Resource Type:
Polypeptide
Name:
XM_017366922.1
Identifier:
XM_017366922.1-protein
Sequence:
MITDSYSKMMSDIGMRSMMQNEDLGFMLRNQEISDRERDREIDLSMYRSG
SAPPTVEGSLNAVGGLLSGGGSGVSEEEIRSDPAYISYYYANVNMNPRLP
PPLLSKEDGRFAQRMQGAGSSAAIGDRRKIGREDGGDGSRSLFSVQMEKG
QQQGSNGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRP
TSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVS
HTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGRSSLDLQNVNGSIS
FNGASGRVSQQADLVAALSEITLSNNLLDEENHARSRIQQEIDDHQNLFH
LQGDQYNNKQHPYLNRSEPGHLQSISQSGKGSYGYGVRAELNNSSLLSDV
QVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLN
GHNINPGSPSMLGNQFASGSLPPLFENVAAATAMGDSRRMGGLALGPNLI
AAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAGEGLNNYMD
LAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLGMSYPGS
PLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGML
DETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETAT
SEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGH
VLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVI
QKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQ
VVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMS
QQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYV
VQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERR
IGVLASYSAAAAAAAAAAT
Sequence Length:
1019
Sequence Checksum:
800c803e2adcbddfb4dd28280367696b
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017366922.1, derives from mRNA, XM_017366922.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZNN8 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1454.11 bits (3763), Expect = 0.000e+0
Identity = 786/1065 (73.80%), Postives = 885/1065 (83.10%), Query Frame = 0
Match: A0A5B6ZNN8 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1454.11 bits (3763), Expect = 0.000e+0
Identity = 786/1065 (73.80%), Postives = 885/1065 (83.10%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQNED----LGFMLRNQ---EISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLLSGGGSG------VSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG---DRRKIGR--EDGGDGSRSLFSVQM-----------EKGQQQGSNGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGRS-SLDLQNVNGSISFNGASGRVSQQADLVAALSEITLS-NNLLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPGH--LQSISQSGKGSY-----GYGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAA------------GEGLNN-YMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
MITDSYSKMMSDIGMRSM+Q+ D LG +LR Q E+SDRER+ LS+YRSGSAPPTVEGSLNAVGGL GG G VSE+E+RSDP+YISYYY+NVN+NPRLPPPLLSKED RFAQR+QG G S+A+G DRRK+ R +DGG+ +RSLFS+ + E + QG+ EW GDGLIGLPGLGLG RQKSIAE+IQDD +H TS S HPSRP SRNAFD+ ++ SESHFA ++LAS+DA+H+ ANIQG+ S QN+ SS SHTYA+ALG SLSRSTTPDPQL RAPSPRI GGR+ S+D ++VNG SFNGAS + + DLVAALS +TLS N+++DEENH+RSR+Q EIDDHQNLFHLQG+Q KQHPYLN+SE GH L S SQS KGSY V +LNNSSL+++ QV LHKP+++SANSYLKGPSTP NS GSSP Y+N+ SPNSSF NYGL+G+ IN SPSM+GN +G+ PPLFENVAAA+AMG DSR +GG LALGPNL+AAAAELQNLSR GN + + LQVPL+DPLYLQYL+S E+AA GE L+N YMDL G QKAYLG +LSP KSQYGLPYLG SL HG+YGN A+GLGMSYPGSPL G LLPNSP G GSP+ HG+R++RFP G+RN GGVMG WH EAGG LDE+F SSLLDEFK+NK +CFELSEIAGHVVEFSADQYGSRFIQQKLETAT EEKNMVF EI PQAL+LMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVLNLSLQMYGCRVIQKAIEVVDLDQQT+MVAELDGHIMRCVRDQNGNHVIQKCIECIP+DAIQFI+S+FYDQVV LSTHPYGCRVIQRVLEHCSD KTQ++VMDEI++SVCMLAQDQYGNYVVQHVLEHGKPHER+ IINKLIG+IVQMSQQKFASNVVEKCLTFGTP ERQ LV+EMLG+TDENEPLQAMMKDQFANYVVQKVLETCDDQQLEL+LNRIKVHLNALKKYTYGKHIVARVEKLV AGERRIGVL+SYSA
Sbjct: 1 MITDSYSKMMSDIGMRSMLQSNDYGDELGLLLREQRRQEVSDRERE----LSLYRSGSAPPTVEGSLNAVGGLFGHGGGGGADFGGVSEDELRSDPSYISYYYSNVNLNPRLPPPLLSKEDWRFAQRLQGGGGSSALGGNGDRRKMNRGADDGGN-NRSLFSMPLGFNGKNEENGVESRKSQGA-AEWGGDGLIGLPGLGLGSRQKSIAEIIQDDISHATSVSRHPSRPASRNAFDDSIDSSESHFAHLHRELASMDALHSGANIQGMPSVQNIGSSASHTYASALGGSLSRSTTPDPQLAVRAPSPRILPIGGGRAGSMDKRSVNGPNSFNGASPGMGEPTDLVAALSGMTLSTNDMVDEENHSRSRVQHEIDDHQNLFHLQGNQ---KQHPYLNKSESGHFHLHSSSQSAKGSYPNMGKSSVVGMDLNNSSLIANGQVELHKPAVSSANSYLKGPSTPILNSRGSSPPNYQNLDSPNSSFSNYGLSGYAINSASPSMMGNH--NGNFPPLFENVAAASAMGVFGMDSRALGGGLALGPNLMAAAAELQNLSRVGNHSVGSALQVPLMDPLYLQYLRSTEYAAAQVAVLNDPSMDGECLSNSYMDLIGHQKAYLGSLLSPQKSQYGLPYLGKSGSLNHGFYGNPAFGLGMSYPGSPLAGPLLPNSPIGLGSPVIHGERNMRFPPGMRNLAGGVMGSWHSEAGGNLDESFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATIEEKNMVFHEIMPQALTLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLNLSLQMYGCRVIQKAIEVVDLDQQTRMVAELDGHIMRCVRDQNGNHVIQKCIECIPQDAIQFIVSVFYDQVVILSTHPYGCRVIQRVLEHCSDAKTQRIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIINKLIGEIVQMSQQKFASNVVEKCLTFGTPAERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELLLNRIKVHLNALKKYTYGKHIVARVEKLVVAGERRIGVLSSYSA 1054
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BA14 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1437.17 bits (3719), Expect = 0.000e+0
Identity = 776/1087 (71.39%), Postives = 881/1087 (81.05%), Query Frame = 0
Match: A0A5J5BA14 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1437.17 bits (3719), Expect = 0.000e+0
Identity = 776/1087 (71.39%), Postives = 881/1087 (81.05%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQN----EDLGFMLRNQ---EISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLLSGGGS------GVSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG---DRRKIGR--EDGGDGSRSLFSVQMEKGQQQGSNG----------EWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGR-SSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLS-NNLLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSY-----GYGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAA-----------GEGLNN-YMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKA------------------------IEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
MITD YSKM++DIGMRSM+Q+ EDLG +LR Q E+SDRER+ L++YRSGSAPPTVEGSL+AVGGL G GVSEE++RSDPAY+SYYY+NVN+NPRLPPPLLSKED RFAQR+QG+ S+A G DRRK+ R +DGG+ S SLFS+Q+ ++ NG EW GDGLIGLPGLGLG RQKSIAE+IQDD H TS S HPSRP SRNAFD+ ++ SESHF+ +L S+DA+H+ ANIQG+SS N+ SS SHTYA+ALGASLSRSTTPDPQL RAPSPRIP GGR S+D +++NG SFNG S + + ADLVAALS +TLS N+++DEE+H+RSR+Q EIDDHQNLFHLQG+Q KQHPYLN+SE G HL S SQS +GSY GV +LNNSSL+++ V L++P+++SANS LKGP TP NSGGSSP Y+++ SPNSSF NYGL+G+ INP SPSM+GN +G+LPPLFENVAAA+AMG DSR +GG LALGPN++AAAAELQ+LSR GN NA + LQVPL+DPLYLQYL+SNE+AA GE ++N YMDL G+QKAYLG +LSP KSQ+GLPYLG SL HG+YGN A+G+GM YPGSPL G LLPNSP G GSP+ G+R++RFP G+RN G VMG WH EAGG LDE+F SSLLDEFK+NK RCFELSEIAGHVVEFSADQYGSRFIQQKLETAT+EEKNMVF EI QAL+LMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVLNLSLQMYGCRVIQKA IEVVDLDQQTKMVAELDGH+MRCVRDQNGNHVIQKCIECIP+DAIQFI+S+FYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQ +VMDEI+RSVCMLAQDQYGNYVVQHVLEHGKPHERT IINKLIGQIVQMSQQKFASNVVEKCLTFGTP ERQ LV EMLG+TDENEPLQ MMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVL+SYSA
Sbjct: 1 MITDGYSKMITDIGMRSMLQSNDYGEDLGLLLREQRRQEVSDRERE----LNLYRSGSAPPTVEGSLSAVGGLYGHSGGGAIDFGGVSEEDLRSDPAYVSYYYSNVNLNPRLPPPLLSKEDWRFAQRLQGSSGSSASGGIGDRRKVNRGGDDGGNNS-SLFSMQLGFNGKKEENGIELRKPQGVAEWGGDGLIGLPGLGLGSRQKSIAEIIQDDLNHATSLSRHPSRPASRNAFDDSIDSSESHFSHLHHELTSMDALHSGANIQGMSSVPNIGSSASHTYASALGASLSRSTTPDPQLAVRAPSPRIPPVGGGRVGSMDKRSINGPNSFNGVSPGMGEPADLVAALSGMTLSTNDMVDEEHHSRSRVQHEIDDHQNLFHLQGNQ---KQHPYLNKSESGYFHLHSASQSARGSYPNLGKSSGVGMDLNNSSLIANGHVELNRPAVSSANSCLKGPLTPILNSGGSSPPNYQHLDSPNSSFSNYGLSGYAINPASPSMMGNH--NGNLPPLFENVAAASAMGVSGMDSRALGGGLALGPNIMAAAAELQSLSRVGNHNAGSALQVPLMDPLYLQYLRSNEYAAQVAALNDPSMDGECISNSYMDLIGLQKAYLGSLLSPQKSQFGLPYLGKSGSLNHGFYGNPAFGIGMPYPGSPLAGPLLPNSPIGSGSPVGLGERNMRFPPGMRNLAGAVMGSWHSEAGGNLDESFPSSLLDEFKSNKTRCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFHEIMHQALTLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLNLSLQMYGCRVIQKAKQHYQICTEVVWKILEAAGFRKMAIEVVDLDQQTKMVAELDGHVMRCVRDQNGNHVIQKCIECIPQDAIQFIVSVFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQHLVMDEILRSVCMLAQDQYGNYVVQHVLEHGKPHERTAIINKLIGQIVQMSQQKFASNVVEKCLTFGTPAERQILVTEMLGSTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLSSYSA 1077
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DFK4 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1412.9 bits (3656), Expect = 0.000e+0
Identity = 775/1060 (73.11%), Postives = 861/1060 (81.23%), Query Frame = 0
Match: A0A4S4DFK4 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1412.9 bits (3656), Expect = 0.000e+0
Identity = 775/1060 (73.11%), Postives = 861/1060 (81.23%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQN----EDLGFMLRNQ---EISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLLSGGGSGV--------SEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG----DRRKIGREDGGDGSRSLFSVQ-----------MEKGQQQGSNGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGG-RSSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSYG-----YGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAA-TAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAG------------EGL-NNYMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHG-YYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRI 1001
MITDSYSKMMSDIGMRSM+Q+ E+LG +LR Q E++DRER+ S+YRSGSAPPTVEGSLNAVGGL GGG G SEEE+RSDPAYISYYY+NVN+NPRLPPPLLSKED RFAQRMQGA +S+ +G R+ G +RSLFS+Q +E + QG+ EW GDGLIGLPGLGLG RQKSIAE+IQDD +H TS S HPSRP SRNAFD+ VE SESHFA +LAS+DA+ + ANIQG+ + QN+ + SHTYA+ALGASLSRSTTPDPQL+AR IP GG SS+D +N+NG SFNG S +S+QADLVAALS +TLS N L+DEENH+RS IQQEIDDHQNLFHLQGDQ + KQHPYLN SE G HL S QS K SY G+ ELNNSSL++D QV LHKP ++SA+SYLKGPSTP NSGGSSPS Y N+ SPNSSF NYGLNG+++NPGSPSM+GNQ A+ LPPLFENVAAA +AMG DSR +GG LALGPN +AAAAELQNLSR GN +A + LQ+ L+DPLYLQYL+S E+AA EG+ N+YMDL G+QKAYLG +LS KSQYGL Y+G SL H YYGN +GLGMSYPGSPL SLLPNSP G GSP+RH +R++RFPS +RN GGVMG WHPEAGG LDE F SSLLDEFK+NK +CFELSEIAGHVVEFSADQYGSRFIQQKLETAT+EEKNMVF EI PQALSLMTDVFGNYVIQKFFEHGTA+QIRELADQL+GHVL LSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIP++AIQFIIS+FYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQ+VMDEI++SVC LAQDQYGNYVVQHVLEHGKPHER+ II KLIGQIVQMSQQKFASNVVEKCLTFGT ERQ LV EMLGTTDENEPLQ MMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAG I
Sbjct: 1 MITDSYSKMMSDIGMRSMLQSNDYSEELGLLLREQRRQEVNDRERET----SLYRSGSAPPTVEGSLNAVGGLFVGGGGGGGGVDFGGLSEEELRSDPAYISYYYSNVNLNPRLPPPLLSKEDWRFAQRMQGASASSGLGGIGDRRKVGRGGGDGGNNRSLFSMQPGFNGKKEENGIESRKPQGA-AEWGGDGLIGLPGLGLGTRQKSIAEVIQDDISHATSISRHPSRPASRNAFDDNVESSESHFAHLHHELASIDALRSGANIQGMPAVQNIGVAASHTYASALGASLSRSTTPDPQLVARGA---IPLVMGGMTSSIDKRNINGPNSFNGVSTGMSEQADLVAALSGMTLSTNGLIDEENHSRSLIQQEIDDHQNLFHLQGDQNHIKQHPYLNNSESGKFHLHSALQSAKASYSNVGKTSGIGMELNNSSLIADGQVELHKP-VSSASSYLKGPSTPILNSGGSSPSNYHNLDSPNSSFSNYGLNGYSVNPGSPSMMGNQLAN--LPPLFENVAAAASAMGVSGMDSRALGGGLALGPNFMAAAAELQNLSRVGNHSAGSALQMQLMDPLYLQYLRSTEYAAAQAAALNDPTIDREGIGNSYMDLIGLQKAYLGTLLSTQKSQYGLQYVGKSGSLNHNNYYGNPQFGLGMSYPGSPLASSLLPNSPIGSGSPVRHSERNIRFPSVMRNVAGGVMGSWHPEAGGTLDEHFVSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQLSGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPQEAIQFIISVFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQIVMDEILQSVCTLAQDQYGNYVVQHVLEHGKPHERSAIITKLIGQIVQMSQQKFASNVVEKCLTFGTAAERQHLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGGMHI 1049
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I5J6 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1410.97 bits (3651), Expect = 0.000e+0
Identity = 781/1112 (70.23%), Postives = 871/1112 (78.33%), Query Frame = 0
Match: A0A7J7I5J6 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1410.97 bits (3651), Expect = 0.000e+0
Identity = 781/1112 (70.23%), Postives = 871/1112 (78.33%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQN----EDLGFMLRNQ---EISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLLSGGGSGV---------SEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG----DRRKIGREDGGDGSRSLFSVQ-----------MEKGQQQGSNGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGG-RSSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSYG-----YGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAA-TAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAG------------EGL-NNYMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHG-YYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQ-------------------------------------------HVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
MITDSYSKMMSDIGMRSM+Q+ E+LG +LR Q E++DRER+ S+YRSGSAPPTVEGSLNAVGGL GGG G SEEE+RSDPAYISYYY+NVN+NPRLPPPLLSKED RFAQRMQGA +S+ +G R+ G +RSLFS+Q +E + QG+ EW GDGLIGLPGLGLG RQKSIAE+IQDD +H TS S HPSRP SRNAFD+ VE SESHFA +LAS+DA+ + ANIQG+ + QN+ + SHTYA+ALGASLSRSTTPDPQL+AR IP GG SS+D +N+NG SFNG S +S+QADLVAALS +TLS N L+DEENH+RS IQQEIDDHQNLFHLQGDQ + KQHPYLN SE G HL S QS K SY G+ +LN+SSL++D QV LHKP ++SA+SYLKGPSTP NSGGSSPS Y N+ SPNSSF NYGLNG+++NPGSPSM+GNQ A+ LPPLFENVAAA +AMG DSR +GG LALGPN +AAAAELQNLSR GN +A + LQ+ L+DPLYLQYL+S E+AA EG+ N+YMDL G+QKAYLG +LS KSQYGL Y+G SL H YYGN +GLGMSYPGSPL SLLPNSP G GSP+RH +R++RFPS +RN GGVMG WHPEAGG LDE F SSLLDEFK+NK +CFELSEIAGHVVEFSADQYGSRFIQQKLETAT+EEKNMVF EI PQALSLMTDVFGNYVIQKFFEHGTA+QIRELADQL+GHVL LSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIP++AIQFIIS+FYDQV+TLSTHPYGCRVIQRVLEHCSDPKTQQ+VMDEI++SVC LAQDQYGNYVVQ HVLEHGKPHER+ II KLIGQIVQMSQQKFASNVVEKCLTFGT ERQ LV EMLGTTDENEPLQ MMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIG L+SYSA
Sbjct: 1 MITDSYSKMMSDIGMRSMLQSNDYSEELGLLLREQRRQEVNDRERET----SLYRSGSAPPTVEGSLNAVGGLFVGGGGGGGGGVDFGGLSEEELRSDPAYISYYYSNVNLNPRLPPPLLSKEDWRFAQRMQGASASSGLGGIGDRRKVGRGGGDGGNNRSLFSMQPGFNGKKEENGIESRKPQGA-AEWGGDGLIGLPGLGLGTRQKSIAEVIQDDISHATSISRHPSRPASRNAFDDNVESSESHFAHLHHELASIDALRSGANIQGMPAVQNIGVAASHTYASALGASLSRSTTPDPQLVARGA---IPLVMGGMTSSIDKRNINGPNSFNGVSTGMSEQADLVAALSGMTLSTNGLIDEENHSRSLIQQEIDDHQNLFHLQGDQNHIKQHPYLNNSESGKFHLHSALQSAKASYSNVGKTSGIGMDLNSSSLIADGQVELHKP-VSSASSYLKGPSTPILNSGGSSPSNYHNLDSPNSSFSNYGLNGYSVNPGSPSMMGNQLAN--LPPLFENVAAAASAMGVSGMDSRALGGGLALGPNFMAAAAELQNLSRVGNHSAGSALQMQLMDPLYLQYLRSTEYAAAQAAALNDPTIDREGIGNSYMDLIGLQKAYLGTLLSTQKSQYGLQYVGKSGSLNHNNYYGNPQFGLGMSYPGSPLASSLLPNSPIGSGSPVRHSERNIRFPSVMRNVAGGVMGSWHPEAGGTLDEHFVSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQLSGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPQEAIQFIISVFYDQVLTLSTHPYGCRVIQRVLEHCSDPKTQQIVMDEILQSVCTLAQDQYGNYVVQVCFISCKLLTNYTCFCRFKLLCMLEQWVAFSKLGGSQFESLALHVLEHGKPHERSAIITKLIGQIVQMSQQKFASNVVEKCLTFGTAAERQHLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGALSSYSA 1101
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HNV5 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1410.2 bits (3649), Expect = 0.000e+0
Identity = 743/1057 (70.29%), Postives = 847/1057 (80.13%), Query Frame = 0
Match: F6HNV5 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303})
HSP 1 Score: 1410.2 bits (3649), Expect = 0.000e+0
Identity = 743/1057 (70.29%), Postives = 847/1057 (80.13%), Query Frame = 0
Query: 9 MMSDIGMRSMMQN----EDLGFMLRNQEISD-RERDREIDLSMYRSGSAPPTVEGSLNAVGGLLSGGGSG-----VSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG----------DRRKIGREDGGDGSRSLFSVQMEKGQQQGSNG---------EWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGR-SSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSY-----GYGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAGEGL-------------NNYMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
MMSDIGMRSM N EDLG ++R Q + DRE +LS+YRSGSAPPTVEGSL+AVGGL GGG G SEEE+R+DPAY++YYY+NVN+NPRLPPP LSKED RFAQR+ G G+ DRRK+GR G+GS SLF +Q Q+ NG EW GDGLIGLPGLGLG RQKS+AE+IQDD H TS S HPSRP SRNAFD+ VE SE+ F+ +LAS+DA+ + IQ +S+ QNV SS SHTYA+ALGASLSRSTTPDPQL+ARAPSPRIP+ GGR SS+D ++ NGS SFN + + ADLVAALS + LS N ++D ENH+RS+IQ EIDDH+NLF+LQGDQ + K H YLN+SE G HL S+ QS KGSY G GV +LN S+LL++ QV L K S +SANS+LKGPSTPT SGGS PS Y+NV + NSSF NYGL+G+ NP SPSM+G+Q SG++PPLFENVAAA+AMG DSR +GG L LGPNL+AAA+ELQNL R GN N LQVP+VDPLYLQYL+S E+AA +G+ ++YMDL G+QKAYLG +L+ KSQYG+PYLG SS+ HGYYGN +GLGMSYPGSPL G LLPNSP G GSP+RH +R++RFPSG+RN GGVMG WH EAGG LD+ F SSLLDEFK+NK +CFELSEI+GHVVEFSADQYGSRFIQQKLETAT+EEK+MVF EI PQALSLMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVL LSLQMYGCRVIQKAIEVVDLDQQTKMV ELDG++MRCVRDQNGNHVIQKCIECIP+D+IQFIIS FYDQVVTLSTHPYGCRVIQRVLEHC DPKTQ+++MDEI++SV MLAQDQYGNYVVQHVLEHGKPHER+ IIN+L GQIVQMSQQKFASNVVEKCLTFG P ERQ LV+EMLG+TDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGV +S A
Sbjct: 1 MMSDIGMRSMPGNAEYREDLGLLIREQRRQEVAASDREKELSIYRSGSAPPTVEGSLSAVGGLFGGGGDGSDTGFASEEELRADPAYVNYYYSNVNLNPRLPPPRLSKEDWRFAQRLHGGGAGGGGSGSSSSVGGIGDRRKVGRGGDGNGS-SLFLMQPGFNGQKDENGAESRKAQGVEWGGDGLIGLPGLGLGSRQKSLAEIIQDDIGHATSVSRHPSRPASRNAFDDNVETSEAQFSHLHHELASMDALRSGTKIQAISAVQNVASSASHTYASALGASLSRSTTPDPQLVARAPSPRIPTVGGGRTSSMDKRSGNGSNSFNSVPPGIGESADLVAALSGLNLSTNGMVDGENHSRSQIQHEIDDHKNLFNLQGDQNHIKHHSYLNKSESGNFHLHSVPQSAKGSYSNMGKGSGVGMDLNKSALLAEGQVELQKSSASSANSFLKGPSTPTLTSGGSLPSHYQNVDNVNSSFSNYGLSGYTFNPASPSMMGSQHGSGNMPPLFENVAAASAMGVTGMDSRALGGGLNLGPNLMAAASELQNL-RVGNHTTGNALQVPVVDPLYLQYLRSAEYAATQGVALNDPTMDREYMGSSYMDLLGLQKAYLGALLTSQKSQYGVPYLGKSSSMNHGYYGNPQFGLGMSYPGSPLAGPLLPNSPVGSGSPVRHNERNMRFPSGMRNLAGGVMGAWHSEAGGNLDDNFVSSLLDEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGNVMRCVRDQNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVQSSLPA 1055
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RRD0 ((Pumilio 2 like {ECO:0000313|EMBL:PSS32574.1}))
HSP 1 Score: 1398.65 bits (3619), Expect = 0.000e+0
Identity = 756/1057 (71.52%), Postives = 856/1057 (80.98%), Query Frame = 0
Match: A0A2R6RRD0 ((Pumilio 2 like {ECO:0000313|EMBL:PSS32574.1}))
HSP 1 Score: 1398.65 bits (3619), Expect = 0.000e+0
Identity = 756/1057 (71.52%), Postives = 856/1057 (80.98%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQNEDLGFML-RNQEISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLL-------SGGGSGVSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG---DRRKIGR--EDGGDGSRSLFSVQMEKGQQQGS-----NGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGR-SSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSYGY-----GVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAG------------EGLNN-YMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLG---MSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
MITDSYSKM SD GMRS++Q+ D G L QE SDRER+ LSMYRSGSAPPTVEGSL+AVGGL + GV EEE+RSDPAY+SYYYANVN+NPRLPPPLLSKED R AQR+QG G +G DRRK+ R +DGG +RSLFS+ E ++GS GEW GDGLIGL GLGLG R+KSIAE+IQDD + TS S HPSRP SRNAFD+GVE SESHFA +L S+DA+ + ANIQG+ + QN+ +S SHTYA+AL ASLSRSTTPDPQL+ARAPSPRIP GR SS+D +N NGS SFNG S +S+ ADLV ALS ++LS N ++DE+N RS IQQEID Q+ FHL+ DQ + KQH YLNRSE G HL S SQSGK Y GV +LNNS L +D QV+LHKP+++SANSYLKGPSTP NSGGSSPS Y N SPNSSF NYG +G+ +NP SPSM+GNQ A+ PPLFENV A+AMG DSR +GG LALGPN++A AELQN SRAGN NA + LQ+PL+DPLYLQYL++ E+AA EG+ N YMDL G+QKAYLG +LSP KSQYGLPYLG SL H YYGN ++GLG MSY GSPL G LLPNS G GSP+RHG+R++RF S +RN GGVMG WH E GG LD FASSLLDEFK+NK RCFELSEI+GHVVEFSADQYGSRFIQQKLETAT+EEK+MVF EI PQALSLMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVL LSLQMYGCRVIQKAIEVVDLDQQT+MVAELDG++MRCVRDQNGNHVIQKCIECIP++AI+FIIS+FYDQVVTLSTHPYGCRVIQRVLEHC+DPKTQ++VMDE+++SV MLAQDQYGNYVVQHVLEHGKPHER+ II KLIGQIVQMSQQKFASNV+EKCL+FGTP ERQ+LV+EMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIG+++SYSA
Sbjct: 1 MITDSYSKMFSDAGMRSVLQSNDYGEELGLWQEASDRERE----LSMYRSGSAPPTVEGSLSAVGGLFGGGSGGGTADFGGVPEEEMRSDPAYVSYYYANVNLNPRLPPPLLSKEDWRSAQRLQGTGGGLGLGGIGDRRKVSRGGDDGGK-NRSLFSMGPEFNGKKGSGIESSKGEWGGDGLIGLSGLGLGSRKKSIAEIIQDDISQATSVSRHPSRPASRNAFDDGVESSESHFAHLHHELTSMDALRSGANIQGIPAAQNIGTSTSHTYASALAASLSRSTTPDPQLVARAPSPRIPPVGAGRASSMDKRNGNGSNSFNGVSPSMSEPADLVTALSGMSLSTNGVVDEDNLTRSVIQQEIDYPQDPFHLRADQNHIKQHSYLNRSESGQFHLHSASQSGKALYSQAGKSGGVEVDLNNSFLTADGQVSLHKPAVSSANSYLKGPSTPILNSGGSSPSNYHNFDSPNSSFSNYGFSGYGVNPASPSMIGNQMAN--FPPLFENVVNASAMGVSGLDSRALGGDLALGPNVMAGGAELQNFSRAGNHNAGSALQMPLMDPLYLQYLRTTEYAAAQAAAFSDPTIDREGIGNAYMDLIGLQKAYLGSLLSPQKSQYGLPYLGKSGSLNHNYYGNPSFGLGINGMSYTGSPLVGPLLPNSHIGSGSPVRHGERNMRFSSSLRNLAGGVMGSWHSETGGNLDGHFASSLLDEFKSNKTRCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKSMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTRMVAELDGNVMRCVRDQNGNHVIQKCIECIPQEAIEFIISVFYDQVVTLSTHPYGCRVIQRVLEHCNDPKTQRIVMDEVLQSVIMLAQDQYGNYVVQHVLEHGKPHERSAIIIKLIGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGIISSYSA 1050
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZMA7 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303} (Fragment))
HSP 1 Score: 1395.56 bits (3611), Expect = 0.000e+0
Identity = 754/1028 (73.35%), Postives = 854/1028 (83.07%), Query Frame = 0
Match: A0A5B6ZMA7 (PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303} (Fragment))
HSP 1 Score: 1395.56 bits (3611), Expect = 0.000e+0
Identity = 754/1028 (73.35%), Postives = 854/1028 (83.07%), Query Frame = 0
Query: 32 EISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLLSGGGSG------VSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG---DRRKIGR--EDGGDGSRSLFSVQM-----------EKGQQQGSNGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGRS-SLDLQNVNGSISFNGASGRVSQQADLVAALSEITLS-NNLLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSY-----GYGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAGEGL-------------NNYMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFG-GGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
E+SDRER+ LS+YRSGSAPPTVEGSLNAVGGL GG G VSE+E+RSDP+YISYYY+NVN+NPRLPPPLLSKED RFAQR+QG G S+A+G DRRK+ R +DGG+ +RSLFS+ + E + QG+ EW GDGLIGLPGLGLG RQKSIAE+IQDD +H TS S HPSRP S NAFD+ V+ SESHF ++L S+DA+ + ANIQG+ S QN+ +S SHTYA+ALGASLSRSTTPDPQL+ARAPSPRI GGR+ S+D ++VNG SFNGAS + + DLVAALS +TLS N+++DEENH+RSR+Q EIDDHQNLFHLQGDQ KQHP+L+ SE G HL S SQS K SY GV +LNNS L++D QV LHKP+++SANSYLKGPSTPT NS GSSP Y+N+ SPN SF NYGL+G+ INP SP M+GN SG+LP FENVAAA+AMG DSR +GG LAL PNL+AAAAELQNLSR GN ++ + +QVPL+DPLYLQYL+S E+AA + N+YMDL G+QKAYLG + SP KSQYGLPYLG SL HG+YGN A+GLG+SYPGSPL L+PNSP G GSP+RHG+R++RFPSG+RN GGVMG WH EAGG LDE+F SSLLDEFK+NK +CFELSEIAGHVVEFSADQYGSRFIQQKLETAT EEKNMVF EI PQAL+LMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVLNLSLQMYGCRVIQKAIEVVDLDQQT+MVAELDGHIMRCVRDQNGNHVIQKCIECIP+DAIQFI+S+FYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQ +VMDEI+RS+CMLAQDQYGNYVVQHVLEHGKPHER+ IINKLIG+IVQMSQQKFASNVVEKCLTFGTP ERQ LV+EMLG+TDENEPLQAMMKDQFANYVVQKVLETCDDQQLEL+LNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVL+SYSA
Sbjct: 1 EVSDRERE----LSLYRSGSAPPTVEGSLNAVGGLFGHGGGGGADFGGVSEDELRSDPSYISYYYSNVNLNPRLPPPLLSKEDWRFAQRLQGGGGSSALGGNGDRRKMNRGADDGGN-NRSLFSMPLGFNGKNEENGVESRKSQGA-AEWGGDGLIGLPGLGLGSRQKSIAEIIQDDISHATSVSRHPSRPASHNAFDDTVDSSESHFTHLHRELESMDALRSGANIQGMPSVQNIGASASHTYASALGASLSRSTTPDPQLVARAPSPRILPIGGGRAGSMDKRSVNGPNSFNGASPGMGEPTDLVAALSGMTLSTNDMVDEENHSRSRVQHEIDDHQNLFHLQGDQ---KQHPFLHNSESGQLHLHSASQSAKRSYPNMGKSSGVGMDLNNSFLIADGQVELHKPAVSSANSYLKGPSTPTLNSRGSSPPNYQNMDSPNLSFSNYGLSGYAINPASPPMMGNH--SGNLPLFFENVAAASAMGVSGMDSRALGGGLALRPNLMAAAAELQNLSRVGNHSSGSSIQVPLMDPLYLQYLRSTEYAAAQAAALNDPSMDRECIGNSYMDLLGLQKAYLGALPSPQKSQYGLPYLGKSDSLNHGFYGNPAFGLGISYPGSPLVNPLIPNSPIGSGSPVRHGERNMRFPSGMRNLAAGGVMGSWHSEAGGNLDESFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATIEEKNMVFHEIMPQALTLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLNLSLQMYGCRVIQKAIEVVDLDQQTRMVAELDGHIMRCVRDQNGNHVIQKCIECIPQDAIQFIVSVFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQHIVMDEILRSICMLAQDQYGNYVVQHVLEHGKPHERSAIINKLIGEIVQMSQQKFASNVVEKCLTFGTPAERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELLLNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLSSYSA 1017
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P3ZDC6 ((pumilio homolog 1-like isoform X1 {ECO:0000313|RefSeq:XP_015876848.1}))
HSP 1 Score: 1390.56 bits (3598), Expect = 0.000e+0
Identity = 732/1063 (68.86%), Postives = 845/1063 (79.49%), Query Frame = 0
Match: A0A6P3ZDC6 ((pumilio homolog 1-like isoform X1 {ECO:0000313|RefSeq:XP_015876848.1}))
HSP 1 Score: 1390.56 bits (3598), Expect = 0.000e+0
Identity = 732/1063 (68.86%), Postives = 845/1063 (79.49%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQN----EDLGFMLRNQEISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGL-----LSG----GGSG-VSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG---------DRRKIGRE--DGGDGSRSLFSVQ-----MEKGQQQGSNG--EWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGR-SSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPGH--LQSISQSGKGSY-----GYGVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG---DSRRMGGLALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAG--------EGL-NNYMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLGMSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSAA 1010
M+TD+Y+KMMS+I MRSM++N EDL ++R Q +RE +L++YRSGSAPPTVEGSLNAVGGL LSG GG G V+EEE+RSDP Y++YYY+NVN+NPRLPPPLLSKED RFAQR+QG G G DRRK+G+ +GG+ +RSLFSVQ E+ + + G EW DGLIGL GRQKSIAE+IQDD +H S S HPSRP SRNAF++G+E SE+ FA DL S+DA+ +S N QG+ + Q++ +S SHTYA+ALGASLSRSTTPDPQL+ARAPSPRIP GGR +S++ ++V G SFNG S + + DLVAALS + LS N ++DEEN ARS+IQ EID+ NLF+LQGDQ + ++ YLN+SE GH + S QS KGSY GV ELNNSSL+ D QV LHK ++SANSYLKGPSTPT N GSS + Y+NV + NSSF +YGL G+ ++P SPS++G+ SGSLPPLFEN AAA+ MG GGLALGPN++A AAELQN+ R GN A N LQVPL+DPLY+QYL+SNE+AA EG+ N YMDL +QKAYLG +LSP KSQ+G+PY+G S+ HGYYGN A+GLGMSYPGSPLGG LLPN GSP+RH +R+LRF SG+RN GG+MG WH EAGG LDE+F SSLLDEFK+NK +CFELSEIAGHVVEFSADQYGSRFIQQKLETAT+EEKNMVF+EI PQALSLMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVL LSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIEC+PEDAIQFI+S FYDQVVTLSTHPYGCRVIQRVLEHC DPKTQ ++MDEI+ SVCMLAQDQYGNYVVQHVLEHGKPHERT II KL GQIVQMSQQKFASNV+EKCLTFGTP ERQ+LV+EMLG+TDENEPLQ MMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRI +L ++ A
Sbjct: 1 MVTDTYTKMMSEISMRSMLKNSDYGEDLSMLIREQRRQQEASEREKELNLYRSGSAPPTVEGSLNAVGGLFDASMLSGFKKDGGKGFVTEEELRSDPVYVNYYYSNVNLNPRLPPPLLSKEDWRFAQRLQGGGGGGGGGGSSAVGGIGDRRKVGKSSGEGGNANRSLFSVQPGVTGKEETEVESRKGAAEWGVDGLIGL-PGLGLGRQKSIAEIIQDDMSHAKSVSRHPSRPASRNAFEDGLESSEAQFAHLHHDLGSIDALRSSGNKQGMPAAQSIGASASHTYASALGASLSRSTTPDPQLVARAPSPRIPPVGGGRATSMERRSVGGQNSFNGVSPNIGESEDLVAALSGMNLSTNGMIDEENQARSQIQNEIDNSHNLFNLQGDQNHINKNSYLNKSESGHYHMHSFPQSAKGSYQNMGKSSGVGMELNNSSLMFDEQVELHKSVVSSANSYLKGPSTPTLNGRGSSTAHYQNVENTNSSFSSYGLGGYGVSPPSPSVMGSPLGSGSLPPLFENAAAASVMGGVDSGAFGGGLALGPNMLAVAAELQNMGRVGNHGAGNALQVPLMDPLYMQYLRSNEYAASLNDPTMEREGMGNTYMDLFELQKAYLGTLLSPQKSQFGVPYIGKSGSMNHGYYGNPAFGLGMSYPGSPLGGPLLPNLSVASGSPVRHSERNLRFSSGMRNLSGGLMGGWHSEAGGNLDESFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQHIMMDEILLSVCMLAQDQYGNYVVQHVLEHGKPHERTAIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPIERQTLVNEMLGSTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISILTPHATA 1062
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0ED81 ((Pumilio 3 {ECO:0000313|EMBL:GFY83597.1}))
HSP 1 Score: 1387.47 bits (3590), Expect = 0.000e+0
Identity = 753/1045 (72.06%), Postives = 848/1045 (81.15%), Query Frame = 0
Match: A0A7J0ED81 ((Pumilio 3 {ECO:0000313|EMBL:GFY83597.1}))
HSP 1 Score: 1387.47 bits (3590), Expect = 0.000e+0
Identity = 753/1045 (72.06%), Postives = 848/1045 (81.15%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQNEDLGFML-RNQEISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGLL-------SGGGSGVSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIG---DRRKIGR--EDGGDGSRSLFSVQMEKGQQQGS-----NGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGR-SSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSYGY-----GVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAG------------EGLNN-YMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLG---MSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAG 997
MITDSYSKMMSD GMRS++Q+ D G L QE SDRER+ LSMYRSGSAPPTVEGSL+AVGGL + GV EEE+RSDPAY+SYYYANVN+NPRLPPPLLSKED R AQR+QG G +G DRRK+ R +DGG +RSLFS+ E ++GS GEW GDGLIGL GLGLG R+KSIAE+IQDD + TS S HPSRP SRNAFD+GVE SESHF +L S+DA+ + ANIQG+ + QN+ +S SHTYA+AL ASLSRSTTPDPQL+ARAPSPRIP GR SS+D +N NGS SFNG S +S+ ADLV ALS ++LS N ++DE+N ARS IQQEID Q+ FHL+ DQ + KQHPYLNRSE G HL S SQSGK Y GV +LNNS L +D QV+LHKP+++SANSYLKGPSTP NSGGSSPS Y N SPNSSF NYG +G+ INP SPSM+GNQ A+ PPLFENV A+AMG DSR +GG LALGPN++AAAAELQN SRAGN NA + LQ+PL+DPLYLQYL++ E+AA EG+ N YMDL G+QKAYLG +LSP KSQYGLPYLG SL H YYGN ++GLG MSY GSPL G LLPNS G GSP+RHG+R++RF S +RN GGVMG WHPEAGG LD F SSLLDEFK+NK RCFELSEI+GHVVEFSADQYGSRFIQQKLETAT+EEK+MVF EI PQALSLMTDVFGNYVIQKFFEHGTA+QIRELADQL GHVL LSLQMYGCRVIQKAIEVVDLDQQT+MVAELDG++MRCVRDQNGNHVIQKCIECIP++AI+FIIS+FYDQVVTLSTHPYGCRVIQRVLEHC DPKTQ++VMDE+++SV MLAQDQYGNYVVQHVLEHGKPHER+ II KLIGQIVQMSQQKFASNV+EKCL+FGTP ERQ+LV+EMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAG
Sbjct: 1 MITDSYSKMMSDAGMRSVLQSNDYGEELGLWQEASDRERE----LSMYRSGSAPPTVEGSLSAVGGLFGGGSGGGTADFGGVPEEEMRSDPAYVSYYYANVNLNPRLPPPLLSKEDWRSAQRLQGTGGGLGLGGIGDRRKVSRGGDDGGK-NRSLFSMGPEFNGKEGSGIESSKGEWGGDGLIGLSGLGLGSRKKSIAEIIQDDISQATSVSRHPSRPASRNAFDDGVESSESHFVHLHHELTSMDALRSGANIQGIPAAQNIGTSASHTYASALAASLSRSTTPDPQLVARAPSPRIPPVGAGRASSMDKRNGNGSNSFNGVSPNMSEPADLVTALSGMSLSTNGVVDEDNLARSVIQQEIDYPQDPFHLRADQNHIKQHPYLNRSESGQFHLHSASQSGKALYSQAGKSGGVEVDLNNSFLTADGQVSLHKPAVSSANSYLKGPSTPILNSGGSSPSNYHNFDSPNSSFSNYGFSGYGINPASPSMIGNQMAN--FPPLFENVVNASAMGVSGLDSRALGGDLALGPNVMAAAAELQNFSRAGNHNAGSALQMPLMDPLYLQYLRTTEYAAAQAAAFSDPTIDREGIGNAYMDLIGLQKAYLGSLLSPQKSQYGLPYLGKSGSLNHNYYGNPSFGLGINGMSYTGSPLAGPLLPNSHIGSGSPVRHGERNMRFSSSLRNLAGGVMGSWHPEAGGNLDGHFGSSLLDEFKSNKTRCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKSMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTRMVAELDGNVMRCVRDQNGNHVIQKCIECIPQEAIEFIISVFYDQVVTLSTHPYGCRVIQRVLEHCIDPKTQRIVMDEVLQSVIMLAQDQYGNYVVQHVLEHGKPHERSAIIIKLIGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAG 1038
BLAST of XM_017366922.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RWY8 ((Pumilio 2 like {ECO:0000313|EMBL:PSS34526.1}))
HSP 1 Score: 1381.7 bits (3575), Expect = 0.000e+0
Identity = 745/1057 (70.48%), Postives = 853/1057 (80.70%), Query Frame = 0
Match: A0A2R6RWY8 ((Pumilio 2 like {ECO:0000313|EMBL:PSS34526.1}))
HSP 1 Score: 1381.7 bits (3575), Expect = 0.000e+0
Identity = 745/1057 (70.48%), Postives = 853/1057 (80.70%), Query Frame = 0
Query: 1 MITDSYSKMMSDIGMRSMMQNEDLGFML-RNQEISDRERDREIDLSMYRSGSAPPTVEGSLNAVGGL-------LSGGGSGVSEEEIRSDPAYISYYYANVNMNPRLPPPLLSKEDGRFAQRMQGAGSSAAIGDR---RKIGR--EDGGDGSRSLFSVQMEKGQQQGS-----NGEWSGDGLIGLPGLGLGGRQKSIAELIQDDTTHQTSASGHPSRPTSRNAFDNGVEPSESHFAQFKQDLASLDAVHASANIQGLSSTQNVNSSVSHTYAAALGASLSRSTTPDPQLLARAPSPRIPSARGGR-SSLDLQNVNGSISFNGASGRVSQQADLVAALSEITLSNN-LLDEENHARSRIQQEIDDHQNLFHLQGDQYNNKQHPYLNRSEPG--HLQSISQSGKGSYGY-----GVRAELNNSSLLSDVQVNLHKPSLASANSYLKGPSTPTHNSGGSSPSQYRNVGSPNSSFLNYGLNGHNINPGSPSMLGNQFASGSLPPLFENVAAATAMG----DSRRMGG-LALGPNLIAAAAELQNLSRAGNQNALNGLQVPLVDPLYLQYLQSNEFAAG------------EGLNN-YMDLAGIQKAYLGGVLSPPKSQYGLPYLGSPSSLTHGYYGNQAYGLG---MSYPGSPLGGSLLPNSPFGPGSPIRHGDRSLRFPSGIRNFGGGVMGPWHPEAGGMLDETFASSLLDEFKNNKARCFELSEIAGHVVEFSADQYGSRFIQQKLETATSEEKNMVFDEITPQALSLMTDVFGNYVIQKFFEHGTATQIRELADQLNGHVLNLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPEDAIQFIISIFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQQVVMDEIMRSVCMLAQDQYGNYVVQHVLEHGKPHERTCIINKLIGQIVQMSQQKFASNVVEKCLTFGTPEERQSLVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVLASYSA 1009
MIT+SYSKM+SD GMRS++Q+ D G L QE S+RER+ LS YRSGSAPPTVEGSL+AVGGL ++ GV EEE+RSDPAY+SYYYANVN+NPRLPPPLLSKED R+AQR+QG G +G RK+ R +DGG +RSLFS+ E ++ S GEW GDGLIGL GLGLG R+KSIAE+IQDD +H T S HPSRP SRNAF++GVE SESHFA +LAS+D + + ANIQG+ + Q++ +S SHTYA+AL ASLSRSTTPDPQ +ARAPSP IP GR SS+D +N NGS S NG S +S+ ADLVAALS ++LS N ++DEEN ARS IQQEIDDHQ+ FHL+ DQ + KQ+PY+N SE G HL S SQSGK Y GV ++N+S L +D QV LHKP+++SANSYLKGP TP NSGGSS S Y N GSPNSSF NYG +G+ INP SP+M+GNQ +G+ PPLFENV A+AMG DSR +GG LALGPN++A AELQN SRAGN NA + LQ+PL+DPLYLQYL++ E+AA EG+ N YMDL G+QKAYLG + SP KSQYGLPYLG SL H YYGN ++GLG MSYPGSPL G LLPNS G GSP+RHG+R++RF S +RN GGVMG W PEAGG LD FASSLLDEFK+NK RCFELSEI+GHVVEFSADQYGSRFIQQKLETAT+EEKNMVF EI PQALSLMTDVFGNYVIQKFFEHGTA+QI ELADQL GHVL LSLQMYGCRVIQKAIEVVDLDQQT+MVAEL G++MRCVRDQNGNHVIQKCIECIP++AI+FIIS+FYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQ++VMDE+++SV MLAQDQYGNYVVQHVLEHGKPHER+ II KLIGQIVQMSQQKFASNV+EKCL+FGTP ERQ+LV+EMLGTTDENEPLQ MMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIG+++SYSA
Sbjct: 1 MITNSYSKMISDTGMRSVLQSSDYGEELGLWQEASERERE----LSRYRSGSAPPTVEGSLSAVGGLFGGGSGGVAADFVGVPEEEMRSDPAYVSYYYANVNLNPRLPPPLLSKEDWRYAQRLQGTGGGLGLGGIGDGRKVSRGGDDGGK-NRSLFSMGPECNGKEDSGVESRKGEWGGDGLIGLSGLGLGSRKKSIAEIIQDDISHATPVSRHPSRPASRNAFNDGVESSESHFAHLHHELASMDVLRSGANIQGIPAAQSIGTSASHTYASALAASLSRSTTPDPQQVARAPSPHIPPVGVGRVSSMDKRNGNGSNSVNGVSPSMSEPADLVAALSGMSLSTNGVVDEENLARSVIQQEIDDHQDAFHLRADQNHIKQNPYINISESGKFHLHSASQSGKALYSNVGKSGGVEVDMNSSYLTADGQVALHKPAVSSANSYLKGPPTPILNSGGSSASNYHNFGSPNSSFSNYGFSGYAINPASPTMMGNQ--TGNFPPLFENVVNASAMGVSGLDSRALGGGLALGPNVMAVTAELQNFSRAGNHNAGSALQMPLMDPLYLQYLRTTEYAAAQAAPFSDPTIDREGIGNAYMDLIGLQKAYLGSLHSPQKSQYGLPYLGKSGSLNHNYYGNPSFGLGINGMSYPGSPLAGPLLPNSHIGSGSPVRHGERNMRFSSSLRNLAGGVMGSWQPEAGGSLDGHFASSLLDEFKSNKTRCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIGELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTRMVAELHGNVMRCVRDQNGNHVIQKCIECIPQEAIEFIISVFYDQVVTLSTHPYGCRVIQRVLEHCSDPKTQRIVMDEVLQSVIMLAQDQYGNYVVQHVLEHGKPHERSAIIIKLIGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGIISSYSA 1050
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZNN8 | E-Value: 0.000e+0, PID: 73.80 | PUM-HD domain-containing protein {ECO:0000259|PROS... [more] |
| A0A5J5BA14 | E-Value: 0.000e+0, PID: 71.39 | PUM-HD domain-containing protein {ECO:0000259|PROS... [more] |
| A0A4S4DFK4 | E-Value: 0.000e+0, PID: 73.11 | PUM-HD domain-containing protein {ECO:0000259|PROS... [more] |
| A0A7J7I5J6 | E-Value: 0.000e+0, PID: 70.23 | PUM-HD domain-containing protein {ECO:0000259|PROS... [more] |
| F6HNV5 | E-Value: 0.000e+0, PID: 70.29 | PUM-HD domain-containing protein {ECO:0000259|PROS... [more] |
| A0A2R6RRD0 | E-Value: 0.000e+0, PID: 71.52 | (Pumilio 2 like {ECO:0000313|EMBL:PSS32574.1})[more] |
| A0A5B6ZMA7 | E-Value: 0.000e+0, PID: 73.35 | PUM-HD domain-containing protein {ECO:0000259|PROS... [more] |
| A0A6P3ZDC6 | E-Value: 0.000e+0, PID: 68.86 | (pumilio homolog 1-like isoform X1 {ECO:0000313|Re... [more] |
| A0A7J0ED81 | E-Value: 0.000e+0, PID: 72.06 | (Pumilio 3 {ECO:0000313|EMBL:GFY83597.1})[more] |
| A0A2R6RWY8 | E-Value: 0.000e+0, PID: 70.48 | (Pumilio 2 like {ECO:0000313|EMBL:PSS34526.1})[more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |