A5B7A9C5 ((Uncharacterized protein {ECO:0000313|EMBL:MPA52296.1}))
HSP 1 Score: 507.294 bits (1305), Expect = 1.242e-176
Identity = 266/449 (59.24%), Postives = 324/449 (72.16%), Query Frame = 0
Query: 1 MAFRRSLITRAKLFNQHKFAPSFQFILHQNDT------DDSKTLNPQFSRQNRSF-----TSTGLFNTAFRNPEASYSV---LNGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAP-PAFSFTEALKKYVEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MA+RRS+ TRA L + +F+PSF +I H++D +D K N QNRSF TS+G F F+ S + G +R+MS++ I + A K+ YM+DVA VL+D VEVV+ Q V+EVA+AAADS+F VAALQYLID VH++TG WW SI TT+LIR +PL+INQLK T+KLTLMRP LEEIKQEMQD+GM P +V +GQ+RM +LFKEYGV P TP+KGLLIQGPVF+SFF AI NMVEKVPSFK GGAFWF DLTTPD+FYIFP+L LTFWITVECN QEG+EGNP TMKKV RVFA +TVPITMSFPKAIFCYW+TSNLFSL+YG VIR P VKK L +P+IPVAP T+ P P SF E++K+Y A +R PA S+ +P T+ ++ + SSV SQR+R LE +VKGRKK KKR
Sbjct: 1 MAYRRSISTRATLLARQRFSPSFSYIHHEDDRKHRSVGEDHKINN---FIQNRSFGGSFTTSSG-FGAVFQEQRCSQFFVPPMIGSIFSRHMSTT--IGDEANKIGYMTDVAEVLADKTVEVVASQA-PVVNEVAIAAADSFFNVAALQYLIDGVHSFTGFNWWASIVVTTLLIRGATIPLLINQLKATTKLTLMRPHLEEIKQEMQDKGMDPNSVADGQKRMKELFKEYGVNPLTPMKGLLIQGPVFISFFLAITNMVEKVPSFKSGGAFWFTDLTTPDTFYIFPILAGLTFWITVECNAQEGLEGNPIAGTMKKVSRVFAALTVPITMSFPKAIFCYWVTSNLFSLMYGLVIRRPGVKKFLGVPIIPVAPPTSPPKPGLSFIESVKQYSAAMQRATQQPA--SSPVEVPKLTD-----HRISSSSVNSQRLRRLEKEVKGRKKNKKR 435
Match: A0A5B7A8Q7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA52298.1}))
HSP 1 Score: 507.294 bits (1305), Expect = 1.284e-176
Identity = 266/449 (59.24%), Postives = 324/449 (72.16%), Query Frame = 0
Query: 1 MAFRRSLITRAKLFNQHKFAPSFQFILHQNDT------DDSKTLNPQFSRQNRSF-----TSTGLFNTAFRNPEASYSV---LNGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAP-PAFSFTEALKKYVEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MA+RRS+ TRA L + +F+PSF +I H++D +D K N QNRSF TS+G F F+ S + G +R+MS++ I + A K+ YM+DVA VL+D VEVV+ Q V+EVA+AAADS+F VAALQYLID VH++TG WW SI TT+LIR +PL+INQLK T+KLTLMRP LEEIKQEMQD+GM P +V +GQ+RM +LFKEYGV P TP+KGLLIQGPVF+SFF AI NMVEKVPSFK GGAFWF DLTTPD+FYIFP+L LTFWITVECN QEG+EGNP TMKKV RVFA +TVPITMSFPKAIFCYW+TSNLFSL+YG VIR P VKK L +P+IPVAP T+ P P SF E++K+Y A +R PA S+ +P T+ ++ + SSV SQR+R LE +VKGRKK KKR
Sbjct: 1 MAYRRSISTRATLLARQRFSPSFSYIHHEDDRKQRSVGEDHKINN---FIQNRSFGGSFTTSSG-FGAVFQEQRCSQFFVPPMIGSIFSRHMSTT--IGDEANKIGYMTDVAEVLADKTVEVVASQA-PVVNEVAIAAADSFFNVAALQYLIDGVHSFTGFNWWASIVVTTLLIRGATIPLLINQLKATTKLTLMRPHLEEIKQEMQDKGMDPNSVADGQKRMKELFKEYGVNPLTPMKGLLIQGPVFISFFLAITNMVEKVPSFKSGGAFWFTDLTTPDTFYIFPILAGLTFWITVECNAQEGLEGNPIAGTMKKVSRVFAALTVPITMSFPKAIFCYWVTSNLFSLMYGLVIRRPGVKKFLGVPIIPVAPPTSPPKPGLSFIESVKQYSAAMQRATQQPA--SSPVEVPKLTD-----HRISSSSVNSQRLRRLEKEVKGRKKNKKR 435
Match: A0A5J4ZUZ7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8520947.1}))
HSP 1 Score: 500.745 bits (1288), Expect = 4.485e-174
Identity = 259/447 (57.94%), Postives = 320/447 (71.59%), Query Frame = 0
Query: 1 MAFRRSLITRAKLFNQHKFAPSFQFILHQNDT------DDSKTLNPQFSRQN--RSFTSTGLFNTAFRNPEASYSV---LNGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAP-PAFSFTEALKKY-VEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MA+RRSL TRA L + +F+PSF +I H++D +D K R++ TS+ F + S + G +R+MS++ I + A + YM+DVA VL+D VE V+ Q AV+EVA+AAADS+FPVAALQYLID VH++TG WW SI TT+LIR PL+INQLK TSKLTLMRP L+EI+QEMQD+GM PT+V EGQ+RM +LF EYGVTP+TPLKGL IQGPVFVSFF AI N+VEKVPSFK GGAFWF DLTTPD+ YIFP+LTALTFWITVECN QEG+EGNP TMKKV RVFA++T+P+TM+FPKAIFCYWITSNLFSL+YG VI+ P VKKLL +P+I VAP T+ P PA SF E+LK+Y E QK P ++P +P ++ + SSV +QR+R LE +VKGRKK KKR
Sbjct: 1 MAYRRSLSTRATLLARQRFSPSFSYINHEDDRKHRSVGEDQKFCTNFLQRRSLGGGLTSSSGFGATLQEQRCSQFFVPPMIGSFFSRHMSTT--IGDEASNIGYMTDVAEVLADKTVEAVASQA-PAVNEVAIAAADSFFPVAALQYLIDGVHSFTGFNWWASIVVTTLLIRGATFPLLINQLKATSKLTLMRPHLDEIRQEMQDKGMDPTSVAEGQKRMKELFTEYGVTPFTPLKGLFIQGPVFVSFFLAITNLVEKVPSFKSGGAFWFTDLTTPDTLYIFPILTALTFWITVECNAQEGLEGNPVAGTMKKVSRVFAVLTIPLTMNFPKAIFCYWITSNLFSLMYGLVIKRPGVKKLLGVPIITVAPPTSPPKPALSFFESLKQYSAEIQKATQRPASSPVEGPKLP--------DHRISSSSVYNQRLRKLEKEVKGRKKNKKR 436
Match: A0A2G9GVC0 ((Inner membrane protein translocase involved in respiratory chain assembly {ECO:0000313|EMBL:PIN09208.1}))
HSP 1 Score: 485.337 bits (1248), Expect = 6.386e-168
Identity = 258/454 (56.83%), Postives = 313/454 (68.94%), Query Frame = 0
Query: 1 MAFRRSLITRAKLF--NQHKFAPSFQFILHQNDTDDSKTLNPQFSR--------QNRSFTSTGLFNTA------FRNPEASYSVLNGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVA-PVTTAPPAFSFTEALKKYVEAQKRQ---PPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MAFRRS+ RAKLF Q + APSF I H++D++ + SR Q+R + F+T+ F++ + G RN S+ + AA KME +++ VL VEV Q A +EVAVAAADS+FPVAALQYLIDYVHTYTG WW SI TTILIRW+ +PL+INQLKTTSKLTL+RPKLE I +EM+++ MSP AV+EGQ +M +LFKEYGVTP++P+KG+LI GP+F SFFFAI NM EKVPSFKEGGAFWF DLTTPDS YIFPVLTALTFWITVE N QEG+EGNP T+K V R FA +T+P+T SFPKAIFCYWITSNLFSL YG VI+ P VK+ L +P+IPVA P T P SF E LKKY AQ++Q PP A+P +P + P+ S L+QRIRSLE +VKGRKKGK+R
Sbjct: 1 MAFRRSITARAKLFYQQQQRVAPSFSHI-HRDDSEREEMNGNPVSRNSEIRNYFQHRFVGTGNSFSTSYGSRNWFQDRRFAIPAACGPVCGRNYSTGSVEEGAADKMEILNEAVDVLGGKAVEVAEQVAPLA-NEVAVAAADSFFPVAALQYLIDYVHTYTGFNWWASIMVTTILIRWIQLPLIINQLKTTSKLTLLRPKLEAINEEMRNKDMSPNAVSEGQAQMKKLFKEYGVTPFSPMKGILISGPIFCSFFFAINNMAEKVPSFKEGGAFWFTDLTTPDSMYIFPVLTALTFWITVELNAQEGLEGNPTAGTIKNVSRAFAALTIPLTASFPKAIFCYWITSNLFSLTYGLVIKNPKVKEYLGLPIIPVAPPSTNQKPGLSFFETLKKYAAAQQQQSLLSPPEASP-----------RPTTKTIPSASD-LNQRIRSLEKEVKGRKKGKRR 440
Match: A0A2R6QN12 ((Mitochondrial inner membrane protein {ECO:0000313|EMBL:PSS11313.1}))
HSP 1 Score: 482.641 bits (1241), Expect = 3.278e-167
Identity = 258/446 (57.85%), Postives = 312/446 (69.96%), Query Frame = 0
Query: 1 MAFRRSLITRAKLFNQHKFAPSFQFILHQNDTDDSKTLNPQFSRQNRSFTSTGL-FNTAF---------RNPEASYSVLNGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAP--VTTAPPAFSFTEALKKYVEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MA+RRS+ RA LF + +F+PS +I H+ DD + N ++RS ++ G NT+ R+ + S + G R+MS+ + E A K+EYM+DVA VL+D VE V+ V+EVA+AAADS FPVAALQ+LID VH+ TG WW SI TT+LIR VPL+INQLK+T+KL+L+RP LEEIKQEMQD+GM P AV EGQQRM LFKEYGVTP+TPLKGLL QGPVF+SFF AI NMVEKVPSFK GG +WF DLTTPDS YIFPVLTAL+F ITVECNMQEGMEGNPA TMK + RVFA +TVP+TMSFPKA+FCYW+TSNLFSL YG V++AP VKK L +P I VAP T+ P+ F E LKK+ A +S P + KPA + SSV+SQR+RSLE QVKGRKK KKR
Sbjct: 1 MAYRRSISARAILFARQRFSPSLSYI-HR---DDGRKQN-----EDRSISTFGSEINTSSGFGSSSYGQRSSQFFASSMTGSFFGRHMST--MVGEGAEKIEYMTDVAEVLADRTVEAVAS-AAPVVNEVAIAAADSAFPVAALQHLIDGVHSLTGFNWWASIVVTTLLIRGATVPLLINQLKSTTKLSLLRPHLEEIKQEMQDKGMDPKAVAEGQQRMQALFKEYGVTPFTPLKGLLFQGPVFISFFLAISNMVEKVPSFKCGGVYWFTDLTTPDSLYIFPVLTALSFLITVECNMQEGMEGNPAAKTMKNISRVFAAVTVPVTMSFPKALFCYWVTSNLFSLTYGLVLKAPGVKKFLGVPEITVAPPASTSEKPSLPFLETLKKFAAA-----------QQAASSPVEPPKPAADQRIPSSSVISQRLRSLEKQVKGRKKNKKR 423
Match: A0A830BQC5 ((Mitochondrial inner membrane protein oxa1 {ECO:0000313|EMBL:GFP86724.1}))
HSP 1 Score: 485.337 bits (1248), Expect = 6.935e-167
Identity = 261/453 (57.62%), Postives = 321/453 (70.86%), Query Frame = 0
Query: 1 MAFRRSLITRAKLF--NQHKFAPSFQFILHQNDTD--DSK----TLNPQFSR--QNRSFTSTGLFNTAFRNPEASYSVLN-------GLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAP---VTTAPPAFSFTEALKKYVEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKK 433
MA+RRS+ RAKLF Q++ APSF H++D+D DS+ + +P+ S QNR F + F +AF+ P ++ GL L RN SS + AA K+E ++D+ GVL + VE ++EVA+AAADSYFPVAALQYLI+Y+H YTGL WW SIA TT+LIR L PL++NQLK+T+K TL+RPKLE IK+EM ++ MSP AV +GQ RM +LF EYGVTP+TPLKGLLI P+F SFFFA+ NM EKVPSFKEGG FWF DLTTPD+ YIFPVLTALTFWITVECN QEG+EGNP T+K V RVFA +T+P+T SFPKAIFCYWITSNLFSL YG VI+ P VKK+L IP+I V P T PAFSF E+LKKY AQ+ Q ++ S++SS + KP NQ SS LSQRI+SLE +VKGRKKGK+
Sbjct: 1 MAYRRSITARAKLFYQQQNRVAPSFSHT-HRDDSDREDSRVNPISRSPETSNYFQNRFFGNRSSF-SAFQGPRNAFGDRRFAVPSGCGLVLGRNFSSGSVGEGAADKIEVLNDMVGVLGEKTVE-----AAPVMNEVAIAAADSYFPVAALQYLIEYIHIYTGLDWWASIALTTLLIRSLQFPLLVNQLKSTTKFTLLRPKLEAIKEEMNEQDMSPAAVADGQARMKKLFNEYGVTPFTPLKGLLISAPIFASFFFAVNNMAEKVPSFKEGGIFWFTDLTTPDTMYIFPVLTALTFWITVECNAQEGLEGNPTAGTIKMVSRVFAALTIPLTASFPKAIFCYWITSNLFSLGYGLVIKKPEVKKMLGIPIITVPPPSSSTNKKPAFSFFESLKKYAAAQQYQSLSSSSSSSSSSSVEASSKPTNQRIAPPSSALSQRIKSLEKEVKGRKKGKR 446
Match: A0A6P6TYR4 ((mitochondrial inner membrane protein OXA1-like {ECO:0000313|RefSeq:XP_027082972.1}))
HSP 1 Score: 481.485 bits (1238), Expect = 4.139e-166
Identity = 273/461 (59.22%), Postives = 322/461 (69.85%), Query Frame = 0
Query: 1 MAFRRSLITRAK-LFNQHKFAPSFQFILH-QNDTDDSKT---------LNPQFSRQNRSFTSTGLFNTAFRNPEA-------SYS-------VLN-GLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAP--PAFSFTEALKKYVEAQKRQ--------PPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQV 425
MAFRRS+ RAK L+ + ++APS I H QND DD+K +P F + S T FN + NP+ S+S +N GLN +RNMS+S + AA K++Y++DVA VL+D VE V Q V+EVAVAAADS+ PVAALQYLIDYVHT+TG WW SI TTILIRW+ VPLMINQLK TSK TL+RP+LEEIK+EM+ RGMSPTAV+EGQQRM QLF EYGVTP+TP+KGLL QGP+F+SFF AI NMVEKVPSFKEGGAFWFVDLTTPDS YIFPVLTALTFWITVECNMQEGMEGNPA T+K V R FA +T+P T F K IFCYWITSN+FSL+YG VI+ P VKK L IP+IPV P + PAFSF EA+KKY AQ P S T S + KPA+Q + SS++SQR+RSLE +V
Sbjct: 1 MAFRRSITARAKNLYREQRYAPSLSHINHRQNDDDDTKPNSAPISEIPKSPSFLTRRFSITQFANFNGS--NPKGLLQDRRYSFSSGGQFMGAMNYGLNFSRNMSTSIG-EAAAEKIDYITDVADVLTDHTVEAVVTQAAPVVNEVAVAAADSFLPVAALQYLIDYVHTFTGFNWWASIVVTTILIRWVTVPLMINQLKATSKFTLLRPRLEEIKEEMESRGMSPTAVSEGQQRMKQLFNEYGVTPFTPMKGLLFQGPIFISFFLAITNMVEKVPSFKEGGAFWFVDLTTPDSMYIFPVLTALTFWITVECNMQEGMEGNPAAGTIKNVSRGFAALTIPFTAGFAKGIFCYWITSNIFSLMYGLVIKNPAVKKALGIPIIPVTPPSPGEQKPAFSFFEAVKKYAAAQAAAQHKQTLSAPADAVQQSQTPSSRAEASKPASQQRVPSSSIISQRLRSLEKEV 458
Match: A0A6P6TNS9 ((mitochondrial inner membrane protein OXA1-like {ECO:0000313|RefSeq:XP_027079677.1}))
HSP 1 Score: 481.485 bits (1238), Expect = 5.148e-166
Identity = 272/461 (59.00%), Postives = 321/461 (69.63%), Query Frame = 0
Query: 1 MAFRRSLITRAK-LFNQHKFAPSFQFILH-QNDTDDSKT---------LNPQFSRQNRSFTSTGLFNTAFRNPEA-------SYS-------VLN-GLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAP--PAFSFTEALKKYVEAQKRQ--------PPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQV 425
MAFRRS+ RAK L+ + ++APS I H QND DDSK +P F + S T FN + NP+ S+S +N GLN +RNMS+S + AA K++Y++DVA VL+D VE V Q V+EVAVAAADS+ PVA LQYLIDYVH +TG WW SI TTILIRW+ VPLMINQLK TSK TL+RP+LEEIK+EM+ RGMSPTAV+EGQQRM QLF EYGVTP+TP++GLL QGP+F+SFF AI NMVEKVPSFKEGGAFWFVDLTTPDS YIFPVLTALTFWITVECNMQEGMEGNPA T+K V R FA +T+P T F K IFCYWITSN+FSL+YG VI+ P VKK L IP+IPV P + PAFSF EA+KKY AQ P S T S P + KPA+Q + SS++SQR+RSLE +V
Sbjct: 1 MAFRRSITARAKNLYQEQRYAPSLSHINHRQNDDDDSKPNSTPISEIPKSPSFLTRRFSITQFANFNGS--NPKGLLQDRRYSFSSGGQFMGAMNYGLNFSRNMSTSIG-EAAAEKIDYITDVADVLTDHTVEAVVTQAAPVVNEVAVAAADSFLPVAVLQYLIDYVHMFTGFNWWASIVVTTILIRWVTVPLMINQLKATSKFTLLRPRLEEIKEEMESRGMSPTAVSEGQQRMKQLFNEYGVTPFTPMRGLLFQGPIFISFFLAITNMVEKVPSFKEGGAFWFVDLTTPDSMYIFPVLTALTFWITVECNMQEGMEGNPAAGTIKNVSRGFAALTIPFTAGFAKGIFCYWITSNIFSLMYGLVIKNPAVKKALGIPIIPVTPPSPGEQKPAFSFFEAVKKYAAAQAAAQHKQTLSAPADAVQQSQTPSSPAEASKPASQQRVPSSSIISQRLRSLEKEV 458
Match: A0A5N6QVG2 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8010009.1}))
HSP 1 Score: 479.945 bits (1234), Expect = 5.853e-166
Identity = 259/449 (57.68%), Postives = 313/449 (69.71%), Query Frame = 0
Query: 1 MAFRRSLITRAKLFNQHKFAPSFQFILHQNDTDDSKTLNPQFSR------QNRSFTSTGL-----FNTAFRNPEASYSVL---NGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAP-PAFSFTEALKKYVEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MA+ RSL TRA L + + PSF ++LH +D S T S+ Q RSF S+ L F F + S+ L G + +R MS++ + E + K+E +SDVAGVL+D V+ V+ Q VAAV+EVA+AAADSY PV ALQY ID VH++TGL WW SIA T+LIR PL+INQLK T+KLTLMRP+LEE+KQ+MQD+GM P AV EGQ++M LFKEYGV+P+TPLKGL IQGPVFVSFF AI NM EKVPSFK GGAFWFVDLTTPD+ YI PVLTAL+F ITVECNMQEGMEGNP +TMK V R A++TVP TM FPKAIFCYWITSNLFSL+YG V++ VKK L +P IPVA T+AP PAFS ALK ++ P + PS + +P + P SS +SQR+RSLE QVKGRKK KKR
Sbjct: 1 MAYMRSLSTRATLIAR-RCHPSFGYVLHDDDRKHSSTDEDLSSQRVDNFLQRRSFGSSNLNKSAGFGALFPDRGCSHIFLPPSTGPSFSRYMSTT--VGEGSDKIEMISDVAGVLTDTTVQAVASQ-VAAVNEVAIAAADSYLPVKALQYFIDGVHSFTGLNWWASIALATLLIRGATAPLLINQLKATTKLTLMRPRLEELKQQMQDKGMDPAAVAEGQRKMQNLFKEYGVSPFTPLKGLFIQGPVFVSFFLAISNMAEKVPSFKSGGAFWFVDLTTPDTLYILPVLTALSFLITVECNMQEGMEGNPVASTMKNVSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLIYGLVLKCRGVKKFLGVPEIPVAQPTSAPQPAFSAFSALKLPTMVKQE---PTSVPSESVKLPDRRISP--------SSNISQRLRSLEKQVKGRKKNKKR 434
Match: A0A2G2XKJ0 ((Uncharacterized protein {ECO:0000313|EMBL:PHT57871.1}))
HSP 1 Score: 478.404 bits (1230), Expect = 5.890e-165
Identity = 258/472 (54.66%), Postives = 313/472 (66.31%), Query Frame = 0
Query: 1 MAFRRSLITRAKL-FNQHKFAPSFQFILHQNDTDDSKTLNPQFSR----------------------------QNRSFTSTGLFNTAFRNPEASYSVLNGLNLARNMSSSRAIDEAAGKMEYMSDVAGVLSDGGVEVVSQQGVAAVSEVAVAAADSYFPVAALQYLIDYVHTYTGLPWWGSIAATTILIRWLAVPLMINQLKTTSKLTLMRPKLEEIKQEMQDRGMSPTAVTEGQQRMSQLFKEYGVTPWTPLKGLLIQGPVFVSFFFAIQNMVEKVPSFKEGGAFWFVDLTTPDSFYIFPVLTALTFWITVECNMQEGMEGNPAGATMKKVMRVFALITVPITMSFPKAIFCYWITSNLFSLLYGSVIRAPTVKKLLRIPVIPVAPVTTAPPAFSFTEALKKY---------VEAQKRQPPPPANPSNTSSIPTQTEKPANQNKPAVSSVLSQRIRSLENQVKGRKKGKKR 434
MA+RRS+ TRAKL + Q + P+F + H++D DD K P F Q+R F ++G F SY G L RNMS+ I A K++YM+DVA VL+D VE V Q AV+EVA+AAAD Y PV AL YL+DYVH +TG WWGSI AT+I+IR +P MINQLK TSKLTL+RPKLEEIK EMQ++GM+P AV +GQ+RM +L +EYGVTP+TPLKGLLIQGP+FVSFF AI++MV+ VPS K GGAFWF DLTTPD+ YIFP+LTALTFWITVE N QEG+EGNPA T+K V R FA +TVP+T +FPKAIFCYWITSNLFSL YG VI++P VKK L +P+IPV+P T PA F E LKKY + +Q + SS P + + +Q PA SSVLSQRIRSLE +VKGRKK KKR
Sbjct: 1 MAYRRSITTRAKLLYQQQRATPAFSY-FHKDD-DDRKNPEPSFENSRIPSFSQPRYMGSASGANSFICSRSPYQDRRFCASGPFI------PMSY----GSFLTRNMSTD--IGGGADKIDYMTDVAEVLADKAVEAVVSQA-PAVNEVAIAAADCYLPVKALMYLMDYVHIFTGFEWWGSIVATSIMIRLFTLPFMINQLKATSKLTLLRPKLEEIKDEMQNKGMAPAAVADGQKRMQELMREYGVTPFTPLKGLLIQGPIFVSFFMAIRSMVDNVPSLKTGGAFWFTDLTTPDAMYIFPILTALTFWITVELNAQEGLEGNPAAKTIKNVSRGFAALTVPLTATFPKAIFCYWITSNLFSLSYGLVIKSPAVKKALGVPIIPVSPPTEQKPALPFFETLKKYAAAQQHIAAQQHAAKQNAEASQQPAVSSPPVEESRSTSQRIPA-SSVLSQRIRSLEKEVKGRKKNKKR 456
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7A9C5 | E-Value: 1.242e-176, PID: 59.24 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5229... [more] |
| A0A5B7A8Q7 | E-Value: 1.284e-176, PID: 59.24 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5229... [more] |
| A0A5J4ZUZ7 | E-Value: 4.485e-174, PID: 57.94 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8520... [more] |
| A0A2G9GVC0 | E-Value: 6.386e-168, PID: 56.83 | (Inner membrane protein translocase involved in re... [more] |
| A0A2R6QN12 | E-Value: 3.278e-167, PID: 57.85 | (Mitochondrial inner membrane protein {ECO:0000313... [more] |
| A0A830BQC5 | E-Value: 6.935e-167, PID: 57.62 | (Mitochondrial inner membrane protein oxa1 {ECO:00... [more] |
| A0A6P6TYR4 | E-Value: 4.139e-166, PID: 59.22 | (mitochondrial inner membrane protein OXA1-like {E... [more] |
| A0A6P6TNS9 | E-Value: 5.148e-166, PID: 59.00 | (mitochondrial inner membrane protein OXA1-like {E... [more] |
| A0A5N6QVG2 | E-Value: 5.853e-166, PID: 57.68 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8010... [more] |
| A0A2G2XKJ0 | E-Value: 5.890e-165, PID: 54.66 | (Uncharacterized protein {ECO:0000313|EMBL:PHT5787... [more] |
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |
