Resource Type:
Polypeptide
Name:
XM_017367721.1
Identifier:
XM_017367721.1-protein
Sequence:
MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQ
PHPSMQPYPFHHMQQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVP
SPFRGSYDSPPPAPPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDN
PAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVT
PSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQHSQPFPGTMG
GPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWF
MQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHD
LSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDT
IRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHW
QSDKQNFSDQERLENQVPSLSAMPQQFLQNSSPAGSFPGAIPMLSSAQPT
NLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMS
PLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEYER
DSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATAN
PNEASQYDDVYSSYRKQRSTNYHTSMSARSATTTTR
Sequence Length:
686
Sequence Checksum:
35af5287128c60a52cd5b7454862c971
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367721.1, derives from mRNA, XM_017367721.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AA58 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53045.1}))
HSP 1 Score: 889.797 bits (2298), Expect = 0.000e+0
Identity = 500/670 (74.63%), Postives = 556/670 (82.99%), Query Frame = 0
Match: A0A5B7AA58 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53045.1}))
HSP 1 Score: 889.797 bits (2298), Expect = 0.000e+0
Identity = 500/670 (74.63%), Postives = 556/670 (82.99%), Query Frame = 0
Query: 30 FGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQ-GQLHPHPP-HPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPP-APPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQ-HSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEG---PLNSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 682
FGFHPQHQQFPPSVHGPPF+ PHPS+Q +PFH HMQQ QL PHPP HPH+LHLQQQQQ P+FPPH+PPH+VPSPF G YDS PP A PPSDPEL+K IDKLVEYAAK+GPEFEAM+RE Q+DNPAY FLFGG+GHNYYRY LWL+TRP GGPFN PFPS+SIP+MHPPNP++ PSP N P LNAS GA++S+L PQMHQPPFP FY+QQ HSQ F G GR +DQSS +FKGLSGPLPSDVAMELNNVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV+AVDDSERQLHI++L+NDILFDSLQRR N HDL NEALAF+PVLG +LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTIR LE+EM G P +S P ++FS+ + D S GL Q +NHNVL WQ DKQ NF DQE NQVP ++AMP QQFL NS AG+F G++P+ SS QP N Q PHLLP T+N+GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEG P +S D+DDEYER+ P RKGG CIPPPPNLQVDP+TGT DGSVERKPGS SGRLGLGATANP EASQYDDVYSSYRKQRST YH+SMSAR+
Sbjct: 32 FGFHPQHQQFPPSVHGPPFLPPHPSLQQFPFHRHMQQPQQLLPHPPTHPHVLHLQQQQQPPPAFPPHLPPHLVPSPFLGPYDSAPPLAAPPSDPELEKRIDKLVEYAAKNGPEFEAMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRPSGGPFNAPFPSSSIPMMHPPNPLMNPSPLNAP-LNASAAA-GASASMLGTPQMHQPPFPSFYEQQQHSQSFVGH----GRPDFDQSSRSFKGLSGPLPSDVAMELNNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHDLDNEALAFKPVLGFMLARIYHNPQNKEENQLRLQKILQFWASKEVYDHDTIRGLENEM-NGGPPSSSFPGPPKEFSAAATDPSA-GGLSQQPTNHNVLQWQPDKQNSVPNFPDQEH-PNQVPPVAAMPPSLGAQQFLPNSVTAGAFMGSMPIPSSVQPAN-QQLPHLLPTPTTNVGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGAMKPSDSRDEDDEYEREPPTRKGGACIPPPPNLQVDPDTGTYADGSVERKPGSSGSGRLGLGATANPTEASQYDDVYSSYRKQRSTTYHSSMSARATA 691
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A9K8 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53044.1}))
HSP 1 Score: 873.233 bits (2255), Expect = 0.000e+0
Identity = 509/702 (72.51%), Postives = 572/702 (81.48%), Query Frame = 0
Match: A0A5B7A9K8 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53044.1}))
HSP 1 Score: 873.233 bits (2255), Expect = 0.000e+0
Identity = 509/702 (72.51%), Postives = 572/702 (81.48%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQF--GFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQ-GQLHPHPP-HPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPP-APPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQ-HSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQN----FSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADD---DDEYERDSPVRKGGTCIPPPPNL-QVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 682
MDRQ HDY+A A QQ QQQ GFHPQHQQFPPSVHGPPF+ PHPS+Q +PFH HMQQ QL PHPP HPH+LHLQQQQQ P+FPPH+PPH+VPSPF G YDS PP A PPSDPEL+K IDKLVEYAAK+GPEFEAM+RE Q+DNPAY FLFGG+GHNYYRY LWL+TRP GGPFN PFPS+SIP+MHPPNP++ PSP N P LNAS GA++S+L PQMHQPPFP FY+QQ HSQ F G GR +DQSS +FKGLSGPLPSDVAMELNNVLN L+GTKESIKGAK+WFMQRSPFAPAL EALRDRV+A+DDSERQLHI++L NDILFDSLQRR N +DL NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFW+SKEVY+ DTI LE+EMIGG P +SF GHP+ S ++ S+ +GLP Q +N NVLHWQ DKQN SDQE + QVP + AMP Q FL NS P G F G +P+ SS QP N Q PH L + T+N+GEKLPPYPLFPPGLIPGMV+KMQIGSGVPYSPMSPLDIPT+IPPS SPS++LERVSKFF+EIGEVNPSEGP+ +D D+EYER+ P+RKGG CIPPPPNL QVDPETGT DGSVERKPGS SGRLGLGATANPNEASQYDDVY+SYRKQRSTNYH+SMSARSAT
Sbjct: 1 MDRQAHDYAAAAAMAFAQQQQQAANMQQQQQFGFHPQHQQFPPSVHGPPFLPPHPSLQQFPFHRHMQQPQQLLPHPPTHPHVLHLQQQQQPPPAFPPHLPPHLVPSPFLGPYDSAPPLAAPPSDPELEKRIDKLVEYAAKNGPEFEAMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRPSGGPFNAPFPSSSIPMMHPPNPLMNPSPLNAP-LNASAAA-GASASMLGTPQMHQPPFPSFYEQQQHSQSFVGH----GRPDFDQSSRSFKGLSGPLPSDVAMELNNVLNNLSGTKESIKGAKIWFMQRSPFAPALGEALRDRVFAMDDSERQLHIIYLVNDILFDSLQRRINPNDLDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWSSKEVYEHDTICGLENEMIGGPPPSSFPGHPKE--LSAASTDSSAAGLPQQATNLNVLHWQPDKQNSVPTLSDQEHPDKQVPLVPAMPPSLVNQPFLPNSVPTGGFMGPMPVPSSIQPAN-QQPPHFLSSPTANVGEKLPPYPLFPPGLIPGMVKKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSQILERVSKFFKEIGEVNPSEGPMKPSDSRDEDEEYEREPPIRKGGACIPPPPNLQQVDPETGTFADGSVERKPGSSGSGRLGLGATANPNEASQYDDVYTSYRKQRSTNYHSSMSARSAT 693
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QAM3 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSS04950.1}))
HSP 1 Score: 855.129 bits (2208), Expect = 0.000e+0
Identity = 479/703 (68.14%), Postives = 538/703 (76.53%), Query Frame = 0
Match: A0A2R6QAM3 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSS04950.1}))
HSP 1 Score: 855.129 bits (2208), Expect = 0.000e+0
Identity = 479/703 (68.14%), Postives = 538/703 (76.53%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPF-HHMQQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPP-FYDQ-QHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEY------ERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPG-SVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATT 683
MDRQ HDY+A A QQQ A QQQ+ FGFHPQHQQFPPSVHGPPF+ PHPS+Q YPF HMQQ H Q +FPPHMPPH+VPS G YDSPPP ELQKCIDKLVEY AK+GPEFEAM+RE Q+DNP Y FLFGG+GHNYYRY LWL+TRPPGGP+NPPFPS+S+P MHP NPM+ SP N P LL PQ+HQPPFPP FY+ QHSQPF G GR YDQSS FKGLSGPLPSDV MEL+NVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV++VDDSERQLHI++L+NDILFDSLQRR N HDL NEALAF+PVLGS+LARI+HNPQNKEENQ RLQK+LQFWASKEVYD DTI E+EM GG P N F G +D S+ S D ST +GLP + +NH+ L WQ+D++ N SD+E + QVPS++ MP Q FL NS P G F G++PM SS QP N Q+ LLPA T+N GEK+PPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT IPPS+ SPSE+LERVSKFF+ IGEVNPSEGP+ + D + ER+SPVRKGG CIPPPPNLQVDPETGT DGSVE+KPG S SGRLGLGATANP+EASQYDDVYSSYRKQRSTNYH+SMSAR+ATT
Sbjct: 1 MDRQAHDYAAAM-AYAQQQQAANIQQQKPFGFHPQHQQFPPSVHGPPFLSPHPSLQQYPFPRHMQQPHQLHPH---PPPHPHLLHQPPSAFPPHMPPHLVPSSLLGPYDSPPPPSASPSDPELQKCIDKLVEYTAKNGPEFEAMIREKQQDNPVYSFLFGGEGHNYYRYKLWLSTRPPGGPYNPPFPSSSVPTMHPQNPMMNSSPLNAP--------------LLGGPQIHQPPFPPSFYEHHQHSQPFVGH----GRSDYDQSSRPFKGLSGPLPSDVGMELSNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFSVDDSERQLHIIYLANDILFDSLQRRNNPHDLDNEALAFKPVLGSMLARIFHNPQNKEENQLRLQKILQFWASKEVYDHDTICAFENEMAGGPPMNLFLGS-LKDLSAASTDPST-AGLPQRATNHSSLQWQADQRGLVTNVSDKEHPDKQVPSIAGMPSPLAAQSFLPNSVPTGPFTGSLPMPSSIQPVNQQA---LLPASTANNGEKMPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTAIPPSSVSPSEVLERVSKFFKAIGEVNPSEGPMKGSGDSKDDGDDYYEERESPVRKGGACIPPPPNLQVDPETGTFADGSVEQKPGSSTGSGRLGLGATANPSEASQYDDVYSSYRKQRSTNYHSSMSARAATT 676
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H1T4 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46153.1}))
HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0
Identity = 484/701 (69.04%), Postives = 545/701 (77.75%), Query Frame = 0
Match: F6H1T4 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46153.1}))
HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0
Identity = 484/701 (69.04%), Postives = 545/701 (77.75%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQGQLHPHPPHPHLLHLQQQQQLNP--SFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSS-LLNVPQMHQPPFPPFYDQQHSQPFPGT-MGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDK----QNFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 682
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQQFPPSVHGPPF+ PHPS+Q YPFH HM P PH L QQQ FPPH+P H+VPSPF G ++S PP P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP+MH P NPM+ PS LNA S+ +L PQMHQPP+ PFYDQQ Q G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+AVDDSERQLHI++L+NDILFDSLQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI LE EMIGG P+NSF+G P ++ S+V D S SGLP Q+++HN+ HWQ +K + +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERDSPVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVY+SYRKQRSTNYH+SMSAR+ T
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQQFPPSVHGPPFLPPHPSLQQYPFHRHMPPQPQLHPHPPPHPHLLHLQQQQQAPSGFPPHLPSHLVPSPFHGPFESGPPPSNPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPMMHSPMNPMMNPS------LNAPPAAAAGASASMLGTPQMHQPPYLPFYDQQQQQHQHPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGEMIGGPPSNSFSG-PHKELSAVPVDPSAVSGLP-QSAHHNIPHWQPEKPCSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--AGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAGT 691
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438DPH7 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:RVW37329.1}))
HSP 1 Score: 847.81 bits (2189), Expect = 0.000e+0
Identity = 494/703 (70.27%), Postives = 552/703 (78.52%), Query Frame = 0
Match: A0A438DPH7 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:RVW37329.1}))
HSP 1 Score: 847.81 bits (2189), Expect = 0.000e+0
Identity = 494/703 (70.27%), Postives = 552/703 (78.52%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HM---QQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQ-PPFPPFYDQQ--HSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDK----QNFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 682
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQ FPPSVHGPPF+ PHPS+Q YPFH HM Q PPHPHLLHLQQQQQ +FPPH+P H+VPSPF G Y+S PP P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP MH P NPM+ PS LNA GA++S+L PQMHQ P + PFYDQQ H QPF G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+A+DDSERQLHI++L+NDILFDSLQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI LE +MIGG P NSF+G ++ S+V AD S SGLP QT++HNV WQ DK + +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERD PVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVY+SYRKQRST YH+SMSAR T
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQPFPPSVHGPPFLPPHPSLQQYPFHRHMPPQSQQLHPHPPPHPHLLHLQQQQQPPSAFPPHLPSHLVPSPFHGPYESGPPPSAPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPTMHSPMNPMMNPS------LNAPPAAAGASASMLGTPQMHQQPSYLPFYDQQQQHPQPFLGH----GRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFALDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGL-LKELSAVPADPSAVSGLP-QTAHHNVPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--TGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDPPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEVSQYDDVYTSYRKQRSTTYHSSMSARVGT 689
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PYB8 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSR98746.1}))
HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0
Identity = 492/710 (69.30%), Postives = 548/710 (77.18%), Query Frame = 0
Match: A0A2R6PYB8 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSR98746.1}))
HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0
Identity = 492/710 (69.30%), Postives = 548/710 (77.18%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPF-HHMQQ-GQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPP-FYDQ-QHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVP--------SLSAMPQQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLP-AQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEY-------ERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPG-SVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATTT 684
MDRQ HDY+A A QQQ A QQQQQFGFHPQHQQFPPS HGPPF+ PHPS+Q YPF HMQQ QLHPHP HLLH Q P+FPPHMPPH+VPS G YDSPPP P ELQKCIDKLVEY AK+GPEFEAM+RE Q+DNP Y FLFGG+GHNYYRY LWL+TRPPGGP+NPPFPS+S+P MHP NPM+ PS N P LL PQ+HQPPFPP FY+ QHSQ F G GR YDQSS FKGLSGPLPSDV MEL+NVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV++VDDSERQLHI++L+NDILFDSLQRR N HDL NEALAF+PVLGS+LARI+H+PQNKEENQ RLQK+LQFWASKEVYD DTIR LE+EM GG P F G +D S+ S D ST +GLP NH+ L WQ+DKQ N SD+E + Q+P SL+A P FL NS P G F G++P+ SS QP N Q+ LLP + T+N GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS+ SPSE+LERVSKFF+EIGEVNPSEGP+ + D + ER+SPVRKGG CIPPPPNLQVDPETGT DGSVERKPG S SGRLGLGATANPNE SQYDDVYSSYRKQRSTNYHTSMSAR++TT+
Sbjct: 1 MDRQAHDYAAAM-AFAQQQQAANIQQQQQFGFHPQHQQFPPSAHGPPFLSPHPSLQQYPFPRHMQQPHQLHPHP---HLLH-----QPPPAFPPHMPPHLVPSSLLGPYDSPPPPSAPPSDPELQKCIDKLVEYTAKNGPEFEAMIREKQQDNPVYSFLFGGEGHNYYRYKLWLSTRPPGGPYNPPFPSSSVPTMHPSNPMMNPSSLNAP--------------LLGGPQIHQPPFPPSFYEHHQHSQTFVGH----GRSDYDQSSRPFKGLSGPLPSDVGMELSNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFSVDDSERQLHIVYLANDILFDSLQRRINPHDLDNEALAFKPVLGSMLARIFHHPQNKEENQLRLQKILQFWASKEVYDHDTIRALENEMAGGPPMKLFPGS-FKDLSAASTDPST-AGLPQHAPNHSALQWQADKQGLVPNLSDKEHPDKQLPPIVGGMPSSLAAQP--FLPNSVPTGPFTGSLPIPSSIQPANQQA---LLPTSSTANTGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSSVSPSEVLERVSKFFKEIGEVNPSEGPMKGSGDSKDDDDDDYYAERESPVRKGGACIPPPPNLQVDPETGTFADGSVERKPGTSTGSGRLGLGATANPNEVSQYDDVYSSYRKQRSTNYHTSMSARASTTS 676
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DXF5 ((SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein {ECO:0000313|EMBL:GFS43072.1}))
HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0
Identity = 491/706 (69.55%), Postives = 545/706 (77.20%), Query Frame = 0
Match: A0A7J0DXF5 ((SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein {ECO:0000313|EMBL:GFS43072.1}))
HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0
Identity = 491/706 (69.55%), Postives = 545/706 (77.20%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPF-HHMQQ-GQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPP-FYDQ-QHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLP-AQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL------NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPG-SVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATTT 684
MDRQ HDY+A A QQQ A QQQQQFGFHPQHQQFPPS HGPPF+ PHPS+Q YPF HMQQ QLHPHP HLLH Q P+FPPHMPPH+VPS G YDSPPP P ELQKCIDKLVEY AK+GPEFEAM+RE Q+DNP Y FLFGG+GHNYYRY LWL+TRPPGGP+NPPFPS+S+P MHP NPM+ PS N P LL PQ+HQPPFPP FY+ QHSQ F G GR YDQSS FKGLSGPLPSDV MEL+NVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV++VDDSERQLHI++L+NDILFDSLQRR N HDL NEALAF+PVLGS+LARI+HNPQNKEENQ RLQK+LQFWASKEVYD DTIR LE+EM GG P G +D S+ S D ST +GLP NH+ L WQ+DKQ N SD+E + Q+P + MP Q FL NS P G F G++P+ SS QP N Q+ LLP + T+N GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS+ SPSE+LERVSKFF+EIGEVNPSEGP+ DDD ER+SPVRKGG CIPPPPNLQVD ETGT DGSVERKPG S SGRLGLGATANPNE SQYDDVYSSYRKQRSTNYH+SMSAR++TT+
Sbjct: 1 MDRQAHDYAAAM-AFAQQQQAANIQQQQQFGFHPQHQQFPPSAHGPPFLSPHPSLQQYPFPRHMQQPHQLHPHP---HLLH-----QPPPAFPPHMPPHLVPSSLLGPYDSPPPPSAPPSDPELQKCIDKLVEYTAKNGPEFEAMIREKQQDNPVYSFLFGGEGHNYYRYKLWLSTRPPGGPYNPPFPSSSVPTMHPSNPMMNPSSLNAP--------------LLGGPQIHQPPFPPSFYEHHQHSQTFVGH----GRSDYDQSSRPFKGLSGPLPSDVGMELSNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFSVDDSERQLHIIYLANDILFDSLQRRINPHDLDNEALAFKPVLGSMLARIFHNPQNKEENQLRLQKILQFWASKEVYDHDTIRALENEMAGGPPMKLSPGS-LKDLSAASTDPST-AGLPQHAPNHSALQWQADKQGLVPNLSDKEHPDKQLPPIVGMPSSLAAQPFLPNSVPTGPFTGSLPIPSSIQPVNQQA---LLPTSSTANTGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSSVSPSEVLERVSKFFKEIGEVNPSEGPMKGSGDSKDDDDDYYEERESPVRKGGACIPPPPNLQVDSETGTFADGSVERKPGTSTGSGRLGLGATANPNEVSQYDDVYSSYRKQRSTNYHSSMSARASTTS 674
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5XUG8 ((uncharacterized protein LOC111286246 {ECO:0000313|RefSeq:XP_022731858.1}))
HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 471/699 (67.38%), Postives = 538/699 (76.97%), Query Frame = 0
Match: A0A6P5XUG8 ((uncharacterized protein LOC111286246 {ECO:0000313|RefSeq:XP_022731858.1}))
HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 471/699 (67.38%), Postives = 538/699 (76.97%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFA---QQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFHHMQQGQLHPHP---PHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPP-APPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHP-PNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQV-----PSLSAMPQQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 682
MDR PH Y+A + QQQ+Q ANIQQQ FGFHPQHQQFP +VHGPPFI PHPS PY H QQ QLHPHP P L QQQQQ PSFP H+PPH+V SPF G YDSPPP A PPSD ELQK IDKLVEYA K+GPEFEAM+RE Q DNP Y FLFGG+G+ YYRY LWL+T PPGGP+ P FP +SIP+MHP PNP++ PS LNA + A+ + PQ+HQP FPPFYDQQH P G+ YDQS FKGLSGPLPSDVAMEL +LN L GTKESIK AK+WFMQRSPFAPALAEAL+DRV+A+DDSERQLH+++L+NDILFDSLQRR N DL NEALAF+PVLGS+LARIYHNPQN EENQ RLQK+LQFWASKEVYD+D I LESEM+ G PTNSF G P ++ S+ S ++ST +G+ QT+N+NV WQ DKQ N DQE + QV PSL+ QQFL NS P G FPG++P+ S+ QP +LQSA NIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSP+SPLDIPT+IPPS+ SPSE+L+RVSKFF+EIGEVNP +G +S D+DDEYE + P RKGG CIPPPPNLQVDP++GT DGS ERKPGS GRLGLGATANPNEASQYDDVY+SYRKQRST+YH+SMSAR+AT
Sbjct: 1 MDRPPHSYAAASAMAYSQQQRQPANIQQQ---FGFHPQHQQFPTTVHGPPFIPPHPSQFPYHPHMQQQPQLHPHPSLHPQLLHLQQQQQQQPPPSFPSHLPPHLVSSPFHGLYDSPPPLATPPSDTELQKRIDKLVEYATKNGPEFEAMIREKQHDNPDYSFLFGGEGNGYYRYKLWLSTLPPGGPY-PSFPPSSIPMMHPHPNPVMNPS------LNAPAMSAAASVGAMAAPQLHQPAFPPFYDQQHHHQHPQPFVTHGQPEYDQS---FKGLSGPLPSDVAMELTTILNNLNGTKESIKSAKIWFMQRSPFAPALAEALKDRVFALDDSERQLHVIYLANDILFDSLQRRVNPRDLDNEALAFKPVLGSMLARIYHNPQNNEENQSRLQKILQFWASKEVYDQDAIYALESEMMSGPPTNSFPG-PPKELSAASVESSTPAGILPQTANNNVTLWQPDKQSSIPNVLDQELPDKQVATALLPSLAN--QQFLPNSVPTGGFPGSMPLNSNLQPPSLQSA---------NIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTVIPPSSVSPSEILDRVSKFFKEIGEVNPYQG--SSKDEDDEYEIEPPTRKGGACIPPPPNLQVDPDSGTYADGSAERKPGSSGLGRLGLGATANPNEASQYDDVYTSYRKQRSTSYHSSMSARAAT 672
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H2C9 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46480.1}))
HSP 1 Score: 837.795 bits (2163), Expect = 0.000e+0
Identity = 490/701 (69.90%), Postives = 548/701 (78.17%), Query Frame = 0
Match: F6H2C9 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46480.1}))
HSP 1 Score: 837.795 bits (2163), Expect = 0.000e+0
Identity = 490/701 (69.90%), Postives = 548/701 (78.17%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HM---QQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQ-PPFPPFYDQQHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDK----QNFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 682
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQ FPPSVHGPPF+ PHPS+Q YPFH HM Q PPHPHLLHLQQQQQ +FPPH+P H+VPSPF G Y+S P P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP MH P NPM+ PS LNA GA++S+L PQMHQ P + PFYDQQ Q +G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+A+DDSERQLHI++L+NDILFDSLQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI LE +MIGG P NSF+G ++ S+V AD S SGLP QT++HNV WQ DK + +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IP S SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERD PVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVYSSYRKQRST YH+SMSAR T
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQPFPPSVHGPPFLPPHPSLQQYPFHRHMPPQSQQLHPHPPPHPHLLHLQQQQQPPSAFPPHLPSHLVPSPFHGPYESGSPPSAPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPTMHSPMNPMMNPS------LNAPPAAAGASASMLGTPQMHQQPSYLPFYDQQQQQHPQPFLGH-GRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFALDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGL-LKELSAVPADPSAVSGLP-QTAHHNVPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--TGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPLSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDPPVRKGGACIPPPPNLQVDPETGTYSDGSVERKPGSSGSARLGLGATANPNEVSQYDDVYSSYRKQRSTTYHSSMSARVGT 690
BLAST of XM_017367721.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438J0J5 ((Uncharacterized protein {ECO:0000313|EMBL:RVX02454.1}))
HSP 1 Score: 833.943 bits (2153), Expect = 0.000e+0
Identity = 478/712 (67.13%), Postives = 538/712 (75.56%), Query Frame = 0
Match: A0A438J0J5 ((Uncharacterized protein {ECO:0000313|EMBL:RVX02454.1}))
HSP 1 Score: 833.943 bits (2153), Expect = 0.000e+0
Identity = 478/712 (67.13%), Postives = 538/712 (75.56%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQGQLHPHPPHPHLLHLQQQQQLNP--SFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSS-LLNVPQMHQPPFPPFYDQQHSQPFPGT-MGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDSLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQT--------SNHNV------LHWQSDKQNFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATT 683
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQQFPPSVHGPPF+ PHPS+Q YPFH HM P PH L QQQ +FPPH+P H+VPSPF G ++S PP P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP+MH P NPM+ PS LNA S+ +L PQMHQPP+ PFYDQQ Q G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+AVDDSERQLHI++L+NDILFDSLQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI L+ EMIGG P+NSF+G P ++ S+V D S S T + H + L Q Q +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERDSPVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVY+SYRKQRSTNYH+SMSAR+ T+
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQQFPPSVHGPPFLPPHPSLQQYPFHRHMPPQPQLHPHPPPHPHLLHLQQQQQAPSAFPPHLPSHLVPSPFHGPFESGPPPSNPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPMMHSPMNPMMNPS------LNAPPAAAAGASASMLGTPQMHQPPYLPFYDQQQQQHQHPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLDGEMIGGPPSNSFSG-PHKELSAVPVDPSAVSVKCLLTVLFMQDCHNQHTITFRIGSLKSQVVCQVLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--AGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAGTS 703
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AA58 | E-Value: 0.000e+0, PID: 74.63 | (Putative calcium homeostasis endoplasmic reticulu... [more] |
| A0A5B7A9K8 | E-Value: 0.000e+0, PID: 72.51 | (Putative calcium homeostasis endoplasmic reticulu... [more] |
| A0A2R6QAM3 | E-Value: 0.000e+0, PID: 68.14 | (Calcium homeostasis endoplasmic reticulum protein... [more] |
| F6H1T4 | E-Value: 0.000e+0, PID: 69.04 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4615... [more] |
| A0A438DPH7 | E-Value: 0.000e+0, PID: 70.27 | (Calcium homeostasis endoplasmic reticulum protein... [more] |
| A0A2R6PYB8 | E-Value: 0.000e+0, PID: 69.30 | (Calcium homeostasis endoplasmic reticulum protein... [more] |
| A0A7J0DXF5 | E-Value: 0.000e+0, PID: 69.55 | (SWAP (Suppressor-of-White-APricot)/surp RNA-bindi... [more] |
| A0A6P5XUG8 | E-Value: 0.000e+0, PID: 67.38 | (uncharacterized protein LOC111286246 {ECO:0000313... [more] |
| F6H2C9 | E-Value: 0.000e+0, PID: 69.90 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4648... [more] |
| A0A438J0J5 | E-Value: 0.000e+0, PID: 67.13 | (Uncharacterized protein {ECO:0000313|EMBL:RVX0245... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |