XM_017367357.1

Resource Type: 
Polypeptide
Name: 
XM_017367357.1
Identifier: 
XM_017367357.1-protein
Sequence: 
MASMVAKACNSNSSQLSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLS
DCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPF
EAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLV
DCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQD
FDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMES
DSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHF
PSESSIMATVPCLHNSPEAPTMTVRSNFKPRNSSAQNGLVAEKETAGSIE
KPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGS
KGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQD
TLHNDLLNTNGLPPTFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPD
TELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDES
IMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEV
ERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLR
QEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKH
RKTQLQHKLEQATELLDHQEV
Sequence Length: 
721
Sequence Checksum: 
29918bc167fa69f34a5f11c07f5bc708
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017367357.1, derives from mRNA, XM_017367357.1.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HFY2 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 951.814 bits (2459), Expect = 0.000e+0
Identity = 488/734 (66.49%), Postives = 583/734 (79.43%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQL-SSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDT-LHNDLLNTN-GLPPT--FSLDTVNNTISSIPKTNFV-SAIPTISDQNSL-PAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            MASMVAKA  S++SQL  ++ VQEKGSRNKRKFRADPP+ D +K VS+P S+CSSYEFSAEK +I+ +HGH  GCDMC +S+ H+DALKLDLGL+ AVG  E G S+ +EE    DE HDADWSDLTESQLEELVL+NLDTIF+ AIKK+V  GY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   S +GDG P G  + P QPQ RTEAR SE NL    + +PS AC+     E++ MA++P  H+S  E PT++   NF KP+NS   NG++ EK+    T+  ++K    VG T S A EEKF+GSRKISGITKREYILR KS+ LEKSYRTYGSKG SR GKLSSFGGLILDKK+KS++DST ++V+NA+LKISK +G  +PQD   HN  L+TN GLP +  F+++TV N IS++PKTN + S++PT+S   +L  A DTELSLS  +KN + P+P S ++ A    Y+G P +K  GQWVPQDKKDE I+KL PRV+ELQNQ+QEWTEWAN KVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEE+TMKKL EMENALCKASGQV+RAN AVRRLE+EN+ LRQEMEAAKL+A++SAASCQEVSKREK TLMK QSWEKQK  FQEE+VAEK +  QLQ + +QA  L D  E
Sbjct:    1 MASMVAKASGSSTSQLLPAMPVQEKGSRNKRKFRADPPIGDPNKIVSLPQSECSSYEFSAEKFEIIPSHGHPSGCDMCSISQDHSDALKLDLGLSTAVGSTEGGPSRSREEIEAADEFHDADWSDLTESQLEELVLSNLDTIFRGAIKKIVAHGYSEEIATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDWSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPISSLVGDGCPEGGNSVPAQPQLRTEARSSELNLPNPCKPSPSIACSHTCKCETASMASIPFAHSSQSETPTVSGIPNFVKPKNSFVVNGVIPEKDSPISTSDGVDKSVGVVGTTQSHAHEEKFVGSRKISGITKREYILRQKSLHLEKSYRTYGSKGSSRVGKLSSFGGLILDKKLKSLSDSTSVNVKNASLKISKTIGVDVPQDNGTHNLSLSTNVGLPSSVAFNVETV-NPISTLPKTNNIPSSLPTVSTPPALSAAADTELSLSFPTKNIAAPIPISSNAEANNSSYAGVPFDKSLGQWVPQDKKDEMILKLFPRVQELQNQLQEWTEWANHKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEESTMKKLSEMENALCKASGQVDRANTAVRRLEIENAALRQEMEAAKLRASESAASCQEVSKREKKTLMKFQSWEKQKTWFQEEIVAEKRKLAQLQQEQDQAKYLRDQLE 733    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EIF1 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0
Identity = 487/735 (66.26%), Postives = 581/735 (79.05%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQL-SSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDT-LHNDLLNTN-GLPPT--FSLDTVNNTISSIPKTNFV-SAIPTISDQNSL-PAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEV 721
            MASMVAKA  S++SQL  ++ VQEKGSRNKRKFRADPP+ D +K VS+P S+CSSYEFSAEK +I+ +HGH  GCDMC +S+ H+DALKLDLGL+ AVG  E G S+ +EE    DE HDADWSDLTESQLEELVL+NLDTIF  AIKK+V  GY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   S +GDG P G  + P QPQ RTEAR SE NL    + +PS AC+     E++ MA++P  H+S  E  T++   NF KP+NS   NG++ EK+    T+  ++K    VG T S A EEKF+GSRKISGITKREYILR KS+ LEKSYRTYGSKG SR GKLSSFGGLILDKK+KS++DST ++V+NA+LKISK +G  +PQD   HN  L+TN GLP +  F+++TV N IS++PKTN + S++PT+S   +L  A DTELSLS  +KN + P+P S ++ A    Y+G P +K  GQWVPQDKKDE I+KL PRV+ELQNQ+QEWTEWAN KVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEE+TMKKL EMENALCKASGQV+RAN AVRRLE+EN+ LRQEMEAAKL+A++SAASCQEVSKREK TLMK QSWEKQK  FQEE+VAEK +  QLQ + +QA  L D  E 
Sbjct:    1 MASMVAKASGSSTSQLLPAMPVQEKGSRNKRKFRADPPIGDPNKIVSLPQSECSSYEFSAEKFEIIPSHGHPSGCDMCSISQDHSDALKLDLGLSTAVGSTEGGPSRSREEIEAADEFHDADWSDLTESQLEELVLSNLDTIFTGAIKKIVAHGYSEEIATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDWSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSSLVGDGCPEGGNSVPAQPQLRTEARSSELNLPNPCKPSPSIACSHTCKCETASMASIPFAHSSQSETSTVSGIPNFVKPKNSFVVNGVIPEKDSPISTSDGVDKSVGVVGTTQSHAHEEKFVGSRKISGITKREYILRQKSLHLEKSYRTYGSKGSSRVGKLSSFGGLILDKKLKSLSDSTSVNVKNASLKISKTIGVDVPQDNGTHNLSLSTNVGLPSSVAFNVETV-NPISTLPKTNDIPSSLPTVSTPPALSAAADTELSLSFPTKNIAAPIPISSNADANNSSYAGVPFDKSLGQWVPQDKKDEMILKLFPRVQELQNQLQEWTEWANHKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEESTMKKLSEMENALCKASGQVDRANTAVRRLEIENAALRQEMEAAKLRASESAASCQEVSKREKRTLMKFQSWEKQKTWFQEEIVAEKRKLAQLQQEQDQAKYLRDKLET 734    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ABU1 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 938.332 bits (2424), Expect = 0.000e+0
Identity = 481/733 (65.62%), Postives = 567/733 (77.35%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLS-SISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGSI----EKPF---TAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPP--TFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            MASMVAKA +S +SQ+S +ISVQEKGSRNKRKF+ADPP+ D +K +S+P ++C SYEFSAEK +I  +HGH   CDMC +++ H DALKLDLGL+ AVG  E G S  +EE    DE HDADWSDLTESQLEELVL NLDTIF S IKK+V CGY+EE A +AVLRSGLCYGCKDTVSNIV+NTLAFLRN QE+DP+RE  F+DLQQMEKYILAELVCV+ EV+PFFSTGDAMWCLL+CDMNVS A AM+ D   S LGDG PNG  +    PQ RTE + SE NL    + NPS ACA +  SE+  MA++PC H+S  E PTM V  N  K +N    NGLV EKE   SI    +K F   +  G +HS A+EEKF GSRKISGITKREYILR KS++LE +YRTYG+KG SRAGKLS FGGL+LDKK+KSV+DS G++V+NA+LK SK MG  +PQD  +++L    GLP    F+ DTV N + ++ KTN  SA+P+++    L A DTELSLSL +K+N   MP   ++ AP   Y+  P +K  GQW+PQDKKDE I+KL PRV+ELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERAN+ VRRLEVEN+ LRQ+M+AAKL+AA+SAASCQEVSKREK TLMK QSWEKQK +FQEELVAEK +  QLQ  LEQA +L D  E
Sbjct:    1 MASMVAKASSSITSQVSPAISVQEKGSRNKRKFQADPPLGDPNKILSLPQNECLSYEFSAEKFEITPSHGHPSVCDMCSINQDHFDALKLDLGLSSAVGSSEVGPSHPREEIEAADEFHDADWSDLTESQLEELVLRNLDTIFMSGIKKIVACGYSEEVAMKAVLRSGLCYGCKDTVSNIVDNTLAFLRNNQEVDPSREHYFEDLQQMEKYILAELVCVLHEVRPFFSTGDAMWCLLICDMNVSHAFAMDGDPLSSVLGDGAPNGISSVSAHPQLRTEVKSSELNLPNPCKPNPSGACAHNCQSETPTMASIPCAHSSQSETPTMAVVPNLTKTKNPPVLNGLVPEKEIPNSISDAVDKSFGVDSVEGTSHSPAAEEKFGGSRKISGITKREYILRQKSLRLENNYRTYGTKGSSRAGKLSGFGGLMLDKKLKSVSDSIGVNVKNASLKTSKVMGVDMPQDNGNHNLSTKIGLPSPVAFNTDTV-NVVPNLAKTNVQSALPSVNAAPVLSAADTELSLSLPTKSNDALMPIGSNAEAPNCSYARVPYDKSLGQWIPQDKKDEMILKLVPRVKELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANSTVRRLEVENAALRQDMDAAKLRAAESAASCQEVSKREKRTLMKFQSWEKQKTVFQEELVAEKRKLVQLQQDLEQAKDLRDQLE 732    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ACQ3 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527526.1}))

HSP 1 Score: 927.546 bits (2396), Expect = 0.000e+0
Identity = 481/730 (65.89%), Postives = 572/730 (78.36%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSSIS-VQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSE-NLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGS----IEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPP--TFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            MASMVAKA +S ++Q+S  + VQEKGSRNKRKF+ADPP+ D +K +S+P ++C SYEFSAEK +I  ++GH  GCDMC +S+ H+DALKLDLGL+  +G  E G S  +EE    DE HDADWSDLTESQLEELVL NLDTIFKSAIKK+   GY+EE AT+AVLRSGLCYGCKDTVSN+V+NTLAFL NGQE+DP+RE  F+DLQQMEKY+LAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   S LGDGV   +V+A  +PQ RTEA+ SE NL      NPS ACA +  SE   +A++PC H+S  E PTM V  N  K +NS   NGLV EKE+  S    ++KPF   G + S A EEK   SRKISGITKREY+LR KS+ LEK+YRTYGSKG SRAGKLS FGGL+LDKK+KSV+DS G++V+NA+LKISK MG  +PQD  +++L    GLP    F+L+TV N + ++PKTN  SA+P ++    L A DTELSLSL +K+N  PMP S    AP   Y+  P +KP GQW+PQDKKDE I+KL PRV ELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQV+RAN+AV+ LEVEN+ LRQEM+AAKL+AA+SAASCQEVSKREK TLMK QSWEKQK +FQEELVAEK +  QL+H+LEQA +L D  E
Sbjct:   39 MASMVAKASSSITTQVSPATLVQEKGSRNKRKFQADPPLGDPNKIISLPQNECQSYEFSAEKFEIAPSNGHPSGCDMCGISQDHSDALKLDLGLSSGLGSSEVGPSHPREEIEAADEFHDADWSDLTESQLEELVLINLDTIFKSAIKKIFTYGYSEEVATKAVLRSGLCYGCKDTVSNVVDNTLAFLGNGQEIDPSREHYFEDLQQMEKYVLAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSSVLGDGV--SSVSA--RPQLRTEAKSSELNL-----PNPSSACAHNCQSEIPTVASIPCSHSSQSETPTMAVVPNLTKTKNSPVPNGLVPEKESPNSSSDAVDKPFAVAGTSQSPAPEEKLGASRKISGITKREYVLRQKSLHLEKNYRTYGSKGSSRAGKLSGFGGLLLDKKLKSVSDSPGVNVKNASLKISKAMGVDMPQDNGNHNLSTKVGLPSPVAFNLETV-NAVPNLPKTNVHSALPMVNAAPLLSAADTELSLSLPTKSNDAPMPISSIPEAPNCSYARVPCDKPPGQWIPQDKKDEMILKLVPRVHELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVDRANSAVQTLEVENAALRQEMDAAKLRAAESAASCQEVSKREKKTLMKFQSWEKQKTLFQEELVAEKRKLVQLRHELEQAKDLRDQLE 758    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438F6Z1 ((Putative E3 ubiquitin-protein ligase RF298 {ECO:0000313|EMBL:RVW55686.1}))

HSP 1 Score: 880.167 bits (2273), Expect = 0.000e+0
Identity = 459/735 (62.45%), Postives = 558/735 (75.92%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLS-SISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFL-GDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKI-SGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPT--FSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAP---DTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEV 721
            M+SM     +S  +Q S S+S QEKGSRNKRKFRADPP+ D +K VS     C SYEFSAEK ++  +HG  G C MC++++ H+D LKLDLGL+ A G  E G S+ ++E +  D+  DADWSDLTESQLEELVL+NLDTIFKSAIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+DP+RE  FDDLQQ+EKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ DSF S + GDG  NG+ +   QPQ++TEA+ SE                + P+  + + ++PC H+S  E P  +   N  KP+NS   NGLV+EK+    T+ + +K F+  G + S+A EEKF  SRK+ SG TKRE +LR KS+ LEK+YRTYG KG SR  KLS  G  +LDKK+KSV+DSTG++++NA+LKISK MG  +PQD  +++L   +GL  +  F+L+TVN TI S+PKTN  SA+P +   N+ P P   DTELSLSL++K+NS  +P SC++      Y+G P +K  GQWVPQDKKDE I+KL PRVRELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LE+NT KKL EMENAL KASGQVERANAAVRRLEVENS+LRQEMEAAKL+AA+SAASCQEVSKREK TLMK Q+WEKQK  F EEL +EK R  QL+ +LEQATEL D  E 
Sbjct:    1 MSSMAVNGSSSCGTQGSPSVSAQEKGSRNKRKFRADPPLGDPNKIVSSQ-DQCLSYEFSAEKFEVTSSHGQPGACGMCNLNQDHSDGLKLDLGLSSAAGSSEVGPSQPRDE-LEADDFQDADWSDLTESQLEELVLSNLDTIFKSAIKKIVACGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDPSREHYFDDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDSFSSIVSGDGASNGSSSTSGQPQSKTEAKSSE---------------LNLPNPCNPVHSIPCAHSSQSETPIASGVPNLAKPKNSLVLNGLVSEKDGLNNTSDTTDKSFSVTGTSQSAAPEEKFGLSRKVHSGGTKRESMLRQKSLHLEKNYRTYGCKGSSRTAKLSGLGSYMLDKKLKSVSDSTGVNLKNASLKISKAMGVDVPQDNGNHNLSPNSGLSSSAAFNLETVN-TIGSLPKTNSPSALPPV---NTPPIPSGADTELSLSLTTKSNSASVPLSCNAETSNCNYTGIPYDKSLGQWVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEDNTAKKLSEMENALGKASGQVERANAAVRRLEVENSSLRQEMEAAKLEAAESAASCQEVSKREKKTLMKFQTWEKQKAFFHEELTSEKRRLAQLRQELEQATELQDQLEA 714    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HDJ7 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 879.396 bits (2271), Expect = 0.000e+0
Identity = 458/734 (62.40%), Postives = 556/734 (75.75%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFL-GDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKI-SGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPT--FSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAP---DTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQEV 721
            MA   +  C +  S   S+S QEKGSRNKRKFRADPP+ D +K VS     C SYEFSAEK ++  +HG  G C MC++++ H+D LKLDLGL+ A G  E G S+ ++E +  D+  DADWSDLTESQLEELVL+NLDTIFKSAIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+DP+RE  FDDLQQ+EKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ DSF S + GDG  NG+ +   QPQ++TEA+ SE                + P+  + + ++PC H+S  E P  +   N  KP+NS   NGLV+EK+    T+ + +K F+  G + S+A EEKF  SRK+ SG TKRE +LR KS+ LEK+YRTYG KG SR  KLS  G  +LDKK+KSV+DSTG++++NA+LKISK MG  +PQD  +++L   +GL  +  F+L+TVN TI S+PKTN  SA+P +   N+ P P   DTELSLSL++K+NS P+P SC++      Y+G P +K  GQWVPQDKKDE I+KL PRVRELQNQ+QEWTEWANQKVMQAARRL KDKAELKTL+QEKEEVERLKK+KQ LE+NT KKL EMENAL KASGQVERANAAVRRLEVENS+LRQEMEAAKL+AA+SAASCQEVSKREK TLMK Q+WEKQK  F EEL +EK R  QL+ +LEQATEL D  E 
Sbjct:    1 MAVNGSSTCGTQGS--PSVSAQEKGSRNKRKFRADPPLGDPNKIVSSQ-DQCLSYEFSAEKFEVTSSHGQPGACGMCNLNQDHSDGLKLDLGLSSAAGSSEVGPSQPRDE-LEADDFQDADWSDLTESQLEELVLSNLDTIFKSAIKKIVACGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDPSREHYFDDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDSFSSIVSGDGASNGSSSTSGQPQSKTEAKSSE---------------LNLPNPCNPVHSIPCAHSSQSETPIASGVPNLAKPKNSLVLNGLVSEKDGLNNTSDTTDKSFSVTGTSQSAAPEEKFGLSRKVHSGGTKRESMLRQKSLHLEKNYRTYGCKGSSRTAKLSGLGSYMLDKKLKSVSDSTGVNLKNASLKISKAMGVDVPQDNGNHNLSPNSGLSSSAAFNLETVN-TIGSLPKTNSPSALPPV---NTPPIPSGADTELSLSLTTKSNSAPVPLSCNAETSNCSYTGIPYDKSLGQWVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLEDNTAKKLSEMENALGKASGQVERANAAVRRLEVENSSLRQEMEAAKLEAAESAASCQEVSKREKKTLMKFQTWEKQKAFFHEELTSEKRRLAQLRQELEQATELQDQLEA 711    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9U0F6 ((putative E3 ubiquitin-protein ligase RF298 {ECO:0000313|RefSeq:XP_011090901.1, ECO:0000313|RefSeq:XP_011090902.1}))

HSP 1 Score: 871.692 bits (2251), Expect = 0.000e+0
Identity = 454/732 (62.02%), Postives = 556/732 (75.96%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEE-NVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHN-SPEAPTMTVRSNFKPRNSSAQNGLVAEKETAGSI----EKP-FTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLP--PTFSLDTVNNTISSIPKTNFVSAIPTI--SDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNE-KPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            MASMVAKAC+S SSQ+ +++VQEKGSRNKRKFRA+PP+SD SK + +P ++C+S+EFSAEK    ++HG + GCD+C +++  +DALKLDLGL+CAVG  E G S+ +EE     DE HDADWSDLTES+LEELVLNNLDTIFKSAIKK++  GY+EE AT+A+LRSGL YGCKDTVSNIV+NTLAFLR+GQE+DP+RE  F+DLQQMEKYILAELVC+++EV+PFFSTGDAMWCLL+CDMNVS ACAM+ D  G F  D   N   T   QPQ + E     N+    + N S A A H PSE+  +A+    H+   EAP +    N K + S   +GLV +K+   S     EKP F+A G +H++ +EEKF+GSRK+SGITKREYILR KS+  EK YRTYGSKG SRAGKLSSFGGL+LD+K+K VADSTG++ +N+  KI+K +G  +P + ++++L  T G    PTF L+ V+ + SS        A+P +  +   SLP  DTELSLS  +K+ + PMP S +  +    Y G  N+ K  GQW PQD+KDE IMKL PRVRELQNQ+QEWTEWANQKVMQAARRLSKDKAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERANAAVRRLEVEN+ LR+EMEAAKL+AA+SAASCQEVSKREK TLMK QSWEKQK +FQEEL  EK +  Q+Q KL+QA ++ D  E
Sbjct:    1 MASMVAKACSSTSSQMPAMTVQEKGSRNKRKFRAEPPLSDPSKAIPLPSNECTSFEFSAEKF---ESHGRTNGCDVCCINQDGSDALKLDLGLSCAVGTSEVGVSRPREEIEASADEFHDADWSDLTESELEELVLNNLDTIFKSAIKKIIASGYSEEVATKAILRSGLWYGCKDTVSNIVDNTLAFLRSGQEIDPSREHYFEDLQQMEKYILAELVCLLKEVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLGGFPSDATTNSNSTVSAQPQLKAEFNSESNIFFPCKPNTSVAYAQHCPSETPNLASSHGGHSLQSEAPKIANGPNLKSKTSFVLHGLVPDKDCQNSTPNICEKPSFSAAGISHTAVTEEKFVGSRKVSGITKREYILRQKSMHFEKHYRTYGSKGTSRAGKLSSFGGLVLDEKLKGVADSTGINAKNSPFKINKAVGFDVPPENVNHNLSTTTGFSSVPTFGLEAVDQSSSS--------ALPLVPFNTSPSLPVADTELSLSFPAKSIANPMPISYNIESANCSYLGSSNDNKTLGQWAPQDRKDEMIMKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANAAVRRLEVENAALRREMEAAKLRAAESAASCQEVSKREKTTLMKFQSWEKQKTIFQEELSTEKWKLMQMQQKLQQAKDVKDQVE 721    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5VVN5 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 864.759 bits (2233), Expect = 0.000e+0
Identity = 457/767 (59.58%), Postives = 558/767 (72.75%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLS-SISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNSP-EAPTMT--VRSNFKPRNSSAQNGLVAEKETAGSI----EKPFTAVGPTHSSASEEKFIGSRKISGI-TKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNG--LPPTFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPA------------------------------------PDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            MASMVAK  +S S+Q+S SI+VQEKGSRNKRKFRADPP+ D +K + +P ++CSSYEFSAEK +I Q HG  G CD+C V++ H+D LKLDLGL+  VG  E G S+ +EE +  DE  DADWSDLTE+QLEELVL+NLDTIFKSAIKK+V CGY EE AT+AVLRSGLCYGCKDTVSNIV+NTL FLR+GQE+DP+RE  F+DLQQ+EKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   SF+ DG  NG+ + P QPQ++ EA+  E                +  S S  + ++P  H+S  E P +   V +  KP+NS  Q+G  +EKE   S     +K F   G + SSA EEK + SRK+  + TKREY+LR K + LEK+YRTYG KG SRAGKLS  GGLILDKK+KSV+DST ++++NA+LKISK MG  +PQ+  +++L +  G   P  F+LD  +NT S +P+ N  S +P ++  N LPA                                     DTELSLSL +KNNS  +  SC S A    +SG P +KP+GQWVP+DKKDE I+KL PRVR+LQNQ+QEWTEWANQKVMQAARRLSKDKAELK+L+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERAN+AVRRLEVEN+ LRQEMEAAK++AA+SAASCQEVSKREK TLMKIQSWEKQK++  EELV EK +  QL  ++EQA +L +  E
Sbjct:    1 MASMVAKGSSSCSTQVSPSITVQEKGSRNKRKFRADPPLGDPNKIIPLPQTECSSYEFSAEKFEITQGHGQIGVCDLCTVNKDHSDGLKLDLGLSSTVGSSEVGPSRPREE-LEADEFQDADWSDLTETQLEELVLSNLDTIFKSAIKKIVACGYAEEVATKAVLRSGLCYGCKDTVSNIVDNTLNFLRSGQEIDPSREHCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLNSFMSDGASNGSSSMPNQPQSKIEAKSVE---------------LNLLSPSKPVPSIPGSHSSQYETPAIAGGVPNIAKPKNSLVQSGSFSEKEITNSTSHNGDKSFGVSGTSQSSAVEEKLLSSRKVHSVSTKREYMLRQKPLHLEKNYRTYGCKGSSRAGKLSGLGGLILDKKLKSVSDSTAVNLKNASLKISKAMGVDVPQENGNHNLSSNAGPSSPRAFNLD-ADNTASVLPQNNVPSILPAVNTSNPLPAVSTSTALPAVHTSTPLPAVNTSTPLPVANTPPALSVADTELSLSLPTKNNSSSVSLSCKSDATNSIFSGIPYDKPSGQWVPRDKKDEMILKLVPRVRDLQNQLQEWTEWANQKVMQAARRLSKDKAELKSLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANSAVRRLEVENAALRQEMEAAKVRAAESAASCQEVSKREKKTLMKIQSWEKQKVLLNEELVTEKRKFKQLLQEVEQAKDLQEQLE 750    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9IUA4 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 446/741 (60.19%), Postives = 555/741 (74.90%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQLSS-ISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISGRQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKE----TAGSIEKPFTAVGPTHSSASEEKFIGSRKI-SGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPTFS---LDTVN-NTISSIPKTNFVSAIPTISDQNSLPAP---------DTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            MASMVA +  S++ QLSS +S+Q+KGSRNKRKFRADPP+ D +K +S+P ++C SYEFSAEK DI   HG    CD+C VS+ H+D LKLDLGL+ A G FE G  + +EE +  DE  DADWSDLTE++LEELVL+NLD IFKSAIKK++ CG+TEE AT+AVLRSGLCYGCKDTVSNIV+N L FLR+ QE+DP+R   F+DLQQ+EKY+LAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACAM+ D   SF+GDG  +G+       Q++TE +  E                + PS S  +    C H++  EAPT+    N  K +NS   NGLV+EK+    T+ +I+K F A G + S A EEKF GSRK+ S  TKREYILR KS+ +EK YRTYGSKG +R GKLS FGGLILDKK+KSV+DS  +++++A+LKI+K +G  +PQD   N  L+TN  P + +   L++V  NTIS++ KTN ++ +  +S   +LPAP         DTELSLSL +K+NS  +P+SC++      ++G P +K  GQWVP+DKKDE I+KL PRVRELQNQ+QEWTEWANQKVMQAARRLSK+KAELKTL+QEKEEVERLKK+KQ LEENTMKKL EMENALCKASGQVERAN+ VRRLEVEN+ LRQEMEAAKL+A +SAASC EVSKREK TL+K+QSWEKQK +FQEEL+ EK + TQL  +LEQA +L +  E
Sbjct:    1 MASMVATSSGSSTCQLSSSVSIQDKGSRNKRKFRADPPLGDPNKIISLPQNECPSYEFSAEKFDIAPGHGQPSACDLCSVSQDHSDGLKLDLGLSSAAGSFEVGPRRPREE-LEADEFQDADWSDLTEAELEELVLSNLDAIFKSAIKKIIACGHTEEVATKAVLRSGLCYGCKDTVSNIVDNALTFLRSSQEIDPSRGHCFEDLQQLEKYVLAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSSFMGDGASSGSSYNSTHLQSKTETKSFE---------------LNLPSPSKQLN---CPHSTQSEAPTVAGVPNIMKSKNSLVLNGLVSEKDGMTTTSETIDKSFNAAGTSQSPAVEEKFGGSRKVHSSTTKREYILRQKSLHVEKHYRTYGSKGSTRGGKLSGFGGLILDKKLKSVSDSAAVNLKSASLKINKPVGVDVPQDN-GNHSLSTNSGPSSSAASNLESVTVNTISALSKTNTLTTLAAVSSPPALPAPNTPPSLSVADTELSLSLPTKSNSAMVPSSCNAEPSNCSFAGIPYDKSLGQWVPRDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKEKAELKTLRQEKEEVERLKKEKQTLEENTMKKLSEMENALCKASGQVERANSTVRRLEVENAQLRQEMEAAKLRATESAASCDEVSKREKKTLIKVQSWEKQKALFQEELITEKRKVTQLLQELEQAKDLEEQLE 721    
BLAST of XM_017367357.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DKM4 (RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089})

HSP 1 Score: 863.218 bits (2229), Expect = 0.000e+0
Identity = 452/727 (62.17%), Postives = 545/727 (74.97%), Query Frame = 0
 
Query:    1 MASMVAKACNSNSSQ--LSSISVQEKGSRNKRKFRADPPVSDASKTVSVPLSDCSSYEFSAEKLDIMQNHGHSGGCDMCHVSEGHADALKLDLGLACAVGPFEAGTSKVKEENVVHDEVHDADWSDLTESQLEELVLNNLDTIFKSAIKKLVDCGYTEEFATRAVLRSGLCYGCKDTVSNIVENTLAFLRNGQELDPAREQDFDDLQQMEKYILAELVCVIREVKPFFSTGDAMWCLLVCDMNVSLACAMESDSFGSFLGDGVPNGAVTAPVQPQARTEARGSENLQISG---RQNPSFACACHFPSESSIMATVPCLHNS-PEAPTMTVRSNF-KPRNSSAQNGLVAEKETAGSIEKPFTAVGPTHSSASEEKFIGSRKISGITKREYILRHKSIQLEKSYRTYGSKGGSRAGKLSSFGGLILDKKIKSVADSTGLSVRNATLKISKEMGTCLPQDTLHNDLLNTNGLPPTFSLDTVNNTISSIPKTNFVSAIPTISDQNSLPAPDTELSLSLSSKNNSVPMPASCSSGAPKFGYSGFPNEKPAGQWVPQDKKDESIMKLAPRVRELQNQMQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKDKQNLEENTMKKLCEMENALCKASGQVERANAAVRRLEVENSTLRQEMEAAKLQAAQSAASCQEVSKREKNTLMKIQSWEKQKLMFQEELVAEKHRKTQLQHKLEQATELLDHQE 720
            M SMVAK  +S+S+   LS++ VQEKGSRNKRK+RADPP+ D +K VS+P ++CSSYEFSAEK +I   HGHS  CD+C +S+ H DALKLDLGL  +VG  E G S+ +EE     E HDADWSD TESQLEELVL N+D IFK+AIKK+V CGY+EE AT+AVLRSGLCYGCKDTVSNIV+NTLAFLRNGQE+D +RE  F+DLQQMEKYILAELVCV+REV+PFFSTGDAMWCLL+CDMNVS ACA++ D   S  GD  PNG+  A  Q Q+RTE  GS  L +S    +QN S ACA     E + MA++P  + S  +   ++   NF KP+NS              S++K F A+G T S A EEK  GSRKISGITKREY+LR KS+ LEK YRTYGSKG SRAGKL+ FG L+LD+K+K+V+DS   +++NA+LKISK MG  +PQD   N  L+TN          V +TIS+IP+ +  S + T+S   +L A D ELS SL +KN++ PMP + ++ AP   Y+G P +K  GQWVPQDKKDE I+KL PRV+ LQNQ+QEWTEWANQKVMQAARRLS+DKAELKTL+QEKEE ERLKK+KQ LEENTMKKL EMENAL KASGQVERAN  VRRLEVEN+TLR++ME AKL+AA+SAA+CQEV KREK TLMK QSWEKQK  FQEEL A+KH+  QLQ +LEQA ++ D  E
Sbjct:   86 MPSMVAKTTSSSSTSQVLSAMPVQEKGSRNKRKYRADPPIGDLNKVVSLPQNECSSYEFSAEKYEITPVHGHSSECDVCCLSQDHLDALKLDLGLPTSVGSSEVGPSQPREEIEAVHEFHDADWSDFTESQLEELVLINVDMIFKNAIKKIVGCGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFLRNGQEIDLSREHYFEDLQQMEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAVDGDILSSSAGDVGPNGSDCASTQAQSRTET-GSSELDLSSNPCKQNSSIACAHTCQCEIANMASIPSAYGSQSQTSAISGVPNFVKPKNS------------FDSVDKSFGAIGTTQSHAPEEKIGGSRKISGITKREYLLRQKSLHLEKCYRTYGSKGSSRAGKLNGFGSLVLDRKLKAVSDSACANLKNASLKISKTMGVDVPQDN-ENRKLSTN----------VGDTISTIPEISVPSTLHTVSTPPALSAADIELSPSLPTKNDAAPMPVTVNAVAPNCSYAGIPYDKSIGQWVPQDKKDEMILKLLPRVQGLQNQLQEWTEWANQKVMQAARRLSEDKAELKTLRQEKEEAERLKKEKQTLEENTMKKLTEMENALRKASGQVERANNTVRRLEVENATLRKDMEVAKLRAAESAANCQEVLKREKKTLMKFQSWEKQKTFFQEELAAQKHKLAQLQQELEQAKDIWDQLE 788    
Match NameStatsDescription
A0A7J7HFY2E-Value: 0.000e+0, PID: 66.49RING-type domain-containing protein {ECO:0000259|P... [more]
A0A4S4EIF1E-Value: 0.000e+0, PID: 66.26RING-type domain-containing protein {ECO:0000259|P... [more]
A0A5B7ABU1E-Value: 0.000e+0, PID: 65.62RING-type domain-containing protein {ECO:0000259|P... [more]
A0A5J5ACQ3E-Value: 0.000e+0, PID: 65.89(Uncharacterized protein {ECO:0000313|EMBL:KAA8527... [more]
A0A438F6Z1E-Value: 0.000e+0, PID: 62.45(Putative E3 ubiquitin-protein ligase RF298 {ECO:0... [more]
F6HDJ7E-Value: 0.000e+0, PID: 62.40RING-type domain-containing protein {ECO:0000259|P... [more]
A0A6I9U0F6E-Value: 0.000e+0, PID: 62.02(putative E3 ubiquitin-protein ligase RF298 {ECO:0... [more]
A0A6J5VVN5E-Value: 0.000e+0, PID: 59.58RING-type domain-containing protein {ECO:0000259|P... [more]
A0A2N9IUA4E-Value: 0.000e+0, PID: 60.19RING-type domain-containing protein {ECO:0000259|P... [more]
A0A4S4DKM4E-Value: 0.000e+0, PID: 62.17RING-type domain-containing protein {ECO:0000259|P... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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