Resource Type:
Polypeptide
Name:
XM_017367023.1
Identifier:
XM_017367023.1-protein
Sequence:
MGAEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYY
GISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRY
WTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALF
YGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFL
GTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAG
SPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSL
RFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQI
NTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRK
WTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQ
VPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSL
GIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLN
FIFFLVVSRYYVYKAEVSDSMEVLGEELRESRRSEQESSRRSRQ
Sequence Length:
594
Sequence Checksum:
9e3a131e51e4fb393ef6d9191bf4d8cd
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367023.1, derives from mRNA, XM_017367023.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
back to top
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C0U9 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548859.1}))
HSP 1 Score: 1031.55 bits (2666), Expect = 0.000e+0
Identity = 481/580 (82.93%), Postives = 537/580 (92.59%), Query Frame = 0
Match: A0A5J5C0U9 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548859.1}))
HSP 1 Score: 1031.55 bits (2666), Expect = 0.000e+0
Identity = 481/580 (82.93%), Postives = 537/580 (92.59%), Query Frame = 0
Query: 3 AEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELRESR 582
A E G DDYTQDGTVDL+GNPV +S+RGGWTACSFVVVYE+FERMAYYGIS+NLI+YLT KLHQGTVT++NNVTNWVGTIWMTP+LGAY+ADAHLGRYWTF+IAS IYL GM +LTL VS+PGL+PP+C D ++++C+KASTLQLA+FYGALYTLTIGTGGTKPNISTIGADQFDDF+ KEKAHKLSFFNWWMFSIF GTLFANTVLVYIQDNVGW +GYGLPTLGLA+SIMIF+ GTRFYRH+VPAGSPFTRM +VIVAAL+KW VP+PSDPKEFYEL+LE Y+KKGKFRIDSTP+LRF NKACVKTG T+ W L VTQVEETKQMLRMIPIL ATF+PS MIAQINTLFVKQGTTL+R IGSFKIPPASLAGFVTLSMLICVVLYDR FV V+++WT NPRGIT+LQRMGIGM HI+IMTVASL+ER+RLSVAKDHGVVE+G+QVPLTIF+LLPQF+LMGTADAFLEVAKIEFFYDQAPESMKSLGTSY+ T+LG+G+F SSFLL+TVSHITKK+ H GWILNNLN S LDYYYAFFA+LN LNFIFFLV+ ++YVYKAEVSDSMEVL EEL SR
Sbjct: 2 AVEEGLDDYTQDGTVDLKGNPVLRSKRGGWTACSFVVVYEVFERMAYYGISANLIIYLTTKLHQGTVTSANNVTNWVGTIWMTPILGAYVADAHLGRYWTFIIASTIYLFGMSLLTLAVSVPGLRPPRCTDVNVADCKKASTLQLAVFYGALYTLTIGTGGTKPNISTIGADQFDDFESKEKAHKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWAVGYGLPTLGLAISIMIFVAGTRFYRHRVPAGSPFTRMGRVIVAALRKWRVPIPSDPKEFYELDLEEYSKKGKFRIDSTPTLRFLNKACVKTGSTNPWMLCCVTQVEETKQMLRMIPILIATFVPSIMIAQINTLFVKQGTTLQRQIGSFKIPPASLAGFVTLSMLICVVLYDRYFVTVMKRWTKNPRGITLLQRMGIGMVLHIIIMTVASLVERHRLSVAKDHGVVENGKQVPLTIFILLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYAMTTLGVGNFLSSFLLSTVSHITKKHGHHGWILNNLNDSRLDYYYAFFAVLNVLNFIFFLVMIKFYVYKAEVSDSMEVLREELEGSR 581
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7SZL3 ((Uncharacterized protein {ECO:0000313|EMBL:CBI23690.3}))
HSP 1 Score: 1018.07 bits (2631), Expect = 0.000e+0
Identity = 481/588 (81.80%), Postives = 532/588 (90.48%), Query Frame = 0
Match: D7SZL3 ((Uncharacterized protein {ECO:0000313|EMBL:CBI23690.3}))
HSP 1 Score: 1018.07 bits (2631), Expect = 0.000e+0
Identity = 481/588 (81.80%), Postives = 532/588 (90.48%), Query Frame = 0
Query: 5 ETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELR--ESRRSEQESSR 590
E G DDYTQDGTVDL+GNPVR+S+RGGWTACSFVVVYE+FERMAYYGIS+NL++YLT+KLHQGTVT+SNNVTNWVGT+WMTPVLGAYIADA+LGRY TFVIASAIYL GM +LT+ VS+PGLKPP+CV D+++C+KASTLQLA+F+GALYTL +GTGGTKPNISTIGADQFDDFDPKEK HKLSFFNWWMFSIF GTLFANT+LVYIQDNVGWTLGYGLPT GLA+SI+IFL GT FYRH+VP+GSPFTRM KVI+AAL+KW PVP+DPKE YEL+LE Y KKGKFRIDSTP+LRF NKACVKTG D W L +VTQVEETKQMLRMIPIL ATF+PSTMIAQINTLFVKQGTTL+R IGSF IPPASL GFVTLSML+ VVLYDR FV + R+ T NPRGIT+LQRMGIG+ FHI IM VASL+ER RLSVAKDHGVVESG QVPL+I +LLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYS TSLGIG+F SSFLLTTVSHITKK+ H GWILNNLNASHLDYYYAFFAILNFLNFIFF+VV++YYVYKAEV+DSMEVL +LR + QE SR
Sbjct: 4 ENGVDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISTNLVIYLTKKLHQGTVTSSNNVTNWVGTVWMTPVLGAYIADAYLGRYLTFVIASAIYLAGMSLLTVAVSVPGLKPPRCVATDMADCKKASTLQLAVFFGALYTLAVGTGGTKPNISTIGADQFDDFDPKEKGHKLSFFNWWMFSIFFGTLFANTILVYIQDNVGWTLGYGLPTAGLAISIVIFLAGTPFYRHRVPSGSPFTRMAKVIIAALRKWKTPVPTDPKELYELDLEEYAKKGKFRIDSTPTLRFLNKACVKTGSKDPWMLCSVTQVEETKQMLRMIPILIATFVPSTMIAQINTLFVKQGTTLDRGIGSFNIPPASLTGFVTLSMLVSVVLYDRFFVTITRRLTKNPRGITLLQRMGIGLVFHIFIMMVASLVERRRLSVAKDHGVVESGGQVPLSILILLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTSLGIGNFLSSFLLTTVSHITKKHGHHGWILNNLNASHLDYYYAFFAILNFLNFIFFIVVTKYYVYKAEVTDSMEVLEGQLRGLTPAVTNQEESR 591
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5BCA6 ((Uncharacterized protein {ECO:0000313|EMBL:CAN63331.1}))
HSP 1 Score: 1014.99 bits (2623), Expect = 0.000e+0
Identity = 476/570 (83.51%), Postives = 526/570 (92.28%), Query Frame = 0
Match: A5BCA6 ((Uncharacterized protein {ECO:0000313|EMBL:CAN63331.1}))
HSP 1 Score: 1014.99 bits (2623), Expect = 0.000e+0
Identity = 476/570 (83.51%), Postives = 526/570 (92.28%), Query Frame = 0
Query: 5 ETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVL 574
E G DDYTQDGTVDL+GNPVR+S+RGGWTACSFVVVYE+FERMAYYGIS+NL++YLT+KLHQGTVT+SNNVTNWVGT+WMTPVLGAYIADA+LGRY TFVIASAIYL GM +LT+ VS+PGLKPP+CV D+++C+KASTLQLA+F+GALYTL +GTGGTKPNISTIGADQFDDFDPKEK HKLSFFNWWMFSIF GTLFANT+LVYIQDNVGWTLGYGLPT GLA+SIMIFL GT FYRH+VP+GSPFTRM KVI+AAL+KW PVP+DPKE YEL+LE Y KKGKFRIDSTP+LRF NKACVKTG D W L +VTQVEETKQMLRMIPIL ATF+PSTMIAQINTLFVKQGTTL+R IGSF IPPASL GFVT+SML+ VVLYDR FV ++R+ T NPRGIT+LQRMGIG+ FHIVIM VASL+ER RLSVAKDHGVVESG QVPL+I +LLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYS TSLGIG+F SSFLLTTVSHITKK+ H GWILNNLNASHLDYYYAFFAILNFLNFIFF+VV++YYVYKAEV+DSMEVL
Sbjct: 4 ENGVDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISTNLVIYLTKKLHQGTVTSSNNVTNWVGTVWMTPVLGAYIADAYLGRYLTFVIASAIYLAGMSLLTVAVSVPGLKPPRCVATDMADCKKASTLQLAVFFGALYTLAVGTGGTKPNISTIGADQFDDFDPKEKGHKLSFFNWWMFSIFFGTLFANTILVYIQDNVGWTLGYGLPTAGLAISIMIFLAGTPFYRHRVPSGSPFTRMAKVIIAALRKWKTPVPTDPKELYELDLEEYGKKGKFRIDSTPTLRFLNKACVKTGSKDPWMLCSVTQVEETKQMLRMIPILIATFVPSTMIAQINTLFVKQGTTLDRGIGSFNIPPASLTGFVTISMLVSVVLYDRFFVTIMRRLTKNPRGITLLQRMGIGLVFHIVIMMVASLVERRRLSVAKDHGVVESGGQVPLSILILLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTSLGIGNFLSSFLLTTVSHITKKHGHHGWILNNLNASHLDYYYAFFAILNFLNFIFFIVVTKYYVYKAEVTDSMEVL 573
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6R8N5 ((Protein NRT1/ PTR FAMILY 5.2 like {ECO:0000313|EMBL:PSS23908.1}))
HSP 1 Score: 1013.45 bits (2619), Expect = 0.000e+0
Identity = 474/589 (80.48%), Postives = 535/589 (90.83%), Query Frame = 0
Match: A0A2R6R8N5 ((Protein NRT1/ PTR FAMILY 5.2 like {ECO:0000313|EMBL:PSS23908.1}))
HSP 1 Score: 1013.45 bits (2619), Expect = 0.000e+0
Identity = 474/589 (80.48%), Postives = 535/589 (90.83%), Query Frame = 0
Query: 1 MGAEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKN-EHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELRESRRSEQES 588
M EE G DDYTQDGTVDL+GNPVR+SQRGGW ACSFVVVYE+FERMAYYGISSNL +YLT+KLH+GTVTASNNVTNWVGTIWMTP++GAYIADA LGRYWTF+IAS IYL+GM +LTL VS+PGLKPP+C DPD +NC+KASTL+LA+FYGALYTL +GTGGTKPNISTIGADQFDDF+PKEKA KLSFFNWWMFSIF GTLFANTVLVYIQDNVGWTLGYGLPT GLAVSI+IFL GT FYRH+ P GSPFTRM KVIVA+L+KW VP+PSDPKE YEL+LE Y+KKGKFRIDSTP+LR NKACVKTG T W L VTQVEETKQMLRMIPIL ATF+PSTMIAQINTLFVKQGTTL+R+IG F IPPASLAGFVT+SML+CVV+YDR FVK++++WT NPRG+T+LQRMGIG+ FHI+IMT+ASL+ERYRLSVAK HG+V+SG QVPLTIF+LLPQF+LMGTADAFLEVAKIEFFYDQAPE MKSLGTSYS TSLG+G+F SSFLL+TV ITKK+ +++GWI NNLNASHLDYYYAFFAILN LNFIFFLV+++YYVYKAEVSDSMEVL +ELR + + + S
Sbjct: 1 MRGEEEGVDDYTQDGTVDLKGNPVRRSQRGGWKACSFVVVYEVFERMAYYGISSNLFIYLTKKLHEGTVTASNNVTNWVGTIWMTPIMGAYIADACLGRYWTFIIASGIYLSGMSLLTLAVSVPGLKPPRCTDPDPTNCKKASTLELAVFYGALYTLAVGTGGTKPNISTIGADQFDDFEPKEKAQKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWTLGYGLPTAGLAVSILIFLAGTPFYRHRQPTGSPFTRMSKVIVASLRKWSVPIPSDPKELYELDLEEYSKKGKFRIDSTPTLRILNKACVKTGSTSPWMLCPVTQVEETKQMLRMIPILIATFVPSTMIAQINTLFVKQGTTLDRHIGGFHIPPASLAGFVTISMLVCVVIYDRYFVKIMKRWTKNPRGVTLLQRMGIGIVFHIIIMTIASLIERYRLSVAKSHGLVKSGGQVPLTIFILLPQFVLMGTADAFLEVAKIEFFYDQAPEIMKSLGTSYSMTSLGVGNFLSSFLLSTVHRITKKHGDNQGWIRNNLNASHLDYYYAFFAILNLLNFIFFLVMTKYYVYKAEVSDSMEVLEQELRGATSTVEAS 589
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZT67 ((Uncharacterized protein {ECO:0000313|EMBL:MPA46736.1}))
HSP 1 Score: 1009.21 bits (2608), Expect = 0.000e+0
Identity = 475/591 (80.37%), Postives = 534/591 (90.36%), Query Frame = 0
Match: A0A5B6ZT67 ((Uncharacterized protein {ECO:0000313|EMBL:MPA46736.1}))
HSP 1 Score: 1009.21 bits (2608), Expect = 0.000e+0
Identity = 475/591 (80.37%), Postives = 534/591 (90.36%), Query Frame = 0
Query: 3 AEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKK---NEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELRESRRSEQESSR 590
A E G DD+TQDGTVDL+GN V +S+RGGWTACSFVVVYE+FERMAYYGISSNLILYLT+KLHQGTVT++NNVTNWVGTIWMTP+LGAY+ADAHLGRYWTFVIA AIYL+GM +LTL VS+PGLKPP CVD + +C+KASTLQLA+FYGALYTL IGTGGTKPNISTIGADQFDDF+PKEKAHKLSFFNWWMFSIF GTLFANT+LVYIQDNVGWTLGYGLPTLGLA+SI+IFL GT FYRH+VP GSPFTRM +VIVAAL+KW VP+P+D KE YEL+LE YTKKGKFRIDSTP+LRF NKA VKTG T W L +VTQVEETKQMLRMIPIL +TF+PS M+AQINTLFVKQGTTL+R+IGSFKIPPASLAGFVT+SML+CVVLYDR FVK++++WT NPRGIT+LQRMGIGM FH+ IM +ASL+ERYRL VAKDHGVVE+G QVPLTIF+LLPQF+LMGTADAFLEVAK+EFFYDQAPESMKSLGTSYSTT+L +G+F SSFLL+TVS+ITKK GWILNNLNASHLDYYYAFFA+LNFLN IFFLV+ RYYVYKAEVS SMEVL EEL S+ + S++
Sbjct: 2 AVEEGLDDFTQDGTVDLKGNAVLRSKRGGWTACSFVVVYEVFERMAYYGISSNLILYLTKKLHQGTVTSANNVTNWVGTIWMTPILGAYVADAHLGRYWTFVIACAIYLSGMSLLTLAVSVPGLKPPHCVDANAMDCKKASTLQLAVFYGALYTLAIGTGGTKPNISTIGADQFDDFEPKEKAHKLSFFNWWMFSIFFGTLFANTILVYIQDNVGWTLGYGLPTLGLAISILIFLAGTPFYRHRVPTGSPFTRMARVIVAALRKWRVPIPTDSKELYELDLEEYTKKGKFRIDSTPTLRFLNKASVKTGSTSPWMLCSVTQVEETKQMLRMIPILISTFVPSIMVAQINTLFVKQGTTLDRHIGSFKIPPASLAGFVTISMLVCVVLYDRFFVKIMKRWTKNPRGITLLQRMGIGMVFHVFIMIIASLIERYRLRVAKDHGVVENGNQVPLTIFILLPQFVLMGTADAFLEVAKLEFFYDQAPESMKSLGTSYSTTTLAVGNFLSSFLLSTVSNITKKHGHGHGHGWILNNLNASHLDYYYAFFAVLNFLNIIFFLVMIRYYVYKAEVSGSMEVLREELEGSKYRPRVSNQ 592
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834H665 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7146090.1}))
HSP 1 Score: 1006.9 bits (2602), Expect = 0.000e+0
Identity = 477/588 (81.12%), Postives = 531/588 (90.31%), Query Frame = 0
Match: A0A834H665 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7146090.1}))
HSP 1 Score: 1006.9 bits (2602), Expect = 0.000e+0
Identity = 477/588 (81.12%), Postives = 531/588 (90.31%), Query Frame = 0
Query: 1 MGAEETG--HDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELR-ESRRSE 585
MG EE G H DYT+DGTVDL+GNPVR+S+RGGW ACSFVVVYE+FERMAYYGISSNLILYLTRKLHQGTVTA+NNVTNWVGTIWMTP+LGAY+ADAHLGRYWTFVIAS IYL GM +LTL+VS+PGLKPP C DP NC+KASTLQLA+FYGALYTL +GTGGTKPNISTIGADQFD+F+PKEKAHKLSFFNWWMFSIF GTLFANTVLVYIQDNVGWTLGYGLPT GLAVSI+IFL G+ FYRHKVP+GSPFTRM KVIVAAL+KW VPVP+DPKE YEL+LE Y K G +RIDSTP+LRF NKACVKT T W L +VTQVEETKQMLRMIPIL ATFIPSTMIAQI TLFVKQGTTL+R IG F+IPPASLAGFVT+SML+CVVLYDR FVK++++WT NPRGIT+LQRMGIG+ HI+IM +ASL ERYRL VAKDHG+VESG QVPL+IF+LLPQF+LMGTADAFLEVAKIEFFYDQAPE MKSLGTSYS TSLG+G+F SSFLL+TVSHIT+++ WILNNLNASHLDYYYAFFAILNFLNF FFL+++++YVYKAEVS+SMEVL +ELR S RSE
Sbjct: 10 MGVEEGGVLHGDYTEDGTVDLKGNPVRRSKRGGWKACSFVVVYEVFERMAYYGISSNLILYLTRKLHQGTVTAANNVTNWVGTIWMTPILGAYVADAHLGRYWTFVIASGIYLAGMSLLTLSVSLPGLKPPHCPDPK--NCKKASTLQLAVFYGALYTLAVGTGGTKPNISTIGADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWTLGYGLPTAGLAVSILIFLVGSPFYRHKVPSGSPFTRMAKVIVAALRKWRVPVPTDPKELYELDLEKYNKNGVYRIDSTPTLRFLNKACVKTDSTTPWMLCSVTQVEETKQMLRMIPILMATFIPSTMIAQIGTLFVKQGTTLQRRIGGFEIPPASLAGFVTISMLVCVVLYDRYFVKIMKRWTKNPRGITLLQRMGIGVVLHILIMVIASLTERYRLRVAKDHGLVESGGQVPLSIFILLPQFVLMGTADAFLEVAKIEFFYDQAPEMMKSLGTSYSMTSLGVGNFISSFLLSTVSHITREHGRHEWILNNLNASHLDYYYAFFAILNFLNFGFFLLMTKFYVYKAEVSESMEVLAQELRGSSLRSE 595
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6RE66 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8076090.1}))
HSP 1 Score: 1004.59 bits (2596), Expect = 0.000e+0
Identity = 471/593 (79.43%), Postives = 530/593 (89.38%), Query Frame = 0
Match: A0A5N6RE66 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8076090.1}))
HSP 1 Score: 1004.59 bits (2596), Expect = 0.000e+0
Identity = 471/593 (79.43%), Postives = 530/593 (89.38%), Query Frame = 0
Query: 1 MGAEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELR--ESRRSEQESSRR 591
M EE DDYT+DGTVDLRGNPVR+S+RGGWTACSF+VVYE+FERMAYYGISSNLILYLT+KLHQGTVTASNNVTNWVGT+W+TP+LGAY+ADAHLGRYWTFVIA IY++GM VLTL VS+ LKPP C D +I NC+KASTLQLA+FYGALYTL +GTGGTKPNISTIGADQFDDF PKEK HKLSFFNWWMFSIF GTLFANTVLV+IQDNVGWTLGY LPTLGLA+SI IFL GT FYRHKVP GSPFTRM KVIVAA++KW V +P+DPKE YEL+LE Y KKGKFRIDSTP+LRF KA VKTG T+ W L +VTQVEETKQMLRMIPIL ATF+PSTMIAQ NTLFVKQGTTLER+IGSF+IPPASLAGF+T+SMLI VVLYDR VK +++WT NPRGIT+LQRMG+G+ HI+IMT+ASL ERYRLSVAK+HG+VE+G QVPLTIF+LLPQF+LMGTADAFLEVAKIEFFYDQAPESMKSLGTSYS T+LG+G+F SSFLL+TVSHITK++ H GWILNNLNASHLDYYYAFFA+LN LN +FFLVV ++YVYKAEVSDS++VL EEL+ + S QE SRR
Sbjct: 1 MATEEEALDDYTKDGTVDLRGNPVRRSKRGGWTACSFIVVYEVFERMAYYGISSNLILYLTKKLHQGTVTASNNVTNWVGTVWITPILGAYLADAHLGRYWTFVIACIIYISGMSVLTLAVSLSSLKPPSCSDANIENCKKASTLQLAVFYGALYTLALGTGGTKPNISTIGADQFDDFHPKEKGHKLSFFNWWMFSIFFGTLFANTVLVWIQDNVGWTLGYALPTLGLAISIAIFLAGTPFYRHKVPTGSPFTRMAKVIVAAIRKWRVRIPNDPKELYELDLEEYAKKGKFRIDSTPTLRFLTKASVKTGSTNPWMLCSVTQVEETKQMLRMIPILAATFVPSTMIAQTNTLFVKQGTTLERSIGSFEIPPASLAGFITISMLISVVLYDRFLVKFMQRWTKNPRGITLLQRMGVGLVIHIIIMTIASLTERYRLSVAKEHGLVENGGQVPLTIFILLPQFLLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSHITKEHGHHGWILNNLNASHLDYYYAFFAVLNVLNLVFFLVVIKFYVYKAEVSDSIQVLTEELKGMTVKVSNQEESRR 593
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5D3A616 ((Uncharacterized protein {ECO:0000313|EMBL:TYJ45343.1}))
HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0
Identity = 472/590 (80.00%), Postives = 530/590 (89.83%), Query Frame = 0
Match: A0A5D3A616 ((Uncharacterized protein {ECO:0000313|EMBL:TYJ45343.1}))
HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0
Identity = 472/590 (80.00%), Postives = 530/590 (89.83%), Query Frame = 0
Query: 3 AEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELRESR--RSEQESSR 590
A E G DDYTQDGTVDL+GNPVR+S+RGGWTACSFVVVYE+FERMAYYGISSNL+LYLTRKLHQGTV ++NNVTNWVGTIW+TP+LGAY+ADAHLGRYWTFV AS IY+TGM +LTL+VSIPGLKPP C +I +C+KASTLQLA F+GALYTL IGTGGTKPNISTIGADQFDDF PKEKA KLSFFNWWMFSIF GTLFANTVLVYIQDNVGWTLGYGLPTLGL +S+MIFL GT FYRH+VPAGSPFT+M VIVAA +KW VP+PSDPKE +EL+LE Y + GKF I STP+LRF NKA VKTG TD W LS VTQVEETKQMLRMIPIL ATF+PSTMIAQINTLF+KQGTTL+R+IG+FKIPPASLAGFVT+SML+CVVLYDR FV VIRKWTNNPRGIT+LQRMGIG+ H VIM VASL ERYRL+VAK HG+VE+G Q+PLTIF+LLPQF+LMGTADAFLEVAK+EFFYDQAPESMKSLGTSYS+TSLGIG+F SSFLL+TVS IT+++ H+GWILNNLN SHLDYYYAFFA+LNFLNFIFF+ + R+YVYKAEVSDSM VL EEL+ R S QE+++
Sbjct: 2 AVEEGIDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISSNLVLYLTRKLHQGTVKSANNVTNWVGTIWITPILGAYVADAHLGRYWTFVFASLIYVTGMSLLTLSVSIPGLKPPPCHQANIDDCKKASTLQLATFFGALYTLAIGTGGTKPNISTIGADQFDDFHPKEKASKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWTLGYGLPTLGLVISVMIFLAGTPFYRHRVPAGSPFTKMAMVIVAAARKWRVPLPSDPKELHELDLEEYARNGKFMIGSTPTLRFLNKAAVKTGSTDPWMLSAVTQVEETKQMLRMIPILIATFVPSTMIAQINTLFIKQGTTLDRHIGNFKIPPASLAGFVTISMLVCVVLYDRFFVPVIRKWTNNPRGITLLQRMGIGLVLHFVIMAVASLTERYRLNVAKQHGLVENGGQLPLTIFILLPQFVLMGTADAFLEVAKLEFFYDQAPESMKSLGTSYSSTSLGIGNFLSSFLLSTVSDITQRDGHEGWILNNLNKSHLDYYYAFFAVLNFLNFIFFMAMIRFYVYKAEVSDSMHVLTEELKVMRLKASNQEAAK 591
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P4P8H4 ((protein NRT1/ PTR FAMILY 5.2-like {ECO:0000313|RefSeq:XP_017631962.1}))
HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0
Identity = 472/590 (80.00%), Postives = 530/590 (89.83%), Query Frame = 0
Match: A0A6P4P8H4 ((protein NRT1/ PTR FAMILY 5.2-like {ECO:0000313|RefSeq:XP_017631962.1}))
HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0
Identity = 472/590 (80.00%), Postives = 530/590 (89.83%), Query Frame = 0
Query: 3 AEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELRESR--RSEQESSR 590
A E G DDYTQDGTVDL+GNPVR+S+RGGWTACSFVVVYE+FERMAYYGISSNL+LYLTRKLHQGTV ++NNVTNWVGTIW+TP+LGAY+ADAHLGRYWTFV AS IY+TGM +LTL+VSIPGLKPP C +I +C+KASTLQLA F+GALYTL IGTGGTKPNISTIGADQFDDF PKEKA KLSFFNWWMFSIF GTLFANTVLVYIQDNVGWTLGYGLPTLGL +S+MIFL GT FYRH+VPAGSPFT+M VIVAA +KW VP+PSDPKE +EL+LE Y + GKF I STP+LRF NKA VKTG TD W LS VTQVEETKQMLRMIPIL ATF+PSTMIAQINTLF+KQGTTL+R+IG+FKIPPASLAGFVT+SML+CVVLYDR FV VIRKWTNNPRGIT+LQRMGIG+ H VIM VASL ERYRL+VAK HG+VE+G Q+PLTIF+LLPQF+LMGTADAFLEVAK+EFFYDQAPESMKSLGTSYS+TSLGIG+F SSFLL+TVS IT+++ H+GWILNNLN SHLDYYYAFFA+LNFLNFIFF+ + R+YVYKAEVSDSM VL EEL+ R S QE+++
Sbjct: 2 AVEEGIDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISSNLVLYLTRKLHQGTVKSANNVTNWVGTIWITPILGAYVADAHLGRYWTFVFASLIYVTGMSLLTLSVSIPGLKPPPCHQANIDDCKKASTLQLATFFGALYTLAIGTGGTKPNISTIGADQFDDFHPKEKASKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWTLGYGLPTLGLVISVMIFLAGTPFYRHRVPAGSPFTKMAMVIVAATRKWRVPLPSDPKELHELDLEEYARNGKFMIGSTPTLRFLNKAAVKTGSTDPWMLSAVTQVEETKQMLRMIPILIATFVPSTMIAQINTLFIKQGTTLDRHIGNFKIPPASLAGFVTISMLVCVVLYDRFFVPVIRKWTNNPRGITLLQRMGIGLVLHFVIMAVASLTERYRLNVAKQHGLVENGGQLPLTIFILLPQFVLMGTADAFLEVAKLEFFYDQAPESMKSLGTSYSSTSLGIGNFLSSFLLSTVSDITQRDGHEGWILNNLNKSHLDYYYAFFAVLNFLNFIFFMAMIRFYVYKAEVSDSMHVLTEELKVMRLKASNQEAAK 591
BLAST of XM_017367023.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8M1T9 ((protein NRT1/ PTR FAMILY 5.2-like {ECO:0000313|RefSeq:XP_016719613.1}))
HSP 1 Score: 1003.43 bits (2593), Expect = 0.000e+0
Identity = 470/590 (79.66%), Postives = 531/590 (90.00%), Query Frame = 0
Match: A0A1U8M1T9 ((protein NRT1/ PTR FAMILY 5.2-like {ECO:0000313|RefSeq:XP_016719613.1}))
HSP 1 Score: 1003.43 bits (2593), Expect = 0.000e+0
Identity = 470/590 (79.66%), Postives = 531/590 (90.00%), Query Frame = 0
Query: 3 AEETGHDDYTQDGTVDLRGNPVRKSQRGGWTACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTASNNVTNWVGTIWMTPVLGAYIADAHLGRYWTFVIASAIYLTGMVVLTLTVSIPGLKPPKCVDPDISNCEKASTLQLALFYGALYTLTIGTGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTLGLAVSIMIFLTGTRFYRHKVPAGSPFTRMVKVIVAALKKWHVPVPSDPKEFYELELEVYTKKGKFRIDSTPSLRFFNKACVKTGPTDEWTLSTVTQVEETKQMLRMIPILFATFIPSTMIAQINTLFVKQGTTLERNIGSFKIPPASLAGFVTLSMLICVVLYDRVFVKVIRKWTNNPRGITILQRMGIGMTFHIVIMTVASLMERYRLSVAKDHGVVESGEQVPLTIFVLLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSTTSLGIGSFFSSFLLTTVSHITKKNEHKGWILNNLNASHLDYYYAFFAILNFLNFIFFLVVSRYYVYKAEVSDSMEVLGEELRESR--RSEQESSR 590
A E G DDYTQDGTVDL+GNPVR+S+RGGWTACSFVVVYE+FERMAYYGISSNL+LYLT+KLHQGTV ++NNVTNWVGTIW+TP+LGAY+ADAHLGRYWTFV AS IY+TGM +LTL+VSIPGLKPP C P+I +C+KASTLQLA F+GALYTL IGTGGTKPNISTIGADQFDDF PKEKA KLSFFNWWMFSIF GTLFANTVLVYIQDNVGWTLGYGLPTLGL +S+MIFL GT FYRH+VPAGSPFT+M VIVAA +KW VP+PSDPKE +EL+LE Y + GKF I STP+LRF NKA VKTG TD W LS VTQVEETKQMLRMIPIL ATF+PSTMIAQINTLF+KQGTTL+R+IG+FKIPPASLAGFVT+SML+CVVLYDR FV VIRKWTNNPRGIT+LQRMGIG+ H +IM VASL ERYRL+VAK HG+VE+G Q+PLTIF+LLPQF+LMGTADAFLEVAK+EFFYDQAPESMKSLGTSYS+TSLGIG+F SSFLL+TVS IT+++ H+GWILNNLN SHLDYYYAFFA+LNFLNFIFF+ + R+YVYKAEVS+SM VL EEL+ R S QE+++
Sbjct: 2 AVEEGIDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISSNLVLYLTKKLHQGTVKSANNVTNWVGTIWITPILGAYVADAHLGRYWTFVFASLIYVTGMSLLTLSVSIPGLKPPPCHQPNIDDCKKASTLQLATFFGALYTLAIGTGGTKPNISTIGADQFDDFHPKEKASKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWTLGYGLPTLGLVISVMIFLAGTPFYRHRVPAGSPFTKMAMVIVAAARKWRVPLPSDPKELHELDLEEYARNGKFMIGSTPTLRFLNKAAVKTGSTDPWMLSAVTQVEETKQMLRMIPILIATFVPSTMIAQINTLFIKQGTTLDRHIGNFKIPPASLAGFVTISMLVCVVLYDRFFVPVIRKWTNNPRGITLLQRMGIGLVLHFIIMAVASLTERYRLNVAKQHGLVENGGQLPLTIFILLPQFVLMGTADAFLEVAKLEFFYDQAPESMKSLGTSYSSTSLGIGNFLSSFLLSTVSDITQRDGHQGWILNNLNKSHLDYYYAFFAVLNFLNFIFFMAMIRFYVYKAEVSESMHVLTEELKVMRLKASNQEAAK 591
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5C0U9 | E-Value: 0.000e+0, PID: 82.93 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8548... [more] |
| D7SZL3 | E-Value: 0.000e+0, PID: 81.80 | (Uncharacterized protein {ECO:0000313|EMBL:CBI2369... [more] |
| A5BCA6 | E-Value: 0.000e+0, PID: 83.51 | (Uncharacterized protein {ECO:0000313|EMBL:CAN6333... [more] |
| A0A2R6R8N5 | E-Value: 0.000e+0, PID: 80.48 | (Protein NRT1/ PTR FAMILY 5.2 like {ECO:0000313|EM... [more] |
| A0A5B6ZT67 | E-Value: 0.000e+0, PID: 80.37 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4673... [more] |
| A0A834H665 | E-Value: 0.000e+0, PID: 81.12 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7146... [more] |
| A0A5N6RE66 | E-Value: 0.000e+0, PID: 79.43 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8076... [more] |
| A0A5D3A616 | E-Value: 0.000e+0, PID: 80.00 | (Uncharacterized protein {ECO:0000313|EMBL:TYJ4534... [more] |
| A0A6P4P8H4 | E-Value: 0.000e+0, PID: 80.00 | (protein NRT1/ PTR FAMILY 5.2-like {ECO:0000313|Re... [more] |
| A0A1U8M1T9 | E-Value: 0.000e+0, PID: 79.66 | (protein NRT1/ PTR FAMILY 5.2-like {ECO:0000313|Re... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |