Resource Type:
Polypeptide
Name:
XM_017367587.1
Identifier:
XM_017367587.1-protein
Sequence:
MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKC
EALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRP
NEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCAR
DPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAA
AFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLV
RESIMASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSY
LEGPEKYLSQMNFEDKGAFQSGLPKFTSAKNDDVKILLQCTSPLLWSHNS
AVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKA
MPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYV
RDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSG
GDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRM
MGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARG
DDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEAR
YISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGY
NPLPEPCSLTIGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSD
GSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSE
VNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVG
SLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSKFVCLEVSFKNCSN
EPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCL
EPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMD
DEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCET
LGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVT
LRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL
Sequence Length:
1139
Sequence Checksum:
d1e39367f7de3ecedfb574d2b55f1df8
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367587.1, derives from mRNA, XM_017367587.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZNG9 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1545.41 bits (4000), Expect = 0.000e+0
Identity = 807/1144 (70.54%), Postives = 941/1144 (82.26%), Query Frame = 0
Match: A0A5B6ZNG9 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1545.41 bits (4000), Expect = 0.000e+0
Identity = 807/1144 (70.54%), Postives = 941/1144 (82.26%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIM-ASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKG-GTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1139
MF QFGATA++LSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGF+VSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALR MAGIRLHV++P+V+VAV KCARDPSVYVRKCAANALPKLHDLR EENT IEEIVGILLNDNSP VVGAAAAAFASVCPNNL+LIGR+Y++LCETLPDVEEWGQIVLI ILLRY+ AR GLVRESIM S +E SE DGPD +FA+KE T+ + G Y+S+L M S+SYLEGP+KYLS+ ++ D+G+ TSAK NDDVKILLQCTSPLLWSHN AV+LAAAG+HWIMAP+ED++RIVKPLLF+LRSS+AS YV LCNIQVFAKA+PSLFA Y EDFFICSSD+YQIKALKLEILS+IA +SSI IFQEFQDY+ D DRRFAADTVAAIGLCA+RLP+VANTCLEGLLAL +SLN+D S G++ VLIQAIISI++IIKLDP HE+VI+ LVR+LDSIKVP ARAM+I M+GEYNS GHI+P+MLT+VL YLA CF EA+ETKLQIL AVKV+LCA G+DL K++LSYVLELAKCD NYD+RDRAR+++KLL+ Y+ S L EE + E+K++ +LAE +F + K S E NYRFYLPGSLSQIVLHAAPGY PLP+PCSL D S S++V+G T+SD YG+DD + SGS ++++ S S+ S GSSG+ +ESGSASEGD + G LIN SDVGN A+ N NG+SE N+ + +DFGE+MS RALESWLDE+P SS+N+ E S + SSARIS+G + RVKPKSY LLD NGNGL VDY FSSE+SS S VC+EVSFKNCS EP K++L DE+ G D+++Q L T ES H NDV +VP+EEI LE GQ++K+I++V FHHHLLP+KLVL C G K PVKL PDIGYFVKP+ MD E F KESQL GMFEY RRCTF H+ EL ++ GE SLVKDKFLV+CETL LKMLSNAN+ L+SVDMP+ N DD SGL LRF+ EILSNS+PCLITV++ G CSEPLN +VKVNCEETVFGLNLLN++V+F+ EP L
Sbjct: 1 MFPQFGATAETLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFEVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRAMAGIRLHVISPLVLVAVGKCARDPSVYVRKCAANALPKLHDLRQEENTTSIEEIVGILLNDNSPGVVGAAAAAFASVCPNNLSLIGRNYRRLCETLPDVEEWGQIVLIGILLRYLTARHGLVRESIMLPSCSTESYHSEKDGPDTNFALKENTDDMGGGIYESELADMISRSYLEGPDKYLSRSSYTDRGSSGLDCSCCTSAKSNDDVKILLQCTSPLLWSHNGAVVLAAAGIHWIMAPREDVKRIVKPLLFVLRSSNASKYVVLCNIQVFAKALPSLFAPYYEDFFICSSDSYQIKALKLEILSSIAIDSSISFIFQEFQDYISDPDRRFAADTVAAIGLCAKRLPSVANTCLEGLLALIRQESLNSDVVSVDGEAGVLIQAIISIKTIIKLDPSGHEQVIMQLVRSLDSIKVPAARAMIIWMVGEYNSIGHIIPRMLTTVLGYLAWCFNSEAIETKLQILNTAVKVLLCAEGEDLRTFKRILSYVLELAKCDSNYDVRDRARILKKLLSCYMGSHGLEEEPKCQPENKDLPHVLAENIFRGQTKPTSPEHTNYRFYLPGSLSQIVLHAAPGYEPLPKPCSLIFNDLSHCSDVVQGITTNSDSYGIDDPDSVSGSLNEENTSGYSSQDSITGSSGSGGSNESGSASEGDHSAGPLINLSDVGN-AHKNQNGSSEENNARPGSDDFGEMMSKRALESWLDENPGLSSQNSSEQSHLRRSSARISIGDIGCRVKPKSYALLDPTNGNGLSVDYTFSSEISSISPLLVCVEVSFKNCSTEPMSKLILLDEESNKGLDSADQVLPTTESPLTSH-NDVPTLVPMEEINSLEAGQTTKRILQVRFHHHLLPLKLVLWCDGKKHPVKLRPDIGYFVKPILMDIEMFTNKESQLPGMFEYIRRCTFTGHIGELNNDMGESSLVKDKFLVICETLALKMLSNANIFLVSVDMPIAANLDDASGLRLRFSSEILSNSIPCLITVSVEGKCSEPLNVSVKVNCEETVFGLNLLNRVVNFVVEPTL 1142
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BEB8 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1532.69 bits (3967), Expect = 0.000e+0
Identity = 802/1150 (69.74%), Postives = 931/1150 (80.96%), Query Frame = 0
Match: A0A5J5BEB8 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1532.69 bits (3967), Expect = 0.000e+0
Identity = 802/1150 (69.74%), Postives = 931/1150 (80.96%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIM-ASPYSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVK-------GGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1139
MF QFGATA++LSKAST++FRIGTDAHLYDDP+DV+I PLLDSKFD+EKCEALKRLLALIAQGFDVSN+FPQVVKNVASQS+EVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALR MAGIRLHV+AP+V+VAV KCARDPSVYVRK AANALPKLHDLRLEENT IEEIVGILLNDNSP+VVGAAAAAFASVCPNNL+LIGR+Y++LCETLPDVEEWGQIVLIEILLRYVIAR GLVRESIM S +E E DGP+ +FA+KE + + G Y+S+L M S+SYLEGP+KYLS+ N+ D G+ TSAK NDDVKILLQCTSPLLWSHN AV+LAAAG+HWIMAP+ D++RIVKPLLF+LRSS+AS YV LCNIQVFAKA+PSLFA Y EDFFICSSD+YQIKALKLEILS+IA +SSI IFQEFQDY+ D DRRFAADTVAAIGLCA+RLPNVANTCLEGLLALT +SLN D S G++ VLIQAIISI +IIKLDPP +EKVI+ LVR+LDSIKVP ARAM+I M+GEYNS GHI+P+MLT+VL YL CF EA+ETKLQIL A KV+LCA G+DL K++LSYVLELAKCD NYD+RDRAR+++KL Y+ S L EEA+Y E+K++SC+LAE +F + K S E NYRFYLPGSLSQIVLHAAPGY PLP+PCSL D SN+V+ G T+S+ YG+DD + SGS + +S S S S GSS + + SGSASEG+ + G LIN SDV N AY N NG SE N S +D GE+MS RALESWLDE+P SS+++ E S Q SSARIS+G + RVKPKSY LLD NGNGL VDY+FSS++SS S VC+EVSFKNCS EP ++L DE+ G D+++Q L T +S H NDV +VP+EEI LE GQ++K+I++V FHHHLLP+KLVL C K PVKL PDIGYFVKPL MD E F KESQL GMFEY RRC FIDH+ +L ++KGE + VKDKFLV+CETL LKMLSNAN+ L+SVDMP+ N DD SGL LRF+CEILSNS+PCLITV++ G CSEPLN +VKVNCEETVFGLNLLN++V+FL EP L
Sbjct: 45 MFPQFGATAETLSKASTMMFRIGTDAHLYDDPEDVNIVPLLDSKFDTEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSVEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRAMAGIRLHVIAPLVLVAVGKCARDPSVYVRKSAANALPKLHDLRLEENTTTIEEIVGILLNDNSPAVVGAAAAAFASVCPNNLSLIGRNYRRLCETLPDVEEWGQIVLIEILLRYVIARHGLVRESIMIPSCSTESYHYEKDGPETNFALKENIDDMGGGIYESELADMVSRSYLEGPDKYLSRSNYTDGGSSGLDCSSCTSAKGNDDVKILLQCTSPLLWSHNGAVVLAAAGIHWIMAPRRDVKRIVKPLLFVLRSSNASKYVVLCNIQVFAKALPSLFAPYYEDFFICSSDSYQIKALKLEILSSIAIDSSISFIFQEFQDYISDPDRRFAADTVAAIGLCAKRLPNVANTCLEGLLALTRQESLNIDVGSVDGEAGVLIQAIISIMAIIKLDPPGNEKVIIQLVRSLDSIKVPAARAMIIWMVGEYNSIGHIIPRMLTTVLEYLTWCFNSEAVETKLQILNTAAKVLLCAEGEDLQTFKRILSYVLELAKCDSNYDVRDRARILKKLTPCYMGSHGLEEEAKYQPENKDLSCVLAESIFRGQTKPTSLEHMNYRFYLPGSLSQIVLHAAPGYEPLPKPCSLIFDDLGHCSNVVQGIKSSQEGTTNSESYGIDDPDSVSGSLNGESTSGYSSRDSITGSSDSGGNNGSGSASEGEYSAGPLINLSDVSN-AYKNQNGGSEENKTHSGSDDLGEVMSKRALESWLDENPGMSSQDSSEQSHLQRSSARISIGDIGRRVKPKSYALLDPTNGNGLSVDYIFSSKISSISPLLVCVEVSFKNCSTEPMSTLILLDEESNRGLDSADQVLATTKSPLTSH-NDVPTLVPMEEITSLEAGQTTKRILQVRFHHHLLPLKLVLWCDEKKHPVKLRPDIGYFVKPLLMDIEMFTNKESQLPGMFEYIRRCAFIDHIGDLNNDKGESAQVKDKFLVICETLALKMLSNANIFLVSVDMPIAANLDDASGLRLRFSCEILSNSIPCLITVSVEGKCSEPLNLSVKVNCEETVFGLNLLNRVVNFLGEPSL 1192
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7H4D6 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1514.98 bits (3921), Expect = 0.000e+0
Identity = 786/1167 (67.35%), Postives = 921/1167 (78.92%), Query Frame = 0
Match: A0A7J7H4D6 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1514.98 bits (3921), Expect = 0.000e+0
Identity = 786/1167 (67.35%), Postives = 921/1167 (78.92%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYSEY-LDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGL-PKFTSAKNDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYV-----------------ALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKG-------GTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGN-DVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1139
MF QFGATA+SLSKAST+VFRIGTDAHLYDDP+DV+IAPLLDSKFDSEKCEALKRLLALIAQGFDV+N+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALR MAGIRLHV+AP+V+VAV KCARDPSVYVRKCAANALPKLHDLRLE+N IEE+VGILLNDNSP VVG AAAAFASVCPNNL+LIGR+Y +LCETLPDVEEWGQIVLI ILLRYVIAR GLV+ESIM S + SE D PD +F +KE + G Y+S+L +M S+SYLEGPEKYLS+ + D+G F L +S N DVKILLQCT PLLWSHNSAV+LAAAG+HWIMAP+ED++RIVKPLLFILRSS+AS YV LCNIQVFAKAMP LF+ Y EDFFICSSD YQIKALKLEILS+IA +SSI VIFQEFQDY+RD DRRFAADTVAAIGLC +RLP VAN CLEGLLALT + LN+D S G++ VL+QA+ISIR+II LDPP HEKVI+ LVR L+ IKVP ARAM+I M+GEYNS G I+P+ML +VL YLA CFT EA+E KLQIL A+KV+LCA+G+D+ K++LSYVLELAKCD++YD+RDRAR ++KLL+ ++ S +L +EA+ + E+K++ ++A+ LF + K + EP NYRFYLPGSLSQ+V HAAPGY PLP PCSL+ + SN V+ T+SD GVD + SGS +++S S S+ S GSS + G+E GS SE D+N LI+FSDV NA N NG + N+ QSR +DFGELMS +ALESWLDE P S+N+ E S Q SSARIS+G +S RVK KS+TLLD GNGL VDY FSSE+SS S VC+EVSFKNCS EP K+LL DE+ G D++EQAL ++ S H D +VP+EEI L+ GQS+K+I++V FHHHLLP+KL L C+G K PVKL PDIGYFVKPLPMD E F KESQL GMFEY R CTF DH+ ELK+EKG+ S++KDKFL +CE+L LKMLSNANL L+SVDMPV N DD SGL LRF+ EILSNS PCLITVT++G C EPL+ +VKVNCEETVFGLNLLN+IV+FLAEP L
Sbjct: 1 MFPQFGATAESLSKASTMVFRIGTDAHLYDDPEDVNIAPLLDSKFDSEKCEALKRLLALIAQGFDVANFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRAMAGIRLHVIAPLVLVAVGKCARDPSVYVRKCAANALPKLHDLRLEDNITEIEEMVGILLNDNSPGVVGPAAAAFASVCPNNLSLIGRNYIRLCETLPDVEEWGQIVLIGILLRYVIARHGLVKESIMLSSCATVTYHSENDDPDTNFELKENRSNKGSGTYESELAEMVSRSYLEGPEKYLSRSSHADRGFFGLDLSSFTSSKSNSDVKILLQCTLPLLWSHNSAVVLAAAGVHWIMAPREDVKRIVKPLLFILRSSNASKYVFCTVLLENANTLANYVLVLCNIQVFAKAMPCLFSPYFEDFFICSSDPYQIKALKLEILSSIAIDSSILVIFQEFQDYIRDPDRRFAADTVAAIGLCGRRLPKVANICLEGLLALTRQELLNSDIGSVDGEAGVLVQALISIRAIINLDPPCHEKVIIQLVRGLELIKVPAARAMIIWMVGEYNSIGDIIPRMLPTVLKYLAWCFTSEAVEAKLQILNTAIKVLLCAKGEDMWTFKRILSYVLELAKCDLSYDVRDRARTLKKLLSCHIGSHDLDKEAKGLPENKHLQTVVADFLFRGQTKPL-PEPINYRFYLPGSLSQMVFHAAPGYEPLPNPCSLSCDELGCSSNDVQRIKALREEATNSDSVGVDGPDTVSGSLNEESTSDYSSQDSITGSSDSAGGGNEIGSVSETDDNADPLIHFSDVSNAC-TNQNGGLQDNNAQSRLDDFGELMSKKALESWLDEHP--SQNSSELSHVQRSSARISIGDISGRVKLKSHTLLDPAIGNGLNVDYTFSSEISSVSPLLVCVEVSFKNCSTEPMSKLLLVDEESSKGLDSAEQALASSGSPLTTH-KDGPTVVPMEEISSLDAGQSTKRILQVRFHHHLLPLKLDLWCNGKKHPVKLRPDIGYFVKPLPMDIELFTSKESQLPGMFEYIRSCTFSDHIGELKNEKGDSSILKDKFLAICESLALKMLSNANLFLVSVDMPVAANLDDASGLRLRFSSEILSNSNPCLITVTVKGKCFEPLSVSVKVNCEETVFGLNLLNRIVNFLAEPGL 1162
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RRF3 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1513.82 bits (3918), Expect = 0.000e+0
Identity = 785/1149 (68.32%), Postives = 918/1149 (79.90%), Query Frame = 0
Match: A0A2R6RRF3 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1513.82 bits (3918), Expect = 0.000e+0
Identity = 785/1149 (68.32%), Postives = 918/1149 (79.90%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYSEY-LDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKND-DVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVKG-------GTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1139
MF QFGATAD+LSKAST+VFRIGTDAHLYDDP+DV+IAPLLDSKFDSEKCEALKRLLALIAQGFDVSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRAWALR MAGIRLHV++PIV+VAV KCARDPSVYVRKCAANALPKL+DLRLEENT IEEIVGILLNDNSP VVGAAAAAFASVCPNNL+LI R+Y++LCETLPDVEEWGQIVLI ILLRYVIAR GL +ESIM S + E DG D +F +KE N Y+S+L ++ S+SYLEGPEKYLS + DKG+F FTSAKN+ DVKILLQCT PLLWSHNSAV+LAAAG+HWIMAP+ED++RIVKPLLF+LRSS+AS YV LCNIQVFAKAMP +F+ Y EDFFICSSD+YQIKALKLEILS+IAT++SI VIFQEFQDYVRD DRRFAADTVAAIGLCA+RLP VA+ CLEGLLALT +SLN+D S GG+ VL+QA+ISI++II LDPPRHEKVIV LV++L+ IKVPTARAM+ M+GEYNS G I+P ML +VL YLA CFT EALE KLQIL AVKV+L ++G+D +++LSYVLELA CD++YD+RDRAR ++KLL+ + S +L EEA+ + E+K++ ++A+ LF + K EP NYRFYLPGSLSQIVLHAAPGY PLP PCSL+I + SN V+G T SD YGVD S+ SGS D + S SE S GS G+ +ESGSAS D+N LINFSDV NA A NG S+ N+ SR +DF E+MS AL+SWLDE P S+++ E S Q SSARIS+G + RV+ KS+ LLD GNGL VDY FSSE+SS S VC+EVSF NCS E K LL DE+ G +++E+AL ++ S + DV +VP+E+I L+ GQ+ K++++V FHHHLLP+KLVL C+G K PVKL PDIGYFVKPLPM+ E F KESQL GMFEY R CTF DH+ ELK+EKG+ SL+KDKFLV+CE+L LKML NANL L+SVDMPV N DD SGLCLRF+ EILSNS+PCLITVT+ G C EPL +VKVNCEETVFGLNLLN+IV+FLAEP L
Sbjct: 1 MFPQFGATADTLSKASTMVFRIGTDAHLYDDPEDVNIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPLVRAWALRAMAGIRLHVISPIVLVAVGKCARDPSVYVRKCAANALPKLYDLRLEENTATIEEIVGILLNDNSPGVVGAAAAAFASVCPNNLSLIERNYRRLCETLPDVEEWGQIVLIGILLRYVIARHGLAKESIMLSSCATVSYRCENDGSDTNFELKENGNDKGCDVYESELPEIVSRSYLEGPEKYLSWSSNADKGSFGLDYSFFTSAKNNYDVKILLQCTLPLLWSHNSAVVLAAAGVHWIMAPREDVKRIVKPLLFVLRSSNASKYVVLCNIQVFAKAMPCVFSPYYEDFFICSSDSYQIKALKLEILSSIATDASISVIFQEFQDYVRDPDRRFAADTVAAIGLCARRLPKVADMCLEGLLALTRQESLNSDIVSVGGEDGVLVQALISIKAIINLDPPRHEKVIVQLVQSLELIKVPTARAMIFWMVGEYNSIGGIIPIMLPTVLKYLAWCFTSEALEAKLQILNTAVKVLLSSKGEDTWTFRRILSYVLELAICDLSYDVRDRARALKKLLSSLIVSHDLEEEAKGLPENKDLKTVVADFLFRGQSKP-CPEPINYRFYLPGSLSQIVLHAAPGYEPLPNPCSLSIDELGHDSNDVQGIKALRERPTSSDSYGVDGSDTVSGSLDGGNTSDYSSEYSITGSGGD---EESGSASGRDDNADPLINFSDVSNAC-ATQNGRSQDNNTPSRFDDFEEVMSKEALDSWLDEHP--SQSSSELSHVQRSSARISIGDMGGRVRLKSHKLLDPAIGNGLSVDYTFSSEISSVSPLLVCVEVSFTNCSTEAMSKFLLLDEESSKGLNSAEEALALSK-SPLTSDKDVPTLVPMEDINSLDAGQTIKRVLQVRFHHHLLPLKLVLWCNGKKHPVKLRPDIGYFVKPLPMNIEMFTSKESQLPGMFEYKRSCTFTDHIGELKNEKGDSSLIKDKFLVLCESLALKMLCNANLFLVSVDMPVAANLDDASGLCLRFSSEILSNSIPCLITVTIEGKCFEPLTVSVKVNCEETVFGLNLLNRIVNFLAEPIL 1141
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M5X762 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1489.94 bits (3856), Expect = 0.000e+0
Identity = 762/1144 (66.61%), Postives = 909/1144 (79.46%), Query Frame = 0
Match: M5X762 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1489.94 bits (3856), Expect = 0.000e+0
Identity = 762/1144 (66.61%), Postives = 909/1144 (79.46%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKN-DDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLT---IGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1137
MF QFGATAD+LSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGF+VSN+FPQVVKNVASQSLEVKKLVYLYLLHYA+KRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHV+AP+V+VA KCARDPSVYVRKCAANALPKLHDLRL+ENT GIEEI+GILLND+SP VVGAAAAAF+SVCPNNL LIGR+YK+LCE LPDVEEWG+I+LI ILLRY+IAR GLV+ESIM S +S E SE D D + A+ E+ +S G YQS+L + S+ Y+EGP ++LS+++ +K A + FTS KN DDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAP EDL+RIVKPLLF+LRSS+AS YV LCN+QVFAKA+PSLF+ Y EDFFICSSD+YQIKALKL+IL+ IAT+SSI I +EFQDY+RD DRRFAADTVA IG+CAQRLP +ANTCLE LLALT Q + + S G++ +LIQAI+SI+SII+ DPP HEKVI+ LVR+L+SIKVP ARA+++ M+GEYNS G ++PKML +VL YLA CFT E LETKLQI VKV+L A+G+DL KK+L YVLELAKCD+NYDIRDRA +RK+L+ YL S L EE +++ K+ SC+LAE LF + K M EP ++RFYLPGSLSQIVLHAAPGY PLP+PCSL + + FG +G T+ D Y D+ + S D+++ SS S+ S+ SSG+ +E+GSASEGDEN+ LI FSDVGNA N + N +DFGEL+SNRALESWLDE P SS N E S + SSARIS+G + ++KPKSY LLD VNGNGL+ DY FSSE+SS S F+C+EVSFKNCS E I L DE+ G D+ +QA + ESS+ P NN+ +V VEEI LEPGQ+ + ++V FHHHLLP+KL L C+G + PVKL PDIGYFVK LPMD E F +KES LRGMFE RRCTF DH++EL +KG+ SLV+DKFLV+C L LKMLS+ANL L+SVD+PV N DD +GLCLRF+ ++LS S PCLIT+T++G CSEPL +VKVNCEETVFGLNLLN+IV+ L EP
Sbjct: 1 MFPQFGATADTLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFEVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAQKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLVLVAAGKCARDPSVYVRKCAANALPKLHDLRLDENTAGIEEIIGILLNDHSPCVVGAAAAAFSSVCPNNLALIGRNYKRLCEILPDVEEWGKIILIGILLRYIIARHGLVKESIMFSLHSTENSQSEKDCSDTNSALVEDNGDMS-GRYQSELANIVSRCYIEGPAEHLSRLSLMNKDASECNYASFTSGKNNDDVKILLQCTSPLLWSNNSAVVLAAAGVHWIMAPIEDLKRIVKPLLFVLRSSNASKYVVLCNVQVFAKAIPSLFSLYFEDFFICSSDSYQIKALKLDILAYIATDSSISFILKEFQDYIRDPDRRFAADTVAGIGICAQRLPEMANTCLEFLLALTRQQLMTGEFGSVDGEADILIQAIMSIKSIIQQDPPSHEKVIIQLVRSLNSIKVPAARAIIVWMVGEYNSLGDLIPKMLATVLKYLAWCFTSEELETKLQICNTTVKVLLHAKGNDLLTIKKVLIYVLELAKCDLNYDIRDRAHFLRKILSTYLDSRGLEEETNCLAQHKDSSCVLAEYLFGGQKKPMPHEPIDHRFYLPGSLSQIVLHAAPGYEPLPKPCSLRCDGLKMNEFG----EGVTNGDPYVTDNEDSESEFLDEENASSYSSQHSDMDSSGSGGSEEAGSASEGDENSHPLIQFSDVGNA-------NEKKNIASQSASDFGELLSNRALESWLDEQPGFSSTNTSEQSQVRRSSARISIGDIGGQIKPKSYALLDPVNGNGLKADYSFSSEISSISPLFLCIEVSFKNCSKEIVSDITLVDEESGKGMDSVDQASGSRESSTTPENNEPN-LVSVEEIASLEPGQAMTRTVQVRFHHHLLPLKLTLYCNGKRHPVKLRPDIGYFVKALPMDVEAFTKKESHLRGMFECVRRCTFTDHIKELDKDKGDDSLVEDKFLVICRNLALKMLSSANLHLVSVDLPVAANLDDATGLCLRFSSKLLSTSAPCLITITVQGRCSEPLEMSVKVNCEETVFGLNLLNRIVNVLVEP 1131
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314Y7E0 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1486.86 bits (3848), Expect = 0.000e+0
Identity = 760/1144 (66.43%), Postives = 910/1144 (79.55%), Query Frame = 0
Match: A0A314Y7E0 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1486.86 bits (3848), Expect = 0.000e+0
Identity = 760/1144 (66.43%), Postives = 910/1144 (79.55%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKN-DDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSL---TIGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1137
MF QFGATAD+LSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGF+VSN+FPQVVKNVASQSLEVKKLVYLYLLHYA+KRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHV+AP+V+VA KCARDPSVYVRKCAANALPKLHDLRL+ENT GIEEI+GILLND+SP VVGAAAAAF+SVCPNNL LIGR+YK+LCE LPDVEEWG+I+LI ILLRY IAR GLV+ESIM S +S E SE D D + A+ E++ +S G YQS+L + S+ Y+EGP +YLS+++ +K A + +FTS KN DDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAP EDL+RIVKPLLF+LRSS+AS YV LCN+QVFAKA+PSLF+ Y EDFFICSSD+YQIKALKL+IL+ IAT+SSI I +EFQDY+RD DRRFAADTVA IG+CAQRLP +ANTCLE LLALT Q + + S G++ +LIQAI+SI+SII+ DPP HEKVI+ LVR+L+SIKVP ARA+++ M+GEYNS G ++PKML +VL YLA CFT E LETKLQI VKV+L A+G+DL KK+L YVLE+AKCD+NYDIRDRA +RK+L+ YL S L EE +++ K+ SC+LAE LF + K MS EP ++RFYLPGSLSQIVLHAAPGY PLP+PCSL + + FG +G T+ D Y D+ + S D+++ SS S+ S+ SSG+ +E+GSA+EGDEN+ LI FSDVGNA + + N +DFGEL+SNRALESWLDE P SS N E + SSARIS+G + +VKPKSY LLD VNGNGL+VDY FSSE+SS S F+C+EVSFKNCS E I L DE+ G D+ +QA + ESS+ P NN+ +V VEEI LEPG + + ++V FHHHLLP+KL L C+G + PVKL PDIGYFVK LPMD E F +KES LRGMFE RRCTF DH++EL +KG+ SLV+DKFLV+C+ L LKMLS+ NL L+SVD+PV N DD +GLCLRF+ ++LS S+PCLIT+T+ G CSEPL +VKVNCEETVFGLNLLN+IV+ L EP
Sbjct: 1 MFPQFGATADTLSKASTIVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFEVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAQKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLVLVAAGKCARDPSVYVRKCAANALPKLHDLRLDENTAGIEEIIGILLNDHSPCVVGAAAAAFSSVCPNNLALIGRNYKRLCEILPDVEEWGKIILIGILLRYTIARHGLVKESIMFSLHSTENSQSEKDCSDTNSALVEDSGDMS-GRYQSELANIVSRCYIEGPAEYLSRLSLMNKDASECNYARFTSGKNNDDVKILLQCTSPLLWSNNSAVVLAAAGVHWIMAPIEDLKRIVKPLLFVLRSSNASKYVVLCNVQVFAKAIPSLFSLYFEDFFICSSDSYQIKALKLDILAYIATDSSISFILKEFQDYIRDPDRRFAADTVAGIGICAQRLPEMANTCLEFLLALTRQQLMTGEFGSVDGEADILIQAIMSIKSIIQQDPPSHEKVIIQLVRSLNSIKVPAARAIIVWMVGEYNSLGDLIPKMLATVLKYLAWCFTSEELETKLQICNTTVKVLLHAKGNDLLTIKKVLIYVLEMAKCDLNYDIRDRAHFLRKILSTYLDSRGLEEETNCLAQHKDSSCVLAECLFGGQNKPMSREPIDHRFYLPGSLSQIVLHAAPGYEPLPKPCSLRCDCLKMNEFG----EGVTNGDPYVTDNEDSVSEFLDEENASSYSSQHSDMDSSGSGGSEEAGSANEGDENSHPLIQFSDVGNA-------DEKKNIASQSASDFGELLSNRALESWLDEQPGFSSTNTSEQIQVRRSSARISIGDIGGQVKPKSYALLDPVNGNGLKVDYSFSSEISSISPLFLCIEVSFKNCSKETVSDITLVDEESGKGMDSVDQASGSRESSTIPENNEPN-LVSVEEIASLEPGHAMTRTVQVRFHHHLLPLKLTLYCNGKRHPVKLRPDIGYFVKALPMDVEAFTKKESHLRGMFECVRRCTFTDHIKELDKDKGDNSLVEDKFLVICQNLALKMLSSVNLHLVSVDLPVAANLDDATGLCLRFSSKLLSTSVPCLITITVEGRCSEPLEMSVKVNCEETVFGLNLLNRIVNVLVEP 1131
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4E9J4 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1481.46 bits (3834), Expect = 0.000e+0
Identity = 758/1144 (66.26%), Postives = 905/1144 (79.11%), Query Frame = 0
Match: A0A5E4E9J4 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1481.46 bits (3834), Expect = 0.000e+0
Identity = 758/1144 (66.26%), Postives = 905/1144 (79.11%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKN-DDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLT---IGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1137
MF QFGATAD+LSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGF+V N+FPQVVKNVAS SLEVKKLVYLYLLHYA+KRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHV+AP+V+VA KCARDPSVYVRKCAANALPKLHDLRL+ENT GIEEI+GILLND+SP VVGAAAAAF+SVCPNNL LIG +YK+LCE LPDVEEWG+I+LI ILLRY+IAR GLV+ESIM S +S E SE D D + A+ E+ +S G YQS+L + S+ Y+EGP ++LS+++ +K A + +FTS KN DDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAP EDL+RIVKPLLF+LRSS+AS YV LCN+QVFAKA+PSLF+ Y EDFFICSSD+YQIKALKL+IL+ IAT+SSI I +EFQDY+RD DRRFAADTVA IG+CAQRLP +ANTCLE LLALT Q + + S G++ +LIQAI+SI+SII+ DPP HEKVI+ LVR+L+SIKVP ARA+++ M+GEYNS G ++PKML +VL YLA CFT E LETKLQI VKV+L A+G+DL KK+L YVLELAKCD+NYDIRDRA +RK+L+ YL S L EE + + K+ SC+LAE LF + K M EP ++RFYLPGSLSQIVLHAAPGY PLP+PCSL + + FG +G T+ D Y D+ + S D+++ SS S+ S+ SSG+ +E+GSASEGDEN+ LI FSDVGNA N + N +DFGEL+SNRALESWLDE P SS N E S + SSARIS+G + ++KPKSY LLD VNGNGL+ DY FSSE+SS S F+C+EVSFKNCS E I L DE+ G D+ +QA + ESS+ P NN+ +V VEEI LEPGQ+ + ++V FHHHLLP+KL L C+G + PVKL PDIGYFVK LPMD E F +KES LRGMFE RRCTF DH++EL +KG+ SLV+DKFLV+C L LKMLS+ANL L+SVD+PV N DD +GLC+RF+ ++LS S PCLIT+T+ G CSEPL +VKVNCEETVFGLNLLN+IV+ L EP
Sbjct: 1 MFPQFGATADTLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFEVPNFFPQVVKNVASHSLEVKKLVYLYLLHYAQKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLVLVAAGKCARDPSVYVRKCAANALPKLHDLRLDENTAGIEEIIGILLNDHSPCVVGAAAAAFSSVCPNNLALIGSNYKRLCEILPDVEEWGKIILIGILLRYIIARHGLVKESIMFSLHSTENSQSEKDCSDTNSALVEDNGDMS-GRYQSELANIVSRCYIEGPAEHLSRLSLMNKDASECNYARFTSGKNNDDVKILLQCTSPLLWSNNSAVVLAAAGVHWIMAPIEDLKRIVKPLLFVLRSSNASKYVVLCNVQVFAKAIPSLFSLYFEDFFICSSDSYQIKALKLDILAYIATDSSISFILKEFQDYIRDPDRRFAADTVAGIGICAQRLPEMANTCLEFLLALTRQQLMTGEFGSLDGEADILIQAIMSIKSIIQQDPPSHEKVIIQLVRSLNSIKVPAARAIIVWMVGEYNSLGDLIPKMLATVLKYLAWCFTSEELETKLQICNTTVKVLLHAKGNDLLTIKKVLIYVLELAKCDLNYDIRDRAHFLRKILSTYLDSRGLEEETNCLGQHKDSSCVLAEYLFGGQKKPMPHEPIDHRFYLPGSLSQIVLHAAPGYEPLPKPCSLRCDGLKMNEFG----EGVTNGDPYVTDNEDSESEFLDEENASSYSSQHSDMDSSGSGGSEEAGSASEGDENSHPLIQFSDVGNA-------NEKKNIASQSASDFGELLSNRALESWLDEQPGFSSTNTSEQSQVRRSSARISIGDIGGQIKPKSYALLDPVNGNGLKADYSFSSEISSISPLFLCIEVSFKNCSKEIISDITLVDEESGKGMDSVDQASGSRESSTTPENNEPN-LVSVEEIASLEPGQAMTRTVQVRFHHHLLPLKLTLYCNGKRHPVKLRPDIGYFVKALPMDVEAFTKKESHLRGMFECVRRCTFTDHIKELDKDKGDNSLVEDKFLVICRNLALKMLSSANLHLVSVDLPVAANLDDATGLCIRFSSKLLSTSAPCLITITVEGRCSEPLEMSVKVNCEETVFGLNLLNRIVNVLVEP 1131
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251QKX6 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1479.54 bits (3829), Expect = 0.000e+0
Identity = 760/1144 (66.43%), Postives = 906/1144 (79.20%), Query Frame = 0
Match: A0A251QKX6 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1479.54 bits (3829), Expect = 0.000e+0
Identity = 760/1144 (66.43%), Postives = 906/1144 (79.20%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLT---IGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1137
MF QFGATAD+LSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGF+VSN+FPQVVKNVASQSLEVKKLVYLYLLHYA+KRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHV+AP+V+VA KCARDPSVYVRKCAANALPKLHDLRL+ENT GIEEI+GILLND+SP VVGAAAAAF+SVCPNNL LIGR+YK+LCE LPDVEEWG+I+LI ILLRY+IAR GLV+ESIM S +S E SE D D + A+ E+ +S G YQS+L + S+ Y+EGP ++LS+++ +K A + FTS K NDDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAP EDL+RIVKPLLF+LRSS+AS YV LCN+QVFAKA+PSLF+ Y EDFFICSSD+YQIKALKL+IL+ IAT+SSI I +EFQDY+RD DRRFAADTVA IG+CAQRLP +ANTCLE LLALT Q + + S G++ +LIQAI+SI+SII+ DPP HEK LVR+L+SIKVP ARA+++ M+GEYNS G ++PKML +VL YLA CFT E LETKLQI VKV+L A+G+DL KK+L YVLELAKCD+NYDIRDRA +RK+L+ YL S L EE +++ K+ SC+LAE LF + K M EP ++RFYLPGSLSQIVLHAAPGY PLP+PCSL + + FG +G T+ D Y D+ + S D+++ SS S+ S+ SSG+ +E+GSASEGDEN+ LI FSDVGNA N + N +DFGEL+SNRALESWLDE P SS N E S + SSARIS+G + ++KPKSY LLD VNGNGL+ DY FSSE+SS S F+C+EVSFKNCS E I L DE+ G D+ +QA + ESS+ P NN+ +V VEEI LEPGQ+ + ++V FHHHLLP+KL L C+G + PVKL PDIGYFVK LPMD E F +KES LRGMFE RRCTF DH++EL +KG+ SLV+DKFLV+C L LKMLS+ANL L+SVD+PV N DD +GLCLRF+ ++LS S PCLIT+T++G CSEPL +VKVNCEETVFGLNLLN+IV+ L EP
Sbjct: 1 MFPQFGATADTLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFEVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAQKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLVLVAAGKCARDPSVYVRKCAANALPKLHDLRLDENTAGIEEIIGILLNDHSPCVVGAAAAAFSSVCPNNLALIGRNYKRLCEILPDVEEWGKIILIGILLRYIIARHGLVKESIMFSLHSTENSQSEKDCSDTNSALVEDNGDMS-GRYQSELANIVSRCYIEGPAEHLSRLSLMNKDASECNYASFTSGKNNDDVKILLQCTSPLLWSNNSAVVLAAAGVHWIMAPIEDLKRIVKPLLFVLRSSNASKYVVLCNVQVFAKAIPSLFSLYFEDFFICSSDSYQIKALKLDILAYIATDSSISFILKEFQDYIRDPDRRFAADTVAGIGICAQRLPEMANTCLEFLLALTRQQLMTGEFGSVDGEADILIQAIMSIKSIIQQDPPSHEK----LVRSLNSIKVPAARAIIVWMVGEYNSLGDLIPKMLATVLKYLAWCFTSEELETKLQICNTTVKVLLHAKGNDLLTIKKVLIYVLELAKCDLNYDIRDRAHFLRKILSTYLDSRGLEEETNCLAQHKDSSCVLAEYLFGGQKKPMPHEPIDHRFYLPGSLSQIVLHAAPGYEPLPKPCSLRCDGLKMNEFG----EGVTNGDPYVTDNEDSESEFLDEENASSYSSQHSDMDSSGSGGSEEAGSASEGDENSHPLIQFSDVGNA-------NEKKNIASQSASDFGELLSNRALESWLDEQPGFSSTNTSEQSQVRRSSARISIGDIGGQIKPKSYALLDPVNGNGLKADYSFSSEISSISPLFLCIEVSFKNCSKEIVSDITLVDEESGKGMDSVDQASGSRESSTTPENNEPN-LVSVEEIASLEPGQAMTRTVQVRFHHHLLPLKLTLYCNGKRHPVKLRPDIGYFVKALPMDVEAFTKKESHLRGMFECVRRCTFTDHIKELDKDKGDDSLVEDKFLVICRNLALKMLSSANLHLVSVDLPVAANLDDATGLCLRFSSKLLSTSAPCLITITVQGRCSEPLEMSVKVNCEETVFGLNLLNRIVNVLVEP 1127
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5S9X5 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1470.29 bits (3805), Expect = 0.000e+0
Identity = 763/1147 (66.52%), Postives = 912/1147 (79.51%), Query Frame = 0
Match: A0A6P5S9X5 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1470.29 bits (3805), Expect = 0.000e+0
Identity = 763/1147 (66.52%), Postives = 912/1147 (79.51%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASPYS-EYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAKN-DDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLT---IGDSSFGSNIVKGGTHSDLYGVDDSERASGSSDDD---SNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPD-SSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEP 1137
MF QFGATAD+LSKAST+VFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGF+VSN+FPQVVKNVASQSLEVKKLVYLYLLHYA+KRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHV+AP+V+VA KCARDPSVYVRKCAANALPKLHDLRL+ENT GIEEI+GILLND+SP VVGAAAAAF+SVCPNNL+LIGR+YK+LCE LPDVEEWG+I+LI ILLRY IAR GLV+ESIM S +S E SE D D + A+ E++ +S G YQS+L + S+ Y+EGP +YLS+++ +K A + +FTS KN DDVKILLQCTSPLLWS+NSAV+LAAAG+HWIMAP EDL+RIVKPLLF+LRSS+AS YV LCN+QVFAKA+PSLF+ Y EDFFICSSD+YQIKALKL+IL+ IAT+SSI I +EFQDY+RD DRRFAADTVA IG+CAQRLP +ANTCLE LLALT Q + + S G++ +LIQAI+SI+SII+ DPP HEKVI+ LVR+L+SIKVP ARA+++ M+GEYNS G ++PKML +VL YLA CFT E LETKLQI VKV+L A+G+DL KK+L YVLE+AKCD+NYDIRDRA +RK+L+ YL S L EE +++ K+ SC+LAE LF + K MS EP ++RFYLPGSLSQIVLHAAPGY PLP+PCSL + + FG +G T+ D Y D+ + S D++ S SS S++ +GS G+ +E+GSA+EGDEN+ LI FSDVGNA N + N +DFGEL+SNRALESWLDE P SS N E + SSARIS+G + +VKPKSY LLD VNGNGL+VDY FSSE+SS S F+C+EVSFKNCS E I L DE+ G D+ +QA + ESS+ P NN+ +V VEEI LEPGQ+ + ++V FHHHLLP+KL L C+G + PVKL PDIGYFVK LPMD E F +KES LRGMFE RRCTF DH++EL +KG+ SLV+DKFLV+C L LKMLS+ANL L+SVD+PV N DD +GLCLRF+ ++LS S+PCLIT+T+ G CSEPL +VKVNCEETVFGLNLLN+IV+ L EP
Sbjct: 1 MFPQFGATADTLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFEVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAQKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLVLVAAGKCARDPSVYVRKCAANALPKLHDLRLDENTAGIEEIIGILLNDHSPCVVGAAAAAFSSVCPNNLSLIGRNYKRLCEILPDVEEWGKIILIGILLRYTIARHGLVKESIMFSLHSTENSQSEKDCSDTNSALVEDSGDMS-GRYQSELANIVSRCYIEGPAEYLSRLSLMNKDASECNYARFTSGKNNDDVKILLQCTSPLLWSNNSAVVLAAAGVHWIMAPIEDLKRIVKPLLFVLRSSNASKYVVLCNVQVFAKAIPSLFSLYFEDFFICSSDSYQIKALKLDILAYIATDSSISFILKEFQDYIRDPDRRFAADTVAGIGICAQRLPEMANTCLEFLLALTRQQLMTGEFGSVDGEADILIQAIMSIKSIIQQDPPSHEKVIIQLVRSLNSIKVPAARAIIVWMVGEYNSLGDLIPKMLATVLKYLAWCFTSEELETKLQICNTTVKVLLHAKGNDLLTIKKVLIYVLEMAKCDLNYDIRDRAHFLRKILSTYLDSRGLEEETNCLAQHKDSSCVLAECLFRGQKKPMSREPIDHRFYLPGSLSQIVLHAAPGYEPLPKPCSLRCDGLKMNEFG----EGVTNGDPYVTDNEDSESEFLDEENASSYSSQHSDMDSSGSGGSGGSEEAGSANEGDENSHPLIQFSDVGNA-------NEKKNIASQSASDFGELLSNRALESWLDEQPGFSSTNTSEQIQVRRSSARISIGDIGGQVKPKSYALLDPVNGNGLKVDYSFSSEISSISPLFLCIEVSFKNCSKETVSDITLVDEESGKGVDSVDQASGSRESSTTPENNEPN-LVSVEEIASLEPGQAMTRTIQVRFHHHLLPLKLTLYCNGKRHPVKLRPDIGYFVKALPMDVEAFTKKESHLRGMFECVRRCTFTDHIKELDKDKGDNSLVEDKFLVICRNLALKMLSSANLHLVSVDLPVAANLDDATGLCLRFSSKLLSTSVPCLITITVEGRCSEPLEMSVKVNCEETVFGLNLLNRIVNVLVEP 1134
BLAST of XM_017367587.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0E7A3 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1468.75 bits (3801), Expect = 0.000e+0
Identity = 778/1154 (67.42%), Postives = 911/1154 (78.94%), Query Frame = 0
Match: A0A7J0E7A3 (AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR037096})
HSP 1 Score: 1468.75 bits (3801), Expect = 0.000e+0
Identity = 778/1154 (67.42%), Postives = 911/1154 (78.94%), Query Frame = 0
Query: 1 MFHQFGATADSLSKASTLVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDPNPLVRAWALRTMAGIRLHVVAPIVVVAVAKCARDPSVYVRKCAANALPKLHDLRLEENTGGIEEIVGILLNDNSPSVVGAAAAAFASVCPNNLNLIGRHYKKLCETLPDVEEWGQIVLIEILLRYVIARQGLVRESIMASP------YSEYLDSEIDGPDRDFAVKEETNVVSIGAYQSQLLQMASKSYLEGPEKYLSQMNFEDKGAFQSGLPKFTSAK-NDDVKILLQCTSPLLWSHNSAVILAAAGLHWIMAPKEDLRRIVKPLLFILRSSSASAYVALCNIQVFAKAMPSLFASYSEDFFICSSDTYQIKALKLEILSNIATESSIPVIFQEFQDYVRDSDRRFAADTVAAIGLCAQRLPNVANTCLEGLLALTIPQSLNNDTESSGGDSIVLIQAIISIRSIIKLDPPRHEKVIVHLVRTLDSIKVPTARAMVIRMMGEYNSSGHILPKMLTSVLTYLACCFTKEALETKLQILYAAVKVVLCARGDDLCASKKLLSYVLELAKCDINYDIRDRARVIRKLLTQYLFSFELVEEARYISESKNMSCLLAERLFLEKPKSMSTEPNNYRFYLPGSLSQIVLHAAPGYNPLPEPCSLTIGDSSFGSNIVK-------GGTHSDLYGVDDSERASGSSDDDSNSSDGSEISEAGSSGNDVGDESGSASEGDENTGLLINFSDVGNAAYANLNGNSEVNDPQSRPNDFGELMSNRALESWLDESPDSSRNAPESSSFQNSSARISVGSLSERVKPKSYTLLDTVNGNGLRVDYVFSSEMSSKSK-FVCLEVSFKNCSNEPKEKILLFDEDIEGGQDNSEQALRTNESSSAPHNNDVKVIVPVEEIPCLEPGQSSKKIMEVHFHHHLLPIKLVLRCSGLKLPVKLWPDIGYFVKPLPMDDEEFFRKESQLRGMFEYNRRCTFIDHVRELKDEKGEISLVKDKFLVVCETLGLKMLSNANLSLISVDMPVTTNHDDVSGLCLRFACEILSNSMPCLITVTLRGNCSEPLNTTVKVNCEETVFGLNLLNKIVSFLAEPPL 1139
MF QFGATAD+LSKAST+VFRIGTDAHLYDDP+DV+I+ LLDSKFDSEKCEALKRLLALIAQGFDVSN+FPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSIN FQKDLGDPNPLVRA ALR MAGIRLHV++PIV+VAV KCARDPSVYVRKCAANALPKL+DL LEENT IEEIVGILLNDNSP VVGAAAAAFASVCPNNL+LI R+Y++LCETLPDVE+WGQIVLI +LLRYVIAR GL +ESIM S SE SE DG D +F +KE Y+S+L ++ S+SYLEGPE YLS+ + DKG+F FTSAK N DVKILLQCTSPLLWSHNSAV+LAAAG HWIMAPKED++RIVKPLLF+LRSS+AS YV LCNIQVFAK MP +F+ Y EDFFICSSD+YQIKALKLEILS+IAT+SSI VIFQEFQDYVRD DRRFAADTVAAIGLC +RLP V++ CL LLALT +SLN+D S GG+ VL+QA+ISI++II LDPP HEKVIV LVR+L+ IKVP ARAM+ M+GEYNS G I+P ML +VL YLA CFT EALE KLQIL AVKV+LC++G+D+ +++LSYVLELA CD++YD+RDRARV++KLL+ + S +L EA+ + E+K++ ++A+ LF EP NYRFYLPGSLS IVLHAAPGY PLP PCSL+I + N V+ G T SD YGVD S+ SGS D + N+SD S SG G+ESGS SE D+N LINFSDV NA AN NG S+ N+ SR +DF ELMS ++L+SWLDE P S+++ E + Q SSARIS+G + RVK KS+ LLD V GNGL VDY FSSE+SS S VC+EVSF NCS EP K+LL DE+ G D++E AL T+ES + DV ++VP+E+I L+ Q+ ++I++V FHHHLLP+KLVL C+G K PVKL PDIG+FVKPLPMD E F KESQL GMFEY R CTF DH+ ELK+E+ + SL+KDKFLV+CE+L LKMLSNANL L+SVDMPV N DD SGL LRF+ EILSNS+PCLIT T+ G CSEPL +VKVNCEETVFGLNLLN+IV+FLAEP L
Sbjct: 1 MFPQFGATADTLSKASTMVFRIGTDAHLYDDPEDVNISLLLDSKFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINSFQKDLGDPNPLVRALALRAMAGIRLHVISPIVLVAVGKCARDPSVYVRKCAANALPKLYDLHLEENTTTIEEIVGILLNDNSPGVVGAAAAAFASVCPNNLSLIERNYRRLCETLPDVEDWGQIVLIGVLLRYVIARHGLAKESIMLSSCATVSYRSENDGSENDGSDTNFELKENGKDKGCDVYESELPEIVSRSYLEGPENYLSRSSHADKGSFGLDFSCFTSAKSNYDVKILLQCTSPLLWSHNSAVVLAAAGFHWIMAPKEDVKRIVKPLLFVLRSSNASKYVVLCNIQVFAKVMPYVFSPYYEDFFICSSDSYQIKALKLEILSSIATDSSILVIFQEFQDYVRDPDRRFAADTVAAIGLCVRRLPKVSDMCLGWLLALTRQESLNSDIGSVGGEDGVLVQALISIKAIINLDPPCHEKVIVQLVRSLELIKVPAARAMIFWMVGEYNSIGGIIPLMLPTVLKYLAWCFTSEALEAKLQILNTAVKVLLCSKGEDMWTFRRILSYVLELAICDLSYDVRDRARVLKKLLSPLIVSHDLEVEAKGLPENKDLKIVVAD-LFFRGQSKPCPEPINYRFYLPGSLSHIVLHAAPGYEPLPYPCSLSIDELGHDFNDVQGIEALREGPTGSDSYGVDGSDTVSGSLDGE-NTSDYSSEYSITGSGGSGGEESGSVSESDDNADPLINFSDVSNAC-ANQNGGSQDNNAPSRIDDFEELMSKKSLDSWLDEHP--SQSSSELTHIQRSSARISLGHIGGRVKLKSHKLLDPVIGNGLSVDYTFSSEISSVSPLLVCVEVSFTNCSTEPMSKLLLVDEESSKGIDSAEAALATSESPLT-SDKDVPILVPLEDINSLDASQTIRRILQVRFHHHLLPLKLVLWCNGKKHPVKLRPDIGFFVKPLPMDIEMFTSKESQLPGMFEYTRSCTFTDHIGELKNEQCDSSLIKDKFLVICESLALKMLSNANLFLVSVDMPVAANLDDASGLRLRFSSEILSNSIPCLITATVEGKCSEPLTLSVKVNCEETVFGLNLLNRIVNFLAEPIL 1148
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZNG9 | E-Value: 0.000e+0, PID: 70.54 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A5J5BEB8 | E-Value: 0.000e+0, PID: 69.74 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A7J7H4D6 | E-Value: 0.000e+0, PID: 67.35 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A2R6RRF3 | E-Value: 0.000e+0, PID: 68.32 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| M5X762 | E-Value: 0.000e+0, PID: 66.61 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A314Y7E0 | E-Value: 0.000e+0, PID: 66.43 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A5E4E9J4 | E-Value: 0.000e+0, PID: 66.26 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A251QKX6 | E-Value: 0.000e+0, PID: 66.43 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A6P5S9X5 | E-Value: 0.000e+0, PID: 66.52 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
| A0A7J0E7A3 | E-Value: 0.000e+0, PID: 67.42 | AP-3 complex subunit beta {ECO:0000256|PIRNR:PIRNR... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |