Resource Type:
Polypeptide
Name:
XM_017367431.1
Identifier:
XM_017367431.1-protein
Sequence:
MYWATAKSVVVSAPRLRSLALLLRPPLHSRPFASSPYNIEQCNQIRSLKE
KKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISR
LTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAI
GIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCI
VEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGV
SRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKH
NSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIE
VTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPV
SYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLES
KEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEK
LVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKR
IHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAR
EHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKV
EVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALF
AHVSEGRRRKWVFPVLSQFDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQ
SLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHL
KSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCI
AGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRP
TWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCLQHETT
VELSTSDKNRIFHKAYEQSAGEKSACSVMASTNQMDVLWKEVESAVTKIC
QKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRL
YVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPS
KGFQLTNLADGRHRNFGTSDISLENVTLHR
Sequence Length:
1130
Sequence Checksum:
a17934d2ed15a396f9a67ebfa2426fe1
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367431.1, derives from mRNA, XM_017367431.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6S0L6 ((DNA mismatch repair protein {ECO:0000313|EMBL:PSS35824.1}))
HSP 1 Score: 1751.87 bits (4536), Expect = 0.000e+0
Identity = 855/1145 (74.67%), Postives = 976/1145 (85.24%), Query Frame = 0
Match: A0A2R6S0L6 ((DNA mismatch repair protein {ECO:0000313|EMBL:PSS35824.1}))
HSP 1 Score: 1751.87 bits (4536), Expect = 0.000e+0
Identity = 855/1145 (74.67%), Postives = 976/1145 (85.24%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLHSRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQF---------DKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCLQ-HETTVELSTSDKNRIFHKAYE-----QSAGEKSACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
M W TAK+VV+S PR RSL+LLLR PLH R F SSP + Q +I +KE K +G K+ R KEL L++K+YS++LWWK+RMQ+CRK STVQLI RL YSNLLGLDVNL+NGSLKEG +NWE+LQFKS+FPRE+LLCRVGDFYEAIGIDAC+LVEYAGLNPFGGLRSDS+P+AGCPVMNLRQTLDDLT NGYSVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSAKGYC+ISVLETMKTYS +D LTEEA+VTKLRTCQYHHLFLH SLKHNSSGT RWGEFGEGGLLWGEC AR FEWFEG+PVNEL+ KVKELYGL+ +VTFRN+TV S NRPR LHLGTATQIG I TEGIP L+KVLLPSDC GLPV YI+DLLLNPP+Y IASTIQAIC+ MS++ CSIPEF+C+S KLVKLLE +EANHIEFCKIK VLDE++QM+ NSEL E LKLL+DPTW ATGL IDFEKLV E E S RIGE+I L+G+ DQ I SY IP +FFE +ESSWKGR+KRIHL EAF EVEKAAE LS+AVTEDF+PI+SRIKAST P GGP+GEI YAREH +VWFKGKRF P+VWAGTPGE QIKQLR AVDSKG+KVGEEWFTT KVE AL RYHEAG+KAK KVLELLR LSAEL+A+IN+LVF+S LLVIAKALFAHVSEGRRRKWVFP L+ F D MK+ GLSPYWFD A+G+AV NTVDM+SLF+LTGPNGGGKSSLLRSICAASLLGICG M+PAESA IPHFDSIMLH+KSYDSP+DGKSSFQIEMSE+RSI++GATSRSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGIVSTHLHGIF+LPL TK TVHKAM TEY+DG +PTW+L DGIC+ESLAF+TAQ+EG+ E II+RAEELY SVY + ++ ++T +E+ TSD + + + E S +++ + STN+M++L EVESAVT +CQK+L++ Y K+N SEL V CV IAAREQPPP T+G+SSVYV+LRPDK+LYVGETDDL R+RAHRSK+G+ N SFLY LVPGKS+ACQLET LINQLP++GFQL NLADG+HRNFGTS SLE+VT HR
Sbjct: 1 MCWLTAKTVVISVPRWRSLSLLLRSPLHRRAFFSSPPLLRQGERIICIKEPKAFKGTTKSTRKLKELSNVLEDKEYSHVLWWKQRMQLCRKPSTVQLIKRLKYSNLLGLDVNLKNGSLKEGMLNWEILQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSVPRAGCPVMNLRQTLDDLTCNGYSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSAKGYCIISVLETMKTYSTDDELTEEALVTKLRTCQYHHLFLHTSLKHNSSGTCRWGEFGEGGLLWGECRARPFEWFEGNPVNELLSKVKELYGLEDKVTFRNITVVSENRPRPLHLGTATQIGVIRTEGIPCLLKVLLPSDCTGLPVLYIQDLLLNPPAYAIASTIQAICRLMSNVKCSIPEFSCISSGKLVKLLELREANHIEFCKIKCVLDEILQMYRNSELRETLKLLMDPTWVATGLKIDFEKLVSECEQASCRIGEMIFLEGERDQTISSYPHIPSEFFEDMESSWKGRIKRIHLEEAFIEVEKAAELLSVAVTEDFLPIISRIKASTTPFGGPKGEISYAREHESVWFKGKRFTPAVWAGTPGEVQIKQLRAAVDSKGRKVGEEWFTTAKVEDALTRYHEAGAKAKAKVLELLRTLSAELEAQINILVFSSTLLVIAKALFAHVSEGRRRKWVFPTLAPFLWLKDTESLDAADGMKITGLSPYWFDIAQGSAVQNTVDMRSLFLLTGPNGGGKSSLLRSICAASLLGICGLMIPAESALIPHFDSIMLHMKSYDSPSDGKSSFQIEMSEIRSIMTGATSRSLVLVDEICRGTETAKGTCIAGSIVETLDEIGCLGIVSTHLHGIFNLPLETKHTVHKAMATEYVDGLTKPTWKLVDGICKESLAFETAQKEGIPEAIIQRAEELYFSVYKKDALMERNDTKLEVCTSDID--VNGSNESCDPFSSISKRTFYPKVESTNRMELLRNEVESAVTILCQKKLIELYGKENTSELVEVNCVAIAAREQPPPSTIGSSSVYVMLRPDKKLYVGETDDLDGRIRAHRSKDGMHNVSFLYFLVPGKSLACQLETFLINQLPNQGFQLINLADGKHRNFGTSHFSLESVTSHR 1143
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5VY44 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1738.01 bits (4500), Expect = 0.000e+0
Identity = 838/1148 (73.00%), Postives = 974/1148 (84.84%), Query Frame = 0
Match: A0A6J5VY44 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1738.01 bits (4500), Expect = 0.000e+0
Identity = 838/1148 (73.00%), Postives = 974/1148 (84.84%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLH--SRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQFDKG---------GSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCL-QHETTVE------LSTSDKNRIFHKAYEQSAGEKSACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
MYW ++ VVS PR LALLLR P S F SP + Q +IR K++K LRG+ KA L LDE+ SNILWWKERM+MCRK STVQL+ RL YSNLLGLDVNL+NGSLKEG++NWE+LQFKS+FPRE+LLCRVGDFYEA+GIDAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSA+GYC+ VLETMKTYS+EDGLTEEA+VTKLRTC+YHHLFLH SL+ N SGT RWGEFGEGGLLWGEC+ R FEWFEG+PV +L+ KVK+LYGLD +VTFRNV+V+S NRP L LGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DL+LNPP+Y+I+STIQA C+ MS I CSIPEFTCVSPAKLVKLLE +EANHIEFC+IKNVLDE++QM EL+EIL+LL+DPTW ATGL IDFE LV E E SGRIGE+ISLD ++DQ++ S+ +P +FFE +ESSWKGR+KRIH+ EAF EVEKAAEALSLAVTEDFVPILSRIKA+TAPLGGP+GEILYAREH AVWFKGKRFAP+VWAGTPGE+QIKQL+PA+DSKG+KVGEEWFTTTKVE AL RYHEAG+KAK +VLELLRGLS++LQAKIN+LVF+S+LLVIAKALFAHVSEGRRRKWVFP L + K MK+VGLSPYW D A G+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSP+DGKSSFQ+EMSE+RSI+SGA+ RSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGI+STHLHGIF LPL TK TV+KAM T Y+DGQ +PTW+L DGICRESLAF+TA++EG+ ETII+RAE LY S YAN L ++ T VE S+SD++ + S+G+ A STN+M+VL KEVESA+T IC+K L++ YK+K SE++ + CV I AREQPPP T+G S VYV+LRPD+RLYVG+TDDL RVRAHRSKEG+QNA+FLY VPGKS+ACQLETLLINQLP++GF LTN+ADG+HRNFGTS+++L+ V + R
Sbjct: 1 MYWLATRNGVVSLPRCCHLALLLRSPPRKCSSSFIPSPPLLGQFRRIRCFKDQKVLRGSRKATNKLNALNNFLDERVLSNILWWKERMEMCRKPSTVQLVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEALGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSARGYCINFVLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHTSLRSNFSGTCRWGEFGEGGLLWGECSGRHFEWFEGNPVIDLLSKVKDLYGLDEDVTFRNVSVSSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLILNPPAYDISSTIQATCRLMSDITCSIPEFTCVSPAKLVKLLELREANHIEFCRIKNVLDEILQMRKTPELYEILQLLMDPTWVATGLKIDFETLVNECESTSGRIGEMISLDYEHDQKLSSFPVVPSEFFEDMESSWKGRIKRIHIEEAFAEVEKAAEALSLAVTEDFVPILSRIKATTAPLGGPKGEILYAREHEAVWFKGKRFAPAVWAGTPGEKQIKQLKPALDSKGRKVGEEWFTTTKVEDALTRYHEAGAKAKTRVLELLRGLSSDLQAKINILVFSSMLLVIAKALFAHVSEGRRRKWVFPTLGESYKSKDVKPGNGENGMKIVGLSPYWLDVAGGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPSDGKSSFQVEMSEIRSIVSGASKRSLVLVDEICRGTETAKGTCIAGSIVETLDTIGCLGIISTHLHGIFSLPLNTKNTVYKAMGTVYVDGQTKPTWKLMDGICRESLAFETAKKEGIPETIIERAENLYHSAYANEVLLGKNGTKVEQFCSTGFSSSDRSH-----PQSSSGKVEAVHKTGSTNRMEVLQKEVESAITVICRKMLIELYKEKKTSEVTEIHCVAIGAREQPPPSTIGVSCVYVILRPDRRLYVGQTDDLEGRVRAHRSKEGMQNANFLYFTVPGKSLACQLETLLINQLPNQGFHLTNVADGKHRNFGTSNLALDGVAVCR 1143
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9SJ69 ((DNA mismatch repair protein MSH1, mitochondrial {ECO:0000313|RefSeq:XP_011069365.1}))
HSP 1 Score: 1737.24 bits (4498), Expect = 0.000e+0
Identity = 832/1135 (73.30%), Postives = 963/1135 (84.85%), Query Frame = 0
Match: A0A6I9SJ69 ((DNA mismatch repair protein MSH1, mitochondrial {ECO:0000313|RefSeq:XP_011069365.1}))
HSP 1 Score: 1737.24 bits (4498), Expect = 0.000e+0
Identity = 832/1135 (73.30%), Postives = 963/1135 (84.85%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLHSRPFASSPYN-IEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQFDKGGS---------MKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCLQHETTVELSTSDKNRIFHKAY----EQSAGEKSACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDI 1121
MYW TA++ V PR RSL+ LL+PPLH S+P I + N I KE+K +K + HK+ + ++++KDY++++WWKE+MQMCRK S+V L+ RLT+SNLLG+D L+NGSLKEG++NWE+LQFKS+FPRE+LLCRVGDFYEAIG DAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR RK RFISGHAHPG+PYVFGLV DD DLDFPEPMPVVG+SRSAKGYC++SVLETMKTYSAEDGLTEEA+VTKLRTC+ HHLFLH SLKHNSSGT RWGEFGEGGLLWGECNAR FEWF+G+PVNEL+ KVKELYGL+ ++TFRNVTVAS NRP LHLGTATQIGA+ TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+YEIASTIQ CK MS+I CS+PEFTCV AKLVKLLESKE NHIEFCKIK+VLD+++Q++ NSEL+EILKLL+DPTW ATGL ++ E LV E + VS RIGEIISLDG+NDQ+I S+ IP++FFE +ESSWKGRVKRIHL E F EV+ AAEALS+A+ EDF+PI+SRI+A+TAPLGGP+GEILYAREH AVWFKGKRFAPSVWAGTPGEEQIKQLRPA+DSKGKKVGEEWFTT KVE AL RYHEAG +AK KVLELLRGLSAELQ KIN+LVFAS+LLVIAKALF HVSEGRRRKWVFP L+Q + + MK+ GLSPYWFDAA+G AV N VDM+SLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSPADGKSSFQ+EMSE+RSII+ A+S+SLVL+DEICRGTETAKGTCIAGS+IETLD I CLGIVSTHLHGIFDLPL K V KAM TE ID + PTW+L DGIC+ESLAF+TAQREGV E +I+RA ELY SVYA S H++ ++ TS HK+ +S EK SV+ N DVL +EVESAV ICQ QL+D KK ++ + SA++CVLI A+EQPPP T+G S VYV+LRPD++LY+GETDDL+ RVRAHR KEG+QNASFLY LVPGKS+ACQLETLLINQLP +GF LTNLADG+HRNFGTSDI
Sbjct: 46 MYWVTARNAVGFIPRWRSLSFLLKPPLHRSSSPSAPLPLIRRSNHIFCFKERKLY---VKPSKKHKQSKIAVEDKDYAHVIWWKEKMQMCRKPSSVLLVKRLTFSNLLGVDTTLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEAIGTDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARTRKSRFISGHAHPGSPYVFGLVGDDHDLDFPEPMPVVGISRSAKGYCMVSVLETMKTYSAEDGLTEEALVTKLRTCRCHHLFLHASLKHNSSGTCRWGEFGEGGLLWGECNARQFEWFDGNPVNELLKKVKELYGLEDDITFRNVTVASENRPSPLHLGTATQIGALPTEGIPCLLKVLLPSNCTGLPIMYVRDLLLNPPAYEIASTIQEACKLMSNITCSVPEFTCVPSAKLVKLLESKETNHIEFCKIKSVLDDILQLYTNSELNEILKLLMDPTWVATGLKVELETLVNECKSVSRRIGEIISLDGENDQKITSHPIIPNEFFEDMESSWKGRVKRIHLEEEFAEVDAAAEALSVAIEEDFLPIISRIRATTAPLGGPKGEILYAREHEAVWFKGKRFAPSVWAGTPGEEQIKQLRPALDSKGKKVGEEWFTTMKVENALTRYHEAGDRAKTKVLELLRGLSAELQTKINILVFASMLLVIAKALFGHVSEGRRRKWVFPTLTQRQRSQNTGTLHGAEGMKITGLSPYWFDAAQGGAVRNDVDMKSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESAIIPHFDSIMLHMKSYDSPADGKSSFQVEMSEIRSIITRASSKSLVLIDEICRGTETAKGTCIAGSVIETLDAISCLGIVSTHLHGIFDLPLRMKSAVFKAMGTELIDNRTMPTWKLIDGICKESLAFETAQREGVPEELIQRAAELYISVYAKDSLRPHDSKLKHFTSP---TVHKSNAVTDRRSLPEKECSSVIQPVNTADVLHREVESAVISICQNQLIDLCKKNDLLKPSAIRCVLIGAKEQPPPSTIGVSGVYVMLRPDRKLYIGETDDLQGRVRAHRLKEGMQNASFLYFLVPGKSMACQLETLLINQLPVRGFHLTNLADGKHRNFGTSDI 1174
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H8T2 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1729.15 bits (4477), Expect = 0.000e+0
Identity = 835/1150 (72.61%), Postives = 968/1150 (84.17%), Query Frame = 0
Match: F6H8T2 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1729.15 bits (4477), Expect = 0.000e+0
Identity = 835/1150 (72.61%), Postives = 968/1150 (84.17%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLR-PPLHSRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQ---------FDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYA-------NYSCLQH---ETTVELSTSDKNRIFHKAYEQSAGEKSACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
MYW + K+VVVS PR SLALLLR P F SS ++Q + R L E++ L+G + +N L+ LDEKD S+I+WWKERMQMC+K STV L+ RL YSNLLG+D NL+NG+LKEG++NWEMLQFKS+FPRE+LLCRVGDFYEAIGIDAC+LVEYAGLNPFGGLRSDSIP+AGCPVMNLRQTLDDLTR+GYSVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSAKGY +I VLETMKT+S EDGLTEEA+VTKLRTC YHHL LH SL+ NSSGT RWGEFGEGGLLWGEC+AR FEWFEGDPV++L+ KVKELYG D +VTFRNVTV+S RPRSLHLGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+YEIAS IQA C+ M+++ CSIPEFTCVSPAKLVKLLE +EANHIEFC+IK+VLDE++QMH NS+L++ILKLL+DPTW ATGL IDF+ LV E E +S RIG++I LDG+NDQ+I + IP+DFFE +ES WKGRVKRIH+ EAF EVE+AAEALSLA++EDF+PI+SRIKA+TAPLGGP+GE++YAREH AVWFKGKRFAP WAGTPGEEQIKQLRPA+DSKG+KVG EWFTT KVE AL RYHEAG KAK +VLELLRGLSAELQ KIN+L+FAS+LLVIAKALFAHVSEGRRRKWVFP L + D MK+ GLSPYW D A+G+AV NTVDM+SLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSPADGKSSFQIEMSE+RSII+GATSRSLVL+DEICRGTETAKGTCIAGSI+ETLD IGCLGIVSTHLHGIF L L TK + KAM TEY+DG+ +PTW+L DGICRESLAF+TAQ+EG+ ETII+RAEELY S+++ N + L H +TTV S ++++ + G + C + STN+M+VL K+VESAVT +CQK+L + YK+KN S+L + CV I EQPPP T+GASSVYVL DK+LYVGETDDL RVRAHRSKEG+Q ASFLY +VPGKS+ACQLETLLINQLP +GFQL N ADG+HRNFGT D S+E VTLH+
Sbjct: 1 MYWLSTKNVVVSFPRFYSLALLLRSPACKYTSFRSSTLLLQQFEKSRCLNERRVLKGAGRMTKNVIGLQNELDEKDLSHIMWWKERMQMCKKPSTVHLVKRLIYSNLLGVDPNLKNGNLKEGTLNWEMLQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSIPRAGCPVMNLRQTLDDLTRSGYSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSAKGYSIILVLETMKTFSVEDGLTEEALVTKLRTCHYHHLLLHTSLRRNSSGTCRWGEFGEGGLLWGECSARHFEWFEGDPVSQLLFKVKELYGFDDQVTFRNVTVSSEKRPRSLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYEIASIIQATCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDEILQMHRNSDLNKILKLLMDPTWVATGLKIDFDTLVNECEWISARIGKMIFLDGENDQKISYHPIIPNDFFEDMESPWKGRVKRIHVEEAFAEVERAAEALSLAISEDFLPIISRIKATTAPLGGPKGEVVYAREHEAVWFKGKRFAPVAWAGTPGEEQIKQLRPAIDSKGRKVGLEWFTTVKVEDALTRYHEAGDKAKARVLELLRGLSAELQTKINILIFASMLLVIAKALFAHVSEGRRRKWVFPSLVELHRSKDMEPLDGANWMKITGLSPYWLDVAQGSAVHNTVDMKSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPADGKSSFQIEMSEMRSIITGATSRSLVLIDEICRGTETAKGTCIAGSIVETLDKIGCLGIVSTHLHGIFTLGLNTKNAICKAMGTEYVDGKTKPTWKLIDGICRESLAFETAQKEGIPETIIRRAEELYLSIHSKDLLSGRNETELGHFCLDTTVNTS----GEVYNQLSRITGG--TICPKIESTNEMEVLHKKVESAVTIVCQKKLKELYKQKNTSKLPEINCVAILPGEQPPPSTIGASSVYVLFSTDKKLYVGETDDLEGRVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLDHSVEVVTLHQ 1144
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P9EV40 ((DNA mismatch repair protein MSH1, mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_035547743.1}))
HSP 1 Score: 1727.99 bits (4474), Expect = 0.000e+0
Identity = 836/1141 (73.27%), Postives = 967/1141 (84.75%), Query Frame = 0
Match: A0A6P9EV40 ((DNA mismatch repair protein MSH1, mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_035547743.1}))
HSP 1 Score: 1727.99 bits (4474), Expect = 0.000e+0
Identity = 836/1141 (73.27%), Postives = 967/1141 (84.75%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLHS----RPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLS---------QFDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCLQHETTVELSTSDKNRIFHKAYEQSAGEKSACSVMAS--TNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENV 1126
MY ++VVVS PR SLALL R P S RP + PY + QI K K LR + K + K +L++KD S++LWWKER++MCRK STVQL+ RLTYSNLLGLDVNL+NGSLKEG++NWEMLQFKSRFPRE+LLCRVGDFYEAIGIDAC+LVEYAGLNPFGGLRS+SIP+AGCPV+NLRQTLDDLTRNGYSVCIVEEVQGPTQAR RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSA GYC+ VLETMKTYS+EDGLTEEA+V KLRTC+ HHLFLH SL++NSSGT RWGEFGEGGLLWGEC+AR FEWFEG+PVN+L++KVKELYGLD EVTFRNVTV+S NRP+ L LGTATQIGAI T+GIP L+KVLLPS+C GLPV YI+DLLLNPP+YEIAS IQ CK MS++ CSIPEFTCVS AKLVKLLE +EANHIEFC+IKNVLDE++ M+ NSEL EILKLL+DPTW ATGL IDFE LV E E S RIGE+ISLDG++DQ+I S S IP DFFE +ESSWKGRVKR H+ E FT+V++AA+ALSLAVTEDF+PI+ RIKA+TAPLGGP+GEILYAREH AVWFKGKRFAPSVWAGTPGEEQIK+L+PA DS+G+KVGEEWFTT VE AL RYHEAG+KAK KVLELLRGLS+ELQ+KIN+LVFAS+LLVIAKALFAHVSEGRRRKWVFP+L+ Q + MK+ GLSPYWF+ AEG+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPA SA IP FDSIMLH+KSYDSPADGKSSFQ+EMSE++SII+G T RSLVL+DEICRGTETAKGTCIAGSIIETLD IGCLGIVSTHLHGIF LPL TK TV+KAM T Y+DG+ +PTW+L +GICRESLAF+TA++EG+ ETII+RAE LY SVYA Q+ T +L +S ++ + QS+G + ++ N M VL KEVE+A+ ICQ++L +FYKKK +S+L+ V CVLI ARE+PPP T+G SSVYV+LRPDK++YVGETDDL RVRAHRSKE +QNASFLY +VPGKS+ACQLETLLINQLP++GFQLTN+ADG+HRNFGTS IS+E++
Sbjct: 1 MYRLATRNVVVSFPRWCSLALLRRSPARSFGAFRPSLTLPYRSRRLEQICCFKNHKVLRASSKTTKKSKASNDALNDKDLSHLLWWKERLEMCRKPSTVQLVKRLTYSNLLGLDVNLKNGSLKEGTLNWEMLQFKSRFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSESIPRAGCPVINLRQTLDDLTRNGYSVCIVEEVQGPTQARTRKSRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSASGYCINLVLETMKTYSSEDGLTEEAIVAKLRTCRCHHLFLHASLRNNSSGTCRWGEFGEGGLLWGECSARQFEWFEGNPVNDLLLKVKELYGLDDEVTFRNVTVSSENRPQPLTLGTATQIGAIPTDGIPCLLKVLLPSNCSGLPVLYIRDLLLNPPAYEIASAIQETCKLMSNVTCSIPEFTCVSSAKLVKLLEQREANHIEFCRIKNVLDEILNMYKNSELSEILKLLMDPTWVATGLKIDFETLVSECEGASYRIGEMISLDGESDQKISSSSVIPSDFFEDMESSWKGRVKRRHIEEEFTDVQRAADALSLAVTEDFLPIIFRIKATTAPLGGPKGEILYAREHEAVWFKGKRFAPSVWAGTPGEEQIKRLKPASDSRGRKVGEEWFTTMNVEDALTRYHEAGAKAKVKVLELLRGLSSELQSKINILVFASMLLVIAKALFAHVSEGRRRKWVFPILAGCNRLKDVKQLNGAYGMKITGLSPYWFNVAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAHSALIPQFDSIMLHMKSYDSPADGKSSFQVEMSEIQSIIAGTTKRSLVLIDEICRGTETAKGTCIAGSIIETLDKIGCLGIVSTHLHGIFTLPLITKNTVYKAMGTVYVDGKTKPTWKLIEGICRESLAFETAKKEGIPETIIQRAEGLYLSVYAKVLLEQNGTKPDLCSSMSANGSNEFHFQSSGTLEVATYNSAELANPMQVLQKEVENAIRVICQEKLNEFYKKKKVSDLAEVHCVLIGARERPPPSTIGVSSVYVMLRPDKKIYVGETDDLEGRVRAHRSKEAMQNASFLYFIVPGKSLACQLETLLINQLPNQGFQLTNVADGKHRNFGTS-ISIESM 1140
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A540NET3 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1726.45 bits (4470), Expect = 0.000e+0
Identity = 833/1141 (73.01%), Postives = 961/1141 (84.22%), Query Frame = 0
Match: A0A540NET3 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1726.45 bits (4470), Expect = 0.000e+0
Identity = 833/1141 (73.01%), Postives = 961/1141 (84.22%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLR-PPLHSRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQ---------FDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCL-QHETTVELSTSDKNRIFHKAYEQSAGEKSACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
MYW ++ V S PR LALLLR PP F SP I Q +IR K++K G+ K + L LDE+ SNILWWKERM+MCRK STV L+ RL YSNLLGLDVNL+NGSLKEG++NWE+LQFKS+FP E+LLCRVGDFYEA+GIDAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSA+GYC+ VLETMKTYS+EDGLTEEA+VTKLRTC+YHHLFLH SL+ N SGT RWGEFGEGGLLWGECN R FEWFEG+PV E++ KVK+LYGLD EVTFRNV+V S NRP L LGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+Y+I+STIQA C+ MS+I CSIPEFTCVSPAKLVKLLE +EANHIEFC+IKNVLDE++ M EL EIL+LL+DPTW ATGL IDFE LV E E S IGE+ISLDG++DQ+ S+ +P+DFFE +ESSWKGR+KR H+ EA EVEKAAEALSLAVTEDF+PI+SRIKA+TAPLGGP+GEILYAREH AVWFKGKRFAP+VW GTPGEEQIKQL+PA+DSKG+KVGEEWFTT KVE AL RYHEAG+KAK +VLELLRGLS++LQ KIN+LVF+S+LLVIAKALFAHVSEGRRRKWVFP L + + G MK+VGLSPYW D AEG+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESASIPHFDSIMLH+KSYDSPADGKSSFQ+EMSE+RSI++G T RSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGI+STHLHGIF LPL TK TV+KAM T Y+DGQ +PTW+L DGICRESLAF+TA+REG+ ETII RAE+LY SVYAN + +++T VE +S +++ S+ K +V STN+M+VL KEVESA+T ICQK L + YKKK SEL+ ++CVLI ARE PPP T+G S VYV+LRPDKRLYVG+TDDL RVRAHRSKE LQNA+FLY VPGKS+ACQLETLLINQLP++G+ L N+ADG+HRNFGTS++SL+ V + R
Sbjct: 1 MYWLATRNGVASFPRCCHLALLLRSPPRKCSSFIPSPPLIGQFRRIRCFKDQKVSGGSRKGTKKLNALNNFLDERALSNILWWKERMEMCRKPSTVLLVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPHEVLLCRVGDFYEALGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSARGYCINFVLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHTSLRSNFSGTCRWGEFGEGGLLWGECNGRHFEWFEGNPVTEILSKVKDLYGLDEEVTFRNVSVPSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYDISSTIQATCRLMSNITCSIPEFTCVSPAKLVKLLELREANHIEFCRIKNVLDEILHMQKAPELCEILQLLMDPTWVATGLKIDFETLVNECECTSDSIGEMISLDGEHDQKFSSFLVVPNDFFEDMESSWKGRIKRRHIEEAVAEVEKAAEALSLAVTEDFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKRFAPAVWGGTPGEEQIKQLKPALDSKGRKVGEEWFTTAKVEDALTRYHEAGAKAKTRVLELLRGLSSDLQVKINILVFSSMLLVIAKALFAHVSEGRRRKWVFPTLGESCRSRDVKPLNGGNGMKIVGLSPYWLDVAEGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESASIPHFDSIMLHMKSYDSPADGKSSFQVEMSEIRSIVTGTTKRSLVLVDEICRGTETAKGTCIAGSIVETLDAIGCLGIISTHLHGIFSLPLNTKNTVNKAMGTVYVDGQTKPTWKLMDGICRESLAFETAKREGIPETIIDRAEDLYHSVYANEVLIGKNDTKVEQLSSTGFSNSERSHPLSSSAKVE-AVTGSTNRMEVLQKEVESAMTLICQKMLTELYKKKKTSELTEIRCVLIGARELPPPSTIGLSCVYVILRPDKRLYVGQTDDLEGRVRAHRSKEELQNANFLYFTVPGKSLACQLETLLINQLPNQGYHLINVADGKHRNFGTSNLSLDGVAVCR 1140
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M5XM99 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1725.68 bits (4468), Expect = 0.000e+0
Identity = 832/1141 (72.92%), Postives = 965/1141 (84.57%), Query Frame = 0
Match: M5XM99 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1725.68 bits (4468), Expect = 0.000e+0
Identity = 832/1141 (72.92%), Postives = 965/1141 (84.57%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLH--SRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQ----------FDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCL-QHETTVELSTSDKNRIFHKAYEQSAGEK-SACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVT 1127
MYW ++ VVS PR R LALLLR P S F SP + Q +IR K++K LRG+ KA L LDE+ SNILWWKERM+MCRK STVQL+ RL YSNLLGLDVNL+NGSLKEG++NWE+LQFKS+FPRE+LLCRVGDFYEA+GIDAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+S SA+GYC+ VLETMKTYS+EDGLTEEA+VTKLRTC+YHHLFLH SL+ N SGT RWGEFGEGGLLWGEC+ R FEWFEG+PV +L+ KVK+LYGLD +VTFRNV+V+S NRP L LGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+Y+I+STIQA C+ MS I CSIPEFTCVSPAKLVKLLE +EANHIEFC+IKNVLDE++QM EL EIL+LL+DPTW ATGL IDFE LV E E SGRIGE+ISLD ++DQ++ S+ +P +FFE +ESSWK R+KRIH+ EAF EVEKAAEALSLAVTEDFVPILSRIKA+TAPLGGP+GEILYAREH AVWFKGKRF P+VWAGTPGE+QIKQL+PA+DSKG+KVGEEWFTT VE AL RYHEAG+KAK +VLELLRGLS++LQAKIN+LVF+S+LLVIA+ALFAHVSEGRRRKWVFP L + + MK+VGLSPYW D AEG+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSP+DGKSSFQ+EMSE+RSI+SGAT RSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGI+STHLHGIF LPL TK TV+KAM T Y+DGQ +PTW+L DGICRESLAF+TA++EG+ E II+RAE+LY S YAN L ++ T +E S K++ QS+ +K A STN+M+VL KEVESAV IC+K L++ YK++ SE++ + CV I AREQPPP T+G S VYV+LRPD+RLYVG+TDDL RVRAHRSKEG+QNA+FLY VPGKS+ACQLETLLINQLP +GF LTN+ADG+HRNFGTS+++L+ VT
Sbjct: 1 MYWLATRNGVVSLPRCRHLALLLRSPSRKCSSSFIPSPPLLGQFRRIRCFKDQKVLRGSRKATNKLNALNNFLDERVLSNILWWKERMEMCRKPSTVQLVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEALGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISHSARGYCINFVLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHMSLRSNFSGTCRWGEFGEGGLLWGECSGRHFEWFEGNPVIDLLSKVKDLYGLDEDVTFRNVSVSSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYDISSTIQATCRLMSDITCSIPEFTCVSPAKLVKLLELREANHIEFCRIKNVLDEILQMRKTPELCEILQLLMDPTWVATGLKIDFETLVNECESTSGRIGEMISLDYEHDQKLSSFPIVPSEFFEDMESSWKRRIKRIHIEEAFAEVEKAAEALSLAVTEDFVPILSRIKATTAPLGGPKGEILYAREHEAVWFKGKRFVPAVWAGTPGEKQIKQLKPALDSKGRKVGEEWFTTMNVEDALTRYHEAGAKAKTRVLELLRGLSSDLQAKINILVFSSMLLVIARALFAHVSEGRRRKWVFPTLGESYRSKVDVKPVNGENGMKIVGLSPYWLDVAEGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPSDGKSSFQVEMSEIRSIVSGATKRSLVLVDEICRGTETAKGTCIAGSIVETLDTIGCLGIISTHLHGIFSLPLNTKNTVYKAMGTVYVDGQTKPTWKLMDGICRESLAFETAKKEGIPEIIIERAEDLYHSAYANEVLLGKNGTKLEQFCSTGFSSSDKSHPQSSSDKVEAVHKTGSTNRMEVLQKEVESAVIVICRKMLIELYKEEKTSEVTDIHCVPIGAREQPPPSTIGVSCVYVILRPDRRLYVGQTDDLEGRVRAHRSKEGMQNANFLYFTVPGKSLACQLETLLINQLPYQGFHLTNVADGKHRNFGTSNLALDGVT 1141
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251QSX0 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1725.29 bits (4467), Expect = 0.000e+0
Identity = 832/1143 (72.79%), Postives = 967/1143 (84.60%), Query Frame = 0
Match: A0A251QSX0 (DNA_MISMATCH_REPAIR_2 domain-containing protein {ECO:0000259|PROSITE:PS00486})
HSP 1 Score: 1725.29 bits (4467), Expect = 0.000e+0
Identity = 832/1143 (72.79%), Postives = 967/1143 (84.60%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLH--SRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQ---------FDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCL-QHETTVELSTSDKNRIFHKAYEQSAGEK-SACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
MYW ++ VVS PR R LALLLR P S F SP + Q +IR K++K LRG+ KA L LDE+ SNILWWKERM+MCRK STVQL+ RL YSNLLGLDVNL+NGSLKEG++NWE+LQFKS+FPRE+LLCRVGDFYEA+GIDAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+S SA+GYC+ VLETMKTYS+EDGLTEEA+VTKLRTC+YHHLFLH SL+ N SGT RWGEFGEGGLLWGEC+ R FEWFEG+PV +L+ KVK+LYGLD +VTFRNV+V+S NRP L LGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+Y+I+STIQA C+ MS I CSIPEFTCVSPAKLVKLLE +EANHIEFC+IKNVLDE++QM EL EIL+LL+DPTW ATGL IDFE LV E E SGRIGE+ISLD ++DQ++ S+ +P +FFE +ESSWK R+KRIH+ EAF EVEKAAEALSLAVTEDFVPILSRIKA+TAPLGGP+GEILYAREH AVWFKGKRF P+VWAGTPGE+QIKQL+PA+DSKG+KVGEEWFTT VE AL RYHEAG+KAK +VLELLRGLS++LQAKIN+LVF+S+LLVIA+ALFAHVSEGRRRKWVFP L + + MK+VGLSPYW D AEG+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSP+DGKSSFQ+EMSE+RSI+SGAT RSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGI+STHLHGIF LPL TK TV+KAM T Y+DGQ +PTW+L DGICRESLAF+TA++EG+ E II+RAE+LY S YAN L ++ T +E S K++ QS+ +K A STN+M+VL KEVESAV IC+K L++ YK++ SE++ + CV I AREQPPP T+G S VYV+LRPD+RLYVG+TDDL RVRAHRSKEG+QNA+FLY VPGKS+ACQLETLLINQLP +GF LTN+ADG+HRNFGTS+++L+ V++ R
Sbjct: 1 MYWLATRNGVVSLPRCRHLALLLRSPSRKCSSSFIPSPPLLGQFRRIRCFKDQKVLRGSRKATNKLNALNNFLDERVLSNILWWKERMEMCRKPSTVQLVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEALGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISHSARGYCINFVLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHMSLRSNFSGTCRWGEFGEGGLLWGECSGRHFEWFEGNPVIDLLSKVKDLYGLDEDVTFRNVSVSSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYDISSTIQATCRLMSDITCSIPEFTCVSPAKLVKLLELREANHIEFCRIKNVLDEILQMRKTPELCEILQLLMDPTWVATGLKIDFETLVNECESTSGRIGEMISLDYEHDQKLSSFPIVPSEFFEDMESSWKRRIKRIHIEEAFAEVEKAAEALSLAVTEDFVPILSRIKATTAPLGGPKGEILYAREHEAVWFKGKRFVPAVWAGTPGEKQIKQLKPALDSKGRKVGEEWFTTMNVEDALTRYHEAGAKAKTRVLELLRGLSSDLQAKINILVFSSMLLVIARALFAHVSEGRRRKWVFPTLGESYRSKDVKPVNGENGMKIVGLSPYWLDVAEGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPSDGKSSFQVEMSEIRSIVSGATKRSLVLVDEICRGTETAKGTCIAGSIVETLDTIGCLGIISTHLHGIFSLPLNTKNTVYKAMGTVYVDGQTKPTWKLMDGICRESLAFETAKKEGIPEIIIERAEDLYHSAYANEVLLGKNGTKLEQFCSTGFSSSDKSHPQSSSDKVEAVHKTGSTNRMEVLQKEVESAVIVICRKMLIELYKEEKTSEVTDIHCVPIGAREQPPPSTIGVSCVYVILRPDRRLYVGQTDDLEGRVRAHRSKEGMQNANFLYFTVPGKSLACQLETLLINQLPYQGFHLTNVADGKHRNFGTSNLALDGVSVCR 1143
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4GBR2 ((Full=PREDICTED: DNA {ECO:0000313|EMBL:VVA37028.1}))
HSP 1 Score: 1724.91 bits (4466), Expect = 0.000e+0
Identity = 832/1143 (72.79%), Postives = 966/1143 (84.51%), Query Frame = 0
Match: A0A5E4GBR2 ((Full=PREDICTED: DNA {ECO:0000313|EMBL:VVA37028.1}))
HSP 1 Score: 1724.91 bits (4466), Expect = 0.000e+0
Identity = 832/1143 (72.79%), Postives = 966/1143 (84.51%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLRPPLH--SRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQ---------FDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCL-QHETTVELSTSDKNRIFHKAYEQSAGEK-SACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
MYW ++ VVS PR LALLLR P S F SP + Q +IR K++K LRG+ KA L LDE+ SNILWWKERM+MCRK STVQL+ RL YSNLLGLDVNL+NGSLKEG++NWE+LQFKS+FPRE+LLCRVGDFYEA+GIDAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSA+GYC+ VLETMKTYS+EDGLTEEA+VTKLRTC+YHHLFLH SL+ N SGT RWGEFGEGGLLWGEC+ R FEWFEG+PV +L+ KVK+LYGLD +VTFRNV+V+S NRP L LGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+Y+I+STIQA C+ MS I CSIPEFTCVSPAKLVKLLE +EANHIEFC+IKNVLDE++QM EL EIL+LL+DPTW ATGL IDFE LV E E SGRIGE+ISLD ++DQ++ S+ +P +FFE +ESSWKGR+KRIH+ EAF EVEKAAEALSLAVTEDFVPILSRIKA+TAPLGGP+GEILYAREH AVWFKGKRF P+VWAGTPGE+QIKQL+PA+DSKG+KVGEEWFTT VE AL RYHEAG+KAK +VLELLRGLS++LQAKIN+LVF+S+LLVIA+ALFAHVSEGRRRKWVFP L + + MK+VGLSPYW D AEG+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSP+DGKSSFQ+EMSE+RSI+SGAT RSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGI+STHLHGIF LPL TK TV+KAM T Y+DGQ +PTW+L DGICRESLAF+TA++EG+ E II+RAE+LY S YAN L ++ T +E S K++ Q + +K A STN+M+VL KEVESAV IC+K L++ YK++ SE++ + CV I AREQPPP T+G S VYV+LRPD+RLYVG+TDDL RVRAHRSKEG+QNA+FLY VPGKS+ACQLETLLINQLP +GF LTN+ADG+HRNFGTS+++L+ V + R
Sbjct: 1 MYWLATRNGVVSLPRCCHLALLLRSPSRKCSSSFIPSPPLLGQFRRIRCFKDQKVLRGSRKATNKLNALNNFLDERVLSNILWWKERMEMCRKPSTVQLVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEALGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSARGYCINFVLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHMSLRSNFSGTCRWGEFGEGGLLWGECSGRHFEWFEGNPVIDLLSKVKDLYGLDEDVTFRNVSVSSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYDISSTIQATCRLMSDITCSIPEFTCVSPAKLVKLLELREANHIEFCRIKNVLDEILQMRKTPELCEILQLLMDPTWVATGLKIDFETLVNECESTSGRIGEMISLDYEHDQKLSSFPIVPSEFFEDMESSWKGRIKRIHIEEAFAEVEKAAEALSLAVTEDFVPILSRIKATTAPLGGPKGEILYAREHEAVWFKGKRFVPAVWAGTPGEKQIKQLKPALDSKGRKVGEEWFTTMNVEDALTRYHEAGAKAKTRVLELLRGLSSDLQAKINILVFSSMLLVIARALFAHVSEGRRRKWVFPTLGESYRSKDVKPVNGENGMKIVGLSPYWLDVAEGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPSDGKSSFQVEMSEIRSIVSGATKRSLVLVDEICRGTETAKGTCIAGSIVETLDTIGCLGIISTHLHGIFSLPLNTKNTVYKAMGTVYVDGQTKPTWKLMDGICRESLAFETAKKEGIPEIIIERAEDLYHSAYANEVLLGKNGTKLEQFCSTGFSSSDKSHPQLSSDKVEAVHKTGSTNRMEVLQKEVESAVIVICRKMLIELYKEEKTSEVTDIHCVPIGAREQPPPSTIGVSCVYVILRPDRRLYVGQTDDLEGRVRAHRSKEGMQNANFLYFTVPGKSLACQLETLLINQLPYQGFHLTNVADGKHRNFGTSNLALDGVAVCR 1143
BLAST of XM_017367431.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5TC65 ((DNA mismatch repair protein MSH1, mitochondrial isoform X1 {ECO:0000313|RefSeq:XP_021824749.1}))
HSP 1 Score: 1724.14 bits (4464), Expect = 0.000e+0
Identity = 831/1143 (72.70%), Postives = 967/1143 (84.60%), Query Frame = 0
Match: A0A6P5TC65 ((DNA mismatch repair protein MSH1, mitochondrial isoform X1 {ECO:0000313|RefSeq:XP_021824749.1}))
HSP 1 Score: 1724.14 bits (4464), Expect = 0.000e+0
Identity = 831/1143 (72.70%), Postives = 967/1143 (84.60%), Query Frame = 0
Query: 1 MYWATAKSVVVSAPRLRSLALLLR--PPLHSRPFASSPYNIEQCNQIRSLKEKKRLRGNIKALRNHKELEGSLDEKDYSNILWWKERMQMCRKSSTVQLISRLTYSNLLGLDVNLRNGSLKEGSINWEMLQFKSRFPREILLCRVGDFYEAIGIDACVLVEYAGLNPFGGLRSDSIPKAGCPVMNLRQTLDDLTRNGYSVCIVEEVQGPTQARARKRRFISGHAHPGNPYVFGLVEDDRDLDFPEPMPVVGVSRSAKGYCLISVLETMKTYSAEDGLTEEAVVTKLRTCQYHHLFLHRSLKHNSSGTSRWGEFGEGGLLWGECNARSFEWFEGDPVNELIIKVKELYGLDIEVTFRNVTVASVNRPRSLHLGTATQIGAISTEGIPSLIKVLLPSDCIGLPVSYIKDLLLNPPSYEIASTIQAICKHMSSIPCSIPEFTCVSPAKLVKLLESKEANHIEFCKIKNVLDEVIQMHGNSELHEILKLLIDPTWAATGLNIDFEKLVKESEMVSGRIGEIISLDGDNDQEICSYSAIPDDFFEMLESSWKGRVKRIHLNEAFTEVEKAAEALSLAVTEDFVPILSRIKASTAPLGGPRGEILYAREHGAVWFKGKRFAPSVWAGTPGEEQIKQLRPAVDSKGKKVGEEWFTTTKVEVALARYHEAGSKAKEKVLELLRGLSAELQAKINVLVFASVLLVIAKALFAHVSEGRRRKWVFPVLSQ---------FDKGGSMKLVGLSPYWFDAAEGNAVLNTVDMQSLFILTGPNGGGKSSLLRSICAASLLGICGFMVPAESASIPHFDSIMLHLKSYDSPADGKSSFQIEMSEVRSIISGATSRSLVLVDEICRGTETAKGTCIAGSIIETLDFIGCLGIVSTHLHGIFDLPLTTKKTVHKAMETEYIDGQPRPTWRLTDGICRESLAFQTAQREGVQETIIKRAEELYSSVYANYSCL-QHETTVELSTSDKNRIFHKAYEQ-SAGEKSACSVMASTNQMDVLWKEVESAVTKICQKQLLDFYKKKNISELSAVKCVLIAAREQPPPLTVGASSVYVLLRPDKRLYVGETDDLRSRVRAHRSKEGLQNASFLYLLVPGKSIACQLETLLINQLPSKGFQLTNLADGRHRNFGTSDISLENVTLHR 1130
MY ++ VVS PR LALLLR P S F SP + Q +IR K++K LRG+ KA L LDE+ SNILWWKERM+MCRK STVQL+ RL YSNLLGLDVNL+NGSLKEG++NWE+LQFKS+FPRE+LLCRVGDFYEA+GIDAC+LVEYAGLNPFGGLRSDSIP+AGCPV+NLRQTLDDLTRNG+SVCIVEEVQGPTQAR+RK RFISGHAHPG+PYVFGLV D DLDFPEPMPVVG+SRSA+GYC+ VLETMKTY +EDGLTEEA+VTKLRTC+YHHLFLH SL+ N SGT RWGEFGEGGLLWGEC+ R FEWFEG+PV +L+ KVK+LYGLD +VTFRNV+++S NRP L LGTATQIGAI TEGIP L+KVLLPS+C GLP+ Y++DLLLNPP+Y+I+STIQA C+ MS I CSIPEFTCVSPAKLVKLLE +EANHIEFC+IKNVLDE++QMH EL EIL+LL+DPTW ATGL IDFE LV E E SGRIGE+ISLD + DQ++ S+ +P DFFE +ESSWKGR+KRIH+ EAF EVEKAAEALSLAVTEDFVPILSRIKA+TAPLGGP+GEILYAREH AVWFKGKRFAP+VWAGTPGE+QIKQL+PA+DSKG+KVGEEWFTT KVE AL RYHEAG++AK +VLELLRGLS++LQAKIN+L+F+S+LLVIAKALFAHVSEGRRRKWVFP L + + MK+VGLSPYW D AEG+AV NTVDMQSLF+LTGPNGGGKSSLLRSICAA+LLGICGFMVPAESA IPHFDSIMLH+KSYDSP+DGKSSFQ+EMSE+RSI+SGAT RSLVLVDEICRGTETAKGTCIAGSI+ETLD IGCLGI+STHLHGIF LPL TK TV+KAM T Y+DGQ +PTW+L DGICRESLAF+TA++EG+ E II+RAE+LY S YAN L ++ T +E S K++ Q S+G+ A STN+M+VL KEVESA+ ICQK L++ +K++ SE++ + CV I AREQPPP T+G S VYV+LRPD+RLYVG+TDDL RVRAHRSKEG+QN +FLY VPGKS+ACQLETLLINQLP++GF LTN+ADG+HRNFGTS+++L+ V + R
Sbjct: 1 MYRLATRNCVVSLPRCCHLALLLRSHPRKCSSSFIPSPPLLGQFRRIRCFKDQKVLRGSRKATNKLNALNNFLDERVLSNILWWKERMEMCRKPSTVQLVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEALGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSARGYCINFVLETMKTYLSEDGLTEEALVTKLRTCRYHHLFLHMSLRSNFSGTCRWGEFGEGGLLWGECSGRHFEWFEGNPVIDLLSKVKDLYGLDEDVTFRNVSMSSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYDISSTIQATCRLMSDITCSIPEFTCVSPAKLVKLLELREANHIEFCRIKNVLDEILQMHKTPELCEILQLLMDPTWVATGLKIDFETLVNECESTSGRIGEMISLDYERDQKLSSFPIVPSDFFEDMESSWKGRIKRIHIEEAFAEVEKAAEALSLAVTEDFVPILSRIKATTAPLGGPKGEILYAREHEAVWFKGKRFAPAVWAGTPGEKQIKQLKPALDSKGRKVGEEWFTTMKVEDALTRYHEAGARAKTRVLELLRGLSSDLQAKINILIFSSMLLVIAKALFAHVSEGRRRKWVFPTLGESYRSKDVKPVNGENGMKIVGLSPYWLDVAEGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPSDGKSSFQVEMSEIRSIVSGATKRSLVLVDEICRGTETAKGTCIAGSIVETLDTIGCLGIISTHLHGIFSLPLNTKNTVYKAMGTVYVDGQTKPTWKLMDGICRESLAFETAKKEGIPEIIIERAEDLYHSAYANEVLLGKNGTKLEQFCSTGFSSSDKSHPQSSSGKVEAVHKTGSTNRMEVLQKEVESAIIVICQKMLIELFKEEKTSEITDIHCVPIGAREQPPPSTIGVSCVYVILRPDRRLYVGQTDDLEGRVRAHRSKEGMQNTNFLYFTVPGKSLACQLETLLINQLPNQGFHLTNVADGKHRNFGTSNLALDGVAVCR 1143
| Match Name | Stats | Description |
|---|---|---|
| A0A2R6S0L6 | E-Value: 0.000e+0, PID: 74.67 | (DNA mismatch repair protein {ECO:0000313|EMBL:PSS... [more] |
| A0A6J5VY44 | E-Value: 0.000e+0, PID: 73.00 | DNA_MISMATCH_REPAIR_2 domain-containing protein {E... [more] |
| A0A6I9SJ69 | E-Value: 0.000e+0, PID: 73.30 | (DNA mismatch repair protein MSH1, mitochondrial {... [more] |
| F6H8T2 | E-Value: 0.000e+0, PID: 72.61 | DNA_MISMATCH_REPAIR_2 domain-containing protein {E... [more] |
| A0A6P9EV40 | E-Value: 0.000e+0, PID: 73.27 | (DNA mismatch repair protein MSH1, mitochondrial-l... [more] |
| A0A540NET3 | E-Value: 0.000e+0, PID: 73.01 | DNA_MISMATCH_REPAIR_2 domain-containing protein {E... [more] |
| M5XM99 | E-Value: 0.000e+0, PID: 72.92 | DNA_MISMATCH_REPAIR_2 domain-containing protein {E... [more] |
| A0A251QSX0 | E-Value: 0.000e+0, PID: 72.79 | DNA_MISMATCH_REPAIR_2 domain-containing protein {E... [more] |
| A0A5E4GBR2 | E-Value: 0.000e+0, PID: 72.79 | (Full=PREDICTED: DNA {ECO:0000313|EMBL:VVA37028.1}... [more] |
| A0A6P5TC65 | E-Value: 0.000e+0, PID: 72.70 | (DNA mismatch repair protein MSH1, mitochondrial i... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |