Resource Type:
Polypeptide
Name:
XM_017367186.1
Identifier:
XM_017367186.1-protein
Sequence:
MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPES
PEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEA
VTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLE
DPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKD
RDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFK
KAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLR
KSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSST
LEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDL
TTESDQQIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAKELEKGK
EKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVN
SKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEE
EFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFT
HHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHST
LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLR
KLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDE
VLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILV
FGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHF
QRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHER
KNLSEKNNTEKHLDTEKVSSGQLGRSSVNGQMLSDGVKANGEAHEEATED
TDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEV
RVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNI
FEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMF
IPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSW
IQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGIFYSRRR
Sequence Length:
1193
Sequence Checksum:
085965649cb77dff41475de1d5c0de8d
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367186.1, derives from mRNA, XM_017367186.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z5R2 ((Putative regulator of nonsense transcripts UPF2 isoform X2 {ECO:0000313|EMBL:MPA39425.1}))
HSP 1 Score: 1988.77 bits (5151), Expect = 0.000e+0
Identity = 990/1196 (82.78%), Postives = 1080/1196 (90.30%), Query Frame = 0
Match: A0A5B6Z5R2 ((Putative regulator of nonsense transcripts UPF2 isoform X2 {ECO:0000313|EMBL:MPA39425.1}))
HSP 1 Score: 1988.77 bits (5151), Expect = 0.000e+0
Identity = 990/1196 (82.78%), Postives = 1080/1196 (90.30%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQ-QIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAK-ELEKGKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSS-GQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGIFYSRRR 1193
MEHPE+E R GGE GK DDEEA ARLEEFKKSVE K LRQSNLNPE P+ FLR LDSSIKRNTAVIKKLKQINEEQRE LMDELRSVNLSKFVSEAVTAIC+AKLRTSDIQAA+QICSLLHQRY+DF+PSL+QGLLKIFFPGK+ +D D DKNSRAMKKRS+LKLL ELYFVGV++D +F+NIIKDLTS+E LKDRDA Q+NLSLL+SFARQ R+FLGLP GQEI EEF+KGLNIT +QKKFFKKAFH YYDAAAELLQSEH SLRQMEHEN+KILNAKGELS+E A++YEKLRKSYD+LYRG+SALAEALDM+PPVMPED HTTRVTTGEDAS PG GKDSS LEA+WDDEDTRAFYECLPDLRAFVPAVLLGE+E KVN+QS KT EQ +D + ESDQ Q+ TQD AEVS S Q+ KNEKGK+KD+ + ++ + EKGKEK+ADRKG+ EKEKLK EGT+LD LLQRLPGCVSRDLIDQLTVEFCY+NSKS+RKKLVRALF+VPRTSLELLPYYSRMV TLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRFIGELCKFKIAPAGL+FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET VR ANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS+CEPYLLKCFMKVH+GKYGQIHLIASLTAGLSRYHDEFAV+VVDEVLEEIR+GLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYL+LVFGHGT E+D+LDPPEDCFR RMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKG +PLDIEFDLQDLFADLRPNMTRYSS+EE++AAL LEEHER ++K N+EKH DTEK S G SVNGQ L +G++ NG AHEE D+D+DSGS T P H DEEELDE NHD+ DS++DY DGG ASD DDE+ VRQK+T+VDP EEADFDRE RALMQESL+SRKLELRARPTLNMMIPMN+FEGPTKDHHGRG EGESGD+TLDEEAGGSKEV+VKVLVKRG+KQQTK+M+IPRD +LVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLG QP W+QSG R ++RGH W+GHGGRGAGSRHRY H+S GG++YSRR+
Sbjct: 1 MEHPEDECRDGGEH-HGKQDDEEAIARLEEFKKSVEAKKALRQSNLNPERPDSGFLRALDSSIKRNTAVIKKLKQINEEQREGLMDELRSVNLSKFVSEAVTAICDAKLRTSDIQAAIQICSLLHQRYRDFAPSLIQGLLKIFFPGKSGDDLDIDKNSRAMKKRSTLKLLSELYFVGVIEDSGIFINIIKDLTSVEQLKDRDATQSNLSLLASFARQGRYFLGLPHYGQEIFEEFFKGLNITADQKKFFKKAFHTYYDAAAELLQSEHNSLRQMEHENAKILNAKGELSDENASSYEKLRKSYDNLYRGISALAEALDMKPPVMPEDGHTTRVTTGEDASCPGAGKDSSVLEAMWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSTKTQEQPTDTSPESDQGQMATQDTAEVSADSGALQEGKNEKGKDKDEKDKEKTKDPDKEKGKEKDADRKGENEKEKLKGLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVGTLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLIFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRTANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCEPYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLVLVFGHGTTEQDMLDPPEDCFRSRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGVLPLDIEFDLQDLFADLRPNMTRYSSIEEVNAALIELEEHERTVSTDKANSEKHSDTEKPPSRSTSGSISVNGQSLVNGIEENGGAHEEGIGDSDSDSGSGTFDPERHDDEEELDEVNHDDGCDSDDDYDDGGGPASD-DDEIHVRQKVTEVDPQEEADFDRELRALMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHHGRGAEGESGDETLDEEAGGSKEVQVKVLVKRGNKQQTKQMYIPRDCSLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGTQPMGWMQSGASRLANRGHTWEGHGGRGAGSRHRYQHYSSGGLYYSRRK 1194
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6UFN1 ((regulator of nonsense transcripts UPF2-like {ECO:0000313|RefSeq:XP_027089031.1, ECO:0000313|RefSeq:XP_027089032.1}))
HSP 1 Score: 1958.73 bits (5073), Expect = 0.000e+0
Identity = 951/1198 (79.38%), Postives = 1068/1198 (89.15%), Query Frame = 0
Match: A0A6P6UFN1 ((regulator of nonsense transcripts UPF2-like {ECO:0000313|RefSeq:XP_027089031.1, ECO:0000313|RefSeq:XP_027089032.1}))
HSP 1 Score: 1958.73 bits (5073), Expect = 0.000e+0
Identity = 951/1198 (79.38%), Postives = 1068/1198 (89.15%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQQIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAKELEK--GKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSS-GQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYH--HHSGGGIFYSRRR 1193
MEHPE+E RSGGE + K DDEE+ AR EEFKKSVE KM LRQSN+NPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LM++LRSVNLSKFVSEAV AIC+AKLR++DIQAAVQICSLLHQRYKDFSPSLVQGL+K FFPGK+ EDP+AD+N +AMKKRS+LKLLLELYFVGV+DD +FVNIIKDLTS+EHLKDRDA QTNLSLL+SFARQ R+ LGLP +GQ++LEEF+K LN+ EQK+FF+KAF YYDAA ELLQSEH SLRQMEHEN+KI+NAKGELS+E A++YEKLRKSYD+LYRG+SALAE+LDMQPPVMPED HTTR+++GED SS GKDS LEA+WDDEDT+AFYECLPDLRAFVPAVLLGE+E K+N+QS KT +QS+DL E+DQ +T+++A+VS+ S SQ+ K EK K+KD+ DKEK+KE+EK GKEK+A+RKG+++KEK+K EGT+LD LLQRLPGCVSRDLIDQLTVEFCY+NSKS+RKKLVRALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET +RMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE VLRQLRKLPWSEC+PYLLKCFMKVH+GK+GQIHLIASLTAGLSRYHD+FAV+VVDEVLEEIR+GLELNDYGMQQRRIA MRFLGELYNYE VDSSVIFDTLYLILVFGHGTAE+D LDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYIL KGA+PLDIEFDLQDLFA+LRPNMTRYSSVEE++AAL LEEHER +EK N +KH +T K S G S+NGQ +++G + NGE H++ +TD+DSGS T GH+DEE+ DE NHDE +++EDY D ASDE+DEV VRQ +VDP E A+FDRE RA+MQESL+SRKLELRARPTLNMMIPMN+FEGPTKDH G+ EGESGD+ +DE AGG+KEV+VKVLVKRG+KQQTK+M IPRD TLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLG QP SW QS G R +RGHAW+GH GR GSR R+H HHSGGG+ YSRRR
Sbjct: 1 MEHPEDEPRSGGEHHE-KHDDEESVARSEEFKKSVEAKMALRQSNMNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMEDLRSVNLSKFVSEAVAAICDAKLRSADIQAAVQICSLLHQRYKDFSPSLVQGLMKTFFPGKSGEDPEADRNLKAMKKRSTLKLLLELYFVGVIDDSGIFVNIIKDLTSLEHLKDRDATQTNLSLLASFARQGRYLLGLPQTGQDVLEEFFKSLNVMAEQKRFFRKAFQTYYDAAVELLQSEHVSLRQMEHENAKIINAKGELSDENASSYEKLRKSYDNLYRGISALAESLDMQPPVMPEDGHTTRMSSGEDLSSQSAGKDSPVLEALWDDEDTKAFYECLPDLRAFVPAVLLGEAEPKLNEQSPKTQDQSTDLAAEADQCQITRELADVSLDSGSSQEDKGEKVKDKDE-RDKEKSKEIEKDKGKEKDAERKGESDKEKVKGLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTLRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIERVLRQLRKLPWSECDPYLLKCFMKVHKGKFGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRLGLELNDYGMQQRRIADMRFLGELYNYELVDSSVIFDTLYLILVFGHGTAEQDTLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILCKGALPLDIEFDLQDLFAELRPNMTRYSSVEEVNAALVELEEHERVVATEKANIDKHSETGKSPSRTSSGVISLNGQSIANGTEENGELHDDIVGETDSDSGSGTPERMGHHDEEDSDEGNHDEESETDEDYDDLVGPASDEEDEVHVRQIAAQVDPQEAAEFDRELRAIMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHLGKSTEGESGDEAIDEAAGGNKEVQVKVLVKRGNKQQTKQMSIPRDCTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGMQPLSWTQSAGSRVGNRGHAWEGH-GRTTGSRGRHHYIHHSGGGMHYSRRR 1195
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U9Y0 ((regulator of nonsense transcripts UPF2-like isoform X2 {ECO:0000313|RefSeq:XP_027087055.1, ECO:0000313|RefSeq:XP_027087056.1}))
HSP 1 Score: 1954.87 bits (5063), Expect = 0.000e+0
Identity = 951/1198 (79.38%), Postives = 1067/1198 (89.07%), Query Frame = 0
Match: A0A6P6U9Y0 ((regulator of nonsense transcripts UPF2-like isoform X2 {ECO:0000313|RefSeq:XP_027087055.1, ECO:0000313|RefSeq:XP_027087056.1}))
HSP 1 Score: 1954.87 bits (5063), Expect = 0.000e+0
Identity = 951/1198 (79.38%), Postives = 1067/1198 (89.07%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQQIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAKELEK--GKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSS-GQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYH--HHSGGGIFYSRRR 1193
MEHPE+E RSGGE + K DDEEA AR EEFKKSVE KM LRQSN+NPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LM++LRSVNLSKFVSEAV AIC+AKLR++DIQAAVQICSLLHQRYKDFSPSLVQGL+K FFPGK+ EDP+AD+N +AMKKRS+LKLLLELYFVGV+DD +FVNIIKDLTS+EH KDRDA QTNLSLL+SFARQ R+ LGLP +GQ++LEEF+K LN+ EQK+FF+KAF YYDAA ELLQSEH SLRQMEHEN+KI+NAKGELS+E A++YEKLRKSYD+LYRG+SALAE+LDMQPPVMPED HTTR+++GED SS GKDS LEA+WDDEDT+AFYECLPDLRAFVPAVLLGE+E K+N+QS KT +QS+DL E+DQ +T+++A+VS+ S SQ+ K EK K+KD+ DKEK+KE+EK GKEK+A+RKG+++KEK+K EGT+LD LLQRLPGCVSRDLIDQLTVEFCY+NSKS+RKKLVRALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRFIGELCKFKIAP+GLVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET +RMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE VLRQLRKLPWSEC+PYLLKCFMKVH+GK+GQIHLIASLTAGLSRYHD+FAV+VVDEVLEEIR GLELNDYGMQQRRIA+MRFLGELYNYE VDSSVIFDTLYLILVFGHGTAE+D LDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYIL KGA+PLDIEFDLQDLFA+LRPNMTRYSSVEE++AAL LEEHER +EK N +KH +T K S G SVNGQ +++G + NGE H++ +TD+DSGS T GH+DEE+ DE NHDE +++EDY D ASDE+DEV VRQ +VDP E A+FDRE RA+MQESL+SRKLELRARPTLNMMIPMN+FEGPTKDH G+ EGESGD+ +DE AGG+KEV+VKVLVKRG+KQQTK+M IPRD TLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLG QP SW QS G R +RGHAW+GH GR GSR R+H HHSGGG+ YSRRR
Sbjct: 1 MEHPEDEPRSGGEHHE-KHDDEEAVARSEEFKKSVEAKMALRQSNMNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMEDLRSVNLSKFVSEAVAAICDAKLRSADIQAAVQICSLLHQRYKDFSPSLVQGLMKTFFPGKSGEDPEADRNLKAMKKRSTLKLLLELYFVGVIDDSGIFVNIIKDLTSLEHFKDRDATQTNLSLLASFARQGRYLLGLPQTGQDVLEEFFKSLNVMAEQKRFFRKAFQTYYDAAVELLQSEHVSLRQMEHENAKIINAKGELSDENASSYEKLRKSYDNLYRGISALAESLDMQPPVMPEDGHTTRMSSGEDLSSQSAGKDSPVLEALWDDEDTKAFYECLPDLRAFVPAVLLGEAEPKLNEQSPKTQDQSTDLAAEADQCQITRELADVSLDSGSSQEDKGEKVKDKDE-RDKEKSKEIEKDKGKEKDAERKGESDKEKVKGLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPSGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTMRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIERVLRQLRKLPWSECDPYLLKCFMKVHKGKFGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRFGLELNDYGMQQRRIANMRFLGELYNYELVDSSVIFDTLYLILVFGHGTAEQDTLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILCKGALPLDIEFDLQDLFAELRPNMTRYSSVEEVNAALVELEEHERVVATEKANIDKHSETGKSPSRTSSGVISVNGQSIANGSEENGELHDDIVGETDSDSGSGTPERMGHHDEEDSDEGNHDEESETDEDYDDLVGPASDEEDEVHVRQIAAQVDPQEAAEFDRELRAIMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHLGKSTEGESGDEAIDEAAGGNKEVQVKVLVKRGNKQQTKQMSIPRDCTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGMQPLSWTQSAGSRLGNRGHAWEGH-GRTTGSRGRHHYIHHSGGGMHYSRRR 1195
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U923 ((regulator of nonsense transcripts UPF2-like isoform X1 {ECO:0000313|RefSeq:XP_027087053.1, ECO:0000313|RefSeq:XP_027087054.1}))
HSP 1 Score: 1950.64 bits (5052), Expect = 0.000e+0
Identity = 951/1202 (79.12%), Postives = 1067/1202 (88.77%), Query Frame = 0
Match: A0A6P6U923 ((regulator of nonsense transcripts UPF2-like isoform X1 {ECO:0000313|RefSeq:XP_027087053.1, ECO:0000313|RefSeq:XP_027087054.1}))
HSP 1 Score: 1950.64 bits (5052), Expect = 0.000e+0
Identity = 951/1202 (79.12%), Postives = 1067/1202 (88.77%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDE----EAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQQIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAKELEK--GKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSS-GQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYH--HHSGGGIFYSRRR 1193
MEHPE+E RSGGE + K DDE EA AR EEFKKSVE KM LRQSN+NPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LM++LRSVNLSKFVSEAV AIC+AKLR++DIQAAVQICSLLHQRYKDFSPSLVQGL+K FFPGK+ EDP+AD+N +AMKKRS+LKLLLELYFVGV+DD +FVNIIKDLTS+EH KDRDA QTNLSLL+SFARQ R+ LGLP +GQ++LEEF+K LN+ EQK+FF+KAF YYDAA ELLQSEH SLRQMEHEN+KI+NAKGELS+E A++YEKLRKSYD+LYRG+SALAE+LDMQPPVMPED HTTR+++GED SS GKDS LEA+WDDEDT+AFYECLPDLRAFVPAVLLGE+E K+N+QS KT +QS+DL E+DQ +T+++A+VS+ S SQ+ K EK K+KD+ DKEK+KE+EK GKEK+A+RKG+++KEK+K EGT+LD LLQRLPGCVSRDLIDQLTVEFCY+NSKS+RKKLVRALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRFIGELCKFKIAP+GLVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET +RMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE VLRQLRKLPWSEC+PYLLKCFMKVH+GK+GQIHLIASLTAGLSRYHD+FAV+VVDEVLEEIR GLELNDYGMQQRRIA+MRFLGELYNYE VDSSVIFDTLYLILVFGHGTAE+D LDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYIL KGA+PLDIEFDLQDLFA+LRPNMTRYSSVEE++AAL LEEHER +EK N +KH +T K S G SVNGQ +++G + NGE H++ +TD+DSGS T GH+DEE+ DE NHDE +++EDY D ASDE+DEV VRQ +VDP E A+FDRE RA+MQESL+SRKLELRARPTLNMMIPMN+FEGPTKDH G+ EGESGD+ +DE AGG+KEV+VKVLVKRG+KQQTK+M IPRD TLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLG QP SW QS G R +RGHAW+GH GR GSR R+H HHSGGG+ YSRRR
Sbjct: 1 MEHPEDEPRSGGEHHE-KHDDEHLVQEAVARSEEFKKSVEAKMALRQSNMNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMEDLRSVNLSKFVSEAVAAICDAKLRSADIQAAVQICSLLHQRYKDFSPSLVQGLMKTFFPGKSGEDPEADRNLKAMKKRSTLKLLLELYFVGVIDDSGIFVNIIKDLTSLEHFKDRDATQTNLSLLASFARQGRYLLGLPQTGQDVLEEFFKSLNVMAEQKRFFRKAFQTYYDAAVELLQSEHVSLRQMEHENAKIINAKGELSDENASSYEKLRKSYDNLYRGISALAESLDMQPPVMPEDGHTTRMSSGEDLSSQSAGKDSPVLEALWDDEDTKAFYECLPDLRAFVPAVLLGEAEPKLNEQSPKTQDQSTDLAAEADQCQITRELADVSLDSGSSQEDKGEKVKDKDE-RDKEKSKEIEKDKGKEKDAERKGESDKEKVKGLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPSGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTMRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIERVLRQLRKLPWSECDPYLLKCFMKVHKGKFGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRFGLELNDYGMQQRRIANMRFLGELYNYELVDSSVIFDTLYLILVFGHGTAEQDTLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILCKGALPLDIEFDLQDLFAELRPNMTRYSSVEEVNAALVELEEHERVVATEKANIDKHSETGKSPSRTSSGVISVNGQSIANGSEENGELHDDIVGETDSDSGSGTPERMGHHDEEDSDEGNHDEESETDEDYDDLVGPASDEEDEVHVRQIAAQVDPQEAAEFDRELRAIMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHLGKSTEGESGDEAIDEAAGGNKEVQVKVLVKRGNKQQTKQMSIPRDCTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGMQPLSWTQSAGSRLGNRGHAWEGH-GRTTGSRGRHHYIHHSGGGMHYSRRR 1199
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068U821 ((Uncharacterized protein {ECO:0000313|EMBL:CDP04324.1}))
HSP 1 Score: 1921.36 bits (4976), Expect = 0.000e+0
Identity = 942/1201 (78.43%), Postives = 1057/1201 (88.01%), Query Frame = 0
Match: A0A068U821 ((Uncharacterized protein {ECO:0000313|EMBL:CDP04324.1}))
HSP 1 Score: 1921.36 bits (4976), Expect = 0.000e+0
Identity = 942/1201 (78.43%), Postives = 1057/1201 (88.01%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQQIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAKELEK--GKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSS-GQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRAL---MQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYH--HHSGGGIFYSRRR 1193
MEHPE+E RSGGE + K DDEEA AR EEFKKSVE KM LRQSN+NPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LM++LRSVNLSKFVSEAV AIC+AKLR++DIQAAVQ RYKDFSPSLVQGL+K FFPGK+ EDP+AD+N +AMKKRS+LKLLLELYFVGV+DD +FVNIIKDLTS+EHLKDRDA QTNLSLL+SFARQ R+ LGLP +GQ++LEEF+K LN+ EQK+FF+KAF YYDAA ELLQSEH SLRQMEHEN+KI+NAKGELS+E A++YEKLRKSYD+LYRG+SALAE+LDMQPPVMPED HTTR+++GED SS GKDS EA+WDDEDT+AFYECLPDLRAFVPAVLLGE+E K+N+QS KT +QS+DL E+DQ +T+++A+VS+ S SQ+ K EK K+KD+ DKEK+KE+EK GKEK+A+RKG+++KEK+K EGT+LD LLQRLPGCVSRDLIDQLTVEFCY+NSKS+RKKLVRALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRFIGELCKFKIAP+GLVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET +RMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE VLRQLRKLPWSEC+PYLLKCFMKVH+GK+GQIHLIASLTAGLSRYHD+FAV+VVDEVLEEIR GLELNDYGMQQRRIA+MRFLGELYNYE VDSSVIFDTLYLILVFGHGTAE+D LDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYIL KGA+PLDIEFDLQDLFA+LRPNMTRYSSVEE++AAL LEEHER +EK N +KH +T K S G SVNGQ +++G + NGE H++ +TD+DSGS T GH+DEE+ DE NHDE +++EDY D ASDE+DEV VRQ +VDP E A+FDRE MQESL+SRKLELRARPTLNMMIPMN+FEGPTKDH G+ EGESGD+ +DE AGG+KEV+VKVLVKRG+KQQTK+M IPRD TLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLG QP SW QS G R +RGHAW+GH GR GSR R+H HHSGGG+ YSRRR
Sbjct: 1 MEHPEDEPRSGGEHHE-KHDDEEAVARSEEFKKSVEAKMALRQSNMNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMEDLRSVNLSKFVSEAVAAICDAKLRSADIQAAVQ-------RYKDFSPSLVQGLMKTFFPGKSGEDPEADRNLKAMKKRSTLKLLLELYFVGVIDDSGIFVNIIKDLTSLEHLKDRDATQTNLSLLASFARQGRYLLGLPQTGQDVLEEFFKSLNVMAEQKRFFRKAFQTYYDAAVELLQSEHVSLRQMEHENAKIINAKGELSDENASSYEKLRKSYDNLYRGISALAESLDMQPPVMPEDGHTTRMSSGEDLSSQSAGKDSPVFEALWDDEDTKAFYECLPDLRAFVPAVLLGEAEPKLNEQSPKTQDQSTDLAAEADQCQITRELADVSLDSGSSQEDKGEKVKDKDE-RDKEKSKEIEKDKGKEKDAERKGESDKEKVKGLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPSGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTMRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIERVLRQLRKLPWSECDPYLLKCFMKVHKGKFGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRFGLELNDYGMQQRRIANMRFLGELYNYELVDSSVIFDTLYLILVFGHGTAEQDTLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILCKGALPLDIEFDLQDLFAELRPNMTRYSSVEEVNAALVELEEHERVVATEKANIDKHSETGKSPSRTSSGVISVNGQSIANGSEENGELHDDIVGETDSDSGSGTPERMGHHDEEDSDEGNHDEESETDEDYDDLVGPASDEEDEVHVRQIAAQVDPQEAAEFDRELHNTCYRMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHLGKSTEGESGDEAIDEAAGGNKEVQVKVLVKRGNKQQTKQMSIPRDCTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGMQPLSWTQSAGSRLGNRGHAWEGH-GRTTGSRGRHHYIHHSGGGMHYSRRR 1191
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HNK8 ((Uncharacterized protein {ECO:0000313|EMBL:CCB56227.1}))
HSP 1 Score: 1905.18 bits (4934), Expect = 0.000e+0
Identity = 966/1211 (79.77%), Postives = 1068/1211 (88.19%), Query Frame = 0
Match: F6HNK8 ((Uncharacterized protein {ECO:0000313|EMBL:CCB56227.1}))
HSP 1 Score: 1905.18 bits (4934), Expect = 0.000e+0
Identity = 966/1211 (79.77%), Postives = 1068/1211 (88.19%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQ-QIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAK-------ELEKGKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEK-VSSGQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQ--------ESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYH-HHSGGGIFYSRRR 1193
M+H E++ R GG+ GK D EEA ARLEEFKKS+E KM LR++NLNPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LMD+LR VNLSKFVSEAVTAIC+AKL+TSDIQAAVQICSLLHQRYKDFSPSL+QGLLK+FFPGK+ ++ D D+N +AMKKRS+LKLLLELYFVGVV+D +F+NIIKDLTS+EHLKDRD QTNLSLL+SFARQ R FLG PLSGQEI EEF+KGLNIT + KK F+KAFH YYDAAAELLQ+EHTSLRQMEHEN+KILNAKGELS+E ++YEKLRKSYDHLYRGVS+LAEALDMQPPVMPED HTTRVT+GED SSP K+SS LEA+WDDEDTRAFYECLPDLRAFVPAVLLGE+E KVN+QSAKT EQ +DL E+DQ Q V QD AE+S+ S C +G+ + DKE+ + + EKGKE++ADRKG+ EKEKLK EGTNLDGLLQRLPGCVSRDLIDQLTV+FCY+NSKS+RK+LVRALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRF+GELCKF+IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET VRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLT+GLSRYHD+FAVSVVDEVLEEIR+GLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLIL FGH TAE+DVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGA+PLDIEFDLQDLFADLRPNMTRY S+EE+ AAL LEEHER ++K N+EK+ DTEK S SS NGQ ++GV+ NG AHE+ ++D+DSGS TI P GH +EEELDEENHD+ DSE+D DGG ASDEDDEV VRQK+ +VDP EEADFDRE +AL+Q ESL+SRKLELRARPTLNMMIPMN+FEG TKDHHGRGVEGESGD+ LDEEAGGSKEVRVKVLVKRG+KQQTK+MFIPRD +LVQSTKQKEAAELEEKQDIKRL+LEYNDREEEELNG+G Q SW SGG R SRG +W+ GGR +G+RHR+H ++SGGG +Y RR+
Sbjct: 32 MDHHEDDCRVGGDH-HGKQDGEEAVARLEEFKKSMEAKMALRRTNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLKTSDIQAAVQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLELYFVGVVEDSGIFINIIKDLTSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSGQEIHEEFFKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSSYEKLRKSYDHLYRGVSSLAEALDMQPPVMPEDGHTTRVTSGEDVSSPA-AKESSALEAVWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSAKTQEQPTDLAPEADQSQSVNQDAAEISVDS-----CSPREGRSNEKGKDKEEKEKEKSKDPDKEKGKERDADRKGENEKEKLKGLEGTNLDGLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFLGELCKFRIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAEQDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFADLRPNMTRYLSIEEVSAALIELEEHERTYTTDKANSEKYSDTEKPSSRTTSNTSSANGQSPANGVEENGGAHEDVIGESDSDSGSGTIDPEGHDEEEELDEENHDDGCDSEDDEDDGGGPASDEDDEVHVRQKVAEVDPQEEADFDRELKALLQARFSLMLSESLDSRKLELRARPTLNMMIPMNVFEGSTKDHHGRGVEGESGDEILDEEAGGSKEVRVKVLVKRGNKQQTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQTMSWTPSGGSRV-SRGSSWE--GGRTSGARHRHHQNYSGGGFYYGRRK 1232
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PL20 ((Regulator of nonsense transcripts like {ECO:0000313|EMBL:PSR93041.1}))
HSP 1 Score: 1901.33 bits (4924), Expect = 0.000e+0
Identity = 963/1196 (80.52%), Postives = 1054/1196 (88.13%), Query Frame = 0
Match: A0A2R6PL20 ((Regulator of nonsense transcripts like {ECO:0000313|EMBL:PSR93041.1}))
HSP 1 Score: 1901.33 bits (4924), Expect = 0.000e+0
Identity = 963/1196 (80.52%), Postives = 1054/1196 (88.13%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQ-QIVTQDIAEVSIGSEVSQD-CKNEKGKEKDDSNDKEKAKELEKGKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKV-SSGQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGIFYSRRR 1193
MEH E E R GGE GK DDEEA AR EEFKKSVE KM LRQSNLNPE P+ SFLRTLDSSIKRNTAVIKKLKQINEEQRESL+DELR VNLSKFVSEAVTAIC+AKLR+SDIQAAVQICS LHQRYKDFSPSL QGLLK FFPGK+ +D + DKN RAMKKRS+LKLLLELYFVGV++D +FVNIIKDLTS EHLKDR+A QTNLSLL+SFARQ R LGLP SGQEILEEF+KGLNIT EQKKF +KA H YYDAAAELLQSEH+SL Q EHEN+KILNAKGELS+E A++YEKLRKSYDHLYRGVSALAEALDM+PPVMPED HTTRVTT ED SSP GKDSS +EA+WDDEDTRAFYECLPDLRAFVPAVLLGE+E K+NDQS KT EQ S ESDQ Q+ + D AEVS S Q+ + + D +K K + EKGK K+A+RKG++EKEK+K EGT+LDGLLQRLP CVSRDLIDQLTVEFCY+NSKS+RKKL RALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKI+NIRFIGELCKFKIAPAGLVFSCLK CLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE VLRQLRKLPW+ECE YLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAV+VVDEVLEEIR+GLE+NDYGMQQ R+AHMR LGELYNYE +DSSVIFDTLYLILVFGH TAE+DVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGA+PLDIEFDLQDLF DLRP MTRYSS+EE++A L LEEHER ++K N+EKH DTEK S G S NGQ+ ++G++ NG H EA D+++DS S TI P GH +EE+LDEEN D+ DSE+DY +GG A+DED+EV VRQ++ +VDP EEA+F++E RALMQESL+SRKLELRARPTLNMMIPMN+FEGPTKDHHGRG EGESGD+TLDEEAGGSKEVRVKVLVKRG+KQQTK+MFIPRD +LVQSTKQKEAAELEEKQDIKRL+LEYNDREEEELNGLG Q W QSGG R +RGH W+GHGGR GSRHRY H+SGGGI+YSRR+
Sbjct: 1 MEHAEAECRVGGEH-HGKQDDEEAVARHEEFKKSVEAKMALRQSNLNPERPDSSFLRTLDSSIKRNTAVIKKLKQINEEQRESLIDELRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQICSFLHQRYKDFSPSLTQGLLKAFFPGKSGDDLEVDKNLRAMKKRSTLKLLLELYFVGVIEDGGIFVNIIKDLTSAEHLKDREATQTNLSLLASFARQGRTLLGLPQSGQEILEEFFKGLNITAEQKKFLRKALHTYYDAAAELLQSEHSSLHQTEHENAKILNAKGELSDENASSYEKLRKSYDHLYRGVSALAEALDMEPPVMPEDGHTTRVTTAEDTSSPLAGKDSSVVEAMWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKLNDQSPKTQEQPSGSPPESDQCQLASPDSAEVSADSGTLQEGKNEKGKDKDDKDKEKTKDPDKEKGKGKDAERKGESEKEKIKGLEGTSLDGLLQRLPSCVSRDLIDQLTVEFCYLNSKSNRKKLARALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIKNIRFIGELCKFKIAPAGLVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEQVLRQLRKLPWNECETYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEMNDYGMQQCRLAHMRLLGELYNYEQLDSSVIFDTLYLILVFGHRTAEQDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFVDLRPKMTRYSSIEEVNAVLVELEEHERTVSTDKANSEKHSDTEKPRSRSTSGNISGNGQIHANGIEENGRVH-EAMADSESDSESSTIDPEGHDEEEDLDEENPDDVCDSEDDYEEGGGLATDEDEEVHVRQRVIEVDPQEEAEFEKELRALMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHHGRGFEGESGDETLDEEAGGSKEVRVKVLVKRGNKQQTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGLGQQSAGWTQSGGSRVPNRGHTWEGHGGRSGGSRHRYLHYSGGGIYYSRRK 1194
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GVE7 ((Regulator of nonsense transcripts UPF2 {ECO:0000313|EMBL:GFZ14825.1}))
HSP 1 Score: 1900.18 bits (4921), Expect = 0.000e+0
Identity = 963/1196 (80.52%), Postives = 1054/1196 (88.13%), Query Frame = 0
Match: A0A7J0GVE7 ((Regulator of nonsense transcripts UPF2 {ECO:0000313|EMBL:GFZ14825.1}))
HSP 1 Score: 1900.18 bits (4921), Expect = 0.000e+0
Identity = 963/1196 (80.52%), Postives = 1054/1196 (88.13%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQ-QIVTQDIAEVSIGSEVSQD-CKNEKGKEKDDSNDKEKAKELEKGKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKV-SSGQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGIFYSRRR 1193
MEH E E R GGE GK DDEEA AR EEFKKSVE KM LRQSNLNPE P+ SFLRTLDSSIKRNTAVIKKLKQINEEQRESL+DELR VNLSKFVSEAVTAIC+AKLR+SDIQAAVQICS LHQRYKDFSPSL QGLLK FFPGK+ +D + DKN RAMKKRS+LKLLLELYFVGV++D +FVNIIKDLTS EHLKDR+A QTNLSLL+SFARQ R LGLP SGQEILEEF+KGLNIT +QKKF +KA H YYDAAAELLQSEH+SL Q EHEN+KILNAKGELS+E A++YEKLRKSYDHLYRGVSALAEALDM+PPVMPED HTTRVTT ED SSP GKDSS +EA+WDDEDTRAFYECLPDLRAFVPAVLLGE+E K+NDQS KT EQ S ESDQ Q+ + D AEVS S Q+ + + D +K K + EKGK K+A+RKG++EKEK+K EGT+LDGLLQRLP CVSRDLIDQLTVEFCY+NSKS+RKKL RALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKI+NIRFIGELCKFKIAPAGLVFSCLK CLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE VLRQLRKLPW+ECE YLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAV+VVDEVLEEIR+GLELNDYGMQQ R+AHMR LGELYNYE +DSSVIFDTLYLILVFGH TAE+DVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGA+PLDIEFDLQDLF DLRP MTRYSS+EE++A L LEEHER ++K N+EKH DTEK S G S NGQ+ ++G++ NG H EA D+++DS S TI P GH +EE+LDEEN D+ DSE+DY +GG A+DED+EV VRQ++ +VDP EEA+F++E RALMQESL+SRKLELRARPTLNMMIPMN+FEGPTKDHHGRG EGESGD+TLDEEAGGSKEVRVKVLVKRG+KQQTK+MFIPRD +LVQSTKQKEAAELEEKQDIKRL+LEYNDREEEELNGLG Q W QSGG R +RGH W+GHGGR GSRHRY H+SGGGI+YSRR+
Sbjct: 1 MEHAEAECRVGGEH-HGKQDDEEAVARHEEFKKSVEAKMALRQSNLNPERPDSSFLRTLDSSIKRNTAVIKKLKQINEEQRESLIDELRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQICSFLHQRYKDFSPSLTQGLLKAFFPGKSGDDLEVDKNLRAMKKRSTLKLLLELYFVGVIEDGGIFVNIIKDLTSAEHLKDREATQTNLSLLASFARQGRTLLGLPQSGQEILEEFFKGLNITADQKKFLRKALHTYYDAAAELLQSEHSSLHQTEHENAKILNAKGELSDENASSYEKLRKSYDHLYRGVSALAEALDMEPPVMPEDGHTTRVTTAEDTSSPLAGKDSSVVEAMWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKLNDQSPKTQEQPSGSPPESDQGQLASPDSAEVSADSGTLQEGKNEKGKDKDDKDKEKTKDPDKEKGKGKDAERKGESEKEKIKGLEGTSLDGLLQRLPSCVSRDLIDQLTVEFCYLNSKSNRKKLARALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIKNIRFIGELCKFKIAPAGLVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEQVLRQLRKLPWNECETYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQCRLAHMRLLGELYNYEQLDSSVIFDTLYLILVFGHRTAEQDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFVDLRPKMTRYSSIEEVNAVLVELEEHERTVSTDKANSEKHSDTEKPRSRSTSGNISGNGQIHANGIEENGRVH-EAMADSESDSESSTIDPEGHDEEEDLDEENPDDVCDSEDDYEEGGGLATDEDEEVHVRQRVIEVDPQEEAEFEKELRALMQESLDSRKLELRARPTLNMMIPMNVFEGPTKDHHGRGFEGESGDETLDEEAGGSKEVRVKVLVKRGNKQQTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGLGQQSTGWTQSGGSRVPNRGHTWEGHGGRSGGSRHRYLHYSGGGIYYSRRK 1194
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P6RED4 ((Putative up-frameshift suppressor 2 {ECO:0000313|EMBL:PRQ44765.1}))
HSP 1 Score: 1898.63 bits (4917), Expect = 0.000e+0
Identity = 932/1196 (77.93%), Postives = 1048/1196 (87.63%), Query Frame = 0
Match: A0A2P6RED4 ((Putative up-frameshift suppressor 2 {ECO:0000313|EMBL:PRQ44765.1}))
HSP 1 Score: 1898.63 bits (4917), Expect = 0.000e+0
Identity = 932/1196 (77.93%), Postives = 1048/1196 (87.63%), Query Frame = 0
Query: 1 MEHPENESRSG-GEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQ-QIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAKELEKGKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSSGQL-GRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGIFYSRRR 1193
M+H E ES G G + GK DDEEA ARLEE KKS+E KM LRQSNLNPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LMD+LRSVNLSKFVSEAVTAIC+AKLR+SDIQAAVQICSLLHQRYKDFSP+LVQGLLK+FFPGK+ +DPDAD+N RAMKKRS+LKLLLELYFVGV++D +FVNIIKDLTS EHLKDRD QTNL+LL+SFARQ R FLGLPLSG EI EEF+KGLNITP+QKKFFKKAF YY+AAAELLQSEHTSLRQMEHEN++ILNAKGELS+++A++YEKLRKSYDHLYR VSALAEALDMQPPVMPED HTTRVT+GEDASSP GKDSS LEAIWDDEDTRAFYECLPDLRAFVPAVLLGE+ESKVN+QSAKT EQ ++ E DQ Q T+D AE S Q+ K +EK +++ +++ +++ D+KG+ EKEKLK+ EGTNLD LLQRLPGCVSRDLIDQLTVEFCY+NSK++RKKLVR++F+VPRTSLELLPYYSRMVATLSTCMKDVSSML+ +LEEEFNFL+NKKDQMNIETKIRNIRFIGELCKF+IAPAGLVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET VRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARV+KVRPPLHQYIRKLLFSDLDKS++EHVLRQLRKLPW ECEPYLLKCFMKVH+GKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIR+GLELN+YGMQQRRIAHMRFLGELYNYEHVDSSVIF+TLYLIL+FGHGT E+DVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFL+HFQRYILSKG +PLD+EFDLQDLFA+LRPNMTRYSS+EE++AAL LEEH SEK N EKH DTEK S + SVN Q +++G + NG HE+ D+D+DSGS T+ P H EEELDEENHD+ +SEE+ DGG ASDE+DEV VRQK+ +VDP EEADF+ + +A+MQES+E R+ ELR RPTLNMMIPMN+FEG KDHHGR V G+SGD+ DEE+GGSK+V+VKVLVKRG+KQQTK+M+IPRD +L+QSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQ ++ QSGG R + RG W+G RG G R + +SG G++YSRR+
Sbjct: 9 MDHNEEESGGGAGAEPHGKQDDEEAVARLEEMKKSIESKMALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQICSLLHQRYKDFSPTLVQGLLKVFFPGKSGDDPDADRNLRAMKKRSTLKLLLELYFVGVIEDGGIFVNIIKDLTSGEHLKDRDTTQTNLTLLASFARQGRMFLGLPLSGPEIHEEFFKGLNITPDQKKFFKKAFQAYYEAAAELLQSEHTSLRQMEHENARILNAKGELSDDSASSYEKLRKSYDHLYRNVSALAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDSSVLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAESKVNEQSAKTQEQPTEPAPELDQSQQATEDAAESSADVGALQEGKI---REKGKEKEEKDKDKIKDADKEKGDKKGENEKEKLKSIEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRSVFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTLEHVLRQLRKLPWGECEPYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRLGLELNEYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLYLILIFGHGTTEQDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLMHFQRYILSKGVLPLDVEFDLQDLFAELRPNMTRYSSLEEVNAALVELEEH-----SEKANNEKHSDTEKSSRRTTSNKMSVNEQGVANGTEGNGAVHEDH-RDSDSDSGSGTVDPDRH--EEELDEENHDDGSESEEEDDDGGGPASDEEDEVHVRQKVAEVDPQEEADFELDLKAVMQESMEQRRQELRGRPTLNMMIPMNVFEGSIKDHHGR-VGGDSGDEG-DEESGGSKDVQVKVLVKRGNKQQTKQMYIPRDCSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQTMNYAQSGGNRFAGRGSTWEGTSSRGGGPRRYHSSYSGAGVYYSRRK 1191
BLAST of XM_017367186.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G2VPN6 ((Regulator of nonsense transcripts UPF2 {ECO:0000313|EMBL:PHT34922.1}))
HSP 1 Score: 1891.32 bits (4898), Expect = 0.000e+0
Identity = 936/1210 (77.36%), Postives = 1050/1210 (86.78%), Query Frame = 0
Match: A0A2G2VPN6 ((Regulator of nonsense transcripts UPF2 {ECO:0000313|EMBL:PHT34922.1}))
HSP 1 Score: 1891.32 bits (4898), Expect = 0.000e+0
Identity = 936/1210 (77.36%), Postives = 1050/1210 (86.78%), Query Frame = 0
Query: 1 MEHPENESRSGGEQSQGKPDDEEAGARLEEFKKSVEFKMTLRQSNLNPESPEPSFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICEAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKIFFPGKTLEDPDADKNSRAMKKRSSLKLLLELYFVGVVDDCSVFVNIIKDLTSMEHLKDRDAAQTNLSLLSSFARQARFFLGLPLSGQEILEEFYKGLNITPEQKKFFKKAFHVYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSEETATAYEKLRKSYDHLYRGVSALAEALDMQPPVMPEDAHTTRVTTGEDASSPGPGKDSSTLEAIWDDEDTRAFYECLPDLRAFVPAVLLGESESKVNDQSAKTHEQSSDLTTESDQ-QIVTQDIAEVSIGSEVSQDCKNEKGKEKDDSNDKEKAK---------ELEKGKEKEADRKGDAEKEKLKNPEGTNLDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDVLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGAVPLDIEFDLQDLFADLRPNMTRYSSVEELDAALAVLEEHERKNLSEKNNTEKHLDTEKVSSGQLGRSSVNGQMLSDGVKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKITKVDPLEEADFDREFRALMQ-------ESLESRKLELRARPTLNMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGSKQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGIFYSRRR 1193
MEHPE+E R G E + K +DEEA AR EEFKKSVE KM LRQ+NLNPE P+ FLRTLDSSIKRNTAVIKKLKQINEEQRE LM+ELR+VNLSKFVSEAV AIC+AKLR +DIQAAVQICSLLHQRYKDFSPSLVQGL+K+FFPGK ED D DKN+RAMKKRS+LKLLLEL+FVGVVDD +FVNIIKDLTS+EHLKDRDA QTNLSLL+SFARQ R+ LGLPL+GQ ILEE +K LN+T +QK+FF+KAF Y+DA+ ELLQSEH SLRQMEHEN KIL+AKGEL+EE A+AYEKLRKSYD LYRG+S LAEALDMQPPVMPED HTTRVT+GEDASSPG KDSS LEA+WDDEDTRAFYECLPDLRAFVPAVLLGE+E K+++Q AK E S D ++D+ Q ++ AE + ++ Q+ +N+KGK+KD+ + ++ + EK +EKEA+RKGD +KEK K EGT+LD LLQRLPGCVSRDLIDQLTVEFCY+NSKS+RKKLVRALF+VPRTSLELLPYYSRMVATLSTCMKDVSSML+QLLEEEFNFL+NKKDQMNIETKIRNIRFIGELCKF+IAP GLVFS LKACLDDF+HHNIDVACNLLETCGRFLYRSPET +RMANMLEILMRLKNVKNLDPRH TLVENAYYLCKPPERS RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECE YLLKCFMKVHRGKYGQIHLIASLTAGLSRYHD+F+V+VVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYE VDSSVIFDTLYLILVFGHGT+E+DVLDPPEDCFRIRMV+TLLETCGHYFDRGSSKRKLDRFLIHFQRYIL+KG +PLDIEFDLQDLFA+LRPN+ RY+S+E+++AALA LEEHER +SEK N EKH +TEK+ S SVNGQ L++G++ NG HEE E T++DS S TI GH D+EE D+ N DE D+E++ +G + SDE+D+V VR K+ +VDPLEEA+F+R RALMQ ESL+SRKLELR RPTLNM IPMN+FEGPTKDH RGVEGESGD+TLDE AGGSKEV VKVLVKRG+KQQTK+M IPRD +L+QSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQP SW QS G R + RG+ WD GRG+GSRHRY HHSGGG++Y RRR
Sbjct: 1 MEHPEDECRVGVENPE-KHEDEEAVARHEEFKKSVEAKMVLRQNNLNPERPDNGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMEELRNVNLSKFVSEAVAAICDAKLRAADIQAAVQICSLLHQRYKDFSPSLVQGLMKVFFPGKVAEDVDVDKNARAMKKRSTLKLLLELHFVGVVDDTGIFVNIIKDLTSVEHLKDRDATQTNLSLLASFARQGRYLLGLPLAGQAILEELFKALNVTNDQKRFFRKAFQTYHDASVELLQSEHASLRQMEHENEKILSAKGELNEENASAYEKLRKSYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGEDASSPGGSKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKLSEQLAKVQEHSIDSAPDADETQTAARETAEGA--ADAVQEDRNDKGKDKDEKDKEKTKDKSKEKDKEHDKEKAREKEAERKGDGDKEKAKGVEGTSLDSLLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPPGLVFSTLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHITLVENAYYLCKPPERSTRVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDDFSVAVVDEVLEEIRVGLELNDYGMQQRRIAHMRFLGELYNYELVDSSVIFDTLYLILVFGHGTSEQDVLDPPEDCFRIRMVVTLLETCGHYFDRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDLQDLFAELRPNIMRYASIEDVNAALADLEEHERIVMSEKGNNEKHSETEKIPSRTTSGMSVNGQSLANGIEENG-LHEEIME-TESDSESGTIEHVGHEDDEETDDWNRDERCDTEDESDEGDEPGSDEEDKVHVRSKVAEVDPLEEAEFERALRALMQASIGRRLESLDSRKLELRGRPTLNMTIPMNVFEGPTKDH--RGVEGESGDETLDEGAGGSKEVPVKVLVKRGNKQQTKKMLIPRDCSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPPSWTQSSGSRVAHRGNTWDA-PGRGSGSRHRYLHHSGGGLYYGRRR 1202
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6Z5R2 | E-Value: 0.000e+0, PID: 82.78 | (Putative regulator of nonsense transcripts UPF2 i... [more] |
| A0A6P6UFN1 | E-Value: 0.000e+0, PID: 79.38 | (regulator of nonsense transcripts UPF2-like {ECO:... [more] |
| A0A6P6U9Y0 | E-Value: 0.000e+0, PID: 79.38 | (regulator of nonsense transcripts UPF2-like isofo... [more] |
| A0A6P6U923 | E-Value: 0.000e+0, PID: 79.12 | (regulator of nonsense transcripts UPF2-like isofo... [more] |
| A0A068U821 | E-Value: 0.000e+0, PID: 78.43 | (Uncharacterized protein {ECO:0000313|EMBL:CDP0432... [more] |
| F6HNK8 | E-Value: 0.000e+0, PID: 79.77 | (Uncharacterized protein {ECO:0000313|EMBL:CCB5622... [more] |
| A0A2R6PL20 | E-Value: 0.000e+0, PID: 80.52 | (Regulator of nonsense transcripts like {ECO:00003... [more] |
| A0A7J0GVE7 | E-Value: 0.000e+0, PID: 80.52 | (Regulator of nonsense transcripts UPF2 {ECO:00003... [more] |
| A0A2P6RED4 | E-Value: 0.000e+0, PID: 77.93 | (Putative up-frameshift suppressor 2 {ECO:0000313|... [more] |
| A0A2G2VPN6 | E-Value: 0.000e+0, PID: 77.36 | (Regulator of nonsense transcripts UPF2 {ECO:00003... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |