XM_017367808.1

Resource Type: 
Polypeptide
Name: 
XM_017367808.1
Identifier: 
XM_017367808.1-protein
Sequence: 
METTAAQFPRHHNHHHHNHNQQLPRVFSGEMIARQQHSDNDRSNDCNLTS
LCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWRE
ANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLD
LQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQ
SGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPC
KAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKD
QLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQC
NNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGS
CYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRR
DLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELG
FPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGI
PSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPND
GLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRAD
HNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSA
STTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFD
DVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKA
EINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAP
KGWGWRTALLFDELSDLLQNGALRIAAIVQLI
Sequence Length: 
882
Sequence Checksum: 
3424dc74127e6a552a55cd8b38254cef
View location in JBrowse: 
DCARv2_Chr8:26361559..26370058+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017367808.1, derives from mRNA, XM_017367808.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A3R8 (BTB domain-containing protein {ECO:0000259|PROSITE:PS50097})

HSP 1 Score: 1367.06 bits (3537), Expect = 0.000e+0
Identity = 657/853 (77.02%), Postives = 737/853 (86.40%), Query Frame = 0
 
Query:   36 QHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            QHSDNDRS+      DCNLTSLCDHVQ EGFNNG+FSD+VVHAMGSTYHLHRLILSRSSYFRNMLHGPW+EANAP+++LHVDD NVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELW+PSEEKRFELALYTL+A+ A  KAEH E GS++ +I   T  +  K KGK ++  +++  LES++GRL +KD LEG  T  N LVELA  V+ S     +  +Q+QQA+ CT+  LEPR  CN  R SS NS SYT ++RS+CSYLE+P     + L  DGVAMEGPSEEGSCYQ NNN+WL  +QR C++M SSC+G+M +EWGRC+MPPLSWGGRIVGRR +K   KG CG+ GE+YD FVNIFEGGSLLY NM+FEALLN RKQLEELGFP KAVND LWLQMLLSQRV EIGADTCKNCCLVS+ C CRQP+G+S G+ +SGYY+QEH+Q+   SN+GN+YVTDS+QGEG+GLFRPVRVHV   GPNDGLAGIG GTTFVPAAAWPPTRFVFSRVPFG GNRNCQQ+L NDD + RADHN D  GDGLTALVGLSQGV ++++VHGEQTERGYETDLQ  L G SV+  +T GI +QML+SPE AIG+EWENANSSISLDMKTPLSHFPPFRF+VEF DVHRLSDGQVKHSPEVFYAGSLWKVSVQAF+DEDPQGRRTLGLF+HRRKAEI DPL+K HMY+D+REKVTARYQLICPSKREVMVFGS KQ GTLLPKAPKGWGWRTALLFDEL DLLQNGALR+AA+VQLI
Sbjct:   23 QHSDNDRSSGELRALDCNLTSLCDHVQSEGFNNGSFSDIVVHAMGSTYHLHRLILSRSSYFRNMLHGPWKEANAPIVALHVDDKNVNGEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWMPSEEKRFELALYTLLAESAFRKAEHSERGSSSSEIGMSTHSDSSKVKGKNLIDSNTNKKLESELGRLSLKDDLEGHKTAHNILVELADCVVDSHTGVHDSKQQMQQAT-CTERDLEPRYHCNIHRHSSSNSFSYTDDIRSSCSYLEMPIGVGVSGLGADGVAMEGPSEEGSCYQLNNNSWLARDQRHCSSMTSSCNGLMPNEWGRCAMPPLSWGGRIVGRRQVKGYAKGNCGVGGEEYDTFVNIFEGGSLLYCNMSFEALLNARKQLEELGFPCKAVNDGLWLQMLLSQRVQEIGADTCKNCCLVSIACRCRQPFGFSHGVAASGYYVQEHEQNNPQSNMGNVYVTDSSQGEGNGLFRPVRVHVR--GPNDGLAGIGHGTTFVPAAAWPPTRFVFSRVPFGMGNRNCQQSLANDDVEARADHNGDLAGDGLTALVGLSQGVGNIANVHGEQTERGYETDLQSRLTGPSVAGPSTSGIPMQMLESPENAIGIEWENANSSISLDMKTPLSHFPPFRFAVEFQDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFSDEDPQGRRTLGLFIHRRKAEITDPLRKFHMYLDSREKVTARYQLICPSKREVMVFGSFKQPGTLLPKAPKGWGWRTALLFDELGDLLQNGALRVAAVVQLI 872
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A3I3 (BTB domain-containing protein {ECO:0000259|PROSITE:PS50097})

HSP 1 Score: 1356.66 bits (3510), Expect = 0.000e+0
Identity = 653/853 (76.55%), Postives = 734/853 (86.05%), Query Frame = 0
 
Query:   36 QHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            QHSDNDR++      DCNLTSLCDH+QLEGF+NG+FSD+VVHAMGSTYHLHRLILSRSSYFRNMLHGPW+EA+AP+++L++DD NVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELW+PSEEKRFELALYTL+A+ A  KAEH E GS++ +I   T  +  K KGK ++  +++  LES++GRL +KD LEG  T  N LVELA  V+ S     +  +Q+QQA+ CT+  LEPR  CN  R SS NS SYT ++RS+CSYLE+P     + L  DGVAMEGPSEEGSCYQ NNN+WL  +QR C++M SSC+G+M +EWGRC+MPPLSWGGRIVGRR +K   KG CG+ GE+YD FVNIFEGGSLLY NM+FEALLN RKQLEELGFP KAVND LWLQMLLSQRV EIGADTCK+CCLVS  C CRQP+G S G+ S+GYY+QEHDQ+ S SNIGN+YVTDSAQ EG+GLFRPVRVHV   GP DGLAGIGRGTTFVPAAAWPPTRFVFSRVPFG GNRNCQQ+L NDD D RADHN D  GDGLTALVGLSQGVS++++V GEQTERGYETDLQ  +   SV+  +T GI VQML+ PE AIG+EWENANSSISLDMKTPLSHFPPFRF+VEF DVHRLSDGQVKHSPEVFYAGSLWKVSVQAF+DEDPQGRRTLGLF+HRRKAEI DPL+K HMY+D+REKVTARYQLICPSKREVMVFGS KQ GTLLPKAPKGWGWRTALLFDEL DLLQNGALR+AA+VQLI
Sbjct:   23 QHSDNDRTSGELRALDCNLTSLCDHIQLEGFSNGSFSDIVVHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLNIDDKNVNGEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWMPSEEKRFELALYTLLAESAFRKAEHSERGSSSSEIGMSTHSDSSKVKGKNLIDSNTNKKLESELGRLSLKDDLEGHKTAHNILVELADCVVDSHTGVHDSKQQMQQAT-CTERDLEPRYHCNIHRHSSSNSFSYTDDIRSSCSYLEMPIGVGVSGLGADGVAMEGPSEEGSCYQLNNNSWLARDQRHCSSMTSSCNGLMPNEWGRCAMPPLSWGGRIVGRRQVKGYAKGNCGVGGEEYDTFVNIFEGGSLLYCNMSFEALLNARKQLEELGFPCKAVNDGLWLQMLLSQRVQEIGADTCKSCCLVSTACVCRQPFGISHGVASTGYYMQEHDQNNSQSNIGNIYVTDSAQSEGNGLFRPVRVHVR--GPIDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGMGNRNCQQSLANDDIDVRADHNGDLAGDGLTALVGLSQGVSNIANVRGEQTERGYETDLQSRMTETSVAGPSTSGIPVQMLEPPENAIGIEWENANSSISLDMKTPLSHFPPFRFAVEFQDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFSDEDPQGRRTLGLFIHRRKAEITDPLRKFHMYLDSREKVTARYQLICPSKREVMVFGSFKQPGTLLPKAPKGWGWRTALLFDELGDLLQNGALRVAAVVQLI 872
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C0Z4 (BTB domain-containing protein {ECO:0000259|PROSITE:PS50097})

HSP 1 Score: 1333.55 bits (3450), Expect = 0.000e+0
Identity = 651/854 (76.23%), Postives = 727/854 (85.13%), Query Frame = 0
 
Query:   36 QHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRG-TTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            QHSDNDRS+      DCNLTSLC+H+Q EGFNNG+FSD+VVHAMGSTYHLHRLILSRSSYFRNMLHGPW+EA+AP+++LHVDD NVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQDLCAICTDFIISELW SNFLAYQVFAESQDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTL+ALLTSDELWVPSEEKRFELAL TL+AK A  KAEH E+GS++ ++   T  +  K KGK +++ S+S  L S++GRL +KD LEG  T  N LVELA  V+ S    +  SKQ  Q +ACT+  LEPR  C   R SS NS SYT ++RS+CS LEVP    A+ L  DG+AMEGPSEEGSCYQ N+N+WL  ++RPC++MNSSC G+M +EWGRC+MPPLSWGGRIVG+R +K   KG CG+ GE+Y+ FVNIFEGGSLLY NM+FEALLNVRKQLEELGFP KAVND LWLQMLLSQRV EIG D CKNCC  SMVCACR  +G SRG+ ++GYY+QEHDQ+ SPSNIGN+YVTDSAQGEG+G FRPVRVHV   GP DGLAGIGRG TTFVPAAAWPPTRFVFSRVPFG GNRNCQQ+L NDD D R DHN D  GDGLTALVGLSQGVS+ ++VH EQTERGYETD Q  L   SV+  +T GI VQML+ PE AIG+EWEN NSSISLDMKTPLSHFPPFRF+VEF DVHRLSDGQVKHSPEVFYAGSLWKVSVQAF+DEDPQGRRTLGLFLHRRKAEI DPL+K HMY+D+REKVTARYQLICPSKREVMVFGS KQ GTLLPKAPKGWGWRTALLFDEL DLLQNGALR+AA+VQLI
Sbjct:   23 QHSDNDRSSGELRALDCNLTSLCEHIQSEGFNNGSFSDIVVHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPIVALHVDDKNVNGEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWNSNFLAYQVFAESQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSQTLYALLTSDELWVPSEEKRFELALCTLLAKSASRKAEHSEQGSSSSEMEMSTHSDSSKIKGKNLINSSTSKRLGSELGRLSLKDDLEGHKTAHNILVELADCVVDS-HTGVHDSKQQMQQAACTEPDLEPRYHCKINRHSSSNSFSYTDDIRSSCSCLEVPIGVGASGLGVDGIAMEGPSEEGSCYQLNDNSWLARDKRPCSSMNSSCSGLMPNEWGRCAMPPLSWGGRIVGQRQVKGYAKGNCGVGGEEYETFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIGLDICKNCCFGSMVCACRPQFGISRGVTATGYYMQEHDQNNSPSNIGNIYVTDSAQGEGNGPFRPVRVHVR--GPIDGLAGIGRGGTTFVPAAAWPPTRFVFSRVPFGVGNRNCQQSLANDDIDIRTDHNGDLSGDGLTALVGLSQGVSNTANVHAEQTERGYETDTQNRLTEPSVAGPSTSGIPVQMLEQPENAIGIEWENTNSSISLDMKTPLSHFPPFRFAVEFQDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFSDEDPQGRRTLGLFLHRRKAEITDPLRKFHMYLDSREKVTARYQLICPSKREVMVFGSFKQPGTLLPKAPKGWGWRTALLFDELGDLLQNGALRVAAVVQLI 873
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PK29 ((Germ cell-less protein-like {ECO:0000313|EMBL:PSR92610.1}))

HSP 1 Score: 1286.17 bits (3327), Expect = 0.000e+0
Identity = 629/863 (72.89%), Postives = 713/863 (82.62%), Query Frame = 0
 
Query:   29 GEMIARQQ---HSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            G+M  R+Q   HSDNDRS+      DCNL SLCDH+QLEGFNNG+FSDVVVHAMGS YHLHRLILSRSSYFRNMLHGPW+EANAP++ LHVDD NVN EAIA ALAYLYGHHPKL+D+NA+RVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQ+FAE QDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSS TLHALLTSDELWVPSEEKRFELALYT +AK A CK E  EEGS++ +I   T  +  K KG  ++   +   L+ ++G + +KD +EG +T  N +VE    V+ S +  +  SKQ  Q  +CT+S LEPR  C+ ER SS +S S+  ++RS+CSYLE+P       L  +GVAMEGPSEEGSCYQ NNN+W+  +QR CN+MNSS +G M SEWGRC +PPLSWGGRIVGRR +K   +  CG+SGEDY+AFVN+FE GSLLY NM+FEALLNVRK LEELGFP KAVND LWLQMLLSQRV EIGADTCKNCCLV+M C CR  +G+S G  ++GYY+QE D +   SNIGN+YVTDS QGEG+GLFRPVRVHV   G  DGLAGIGRGTTFVP AAWPPTRFVFSRVPFG GNRNCQQ+  NDD + RADHN D  GDGLTALVGLSQG+ +M++ HGEQTERGYE D+Q  L G SV+A +T GI VQML+SPE  IG+EWENANSSISLDMKTPL+HFPPFRF+VEF DVHR+SD QV HSPEVFYAGSLWKVSVQAF DEDPQGRRTLGLFLHRRKAEI DPL+KVHMYVD+REKVTARYQLICPSKREVMV GS KQ GTLLPKAPKGWGWRTALLFDEL DLLQNGALR+AA+VQL+
Sbjct:   21 GDMEMRRQASQHSDNDRSSGELRALDCNLNSLCDHIQLEGFNNGSFSDVVVHAMGSAYHLHRLILSRSSYFRNMLHGPWKEANAPIVKLHVDDKNVNEEAIAMALAYLYGHHPKLDDNNAYRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQIFAEGQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSHTLHALLTSDELWVPSEEKRFELALYTFLAKSAFCKGEQPEEGSSSTEIEMRTHSDSPKVKGNNLIYSGTIKQLDCELGCVSLKDDIEGHNTARNIVVEPVSCVVGS-QIGVHVSKQQVQQDSCTESHLEPRHSCDIERLSSSSSYSFMDDVRSSCSYLEMPIGVGVTGLAGNGVAMEGPSEEGSCYQLNNNSWIDRDQRHCNSMNSSYNGFMPSEWGRCGLPPLSWGGRIVGRRQVKGSPEENCGVSGEDYNAFVNVFEAGSLLYCNMSFEALLNVRKHLEELGFPCKAVNDGLWLQMLLSQRVQEIGADTCKNCCLVNMACTCRPQFGFSHGATATGYYVQERDHNNQSSNIGNIYVTDSTQGEGNGLFRPVRVHVR--GAIDGLAGIGRGTTFVPGAAWPPTRFVFSRVPFGVGNRNCQQSPANDDLEARADHNGDLAGDGLTALVGLSQGL-NMANAHGEQTERGYEMDIQSRLAGPSVAAPSTSGIPVQMLESPEHTIGIEWENANSSISLDMKTPLNHFPPFRFAVEFQDVHRISDVQVMHSPEVFYAGSLWKVSVQAFKDEDPQGRRTLGLFLHRRKAEITDPLRKVHMYVDSREKVTARYQLICPSKREVMVIGSFKQTGTLLPKAPKGWGWRTALLFDELGDLLQNGALRVAAVVQLV 879
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6R0T1 ((Germ cell-less protein-like {ECO:0000313|EMBL:PSS18219.1}))

HSP 1 Score: 1278.08 bits (3306), Expect = 0.000e+0
Identity = 624/853 (73.15%), Postives = 706/853 (82.77%), Query Frame = 0
 
Query:   36 QHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            QHSDNDRS+      DCNLTSLCDH+QLEGFNNG+FSDVV+HAMGSTYHLHRLILSRSSYFRNMLHGPW+EANAP+++LHVDD NVN EAIA  LAYLYGHHPKL+D+NA+RVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQ+FAE QDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSS TLHALLTS+ELWVPSEEKRFELALYT + K A CK +  EEGS++ ++   T  +  K KG  +    +   LE ++G + + D  EG +T  N LVE   G +   +  +  SKQ  Q  +CT+S LEPR   + ER SS +S S+   +RS+CSYLE+P     + L   GVAMEGPSEEGSCYQ NNN+W+  +QR CN+MNSS +G M SEWGRC +PPLSWGGRIVGRR +K   +G CG+SGE+Y+AFVN+FE GSLLY NM+FEALLNVRK LEELGFP KAVND LWLQMLLSQRV EIGADTCKNCCLVSM CACR  +G+S G  ++GYY+QEHD +   SNIGN+YVTDS QGEG+GLFRPVRVHV   G  DGLAGIGRGTTFVP AA PPTRFVFSRVPFG GNRNCQQ+  NDD + RADHN D  GDGLTALVGLSQG+ ++++ HGEQTERGYE DLQ  L G  V+  +T GI VQML+SPE AIG+EWENANSSISLDMKTPL+HFPPFRF+VEF DVHR+SD QVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEI DPL+KVHMYVD+REKVTARYQLICPSKREVMV GS KQ GTLLPKAPKGWGWRTALLFDEL DLLQNGALR+AA+VQL+
Sbjct:   33 QHSDNDRSSGELRALDCNLTSLCDHIQLEGFNNGSFSDVVIHAMGSTYHLHRLILSRSSYFRNMLHGPWKEANAPIVTLHVDDKNVNAEAIAMTLAYLYGHHPKLDDNNAYRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQIFAEGQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSHTLHALLTSNELWVPSEEKRFELALYTFLVKSAFCKGKQPEEGSSSTEMEMRTHSDSPKVKGNNLNYSGTIKQLECELGCMSLNDDTEGHNTARNSLVE-PVGCVGGSQIGVHGSKQQVQQDSCTESHLEPRCSSDIERLSSSSSYSFMDNVRSSCSYLEMPIGVGVSGLAGGGVAMEGPSEEGSCYQLNNNSWIDRDQRHCNSMNSSYNGFMPSEWGRCGLPPLSWGGRIVGRRQVKGSPEGNCGVSGEEYNAFVNVFEAGSLLYCNMSFEALLNVRKHLEELGFPCKAVNDGLWLQMLLSQRVQEIGADTCKNCCLVSMSCACRPQFGFSHGDTATGYYVQEHDHNNQASNIGNIYVTDSTQGEGNGLFRPVRVHVR--GAIDGLAGIGRGTTFVPGAASPPTRFVFSRVPFGVGNRNCQQSNANDDLEARADHNGDLAGDGLTALVGLSQGL-NIANAHGEQTERGYEMDLQSRLAGPYVAGPSTSGIPVQMLESPEHAIGIEWENANSSISLDMKTPLNHFPPFRFAVEFQDVHRISDVQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDPLRKVHMYVDSREKVTARYQLICPSKREVMVIGSFKQTGTLLPKAPKGWGWRTALLFDELGDLLQNGALRVAAVVQLV 881
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EHM0 (BTB domain-containing protein {ECO:0000259|PROSITE:PS50097})

HSP 1 Score: 1272.3 bits (3291), Expect = 0.000e+0
Identity = 630/901 (69.92%), Postives = 719/901 (79.80%), Query Frame = 0
 
Query:   30 EMIARQQ------HS---DNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRT--LGLFLH--RRKAEINDPL-----------------------------KKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            EM+ RQQ      HS   DNDRS+      DCNLTSLCDHVQLEGFNNG+FSD++VHAM STY LHRLILSRSSYFRNMLHGPW+EANAP ++LH+DD NVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQDLCAICTDFIISELWTSNFL YQ+FAESQDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELWVPSEEKRFELALY  +AK + CK EH E+GS++ ++   T     K KGK ++   ++  LES++G + + D LEG +   N LVELA  V+ S +  +  S+Q  Q  +CT+S +EPR  CN ER SS NS SYT ++RS+CSYLE+P    A+ L  DG  MEGPSEEGSCYQ NNN+WL+ +QR CN++NSS +G M +EWGRC MPPLSWGGRIVGRR +K   KG CG+SGE+YD+FVNIFEGGSLLY NM+FEALLNVRK LEELGFP KA+ND LWLQMLLSQRV EI ADTCKNCCLVSM CACRQ +G+S G+ + GY +QEHD +    N+GN+YVTDS QGEG+GLFRPVRVHV   G  DGLAGIGRGTTFVPA AWPPTRFVFSRVP+G GNRNCQQ+L NDDS+ RADHN D  GDGLTALVGLSQGV +M++  G+QT+RGYETDLQ  L G SV+  +T GI+VQML+SPE  IG+EWENANSSISLDMKTPL+HFPPFRF+VEF DVHRLSDGQVKHSPEVFYAGSLWKVSV AFNDEDPQGRRT  LG F+    R  ++  PL                              +VHMY+D+REKVTARYQLICPSKREVMVFGSLKQ GTLLPKAPKGWGWR+ALLFDEL D LQNGALR+AA+VQL+
Sbjct:   20 EMMTRQQAASSQQHSNDNDNDRSSGELRALDCNLTSLCDHVQLEGFNNGSFSDILVHAMSSTYRLHRLILSRSSYFRNMLHGPWKEANAPTVTLHIDDKNVNGEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLEYQIFAESQDYGIHGERVRTACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWVPSEEKRFELALYAFLAKCSFCKGEHPEQGSSSSEMGTSTHSSSPKVKGKNLIDSGTNKQLESELGCMSLNDDLEGHNAAHNILVELADCVVDS-QTGVHSSRQQVQQGSCTKSHMEPRYHCNIERHSSSNSFSYTDDVRSSCSYLEMPIGIGASGLAGDGGVMEGPSEEGSCYQFNNNSWLSRDQRHCNSLNSSYNGFMPNEWGRCGMPPLSWGGRIVGRRQVKGYAKGNCGVSGEEYDSFVNIFEGGSLLYCNMSFEALLNVRKHLEELGFPCKAINDGLWLQMLLSQRVQEISADTCKNCCLVSMSCACRQQFGFSHGVSAPGYCVQEHDHNNQSGNMGNVYVTDSTQGEGNGLFRPVRVHVR--GAIDGLAGIGRGTTFVPATAWPPTRFVFSRVPYGMGNRNCQQSLANDDSEARADHNGDLTGDGLTALVGLSQGV-NMANAPGDQTDRGYETDLQSRLAGPSVAGPSTSGITVQMLESPEHTIGIEWENANSSISLDMKTPLNHFPPFRFAVEFQDVHRLSDGQVKHSPEVFYAGSLWKVSVHAFNDEDPQGRRTLELGYFVRMATRGGQVRAPLGDMGFGWVGIVMLFYFSELGYFVRMATRGGQVHMYMDSREKVTARYQLICPSKREVMVFGSLKQTGTLLPKAPKGWGWRSALLFDELGDFLQNGALRVAAVVQLV 916
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7IQY9 (BTB domain-containing protein {ECO:0000259|PROSITE:PS50097})

HSP 1 Score: 1266.14 bits (3275), Expect = 0.000e+0
Identity = 623/861 (72.36%), Postives = 707/861 (82.11%), Query Frame = 0
 
Query:   32 IARQQHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSY--TAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQ-RPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENAN-SSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            I   QHSDNDRS+      DCNLT+LCDH+Q+EGFN+G+FSD+VV AMGSTYHLHRLILSRSSYFRNMLH PW+EA APV++L VDD NVNG+AIA ALAYLYGHHPKLND NAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAE+QDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELW+PSEEKRFELALY L+AKG+ CK EH E+ S++ ++      +  K+KGK +    SS  LES++GRL + D LEG  T  N LVELA  V+       +  +Q++QA    Q  LE    CN  ++SS  S SY  T    S+CSY+E+P ++         +AMEGPSEE SCY  NNN+WL+ +Q + C++++SSCD IM ++WGRC MP LSWGGR+V RR +K   K  CG+ GEDYDAFVNIFEGGSLLY NM+FEALLNVRKQLEELGFP KAVND LWLQMLLSQRV E  ADTCKNCC  SM C CRQ +G+S G+ ++GYY+QEHDQ+ S  NIGN+YV DS QG+G+GLFRPVRVHV   GP DGLAGIGRGTTFVPAAAWPPTRFVFSRVPFG GNRNCQQ+L NDD++ R DHN D  GDGLTALVGLSQG S+  +VHGEQTERGYETDLQ  L G SV+  +   IS+QML+SPE AIG+EWENAN SSISLDMKTPLSHFPPFRF VEF++VHRLSDGQVKHSPE FYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEI D L+KVHMYVD+REKVTARYQLICPSKREVMVFGS KQRGTLLPKAPKGWGWRTALLFDEL+DLLQNG LR+AA+VQL+
Sbjct:   98 IPSSQHSDNDRSSSELRALDCNLTALCDHIQMEGFNSGSFSDIVVQAMGSTYHLHRLILSRSSYFRNMLHDPWKEATAPVVTLRVDDKNVNGDAIAMALAYLYGHHPKLNDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGAVELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALYPLLAKGSFCKTEHFEQESSSSEMGTGIHSDSCKAKGKNLTDSCSSKRLESEIGRLNITDDLEGHDTAHNLLVELADCVVDYQTGVSDSKQQVKQARY-AQPKLETVYPCNVNQSSSMGS-SYPDTDRATSSCSYVEMPGAS--------SMAMEGPSEESSCYHLNNNSWLSSDQSKHCSSVDSSCDTIMVNDWGRCGMPGLSWGGRVVDRRQVKGYAKANCGVRGEDYDAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQETVADTCKNCCRTSMACTCRQSFGFSHGVAATGYYMQEHDQNNSSGNIGNIYVADSTQGDGNGLFRPVRVHVR--GPIDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGMGNRNCQQSLANDDTEARTDHNGDLSGDGLTALVGLSQGGSNAGNVHGEQTERGYETDLQSRLSGTSVAGPSASDISMQMLESPEHAIGIEWENANGSSISLDMKTPLSHFPPFRFGVEFEEVHRLSDGQVKHSPEHFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDSLRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQRGTLLPKAPKGWGWRTALLFDELADLLQNGTLRVAAVVQLV 946
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P4BFG0 ((uncharacterized protein LOC107431401 isoform X1 {ECO:0000313|RefSeq:XP_015897778.1}))

HSP 1 Score: 1264.21 bits (3270), Expect = 0.000e+0
Identity = 629/877 (71.72%), Postives = 713/877 (81.30%), Query Frame = 0
 
Query:   21 QQLPRVFSGEM---IARQQHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEP-RSQCNNERTSS-KNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQ--RPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSS-VHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENAN-SSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            Q+  R F   M   I   QHSDNDRS+      DCNLTSLCDH+Q+EGFN+G FSD+VVHAMGSTYHLHRLILSRS YFRNMLHGPW+EANAPVL+LHVDD NVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYG+HGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELWVP EEKRFELALYT +AKGA CK E  E+GS + +    +  +   +KGK ++       LE+++G L +KD  EG +T  N LVEL   V+   R      KQ+QQ  A  QS LE     CN   +SS  NS S T   R++C Y E+P S   + L  + +A EGPS+EGSCY  NN++WL+ +     C+AMNSS + ++S++WGRC MPP+SWGGR+VGRR LK   KG  G+ GEDYDAFVNIFE GSLLY NM+FEALLN RKQLEELGFP KAVND LWLQMLLSQRV EIGADTCK+CCL+SM C CRQP+G++ G+ +SGYY+QEHDQ+ SPSN+GN+YV +SA G+G+GLFRPVRVH+   GP DGLAGIGRG+TFVPAAAWPPTRFVFSRVPFG GNRNCQQ+  NDDS+ RADHN D  GDGLTALVGLSQG  S S+ ++GEQT RGYE DLQ  + G S+S  +T  I VQML+S E AIGVEWENAN SSISLDMKTPLSHFPPFRF V+F+DVHRLSDGQVKHSPEVFYAGS WKVSVQAFNDEDPQGRRTLGLFLHRRKAEI D L+KVHMYVD+REKVTARYQLICPSKREVMVFGS KQ GTLLPKAPKGWGWRTALLFDEL+DLLQNGALR+AA+VQL+
Sbjct:   12 QKPSRSFGPHMKITIQPSQHSDNDRSSGELRALDCNLTSLCDHIQIEGFNSGAFSDIVVHAMGSTYHLHRLILSRSPYFRNMLHGPWKEANAPVLTLHVDDKNVNGEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGLHGERVRNACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWVPGEEKRFELALYTFLAKGALCKQEQSEQGSTSSEAGMDSHSDSLSAKGKNLIGSFIEKRLETELGHLTLKDDSEGHNTARNLLVELTDCVVDFQRGVSNSKKQVQQG-AYPQSKLEAGYPPCNIGGSSSLTNSFSGTDATRTSCPYAEMPISVGGSGLGANDMAQEGPSDEGSCYHLNNHSWLSRDDHLENCSAMNSSSNELLSNDWGRCGMPPISWGGRVVGRRQLKGQAKGNPGVRGEDYDAFVNIFEAGSLLYCNMSFEALLNARKQLEELGFPCKAVNDGLWLQMLLSQRVQEIGADTCKSCCLMSMACVCRQPFGFTHGVATSGYYMQEHDQNNSPSNMGNVYVAESAPGDGNGLFRPVRVHIR--GPIDGLAGIGRGSTFVPAAAWPPTRFVFSRVPFGMGNRNCQQSPANDDSEARADHNGDLSGDGLTALVGLSQGGGSNSANINGEQTVRGYEMDLQNRISGTSMSGPSTSSIPVQMLESSENAIGVEWENANSSSISLDMKTPLSHFPPFRFGVQFEDVHRLSDGQVKHSPEVFYAGSFWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDSLRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVAAVVQLV 885
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GL83 (BTB domain-containing protein {ECO:0000259|PROSITE:PS50097})

HSP 1 Score: 1260.36 bits (3260), Expect = 0.000e+0
Identity = 620/868 (71.43%), Postives = 705/868 (81.22%), Query Frame = 0
 
Query:   30 EMIARQQ------HS---DNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIHSCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAEMRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQRPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENANSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            EM+ RQQ      HS   DNDRS+      DCNLTSLCDHVQLEGFNNG+FSD++VHAM STY LHRLILSRSSYFRNMLHGPW+EANAP ++LH+DD NVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQ                       +FAESQDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELWVPSEEKRFELALYT +AK + CK EH E+GS++ ++   T     K KGK ++   ++  LES++G + + D LEG +   N LVELA  V+ S +  +  S+Q  Q  +CT+S +EPR  CN ER SS NS SYT ++RS+CSYLE+P    A+ L  DG  MEGPSEEGSCYQ NNN+WL+ +QR CN++NSS +G M +EWGRC MPPLSWGGRIVGRR +K   KG CG+SGE+YD+FVNIFEGGSLLY NM+FEALLNVRK LEELGFP KA+ND LWLQMLLSQRV EI ADTCKNCCLVSM CACRQ +G+S G+ + GY +QEHD +    N+GN+YVTDS QGEG+GLFRPVRVHV   G  DGLAGIGRGTTFVPA AWPPTRFVFSRVP+G GNRNCQQ+L NDDS+ RADHN D  GDGLTALVGLSQGV +M++  G+QT+RGYETDLQ  L G SV+  +T GI+VQML+SPE  IG+EWENANSSISLDMKTPL+HFPPFRF+VEF DVHRLSDGQVKHSPEVFYAGSLWKVSV AFNDEDPQGRRTLGLFLHRRKAEI DPL+KVHMYVD+REKVTARYQLICPSKREVMVFGSLKQ GTLLPKAPKGWGWR+ALLFDEL D LQNGALR+AA+VQL+
Sbjct:   20 EMMTRQQAASSQQHSNDNDNDRSSGELRALDCNLTSLCDHVQLEGFNNGSFSDILVHAMSSTYRLHRLILSRSSYFRNMLHGPWKEANAPTVTLHIDDKNVNGEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQ-----------------------IFAESQDYGIHGERVRTACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTFLAKCSFCKGEHPEQGSSSSEMGTSTHSSSPKVKGKNLIDSGTNKQLESELGCMSLNDDLEGHNAAHNILVELADCVVDS-QTGVHSSRQQVQQGSCTKSHMEPRYHCNIERHSSSNSFSYTDDVRSSCSYLEMPIGIGASGLSGDGGVMEGPSEEGSCYQFNNNSWLSRDQRHCNSLNSSYNGFMPNEWGRCGMPPLSWGGRIVGRRQVKGYAKGNCGVSGEEYDSFVNIFEGGSLLYCNMSFEALLNVRKHLEELGFPCKAINDGLWLQMLLSQRVQEISADTCKNCCLVSMSCACRQQFGFSHGVSAPGYCVQEHDHNNQSGNMGNVYVTDSTQGEGNGLFRPVRVHVR--GAIDGLAGIGRGTTFVPATAWPPTRFVFSRVPYGMGNRNCQQSLANDDSEARADHNGDLTGDGLTALVGLSQGV-NMANAPGDQTDRGYETDLQSRLAGPSVAGPSTSGITVQMLESPEHTIGIEWENANSSISLDMKTPLNHFPPFRFAVEFQDVHRLSDGQVKHSPEVFYAGSLWKVSVHAFNDEDPQGRRTLGLFLHRRKAEITDPLRKVHMYVDSREKVTARYQLICPSKREVMVFGSLKQTGTLLPKAPKGWGWRSALLFDELGDFLQNGALRVAAVVQLV 860
[Close]
BLAST of XM_017367808.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EQ91 ((BTB/POZ domain-containing protein isoform 1 {ECO:0000313|EMBL:EOY06522.1}))

HSP 1 Score: 1260.36 bits (3260), Expect = 0.000e+0
Identity = 626/890 (70.34%), Postives = 722/890 (81.12%), Query Frame = 0
 
Query:    7 QFPRHHNHHHHNHNQQLPRVFSGEMIARQQHSDNDRSN------DCNLTSLCDHVQLEGFNNGTFSDVVVHAMGSTYHLHRLILSRSSYFRNMLHGPWREANAPVLSLHVDDNNVNGEAIATALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRSACWGYLCQSGALELREVLPKLSSQTLHALLTSDELWVPSEEKRFELALYTLVAKGAPCKAEHGEEGSANPDIVPHTSFEYQKSKGKEVVSDSSSIILESDMGRLRVKDQLEGESTPGNDLVELAKGVIH-----SCREQLEPSKQLQQASACTQSTLEPRSQCNNERTSSKNSCSYTAE-MRSNCSYLEVPTSARANLLCNDGVAMEGPSEEGSCYQSNNNNWLTGEQ-RPCNAMNSSCDGIMSSEWGRCSMPPLSWGGRIVGRRDLKTCVKGICGLSGEDYDAFVNIFEGGSLLYSNMTFEALLNVRKQLEELGFPGKAVNDSLWLQMLLSQRVLEIGADTCKNCCLVSMVCACRQPYGYSRGIPSSGYYIQEHDQHISPSNIGNLYVTDSAQGEGSGLFRPVRVHVNRGGPNDGLAGIGRGTTFVPAAAWPPTRFVFSRVPFGAGNRNCQQTLGNDDSDNRADHNADGVGDGLTALVGLSQGVSSMSSVHGEQTERGYETDLQGGLIGHSVSASTTPGISVQMLDSPEQAIGVEWENA-NSSISLDMKTPLSHFPPFRFSVEFDDVHRLSDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDPLKKVHMYVDTREKVTARYQLICPSKREVMVFGSLKQRGTLLPKAPKGWGWRTALLFDELSDLLQNGALRIAAIVQLI 882
            QF R  ++    H QQ  +     +    QHSDNDRS+      DCNL SLC+H+Q+EGFN G+FSD+VV+AMGSTYHLHRLILSRSSYFRNMLHGPW+EA AP+++L+VDDNNVNGEAIA ALAYLYGHHPKLND+NAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVR+ACWGYLCQSGA+EL+EVLPKLSSQTLHALLTSDELWV SEEKRFELAL+TL++KGA  K EH ++GS++P++      E  K+KGK++V       LES++G L +K  LE  +   N LVEL + ++      S  E+  P  +  Q+        EP   CN +++SS N+    AE +R++CSY+E+P     + L   G+AMEGPSEEGSCY  NN+NWL  +Q R C++++SSC GIM ++WGRC M  LSWGGR+VG+R +K+  KG CG+ GE+YDAFVNIFEGGSLLY NM+FE LLNVRKQLEELGFP KAVND LWLQMLLSQRV E+GADTCKNCCL SM CACRQP+G+  G+ ++GYY+QEHDQ+    NIGN+YV D+ QGEGSGLFRPVRVHV   GP DGLAGIGRG TFVPAAAWPPTRFVFSRVPFG GNRN QQ+L NDDS+ RADHN D  G GLTALV LSQG S+ ++VHGEQTER YETDLQ  +   S +A  T GI+VQML+SPE AIG+EWENA +SSISLDMKTPLSHFPPFRF VEF+DVHRL DGQVKHSPE FYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEI D L+KVHMYVD+REKVTARYQLICPSKREVMVFGS KQRGTLLPKAPKGWGWRTALLFDEL+DLLQNGALR+AA+VQL+
Sbjct:    4 QFSRPRSYGPPTHQQQQQQQLKMTIPPLPQHSDNDRSSSELRAVDCNLNSLCEHIQMEGFNGGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEAKAPMVTLNVDDNNVNGEAIAIALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRNACWGYLCQSGAMELKEVLPKLSSQTLHALLTSDELWVHSEEKRFELALHTLLSKGAFYKTEHSDQGSSSPEMAIGIPPESSKAKGKDLVDSCPGKRLESELGCLSLKGDLEHCNAAQNLLVELTECMVDIQTGVSSSEKQVPQPKYPQS--------EPIYPCNMDQSSSMNNSFSDAEGIRTSCSYVEMPIGVGTSGLGASGMAMEGPSEEGSCYHLNNDNWLASDQSRNCSSVDSSCSGIMLNDWGRCGMASLSWGGRVVGKRQVKSYAKGNCGIRGEEYDAFVNIFEGGSLLYCNMSFEELLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEVGADTCKNCCLTSMQCACRQPFGFPHGVATTGYYVQEHDQNHLTGNIGNVYVADNNQGEGSGLFRPVRVHVR--GPIDGLAGIGRGATFVPAAAWPPTRFVFSRVPFGMGNRNGQQSLPNDDSEARADHNGDMSGGGLTALVELSQGGSNATNVHGEQTERSYETDLQSRVPVTSAAAPATSGIAVQMLESPEHAIGIEWENATSSSISLDMKTPLSHFPPFRFGVEFEDVHRLGDGQVKHSPEFFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDSLRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQRGTLLPKAPKGWGWRTALLFDELADLLQNGALRVAAVVQLV 883
Match NameStatsDescription
A0A5B7A3R8E-Value: 0.000e+0, PID: 77.02BTB domain-containing protein {ECO:0000259|PROSITE... [more]
A0A5B7A3I3E-Value: 0.000e+0, PID: 76.55BTB domain-containing protein {ECO:0000259|PROSITE... [more]
A0A5J5C0Z4E-Value: 0.000e+0, PID: 76.23BTB domain-containing protein {ECO:0000259|PROSITE... [more]
A0A2R6PK29E-Value: 0.000e+0, PID: 72.89(Germ cell-less protein-like {ECO:0000313|EMBL:PSR... [more]
A0A2R6R0T1E-Value: 0.000e+0, PID: 73.15(Germ cell-less protein-like {ECO:0000313|EMBL:PSS... [more]
A0A4S4EHM0E-Value: 0.000e+0, PID: 69.92BTB domain-containing protein {ECO:0000259|PROSITE... [more]
A0A5C7IQY9E-Value: 0.000e+0, PID: 72.36BTB domain-containing protein {ECO:0000259|PROSITE... [more]
A0A6P4BFG0E-Value: 0.000e+0, PID: 71.72(uncharacterized protein LOC107431401 isoform X1 {... [more]
A0A7J7GL83E-Value: 0.000e+0, PID: 71.43BTB domain-containing protein {ECO:0000259|PROSITE... [more]
A0A061EQ91E-Value: 0.000e+0, PID: 70.34(BTB/POZ domain-containing protein isoform 1 {ECO:... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.